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Filter Cart
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NDA Help Center

Filter Cart

Viewable at the top right of NDA pages, the Filter Cart is a temporary holder for filters and data they select. Filters are added to the Workspace first, before being submitted to The Filter Cart. Data selected by filters in the Filter Cart can be added to a Data Package or an NDA Study from the Data Packaging Page, by clicking the 'Create Data Package / Add Data to Study' button.

The filter cart supports combining multiple filters together, and depending on filter type will use "AND" or "OR" when combining filters.

Multiple selections from the same filter type will result in those selections being applied with an ‘OR’ condition. For example, if you add an NDA Collection Filter with selections for both collections 2112 and 2563 to an empty Workspace, the subjects from NDA Collection 2112 ‘OR’ NDA Collection 2563 will be added to your Workspace even if a subject is in both NDA Collections. You can then add other NDA Collections to your Workspace which further extends the ‘OR’ condition.

If a different filter type is added to your Workspace, or a filter has already been submitted to the Filter Cart, the operation then performs a logical ‘AND’ operation. This means that given the subjects returned from the first filter, only those subjects that matched the first filter are returned by the second filter (i.e., subjects that satisfied both filters).

When combining other filters with the GUID filter, please note the GUID filter should be added last. Otherwise, preselected data may be lost. For example, a predefined filter from Featured Datasets may select a subset of data available for a subject. When combined with a GUID filter for the same subject, the filter cart will contain all data available from that subject, data structure, and dataset; this may be more data than was selected in the predefined filter for that subject. Again, you should add the GUID Filter as the last filter to your cart. This ensures 'AND' logic between filters and will limit results to the subjects, data structures, and datasets already included in your filter cart.

Note that only the subjects specific to your filter will be added to your Filter Cart and only on data shared with the research community. Other data for those same subjects may exist (i.e., within another NDA Collection, associated with a data structure that was not requested in the query, etc.). So, users should select ‘Find all Subjects Data’ to identify all data for those specific subjects.

Additional Tips:

  • You may query the data without an account, but to gain access you will need to create an NDA user account and apply for access. Most data access requires that you or your lab are sponsored by an NIH recognized institution with Federal Wide Assurance (FWA). Without access, you will not be able to obtain individual-level data.

Once you have selected data of interest you can:

  • Create a data package - This allows you to specify format for access/download
  • Assign to Study Cohort - Associate the data to an NDA Study allowing for a DOI to be generated and the data to be linked directly to a finding, publication, or data release.
  • Find All Subject Data - Depending on filter types being used, not all data associated with a subject will be selected. Data may be restricted by data structure, NDA Collection, or outcome variables (e.g., NDA Study). ‘Find All Data’ expands the filter criteria by replacing all filters in your Filter Cart with a single Query by GUID filter for all subjects selected by those filters.

Please Note:

  • When running a query, it may take a moment to populate the Filter Cart. Queries happen in the background so you can define other queries during this time.
  • When you add your first filter, all data associated with your query will be added to the Filter Cart (e.g., a Concept, an NDA Collection, a Data Structure/Element, etc.). As you add additional filters, they will also display in the Filter Cart. Only the name of filter will be shown in the Filter Cart, not the underlying structures.
  • Information about the contents of the Filter Cart can be seen by clicking "Edit”.
  • Once your results appear in the Filter Cart, you can create a data package or assign subjects to a study by selecting the 'Package/Assign to Study' option. You can also 'Edit' or 'Clear' filters.

Frequently Asked Questions

  • What is a Filter Cart?
    Viewable at the top right of NDA pages, the Filter Cart is a temporary holder of data identified by the user, through querying or browsing, as being of some potential interest. The Filter Cart is where you send the data from your Workspace after it has been filtered.
  • What do I do after filters are added to the Filter Cart?
    After filters are added to the Filter Cart, users have options to ‘Create a Package’ for download, ‘Associate to Study Cohort’, or ‘Find All Subject Data’. Selecting ‘Find All Subject Data’ identifies and pulls all data for the subjects into the Filter Cart. Choosing ‘Create a Package’ allows users to package and name their query information for download. Choosing ‘Associate to Study Cohort’ gives users the opportunity to choose the Study Cohort they wish to associate this data.
  • Are there limitations on the amount of data a user can download?

    NDA limits the rate at which individual users can transfer data out of Amazon Web Services (AWS) S3 Object storage to non-AWS internet addresses. All users have a download limit of 20 Terabytes. This limit applies to the volume of data an individual user can transfer within a 30-day window. Only downloads to non-AWS internet addresses will be counted against the limit.

  • How does Filter Cart Boolean logic work?

    The Filter Cart currently employs basic AND/OR Boolean logic. A single filter may contain multiple selections for that filter type, e.g., a single NDA Study filter might contain NDA Study 1 and NDA Study 2. A subject that is in EITHER 1 OR 2 will be returned. Adding multiple filters to the cart, regardless of type, will AND the result of each filter. If NDA Study 1 and NDA Study 2 are added as individual filters, data for a subject will only be selected if the subject is included in BOTH 1 AND 2.

    When combining other filters with the GUID filter, please note the GUID filter should be added last. Otherwise, preselected data may be lost. For example, a predefined filter from Featured Datasets may select a subset of data available for a subject. When combined with a GUID filter for the same subject, the filter cart will contain all data available from that subject, data structure, and dataset; this may be more data than was selected in the predefined filter for that subject. Again, you should add the GUID Filter as the last filter to your cart. This ensures 'AND' logic between filters and will limit results to the subjects, data structures, and datasets already included in your filter cart.

Glossary

  • Workspace
    The Workspace within the General Query Tool is a holding area where you can review your pending filters prior to adding them to Filter Cart. Therefore, the first step in accessing data is to select one or more items and move it into the Workspace.
  • Filter Cart
    Viewable at the top right of NDA pages, the Filter Cart is a temporary holder of data identified by the user through querying or browsing as being of some potential interest. The Filter Cart adds data using an AND condition. The opportunity to further refine data to determine what will be downloaded or sent to a miNDAR is available on the Data Packaging Page, the next step after the Filter Cart. Subsequent access to data is restricted by User Permission or Privilege; however Filter Cart use is not.

