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Filter Cart

The Filter Cart provides a powerful way to query and access data for which you may be interested.  

A few points related to the filter cart are important to understand with the NDA Query/Filter implementation: 

First, the filter cart is populated asyncronously.  So, when you run a query, it may take a moment to populate but this will happen in the background so you can define other queries during this time.  

When you are adding your first filter, all data associated with your query will be added to the filter cart (whether it be a collection, a concept, a study, a data structure/elment or subjects). Not all data structures or collections will necessarily be displayed.  For example, if you select the NDA imaging structure image03, and further restrict that query to scan_type fMRI, only fMRI images will appear and only the image03 structure will be shown.  To see other data structures, select "Find All Subject Data" which will query all data for those subjects. When a secord or third filter is applied, an AND condition is used.  A subject must exist in all filters.  If the subject does not appear in any one filter, that subjects data will not be included in your filter cart. If that happens, clear your filter cart, and start over.  

It is best to package more data than you need and access those data using other tools, independent of the NDA (e.g. miNDAR snapshot), to limit the data selected.  If you have any questions on data access, are interested in using avaialble web services, or need help accessing data, please contact us for assistance.  

Frequently Asked Questions

Glossary

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NDA provides a single access to de-identified autism research data. For permission to download data, you will need an NDA account with approved access to NDA or a connected repository (AGRE, IAN, or the ATP). For NDA access, you need to be a research investigator sponsored by an NIH recognized institution with federal wide assurance. See Request Access for more information.