Clinical Lab Tests Part II

580 Shared Subjects

N/A
Clinical Assessments
Phys Exam
04/17/2018
clinlabtestsp201
01/31/2024
View Change History
01
Query Element Name Data Type Size Required Description Value Range Notes Aliases
subjectkey GUID Required The NDAR Global Unique Identifier (GUID) for research subject NDAR* guid
src_subject_id String 20 Required Subject ID how it's defined in lab/project subject_id
interview_date Date Required Date on which the interview/genetic test/sampling/imaging/biospecimen was completed. MM/DD/YYYY chrcbc_interview_date, date_rna_collected, intvdate, v1_lab_date, visit_date_lith_levels
interview_age Integer Required Age in months at the time of the interview/test/sampling/imaging. 0 :: 1260 Age is rounded to chronological month. If the research participant is 15-days-old at time of interview, the appropriate value would be 0 months. If the participant is 16-days-old, the value would be 1 month. intvage
sex String 20 Required Sex of subject at birth M;F; O; NR M = Male; F = Female; O=Other; NR = Not reported gender
Query v1_lab_hepbscreen Integer Recommended Lab results Hepatitis B screen 0 :: 1 0 = negative; 1 = positive
Query v1_lab_hepcscreen Integer Recommended Lab results Hepatitis C screen 0 :: 1 0 = negative; 1 = positive
maf_end_date Date Recommended date of last dose taken avl002
ldosetm String 10 Recommended Time of last dose avl003
Query visit String 60 Recommended Visit name
Query positive_drugs1 Integer Recommended Positive for Cotinine 0 :: 1 0 = No; 1 = Yes cot002
Query cot02a Float Recommended Cotinine level (ng/mL) -9 = Unknown
hbsag String 25 Recommended hepatitis B surface antigen test results HBsAg hep003
Query strf_03 Integer Recommended Checks lab test Hepatitis LFT 0;1 0=No; 1=Yes hep001
Query hep004 Integer Recommended HCV test result
1;2;-9
1 = Positive; 2 = Negative; -9 = Equivocal
Query cmp_screening Integer Recommended CMP collected? 1;2 1= Yes; 2= No
Query egfraa_screening Integer Recommended eGFR-African American (Baseline) 1;2 1= Normal; 2= Abnormal
Query egfr_all_races_screening Integer Recommended eGFR-All Other Races (Baseline) 1;2 1= Normal; 2= Abnormal
Query hcg_screening Integer Recommended HCG Quantitative Collected? 1::3 1= Yes; 2= No; 3= N/A, subject is male
ekg_comments_screening String 200 Recommended EKG comments
ethanol_screening String 200 Recommended Ethanol Value
Query oxycodon Integer Recommended Oxycodone 0;1;2;3;4 0=No; 1=Yes;2=Unclear or Equivocal; 3=Results not valid; 4=Not assessed oxycodone_screening
Query ua_chem_strip_screening Integer Recommended UA Chem Strip 1;2 1= Yes; 2= No
ua2 String 25 Recommended Urine clarity
ua15 String 100 Recommended Epithelial Cells
ua16 String 500 Recommended Urine Mic Comment
Query cbc_scan_day_labs Integer Recommended CBC Collected?
1;2
1= Yes; 2= No cbc_screening
Query cmpscan_day_labs Integer Recommended CMP collected? 1;2 1= Yes; 2= No
Query egfraa_scan_day_labs Integer Recommended eGFR-African American 1;2 1= Normal; 2= Abnormal
Query egfr_all_races_scan_day_labs Integer Recommended eGFR-All Other Races 1;2 1= Normal; 2= Abnormal
Query rnasample Integer Recommended Was RNA sample collected? 1;2 1= Yes; 2= No
reason_rna_not_collected String 50 Recommended Reason for not collecting RNA
rnasampletime String 10 Recommended If yes, what time was RNA sample collected?
rnasamplecomments String 200 Recommended RNA Comments:
Query lithium_level_collected Integer Recommended Was lithium sample collected?
1;2
1= Yes; 2= No
Query mr_licurdose Integer Recommended lithium current total dose lithiumdose
lithium_not_collected_reason String 200 Recommended If Lithium not collected, explain why:
Query last_lithium_dose Float Recommended How long ago was last lithium dose? (hours)
lithiumlvls_comments String 255 Recommended Lithium Comments
Query tnfa Float Recommended Tumor necrosis factor alpha level pg/mL
Query telomere Float Recommended Telomere length (ng)
Query isoprostanes Float Recommended Isoprostanes: Test Result picomole/mL
uuro_00_re String 20 Recommended Urobilinogen Result
Query uuro_00_ab Integer Recommended Urobilinogen Abnormal 0::2 0=No;1=Yes, not clinically significant; 2=Yes, clinically significant urobilinogen_ab
Query uuro_00_ex Integer Recommended Urobilinogen Excludes 0;1 0 = No; 1 = Yes
uuro_00_co String 200 Recommended Urobilinogen Comments
Query ggt_01_re Float Recommended Gamma-Glutamyl Transferase (GGT) (U/L, IUL) 0::100; -9 -9 = Missing
Query ggt_01_ab Integer Recommended Gamma-Glutamyl Transferase (GGT) (U/L, IUL): Abnormal? 0::2; -9 1=Yes, not clinically significant; 2=Yes, clinically significant; 0=No; -9=Unknown
Query ggt_01_ex Integer Recommended Gamma-Glutamyl Transferase (GGT) (U/L, IUL): Excludes? 0;1 0 = No; 1 = Yes
ggt_01_co String 200 Recommended Gamma-Glutamyl Transferase (GGT) (U/L, IUL): Comments
Query alb_05_ex Integer Recommended Albumin (g/dl): Excludes? 0;1 0 = No; 1 = Yes
alb_05_co String 200 Recommended Albumin (g/dl): Comments
Query tro_16_re Float Recommended Troponin (ng/ml) 0::2; -9 -9 = Missing
Query tro_16_ab Integer Recommended Troponin (ng/ml): Abnormal? 0::2; -9 1=Yes, not clinically significant; 2=Yes, clinically significant; 0=No; -9=Unknown
Query tro_16_ex Integer Recommended Troponin (ng/ml): Excludes? 0;1 0 = No; 1 = Yes
tro_16_co String 200 Recommended Troponin (ng/ml): Comments
Query plt_15_ab Integer Recommended Platelet Count (k/mm3): Abnormal? 0::2; -9 1=Yes, not clinically significant; 2=Yes, clinically significant; 0=No; -9=Unknown
plt_15_co String 200 Recommended Platelet Count (k/mm3): Comments
Query aptt_17_re Float Recommended APTT (sec) 0::120; -9 -9 = Missing
Query aptt_17_ab Integer Recommended APTT (sec): Abnormal? 0::2; -9 1=Yes, not clinically significant; 2=Yes, clinically significant; 0=No; -9=Unknown
Query aptt_17_ex Integer Recommended APTT (sec): Excludes? 0;1 0 = No; 1 = Yes
aptt_17_co String 200 Recommended APTT (sec): Comments
Query pt_18_re Float Recommended Prothrombin time/International normalized ratio (PT/INR) (units) 0::30; -9 -9 = Missing
Query pt_18_ab Integer Recommended Prothrombin time/International normalized ratio (PT/INR) (units): Abnormal? 0::2; -9 1=Yes, not clinically significant; 2=Yes, clinically significant; 0=No; -9=Unknown
Query pt_18_ex Integer Recommended Prothrombin time/International normalized ratio (PT/INR) (units): Excludes? 0;1 0 = No; 1 = Yes
pt_18_co String 200 Recommended Prothrombin time/International normalized ratio (PT/INR) (units): Comments
Query cd4_19_re Integer Recommended CD4 Count (cells/mm3) 0::2100; -9 -9 = Missing
Query cd4_19_ab Integer Recommended CD4 Count (cells/mm3): Abnormal? 0::2; -9 1=Yes, not clinically significant; 2=Yes, clinically significant; 0=No; -9=Unknown
Query cd4_19_ex Integer Recommended CD4 Count (cells/mm3): Excludes? 0;1 0 = No; 1 = Yes
cd4_19_co String 200 Recommended CD4 Count (cells/mm3): Comments
ua10 String 50 Recommended Urobilinogen status
absolute_nrbc_screening String 15 Recommended Absolute nRBC (range) nrbc_scan_day
th1_cytokines String 175 Recommended Type 1 helper T cells cytokines, concentrations, and units
th2_cytokines String 175 Recommended Type 2 helper T cells cytokines, concentrations, and units
th17_cytokines String 175 Recommended Type 17 helper T cells cytokines, concentrations, and units
progesterone_time1 Float Recommended progesterone levels (pg/ml) at time point 1 0 :: 9999.99
progesterone_time2 Float Recommended progesterone levels (pg/ml) at time point 2 0 :: 9999.99
progesterone_time3 Float Recommended progesterone levels (pg/ml) at time point 3 0 :: 9999.99
progesterone_time4 Float Recommended progesterone levels (pg/ml) at time point 4 0 :: 9999.99
agratio_val String 50 Recommended A/G Ratio: Value
agratio_ab Integer Recommended A/G Ratio: Abnormal? 0::2; -9 1=Yes, not clinically significant; 2=Yes, clinically significant; 0=No; -9=Unknown
ioncalc_val String 50 Recommended Ionized Calcium, Calculated: Value
ioncalc_ab Integer Recommended Ionized Calcium, Calculated: Abnormal? 0::2; -9 1=Yes, not clinically significant; 2=Yes, clinically significant; 0=No; -9=Unknown
egfr_ab Integer Recommended eGFR: Abnormal? 0::2; -9 1=Yes, not clinically significant; 2=Yes, clinically significant; 0=No; -9=Unknown
imgran_val String 50 Recommended Immature Gran #: Value
imgran_ab Integer Recommended Immature Gran #: Abnormal? 0::2; -9 1=Yes, not clinically significant; 2=Yes, clinically significant; 0=No; -9=Unknown
igpercent_val String 50 Recommended Immature Gran %: Value
uepicells_val String 50 Recommended Epithelial Cells: Value
uepicells_ab Integer Recommended Epithelial Cells: Abnormal? 0::2; -9 1=Yes, not clinically significant; 2=Yes, clinically significant; 0=No; -9=Unknown
ubacteria_val String 50 Recommended Bacteria: Value
ubacteria_ab Integer Recommended Bacteria: Abnormal? 0::2; -9 1=Yes, not clinically significant; 2=Yes, clinically significant; 0=No; -9=Unknown
umucus_val String 50 Recommended Mucus: Value
umucus_ab Integer Recommended Mucus: Abnormal? 0::2; -9 1=Yes, not clinically significant; 2=Yes, clinically significant; 0=No; -9=Unknown
uamur_val String 50 Recommended Amorphous Urates: Value
uamur_ab Integer Recommended Amorphous Urates: Abnormal? 0::2; -9 1=Yes, not clinically significant; 2=Yes, clinically significant; 0=No; -9=Unknown
aniongap_val String 50 Recommended Anion Gap: Value
aniongap_ab Integer Recommended Anion Gap: Abnormal? 0::2; -9 1=Yes, not clinically significant; 2=Yes, clinically significant; 0=No; -9=Unknown
buncreatrat_val String 50 Recommended Bun/Creatinine Ratio: Value
buncreatrat_ab Integer Recommended BUN/Creatinine Ratio: Abnormal? 0::2; -9 1=Yes, not clinically significant; 2=Yes, clinically significant; 0=No; -9=Unknown
osmolality_val String 50 Recommended Osmolality Calc: Value
osmolality_ab Integer Recommended Osmolality Calc: Abnormal? 0::2; -9 1=Yes, not clinically significant; 2=Yes, clinically significant; 0=No; -9=Unknown
globulin_ab Integer Recommended Globulin: Abnormal? 0::2; -9 1=Yes, not clinically significant; 2=Yes, clinically significant; 0=No; -9=Unknown
urine_blood String 20 Recommended Specify amount of blood found in urine
bilirubin_ab Integer Recommended Urine: Bilirubin Abnormal? 0::2;-9 0=No;1=Yes, not clinically significant; 2=Yes, clinically significant; -9=Unknown
resp_source Integer Recommended Respondent Source 1::6 1= subject; 2= parent; 3= clinician; 4= teacher; 5= trainer; 6= fidelity reviewer source
vitamind_orig_result Float Recommended Vitamin D at Original Screening
vitamind_date Date Recommended Date of Vitamin D Test
vitamind_result Float Recommended Vitamin D Test Result
vitamind_normal Integer Recommended Vitamin D Test Normal 0;1 0= No; 1= Yes
vitamind_dose Integer Recommended Dose of Vitamin D recommended to increase level
vitamind_meal Integer Recommended Was dose taken with a fatty meal? 0;1 0= No; 1= Yes
vitamind_cs Integer Recommended Vitamin D Treatment Required? 0;1 0= No; 1= Yes
il4_end Float Recommended Interleukin 4: at end of assessment pg/mL, 0 = nondetectable
il10_beginning Float Recommended Interleukin 10 pg/mL, 0 = nondetectable il10
il10_end Float Recommended Interleukin 10: at end of assessment pg/mL, 0 = nondetectable
il17_beginning Float Recommended Interleukin 17 pg/mL, 0 = nondetectable il17
il17_end Float Recommended Interleukin 17: at end of assessment pg/mL, 0 = nondetectable
il23_beginning Float Recommended Interleukin 23 pg/mL, 0 = nondetectable il23
il23_end Float Recommended Interleukin 23: at end of assessment pg/mL, 0 = nondetectable
tnfa_beginning Float Recommended Tumor Necrosis Factor-alpha pg/mL, 0 = nondetectable tnf_alpha
tnfa_end Float Recommended Tumor Necrosis Factor-alpha: at end of assessment pg/mL, 0 = nondetectable
il12_beginning Float Recommended Interleukin 12 pg/mL, 0 = nondetectable il12
il12_end Float Recommended Interleukin 12: at end of assessment pg/mL, 0 = nondetectable
ifn_gamma_beginning Float Recommended Interferon gamma pg/mL, 0 = nondetectable inf_gamma
ifn_gamma_end Float Recommended Interferon gamma: at end of assessment pg/mL, 0 = nondetectable
il4_beginning Float Recommended Interleukin 4 pg/mL, 0 = nondetectable il_4
rbresu String 20 Recommended RBC: Unit 106/uL; 1012/uL; m/cmm; -900 = Missing; -300 = N/A chrcbc_rbc_unit
bnorresu String 20 Recommended Bands: Unit %; /L; /mm3
bnds_ll Float Recommended Bands- Lower Limit
bnds_ul Float Recommended Bands-Upper Limit
baso_per_status Integer Recommended Basophils % Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
baso_per_res Float Recommended Basophils % Value
baso_per_unit String 250 Recommended Basophils % Unit e.g., in percent (%)
baso_per_ll Float Recommended Basophils %- Lower Limit
baso_per_ul Float Recommended Basophils %- Upper Limit
baso_abs_status Integer Recommended Absolute Basophils Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
baorres Float Recommended Basophils value -9 = Unknown; -900 = Missing; -300 = N/A chrcbc_baso
rbc_ll Float Recommended Red Blood Cell (RBC)- Lower Limit
baorresu String 20 Recommended Basophils: Unit %; 10^9/L or 10^3/mm3; /L; /mm^3; -900 = Missing; -300 = N/A chrcbc_baso_unit
baso_abs_ll Float Recommended Absolute Basophils- Lower Limit
baso_abs_ul Float Recommended Absolute Basophils- Upper Limit
gran_per_status Integer Recommended Immature Granulocytes % Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
gran_per_res Float Recommended Immature Granulocytes % Value
gran_per_unit String 250 Recommended Immature Granulocytes % Unit e.g., in percent (%)
gran_per_ll Float Recommended Immature Granulocytes %- Lower Limit
gran_per_ul Float Recommended Immature Granulocytes %- Upper Limit
gran_abs_status Integer Recommended Absolute Immature Granulocytes Status
gran_abs_res Float Recommended Absolute Immature Granulocytes Value
rbc_ul Float Recommended Red Blood Cell (RBC)-Upper Limit
gran_abs_unit String 250 Recommended Absolute Immature Granulocytes Unit 10^3/uL
gran_abs_ll Float Recommended Absolute Immature Granulocytes- Lower Limit
gran_abs_ul Float Recommended Absolute Immature Granulocytes- Upper Limit
ret_per_status Integer Recommended Reticulocytes % Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
ret_per_res Float Recommended Reticulocytes % Value
ret_per_unit String 250 Recommended Reticulocytes % Unit e.g., in percent (%)
ret_per_ll Float Recommended Reticulocytes %- Lower Limit
ret_per_ul Float Recommended Reticulocytes %- Upper Limit
ret_abs_status Integer Recommended Absolute Reticulocytes Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
ret_abs_res Float Recommended Absolute Reticulocytes Value
hgb_status Integer Recommended Hemoglobin (Hgb) Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
ret_abs_unit String 250 Recommended Absolute Reticulocytes Unit e.g., in millions per microliter (10^6/?L)
ret_abs_ll Float Recommended Absolute Reticulocytes- Lower Limit
ret_abs_ul Float Recommended Absolute Reticulocytes- Upper Limit
pt_status Integer Recommended Prothrombin Time (PT) Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
pt_res Float Recommended Prothrombin Time (PT) Value
pt_unit String 250 Recommended Prothrombin Time (PT) Unit e.g., in seconds
pt_ll Float Recommended Prothrombin Time (PT)- Lower Limit
pt_ul Float Recommended Prothrombin Time (PT)- Upper Limit
ptt_status Integer Recommended Partial Thromboblastin Time (PTT) Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
ptt_res Float Recommended Partial Thromboblastin Time (PTT) Value