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Blood Sample Collection

702 Shared Subjects

N/A
Clinical Assessments
Summary
09/25/2015
bsc01
09/23/2019
View Change History
01
Query Element Name Data Type Size Required Description Value Range Notes Aliases
subjectkey GUID Required The NDAR Global Unique Identifier (GUID) for research subject NDAR* guid, nimhid
src_subject_id String 20 Required Subject ID how it's defined in lab/project hcpa_id, ptid, subject, subject_id
interview_date Date Required Date on which the interview/genetic test/sampling/imaging/biospecimen was completed. MM/DD/YYYY Required field bldcldt, intvdate, testdate
interview_age Integer Required Age in months at the time of the interview/test/sampling/imaging. 0 :: 1260 Age is rounded to chronological month. If the research participant is 15-days-old at time of interview, the appropriate value would be 0 months. If the participant is 16-days-old, the value would be 1 month. age, intvage
sex String 20 Required Sex of the subject M;F M = Male; F = Female gender
Query site String 101 Recommended Site Study Site siteid
Query study String 100 Recommended Study studyid
Query daysrz Integer Recommended days since randomization datecollect, studyday
Query completed Integer Recommended Checks if completed 0::3 0=No; 1=Yes; 2=Yes, lost; 3=Unverified bldclst, formcomp
Query sitedatasource_1 Integer Recommended Source of Data: Site 0;1; -888; -999 0=False; 1=True; -888=Not Applicable; -999=Missing; infosrcr
Query sitedatasource_phone Integer Recommended Source of Data: Telephone 0;1; -888; -999 0=False; 1=True; -888=Not Applicable; -999=Missing; infosrct
Query sitedatasource_physician Integer Recommended Source of Data: Physician 0;1; -888; -999 0=False; 1=True; -888=Not Applicable; -999=Missing; infosrcp
Query visit String 50 Recommended Visit name interval, visit_name, visitnum
version_form String 100 Recommended Form used/assessment name bscpg, form_name
Query bsctot Integer Recommended Total number of forms 1::99
Query ldosedy Integer Recommended Day of last dose Number of days from study baseline to date of last dose datelast
ldosetm String 10 Recommended Time of last dose lasttime
Query bsc_q01 Integer Recommended Any blood drawn
1;2
1= Yes, 2=No; blood, pom001, pom002
Query drawdays Integer Recommended blood draw days since consent bsc_q02, drawdate
drawtime String 20 Recommended time of blood draw bsc_q03, pom001a, pom002a, timecollect
Query bsc_q04 Integer Recommended Consume 70-gm carbohydrates 1;2 1= Yes, 2=No;
lmealtm String 10 Recommended Time of last meal bld_core_snacktime, bsc_q05, mealtime
Query lmealdy Integer Recommended Day of last meal Number of days from study baseline to date of last meal
Query bsc_q06a Float Recommended First food grams 0::99
Query bsc_q06b Float Recommended Second food grams 0::99
Query bsc_q06c Float Recommended Third food grams 0::99
Query mefa3 Integer Recommended Is the patient taking Risperidone? (Y/N) (If the patient is taking more than one anti-psychotic, the patient is ineligible.) 0;1;999 0=No; 1=Yes; 999=Legitimately skipped bsc_q07
Query adl_q03 Integer Recommended Date of last study med taken in days from the randomization date (ADL_Q03 = Date of last dose of study medication - randomization date) -888=NA bsc_q08
Query sma005 String 20 Recommended Time of last dose of study medication (hh:mm, 24-hour clock) bsc_q09
Query bsc_q10a Integer Recommended Blood collected for Risperidone 1;2 1= Yes, 2=No;
Query bsc_q10b Integer Recommended Blood collected for prolactin 1;2 1= Yes, 2=No;
Query bsc_q10c Integer Recommended Blood collected for glucose 1;2 1= Yes, 2=No;
Query bsc_q10d Integer Recommended Blood collected for hgbA1c 1;2 1= Yes, 2=No;
Query bsc_q10e Integer Recommended Blood collected for triglycerides 1;2 1= Yes, 2=No;
Query bsc_q10f Integer Recommended Blood collected for total cholesterol 1;2 1= Yes, 2=No;
Query bsc_q10g Integer Recommended Blood collected for LDL 1;2 1= Yes, 2=No;
Query bsc_q10h Integer Recommended Blood collected for HDL 1;2 1= Yes, 2=No;
Query leptin Float Recommended Leptin blood test result leptin_unit" specifies unit
leptin_unit String 10 Recommended Unit for the leptin blood test result
Query ci_enrolled Integer Recommended Participant enrolled 0;1 0=No; 1=Yes
Query ptcon Integer Recommended Patient consented 0;1 0=No; 1=Yes bldcnsnt
comments String 4,000 Recommended Comments about assessment blood_notes, ldl_notes, notes
Query med2b Integer Recommended Visit Day Number of days from study baseline to date of visit
Query visnum Float Recommended Numeric Visit Number -1.5 = Pre-Screening; -1 = Screening; 0 = Baseline; ## = Visit ## (from 1 to 10); Whole numbers = standard monthly visits; #.001 - #.009 = Unscheduled; #.1 = End of Phase 1; #.2 = End of Phase 2; #.3 = End of Phase 3; #.4 = End of Open Choice Phase; #.5 = End of Study; #.6 = Genetic Analysis; 1000=all visits
Query hypforin Float Recommended Plasma assay: hyperforin
Query sertra Float Recommended Plasma assay: sertraline
Query dmsertra Float Recommended Plasma assay: N-desmethyl-sertraline
Query tx_num Integer Recommended Medication Code Number 1::3 1 = Sertraline; 2 = Hypericum; 3 = Placebo
Query bsc_q10hh Integer Recommended Blood collected for Interleukin-6 1; 2 1= Yes, 2=No
Query bsc_q10i Integer Recommended Blood collected for LH 1; 2 1= Yes, 2=No
Query bsc_q10j Integer Recommended Blood collected for FSH 1; 2 1= Yes, 2=No
Query bsc_q10k Integer Recommended Blood collected for TSH 1; 2 1= Yes, 2=No
Query bsc_q10l Integer Recommended Blood collected for ACTH 1; 2 1= Yes, 2=No
Query bsc_q10m Integer Recommended Blood collected for Progesterone 1; 2 1= Yes, 2=No
Query bsc_q10n Integer Recommended Blood collected for Estradiol 1; 2 1= Yes, 2=No
Query bsc_q10o Integer Recommended Blood collected for Testosterone 1; 2 1= Yes, 2=No
Query bsc_q10p Integer Recommended Blood collected for SHBG 1; 2 1= Yes, 2=No