hgorrees Float Recommended Hemoglobin (Hgb) value -9 = Unknown; -900 = Missing; -300 = N/A chrcbc_hgb
ptt_unit String 250 Recommended Partial Thromboblastin Time (PTT) Unit e.g., in seconds
ptt_ll Float Recommended Partial Thromboblastin Time (PTT)- Lower Limit
ptt_ul Float Recommended Partial Thromboblastin Time (PTT)- Upper Limit
crp_status Integer Recommended C-Reactive Protein (CRP) Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
crp_res Float Recommended C-Reactive Protein (CRP) Value
crp_unit String 250 Recommended C-Reactive Protein (CRP) Unit e.g., in miligrams per liter (mg/L)
crp_ll Float Recommended C-Reactive Protein (CRP)-Lower Limit
crp_ul Float Recommended C-Reactive Protein (CRP)-Upper Limit
alt_status Integer Recommended ALT Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
alorres Float Recommended ALT (SGPT) value
hgorresu String 20 Recommended Hemoglobin (Hgb): Unit g/dL; g/L; mmol/L (monomer); mmol/L (tetramer); -900 = Missing; -300 = N/A chrcbc_hgb_unit
alorresu String 20 Recommended ALT (SGPT): Unit U/L; IU/L
alt_ll Float Recommended ALT- Lower Limit
alt_ul Float Recommended ALT- Upper Limit
ast_status Integer Recommended AST- Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
asorres Float Recommended AST (SGOT) value
asorresu String 20 Recommended AST (SGOT): Unit U/L; IU/L
ast_ll Float Recommended AST- Lower Limit
ast_ul Float Recommended AST- Upper Limit
coo_status Integer Recommended Bicarbonate (total CO2) Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
coorres Float Recommended Bicarbonate (total CO2) value
hgb_ll Float Recommended Hemoglobin (HGB) - Lower Limit
coorresu String 20 Recommended Bicarbonate (total CO2): Unit mmol/L; mEq/L
bic_ll Float Recommended Bicarbonate - Lower Limit
bic_ul Float Recommended Bicarbonate - Upper Limit
chlor_status Integer Recommended Chloride Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
chorres Float Recommended Chloride value
chorresu String 20 Recommended Chloride: Unit mmol/L; mEq/L
chlor_ll Float Recommended Chloride - Lower Limit
chlor_ul Float Recommended Chloride - Upper Limit
sod_status Integer Recommended Sodium Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
soorres Float Recommended Sodium value
hgb_ul Float Recommended Hemoglobin (HGB) - Upper Limit
soorresu String 20 Recommended Sodium: Unit mmol/L; mEq/L
sod_ll Float Recommended Sodium - Lower Limit
sod_ul Float Recommended Sodium - Upper Limit
pot_status Integer Recommended Potassium Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
poorres Float Recommended Potassium value
poorresu String 20 Recommended Potassium: Unit mmol/L; mEq/L
pot_ll Float Recommended Potassium - Lower Limit
pot_ul Float Recommended Potassium - Upper Limit
bun_status Integer Recommended BUN Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
bun_res Float Recommended BUN Value
hct_status Integer Recommended Hematocrit (HCT) Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
bun_unit String 250 Recommended BUN Unit e.g., in miligrams per deciliter (mg/dL)
bun_ll Float Recommended BUN - Lower Limit
bun_ul Float Recommended BUN - Upper Limit
creat_status Integer Recommended Creatinine Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
crorres Float Recommended Creatinine value
crorresu String 20 Recommended Creatinine: Unit mg/dL; umol/L
creat_ll Float Recommended Creatinine - Lower Limit
creat_ul Float Recommended Creatinine - Upper Limit
chol_status Integer Recommended Total Cholesterol Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
chol_res Float Recommended Total Cholesterol Value
hcorres Float Recommended Hematocrit value -900 = Missing; -300 = N/A chrcbc_hct
chol_unit String 250 Recommended Total Cholesterol Unit e.g., in miligrams per deciliter (mg/dL)
chol_ll String 22 Recommended Total Cholesterol - Lower Limit
chol_ul String 22 Recommended Total Cholesterol - Upper Limit
ferr_status Integer Recommended Ferritin Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
ferr_res Float Recommended Ferritin Value
ferr_unit String 250 Recommended Ferritin Unit e.g., in nanograms per mililiter (ng/mL)
ferr_ll Float Recommended Ferritin- Lower Limit
ferr_ul Float Recommended Ferritin- Upper Limit
fol_status Integer Recommended Folate Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
fol_res Float Recommended Folate Value
hcorresu String 20 Recommended Hematocrit: Unit L/L; %; -900 = Missing; -300 = N/A chrcbc_hct_unit
fol_unit String 250 Recommended Folate Unit e.g., in nanograms per mililiter (ng/mL)
fol_ll Float Recommended Folate- Lower Limit
fol_ul Float Recommended Folate- Upper Limit
t4fr_status Integer Recommended Thyroxine, Free T4 Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
t4frun Float Recommended Thyroxine, Free T4 (Free T4) value
t4frnd String 20 Recommended Thyroxine, Free T4 (Free T4): Unit pmol/L; ng/dL; ng/L
t4fr_ll Float Recommended Thyroxine, Free T4- Lower Limit
t4fr_ul Float Recommended Thyroxine, Free T4- Upper Limit
ggt_status Integer Recommended Gamma-Glutamyl Transpeptidase (GGT) Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
ggt_res Float Recommended Gamma-Glutamyl Transpeptidase (GGT) Value
hct_ll Float Recommended Hematocrit (HCT) - Lower Limit
ggt_unit String 250 Recommended Gamma-Glutamyl Transpeptidase (GGT) Unit
ggt_ll Float Recommended Gamma-Glutamyl Transpeptidase (GGT)- Lower Limit
ggt_ul Float Recommended Gamma-Glutamyl Transpeptidase (GGT)- Upper Limit
gluc_status Integer Recommended Glucose Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
glorres Float Recommended Glucose value
glorresu String 20 Recommended Glucose: Unit mmol/L; mg/dL
gluc_ll Float Recommended Fasting blood glucose - Lower Limit
gluc_ul Float Recommended Fasting blood glucose - Upper Limit
hdl_status Integer Recommended HDL Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
bsln_hdl Float Recommended Baseline HDL Cholesterol 0::300 bsin_hdl
hct_ul Float Recommended Hematocrit (HCT) - Upper Limit
hdl_unit String 250 Recommended HDL Unit e.g., in miligrams per deciliter (mg/dL)
hdl_ll String 22 Recommended HDL - Lower Limit
hdl_ul String 22 Recommended HDL - Upper Limit
ldl_status Integer Recommended LDL Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
bsln_ldl Float Recommended baseline ldl cholesterol 0::300 bsin_ldl
ldl_unit String 250 Recommended LDL Unit e.g., in miligrams per deciliter (mg/dL)
ldl_ll String 22 Recommended LDL - Lower Limit
ldl_ul Float Recommended LDL - Upper Limit
tsh_status Integer Recommended Thyroid Stimulating Hormone (TSH) Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
tshunits Float Recommended Thyroid Stimulating Hormone (TSH) value
mcv_status Integer Recommended Mean Corpuscular Volume (MCV) Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
tshnd String 20 Recommended Thyroid Stimulating Hormone (TSH): Unit mIU/L; uIU/mL
tsh_ll Float Recommended Thyroid Stimulating Hormone (TSH) - Lower Limit
tsh_ul Float Recommended Thyroid Stimulating Hormone (TSH) - Upper Limit
tri_status Integer Recommended Trigylcerides Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
bltrigs Float Recommended baseline triglycerides
tri_unit String 250 Recommended Triglycerides Unit e.g., in miligrams per deciliter (mg/dL)
tri_ll Float Recommended Triglycerides - Lower Limit
tri_ul Float Recommended Triglycerides - Upper Limit
vtb12_status Integer Recommended Vitamin B12 Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
vtb12_res Float Recommended Vitamin B12 Value
mcv_res Float Recommended Mean Corpuscular Volume (MCV) Value -900 = Missing; -300 = N/A chrcbc_mcv
vtb12_unit String 250 Recommended Vitamin B12 Unit e.g., in picograms per mililiter (pg/mL)
vtb12_ll Float Recommended Vitamin B12- Lower Limit
vtb12_ul Float Recommended Vitamin B12- Upper Limit
a1c_status Integer Recommended Hemoglobin A1c Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
a1c_res Float Recommended Hemoglobin A1c (%)
a1c_unit String 250 Recommended Hemoglobin A1c Unit e.g., in percent (%)
a1c_ll Float Recommended Hemoglobin A1c- Lower Limit
a1c_ul Float Recommended Hemoglobin A1c- Upper Limit
urn_glu_status Integer Recommended Urine Glucose Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
urn_glu_res Integer 30 Recommended Urine value - Glucose 0::4 0=Negative; 1= 100 (Trace) ; 2= 250 (1+); 3=500 (2+); 4= > or = 1000 (3+)
mcv_unit String 250 Recommended Mean Corpuscular Volume (MCV) Unit e.g., in femtoliters (fL); -900 = Missing; -300 = N/A chrcbc_mcv_unit
urn_glu_unit String 250 Recommended Urine Glucose Unit e.g., in miligrams per deciliter (mg/dL)
urn_bili_status Integer Recommended Urine Bilirubin Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
urn_bili_res Integer 25 Recommended Urine: Bilirubin 0::3 0 = Negative; 1 = Small (1+); 2 = Moderate (2+); 3 = Large (3+)
urn_bili_unit String 250 Recommended Urine Bilirubin Unit e.g., in miligrams per deciliter (mg/dL)
urn_ket_status Integer Recommended Urine Ketones Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
urn_ket_res Integer 30 Recommended Urine value - Ketones 0::5 0=Negative; 1= Trace; 2= 15 (1+) ; 3= 40 (2+) ; 4= 80 (3+) ; 5= > or = 160 (4+)
urn_ket_unit String 250 Recommended Urine Ketones Unit e.g., in miligrams per deciliter (mg/dL)
urn_grav_status Integer Recommended Urine Specific Gravity Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
urn_grav_res Integer 30 Recommended Urine value - Specific Gravity 1::6 1=< or = 1.005; 2=1.010; 3=1.015; 4=1.020; 5=1.025; 6= > or = 1.030
urn_blood_status Integer Recommended Urine Blood Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
mcv_ll Float Recommended Mean Corpuscular Volume (MCV)- Lower Limit
urn_blood_res Integer Recommended Urine Blood Value 0::5 0 = Negative; 1 = Trace-Lysed; 2 = Trace-Intact; 3 = Small (1+) ; 4 = Moderate (2+) ; 5 = Large (3+)
urn_ph_status Integer Recommended Urine pH Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
urn_ph Integer Recommended urinalysis pH 1::8 1, 5.0; 2, 5.5; 3, 6.0; 4, 6.5; 5, 7.0; 6, 7.5; 7, 8.0; 8, 8.5 urn_ph_res
urn_prot_status Integer Recommended Urine Protein Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
rspuprot_act String 30 Recommended Urine value - Protein
urn_prot_unit String 250 Recommended Urine Protein Unit e.g., in miligrams per deciliter (mg/dL)
urn_uro_status Integer Recommended Urine Urobilinogen Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
urn_uro_res Integer 50 Recommended urinalysis urobilinogen 1::5 1=0.2; 2=1.0; 3=2.0; 4=4.0; 5=> or = 8.0
urn_uro_unit String 250 Recommended Urine Urobilinogen Unit e.g., in Ehrlich Units per deciliter (E.U./dL)
urn_leuk_status Integer Recommended Urine Leukocytes Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS urn_leok_status
mcv_ul Float Recommended Mean Corpuscular Volume (MCV)- Upper Limit
urn_leuk_res Integer Recommended Urine Leukocytes Value 0::4 0 = Negative; 1 = Trace; 2 = Small; 3 = Moderate; 4 = Large
urn_nit_status Integer Recommended Urine Nitrites Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
urn_nit_res Integer 20 Recommended Urine Nitrites Result 0;1 0=Negative; 1=Positive
urn_fent_status Integer Recommended Urine Fentanyl Status 0;1 0= Negative; 1= Positive
urn_fent_unit String 250 Recommended Urine Fentanyl Unit e.g., in nanograms per mililiter (ng/mL)
upreg Integer Recommended Pregnant - Urine test 1::3; 9 1=Positive; 2=Negative; 3=Not done; 9=Equivocal (Must retest)
urntox_benzo Integer Recommended Urine Tox for Benzodiazepine 0;1 0 = Negative; 1 = Positive
urntox_barb Integer Recommended Urine Tox for Barbituates 0;1 0= Negative; 1= Positive
urntox_opiates Integer Recommended Urine Tox for Opiates 0;1 0= Negative; 1= Positive
urntox_bupr Integer Recommended Urine Tox for Buprenorphine 0;1 0= Negative; 1= Positive
mch_status Integer Recommended Mean Corpuscular Hemoglobin (MCH) Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
urntox_methadone Integer Recommended Urine Tox for Methadone 0;1 0= Negative; 1= Positive
urntox_oxy Integer Recommended Urine Tox for Oxycodone 0;1 0= Negative; 1= Positive
urntox_ppx Integer Recommended Urine Tox for Propoxyphene (PPX) 0;1 0= Negative; 1= Positive
urinetox_cocaine Integer Recommended Urine Tox for Cocaine 0;1;-7;-8;-9;999 0 = Negative; 1 = Positive; -7 = Don't know; -8 = Refused to answer; -9 = Does not apply; 999 = Missing value
urinetox_amphetamines Integer Recommended Urine Tox for Amphetamines 0;1;-7;-8;-9;999 0 = Negative; 1 = Positive; -7 = Don't know; -8 = Refused to answer; -9 = Does not apply; 999 = Missing value urinetox_amphentamine
urntox_meth Integer Recommended Urine Tox for Methamphetamine 0;1 0 = Negative; 1 = Positive
urntox_mdma Integer Recommended Urine Tox for MDMA 0;1 0 = Negative; 1 = Positive
urntox_pcp Integer Recommended Urine Tox for Phenycyclidine (PCP) 0;1 0 = Negative; 1 = Positive
urinetox_cannabis Integer Recommended Urine Tox for Cannabis 0;1;-7;-8;-9;999 0 = Negative; 1 = Positive; -7 = Don't know; -8 = Refused to answer; -9 = Does not apply; 999 = Missing value
urntox_k2 Integer Recommended Urine Tox for K2/Spice 0;1 0 = Negative; 1 = Positive
mch_res Float Recommended Mean Corpuscular Hemoglobin (MCH) Value -900 = Missing; -300 = N/A chrcbc_mch
urntox_k3 Integer Recommended Urine Tox for K3/AB-Pinaca 0;1 0= Negative; 1= Positive
urntox_k4 Integer Recommended Urine Tox for K4/ UR-144 0;1 0= Negative; 1= Positive
urntox_mcat Integer Recommended Urine Tox for MethCathinones (MCAT) 0;1 0= Negative; 1= Positive
urntox_mdpv Integer Recommended Urine Tox for MDPV/Bath Salts 0;1 0= Negative; 1= Positive
saliva_etoh Integer Recommended Saliva Alcohol Test 0;1 0= Negative; 1= Positive
urntox_nic Integer Recommended Urine Tox for Nicotine/Cotinine 0;1 0= Negative; 1= Positive
vb12_fol_fer Integer Recommended Were Ferritin, Folate, and Vitamin B12 Tests Conducted? 0;1 0, No; 1, Yes
vb12_fol_fercmts String 250 Recommended Comments on Decision to Conduct Ferritin, Folate, and Vitamin B12:
clinlab_repeat Integer Recommended Any Repeated due to Potential Spurious Results? 0;1 0, No; 1, Yes
clinlab_repeatcmts String 250 Recommended Name of Tests to be Repeated and Comments
wbc_status Integer Recommended WBC status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
mch_unit String 250 Recommended Mean Corpuscular Hemoglobin (MCH) Unit e.g., in picograms (pg); -900 = Missing; -300 = N/A chrcbc_mch_unit
clinlab_elig Integer Recommended Eligibility Based on Clinical Lab Tests 0;1 0, Pending; 1, Eligible; 2, Disqualifying
clinlab_disqual Integer Recommended Reason for Disqualification 1::4 1, Suggests Disqualifying Medical Conditio; 2, Potentially Affects Interpretation of Study Outcomes (e.g., mildly high LFTs may affect neurosteroid metabolism and levels); 3, Creatinine Clearance < 30 ml/min4, GGT Indicates Alcohol Use Disorder
clinlab_eligcmts String 250 Recommended Comments Regarding Eligibility Based on Labs
clinlab_refer Integer Recommended Lab Test Abnormalities Referred for Further Evaluation? 0;1 0, No; 1, Yes
clinlab_refercmts String 250 Recommended Comments on Abnormalities Referred for Further Eval
mch_ll Float Recommended Mean Corpuscular Hemoglobin (MCH)- Lower Limit
mch_ul Float Recommended Mean Corpuscular Hemoglobin (MCH)- Upper Limit
mchc_status Integer Recommended Mean corpuscular hemoglobin concentration (MCHC) Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
mchc_res Float Recommended Mean corpuscular hemoglobin concentration (MCHC) Value -900 = Missing; -300 = N/A chrcbc_mchc