Query bsc_q10q Integer Recommended Blood collected for DHEA-S 1; 2 1= Yes, 2=No
Query interleukin6 Float Recommended Interleukin-6 blood test result interleukin-6
interleukin6_unit String 10 Recommended Unit for the Interleukin-6 blood test result interleukin-6_unit
Query lh Float Recommended LH blood test result
lh_unit String 10 Recommended Unit for the LH blood test result
Query fsh Float Recommended FSH blood test result
fsh_unit String 10 Recommended Unit for the FSH blood test result
Query tsh Float Recommended TSH 0::99.99;-7;-8;-9;999 In microIU/mL. -7 = Don't know; -8 = Refused to answer; -9 = Does not apply
tsh_unit String 10 Recommended Unit for the TSH blood test result
Query acth Float Recommended ACTH blood test result
acth_unit String 10 Recommended Unit for the ACTH blood test result
Query fprgrs Float Recommended Hormonal Measures Female Progesterone Results progesterone
progesterone_unit String 10 Recommended Unit for the Progesterone blood test result
Query festrs Float Recommended Hormonal Measures Female Estradiol Results estradiol
estradiol_unit String 10 Recommended Unit for the Estradiol blood test result
Query rsptest_no Float Recommended Blood value - Testosterone (ng/dL) testosterone
testosterone_unit String 10 Recommended Unit for the Testosterone blood test result
Query shbg Float Recommended SHBG blood test result
shbg_unit String 10 Recommended Unit for the SHBG blood test result
Query dheas_mean_pgml Float Recommended dheas Mean (pg/mL) dhea-s
dhea_s_unit String 10 Recommended Unit for the DHEA-S blood test result dhea-s_unit
ls_alt Integer Recommended 16. ALT(SGPT)(U/L) -9=Unknown; -1=Normal; -2= <15 alt_sgpt
biospc_8 Integer Recommended Number of Purple tubes collected bld_core_ppl
fasting Integer Recommended fasting blood draw y/n 0;1;-7 0=No; 1=Yes; -7=Refused bld_core_fast
rsptc_no Float Recommended Blood value - Total Cholesterol (mg/dL) -9=Unknown cholesterol
rsptrig_no Float Recommended Blood value - Triglycerides (mg/dL) -9=Unknown triglyceride
ls_ureanitrogen Float Recommended 10. Urea Nitrogen(mg/dL) 0 :: 70; -9 -9=unknown ureanitrogen
ls_totprotein Float Recommended 11. Total Protein(g/dL) 0 :: 20.0; -9 -9=Unknown totalprotein
ls_co2 Float Recommended 7. CO2 Content(mmol/L) 0 :: 50;-9 -9=Unknown co2content
ls_calcium Float Recommended 17. Calcium(mg/dL) 0 :: 100.0; -9 -9=Unknown calcium
ls_bilirubin Float Recommended 13. Bilirubin, Total(mg/dL) 0 :: 9.9; -9 -9=Unknown totalbilirubin
ls_albumin Float Recommended 12. Albumin(g/dL) 0 :: 20.0;-9 -9=Unknown albumin
laba8 Float Recommended Hscrp hscrp
laba5 Float Recommended Hdl Cholesterol (Mg/Dl) -9=Unknown hdl
bp1_alk Float Recommended Liver ALK Phos -9=Unknown alkphos_total
a1crs Float Recommended HbA1c Results hba1c
biospc2_purple_tubes Float Recommended num of purple tubes collected sample 2 bld_rucdr_ppl
bld_core Integer Recommended CORE Blood Collected? 0;1 1 = Yes ; 0 = No
bld_core_grn Integer Recommended CORE: Number of Tubes Collected: Green Tubes
bld_core_snack Integer Recommended Fasting: Time of last meal/snack 0;1 1 = Same day ; 0 = Prior day
bld_core_spin Integer Recommended Spin at 1000 - 1300G for 10 mins 0;1 1 = Yes ; 0 = No
insomm String 250 Recommended Insulin: Comments insulin
bld_core_d2ph Integer Recommended All Tubes Time from Draw to Processing: Hour(s):
bld_core_d2pm Integer Recommended All Tubes Time from Draw to Processing: Minute(s):
bld_core_p2fh Integer Recommended All Tubes Time from Processing to Freezing: Hour(s):
bld_core_p2fm Integer Recommended All Tubes Time from Processing to Freezing: Minute(s):
bld_rucdr Integer Recommended RUCDR Blood Collected?: 0;1 1 = Yes ; 0 = No
friedewald_ldl Float Recommended Friedewald LDL Cholesterol: 99999 for QNS(quantity not sufficient); Units=mg/dL
laba6 Integer Recommended Ldl Cholesterol (Mg/Dl) -9=Unknown; -1=Normal ldl
biospc_6 Integer Recommended Number of Yellow tubes collected bld_rucdr_grn, bld_rucdr_ylw
vitdlev Integer Recommended 25- vitamin D level (ng/mL) vitamind
ed1_saliva Integer Recommended SALIVA SAMPLE COLLECTED 0; 1; -5; -7; -8 0=No; 1=Yes -8=DON'T KNOW; -7=REFUSED; -5=Presented, not answered bld_rucdr_saliva
ed1_blood Integer Recommended BLOOD SAMPLES COLLECTED 0; 1; -5; -7; -8 0=No; 1=Yes -8=DON'T KNOW; -7=REFUSED; -5=Presented, not answered bld_draw
ls_ast Integer Recommended 15. AST(SGOT)(U/L) -9=Unknown; -1=Normal ast_sgot
Data Structure

This page displays the data structure defined for the measure identified in the title and structure short name. The table below displays a list of data elements in this structure (also called variables) and the following information:

  • Element Name: This is the standard element name
  • Data Type: Which type of data this element is, e.g. String, Float, File location.
  • Size: If applicable, the character limit of this element
  • Required: This column displays whether the element is Required for valid submissions, Recommended for valid submissions, Conditional on other elements, or Optional
  • Description: A basic description
  • Value Range: Which values can appear validly in this element (case sensitive for strings)
  • Notes: Expanded description or notes on coding of values
  • Aliases: A list of currently supported Aliases (alternate element names)
  • For valid elements with shared data, on the far left is a Filter button you can use to view a summary of shared data for that element and apply a query filter to your Cart based on selected value ranges

At the top of this page you can also:

  • Use the search bar to filter the elements displayed. This will not filter on the Size of Required columns
  • Download a copy of this definition in CSV format
  • Download a blank CSV submission template prepopulated with the correct structure header rows ready to fill with subject records and upload

Please email the The NDA Help Desk with any questions.