mchc_unit String 250 Recommended Mean corpuscular hemoglobin concentration (MCHC) Unit e.g., in grams per deciliter (g/dL); -900 = Missing; -300 = N/A chrcbc_mchc_unit
mchc_ll Float Recommended Mean corpuscular hemoglobin concentration (MCHC)-Lower Limit
mchc_ul Float Recommended Mean corpuscular hemoglobin concentration (MCHC)-Upper Limit
rdw_status Integer Recommended Red Cell Distribution Width (RDW)-CV Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
rdw_res Float Recommended Red Cell Distribution Width (RDW)-CV Value
wborres Float Recommended WBC value -900 = Missing; -300 = N/A chrcbc_wbc
rdw_unit String 250 Recommended Red Cell Distribution Width (RDW)-CV Unit e.g., in percent (%)
rdw_ll Float Recommended Red Cell Distribution Width (RDW)-CV- Lower Limit
rdw_ul Float Recommended Red Cell Distribution Width (RDW)-CV- Upper Limit
plt_status Integer Recommended Platelet Count Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
plorres Float Recommended Platelet Count value -900 = Missing; -300 = N/A chrcbc_platelets
plorresu String 20 Recommended Platelet Count: Unit %; 10^9/L or 10^3/mm3; /L; /mm^3; -900 = Missing; -300 = N/A chrcbc_platelets_unit
plt_ll Float Recommended Platelet Count - Lower Limit
plt_ul Float Recommended Platelet Count - Upper Limit
nrbc_per_status Integer Recommended Nucleated Red Blood Cell % (NRBC) Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
nrbc_per_res Float Recommended Nucleated Red Blood Cells % Value
wborresu String 20 Recommended WBC: Unit 109/L or 103/mm3; mm3; 103/uL; K/cmm; -900 = Missing; -300 = N/A chrcbc_wbc_unit
nrbc_per_unit String 250 Recommended Nucleated Red Blood Cells % Unit e.g., in percent (%)
nrbc_per_ll Float Recommended Nucleated Red Blood Cells %- Lower Limit
nrbc_per_ul Float Recommended Nucleated Red Blood Cells %- Upper Limit
nrbc_abs_status Integer Recommended Absolute Nucleated Red Blood Cell (NRBC) Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
nrbc_abs_res Float Recommended Absolute Nucleated Red Blood Cell (NRBC) Value
nrbc_abs_unit String 250 Recommended Absolute Nucleated Red Blood Cell (NRBC) Unit
nrbc_abs_ll Float Recommended Absolute Nucleated Red Blood Cell (NRBC)-Lower Limit
nrbc_abs_ul Float Recommended Absolute Nucleated Red Blood Cell (NRBC)- Upper Limit
poly_per_status Integer Recommended POLY % Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
poly_per_res Float Recommended POLY % Value
wbc_ll Float Recommended White Blood Cell (WBC) - Lower Limit
poly_per_unit String 250 Recommended POLY % Unit e.g., in percent (%)
poly_per_ll Float Recommended POLY %- Lower Limit
poly_per_ul Float Recommended POLY %- Upper Limit
poly_abs_status Integer Recommended Absolute POLY Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
poly_abs_res Float Recommended Absolute POLY Value
poly_abs_unit String 250 Recommended Absolute POLY: Unit e.g., in thousands per microliter (10^3/?L)
poly_abs_ll Float Recommended Absolute POLY- Lower Limit
poly_abs_ul Float Recommended Absolute POLY- Upper Limit
lym_per_status Integer Recommended Lymphocytes % Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
lym_per_res Float Recommended Lymphocytes % Value
wbc_ul Float Recommended White Blood Cell (WBC) - Upper Limit
lym_per_unit String 250 Recommended Lymphocytes % Unit e.g., in percent (%)
lym_per_ll Float Recommended Lymphocytes %- Lower Limit
lym_per_ul Float Recommended Lymphocytes %- Upper Limit
lym_abs_status Integer Recommended Absolute LYMPHOCYTES status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
lyorres Float Recommended Lymphocytes value -900 = Missing; -300 = N/A chrcbc_lymph
lyorresu String 20 Recommended Lymphocytes: Unit %; 10^9/L or 10^3/mm3; /L; /mm^3; -900 = Missing; -300 = N/A chrcbc_lymph_unit
lym_abs_ll Float Recommended Absolute Lymphocytes- Lower Limit
lym_abs_ul Float Recommended Absolute Lymphocytes- Upper Limit
mono_per_status Integer Recommended Monocytes % Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
mono_per_res Float Recommended Monocytes % Value
rbc_status Integer Recommended RBC Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
mono_per_unit String 250 Recommended Monocytes % Unit e.g., in percent (%)
mono_per_ll Float Recommended Monocytes %- Lower Limit
mono_per_ul Float Recommended Monocytes %- Upper Limit
mono_abs_status Integer Recommended Absolute Monocytes Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
moorres Float Recommended Monocytes value -900 = Missing; -300 = N/A chrcbc_monos
moorresu String 20 Recommended Monocytes: Unit %; 10^9/L or 10^3/mm3; /L; /mm^3; -900 = Missing; -300 = N/A chrcbc_monos_unit
mono_abs_ll Float Recommended Absolute Monocytes- Lower Limit
mono_abs_ul Float Recommended Absolute Monocytes- Upper Limit
eos_per_status Integer Recommended Eosinophils % Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
eos_per_res Float Recommended Eosinophils % Value
rbres Float Recommended RBC value -900 = Missing; -300 = N/A chrcbc_rbc
eos_per_unit String 250 Recommended Eosinophils % Unit e.g., in percent (%)
eos_per_ll Float Recommended Eosinophils %- Lower Limit
eos_per_ul Float Recommended Eosinophils %- Upper Limit
eos_abs_status Integer Recommended Absolute Eosinophils Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
eoorres Float Recommended Eosinophils value -9 = Unknown; -900 = Missing; -300 = N/A chrcbc_eos
eorresu String 20 Recommended Eosinophils: Unit %; 10^9/L or 10^3/mm3; /L; /mm^3; -900 = Missing; -300 = N/A chrcbc_eos_unit
eos_abs_ll Float Recommended Absolute Eosinophils- Lower Limit
eos_abs_ul Float Recommended Absolute Eosinophils- Upper Limit
bnds_status Integer Recommended Bands Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
bnorres Float Recommended Bands value
labsarc08 Float Recommended Carbohydrate deficient Transferrin (CDT)
urn_grav_result Float Recommended Urine Specific Gravity Result
urn_grav_ll Float Recommended Urine Specific Gravity Lower Limit
urn_grav_ul Float Recommended Urine Specific Gravity Upper Limit
urn_ph_ll Float Recommended Urine pH Lower Limit
urn_ph_ul Float Recommended Urine pH Upper Limit
urn_uro_ul String 20 Recommended Urine Urobilinogen Upper Limit
urn_prot_res Integer Recommended Urine Protein Result 0::5 0= Negative; 1= Trace, 2= 30 (1+), 3= 100 (2+), 4= > or = 300 (3+)
total_bilirubin Float Recommended Total Bilirubin 0::9.9;-7;-8;-9;999 In mg/dL. -7 = Don't know; -8 = Refused to answer; -9 = Does not apply
alkaline_phosphatase Integer Recommended Alkaline Phosphatase (U/L)
magnesium Float Recommended Magnesium (mg/dL)
phosphorus Float Recommended Phosphate (as Phosphorus) (mg/dL)
uric_acid Float Recommended Uric Acid (mg/dL)
mpv Float Recommended Mean Platelet Volume (MPV) (fL) -900 = Missing; -300 = N/A chrcbc_mpv
absneutrocount Integer Recommended Absolute Neutrophils Count (cells/uL)
neutrophils Float Recommended Neutrophils %
urine_color String 20 Recommended Urine Color
urine_ph Float Recommended Urine pH
urine_bili_res Integer Recommended Urine Bilirubin 0::5 0=Negative; 1=Trace; 2=1+; 3=2+; 4=3+; 5=greater than 3+
urine_blood_res Integer Recommended Urine Blood 0::5 0=Negative; 1=Trace; 2=1+; 3=2+; 4=3+; 5=greater than 3+
urine_nit_res Integer Recommended Urine Nitrite 0::5 0=Negative; 1=Trace; 2=1+; 3=2+; 4=3+; 5=greater than 3+
bun Float Recommended Bun 0::99.99;-7;-8;-9;999 In mg/dL. -7 = Don't know; -8 = Refused to answer; -9 = Does not apply
egfr_nonaa Integer Recommended eGFR non-African American (mL/min/1.73m2)
egfr_aa Integer Recommended eGFR African American (mL/min/1.73m2)
calcium_ Float Recommended Calcium (mg/dL)
total_protein Float Recommended Total Protein (g/dL)
albumin Float Recommended Albumin (g/dL)
globulin Float Recommended Globulin (g/dL)
estradiol_beta_17 Float Recommended 17-beta-estradiol concentration, pg/mL
progesterone_ng_ml Float Recommended Progesterone level, ng/mL
log_progesterone Float Recommended Log-transformed progesterone value
testosterone_ng_ml Float Recommended Testosterone level, ng/mL
log_testosterone Float Recommended Log-transformed testosterone value
sample_description String 3,500 Recommended Sample description: tissue type, i.e. blood, saliva, brain etc. whole blood; saliva; brain; urine; serum; plasma; CSF; IPS; Fibroblast; Neuronal Progenitor; skin biopsy; temporal cortex; lymphoblastoid cell line; unknown; semen; frontal cortex; parietal cortex; basal ganglia; Placenta; hair; occipital visual cortex; cerebellum; spleen; stool; muscle; kidney; liver; heart; cord blood; nasal swab; DNA; RNA; breastmilk; buccal; oral cells; rectal swab; cervicovaginal swab
sample_id_original String 100 Recommended Original, user-defined Sample ID
sample_id_biorepository String 100 Recommended Biorepository Sample ID
cortisol_pg_ml Float Recommended Cortisol level, pg/mL
log_cortisol Float Recommended Log-transformed cortisol value
cytokine_il_10 Float Recommended Interleukin-10 (IL-10) level, pg/mL 0=Nondetectable
cytokine_il_6 Float Recommended Interleukin-6 (IL-6) level, pg/mL 0=Nondetectable
cytokine_il_8 Float Recommended Interleukin-8 (IL-8) level, pg/mL 0=Nondetectable
cytokine_ifn_gamma Float Recommended Interferon-gamma (IFN-gamma) level, pg/mL 0=Nondetectable
cytokine_tnf_alpha Float Recommended Tumor necrosis factor alpha (TNF-alpha) level, pg/mL 0=Nondetectable
a19_hla Integer Recommended A19 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
mc1_hla Integer Recommended MC1 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
a23_hla Integer Recommended A23 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
a24_hla Integer Recommended A24 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
a25_hla Integer Recommended A25 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
a26_hla Integer Recommended A26 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
a28_hla Integer Recommended A28 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
a29_hla Integer Recommended A29 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
a30_hla Integer Recommended A30 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
a31_hla Integer Recommended A31 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
a32_hla Integer Recommended A32 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
a33_hla Integer Recommended A33 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
a34_hla Integer Recommended A34 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
a36_hla Integer Recommended A36 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
a66_hla Integer Recommended A66 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
b5_hla Integer Recommended B5 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
b7_hla Integer Recommended B7 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
b8_hla Integer Recommended B8 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
b13_hla Integer Recommended B13 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
b14_hla Integer Recommended B14 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
b15_hla Integer Recommended B15 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
date_hla Date Recommended Date Blood Collected from Baseline Evaluation
b16_hla Integer Recommended B16 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
b18_hla Integer Recommended B18 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
b22_hla Integer Recommended B22 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
b27_hla Integer Recommended B27 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
b35_hla Integer Recommended B35 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
b37_hla Integer Recommended B37 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
b38_hla Integer Recommended B38 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
b39_hla Integer Recommended B39 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
b40_hla Integer Recommended B40 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
b41_hla Integer Recommended B41 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
a1_hla Integer Recommended A1 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
b42_hla Integer Recommended B42 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
b44_hla Integer Recommended B44 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
b45_hla Integer Recommended B45 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
b47_hla Integer Recommended B47 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
b49_hla Integer Recommended B49 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
b50_hla Integer Recommended B50 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
b51_hla Integer Recommended B51 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
b52_hla Integer Recommended B52 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
b53_hla Integer Recommended B53 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
b54_hla Integer Recommended B54 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
a2_hla Integer Recommended A2 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
b55_hla Integer Recommended B55 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
b56_hla Integer Recommended B56 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
b57_hla Integer Recommended B57 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
b58_hla Integer Recommended B58 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
b60_hla Integer Recommended B60 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
b61_hla Integer Recommended B61 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
b62_hla Integer Recommended B62 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
b63_hla Integer Recommended B63 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
b70_hla Integer Recommended B70 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
bw4_hla Integer Recommended BW4 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
a3_hla Integer Recommended A3 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
bw6_hla Integer Recommended BW6 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
cw1_hla Integer Recommended CW1 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
cw2_hla Integer Recommended CW2 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
cw3_hla Integer Recommended CW3 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
cw4_hla Integer Recommended CW4 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
cw5_hla Integer Recommended CW5 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
cw6_hla Integer Recommended CW6 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
cw7_hla Integer Recommended CW7 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
cw8_hla Integer Recommended CW8 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
dr1_hla Integer Recommended DR1 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
a9_hla Integer Recommended A9 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
dr2_hla Integer Recommended DR2 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
dr3_hla Integer Recommended DR3 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
dr4_hla Integer Recommended DR4 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
dr5_hla Integer Recommended DR5 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
dr6_hla Integer Recommended DR6 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
dr7_hla Integer Recommended DR7 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
dr8_hla Integer Recommended DR8 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
dr9_hla Integer Recommended DR9 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
dr10_hla Integer Recommended DR10 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
dr11_hla Integer Recommended DR11 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
a10_hla Integer Recommended A10 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
dr12_hla Integer Recommended DR12 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
dr13_hla Integer Recommended DR13 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
dr14_hla Integer Recommended DR14 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
dr15_hla Integer Recommended DR15 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
dr16_hla Integer Recommended DR16 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
dr17_hla Integer Recommended DR17 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
dr103_hla Integer Recommended DR103 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
dqw1_hla Integer Recommended DQW1 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
dqw2_hla Integer Recommended DQW2 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
dqw3_hla Integer Recommended DQW3 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
a11_hla Integer Recommended A11 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
dqw4_hla Integer Recommended DQW4 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
dqw5_hla Integer Recommended DQW5 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
dqw6_hla Integer Recommended DQW6 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
dqw7_hla Integer Recommended DQW7 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
dqw8_hla Integer Recommended DQW8 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
dqw30_hla Integer Recommended DQW30 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
dqw52_hla Integer Recommended DQW52 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
drw51_hla Integer Recommended DRW51 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
drw52_hla Integer Recommended DRW52 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
drw53_hla Integer Recommended DRW53 Variant of Human Leukocyte Antigen 0;1 0= Absent; 1= Present
egfr Integer Recommended eGFR all races (mL/min/1.73m2)
ethyl_glucu_screen Integer Recommended Urine Ethyl Glucuronide Screen 0;1 0=Negative; 1=Positive
urn_ethyl_glucu Float Recommended If POSITIVE, indicate value of ethyl glucuronide (ng/ml)
urn_ethyl_sulf Float Recommended If POSITIVE, indicate value of ethyl sulfate (ng/ml)
bac_time String 10 Recommended Time when Blood Alcohol Content (BAC) recorded HH:MM am/pm
bac_lab Float Recommended Blood Alcohol Content (BAC) recorded during laboratory session
ampscz_missing Integer Recommended Please click if this form is missing all of its data 0;1 0 = Not clicked; 1 = Clicked chrcbc_missing
ampscz_missing_spec Integer Recommended Please specify the reason for missing data on this form 0::6 0 = Evaluation not necessary because the screening visit was less than 21 days from baseline visit; 1 = Measure refusal (no reason provided); 2 = No show; 3 = Research assistant forgot; 4 = Uncontrollable circumstance; 5 = Participant dropped out; 6 = Evaluation not necessary because the screening visit was less than 21 days from baseline visit chrcbc_missing_spec
ampscz_entry_date Date Recommended Date of Data Entry MM/DD/YYYY chrcbc_entry_date
chrcbc_neut Float Recommended Absolute Neutrophil Count (Neut) - units: 10^9/L equivalent to 10^3/uL -900 = Missing; -300 = N/A
chrcbc_wbcsum Float Recommended Sum of absolute neutrophils, lymphocytes, monocytes, basophils, and eosinophils - units: 10^9/L equivalent to 10^3/uL -900 = Missing; -300 = N/A; if([chrcbc_neut]=-300 or [chrcbc_neut]=-900 or [chrcbc_lymph]=-300 or [chrcbc_lymph]=-900 or [chrcbc_monos]=-300 or [chrcbc_monos]=-900 or [chrcbc_eos]=-300 or [chrcbc_eos]=-900 or [chrcbc_baso]=-300 or [chrcbc_baso]=-900, 999, sum([chrcbc_neut],[chrcbc_lymph],[chrcbc_monos],[chrcbc_eos],[chrcbc_baso]))
inr_status Integer Recommended International Normalized Ratio (INR) Status 0::2 0 = Normal; 1 = Abnomal NCS; 2 = Abnormal CS
inr_res Float Recommended International Normalized Ratio (INR) Results
inr_ll Float Recommended International Normalized Ratio (INR) Lower Limit
inr_ul Float Recommended International Normalized Ratio (INR) Upper Limit
kor_frontolimbic_vt Integer Recommended Kappa Opioid Receptor (KOR) frontolimbic volume of distribution (VT) value
urn_preg_date Date Recommended Date of urine pregnancy test MM/DD/YYYY
urn_preg_rslt Integer Recommended Urine test indicated pregnancy 1;2 1 = Yes; 2 = No
ecg_comp Integer Recommended ECG completed 1;2 1 = Yes; 2 = No
ecg_date Date Recommended Date ECG completed MM/DD/YYYY
ecg_out_range Integer Recommended ECG parameters out of range 1;2 1 = Yes; 2 = No
ecg_abnrm_cs Integer Recommended Is ECG abnormality clinically significant? 1;2 1 = Yes; 2 = No
ecg_pi_rvwd Integer Recommended PI reviewed ECG and deemed participant eligible 1;2 1 = Yes; 2 = No
ecg_rsn_tx String 200 Recommended Reasoning that participant is eligible despite clinically significant ECG abnormality
ac_date Date Recommended Anaesthesia consult date MM/DD/YYYY
bw_comp Integer Recommended Bloodwork completed 1;2 1 = Yes; 2 = No
bw_date Date Recommended Bloodwork date MM/DD/YYYY
bw_out_range Integer Recommended Bloodwork parameters out of range 1;2 1 = Yes; 2 = No
bw_abnrm_cs Integer Recommended Is bloodwork abnormality clinically significant? 1;2 1 = Yes; 2 = No
bw_pi_rvwd Integer Recommended PI reviewed bloodwork and deemed participant eligible 1;2 1 = Yes; 2 = No
bw_rsn_tx String 200 Recommended Reasoning that participant is eligible despite clinically significant bloodwork abnormality
urn_preg_comp Integer Recommended Urine pregnancy test was completed 1::3 1 = Yes; 2 = No; 3 = Not applicable
cycle_group Integer Recommended Whether Subject is Natural Cycling/IUD or Birth Control Pill 1;2 1 = Naturally Cycling; 2 = Birth Control Pill User
menstr_phase Integer Recommended Menstrual Cycle Phase Subject is in 1;2 1 = Follicular/Inactive; 2 = Luteal/Active
menstr_phase_day Integer Recommended Days within phase 1::21 Day 1 to Day 21; 1= First day of menses/first day of inactive pill week (follicular/inactive phase) or first day after LH positive urine test/first day of active pill weeks (luteal/active phase)
alc_dose_amt Integer Recommended Dose of Alcohol Received 0; 4; 8 0 = Placebo; 4 = Low dose; 8 = High dose
timepoint_label String 50 Recommended Timepoint/visit label
breath_alc Float Recommended Breath Alcohol Level of Subject at Each Timepoint 0::1 Percentage
vol_consume String 50 Recommended Volume of alcohol that was consumed by Subject
Data Structure

This page displays the data structure defined for the measure identified in the title and structure short name. The table below displays a list of data elements in this structure (also called variables) and the following information:

  • Element Name: This is the standard element name
  • Data Type: Which type of data this element is, e.g. String, Float, File location.
  • Size: If applicable, the character limit of this element
  • Required: This column displays whether the element is Required for valid submissions, Recommended for valid submissions, Conditional on other elements, or Optional
  • Description: A basic description
  • Value Range: Which values can appear validly in this element (case sensitive for strings)
  • Notes: Expanded description or notes on coding of values
  • Aliases: A list of currently supported Aliases (alternate element names)
  • For valid elements with shared data, on the far left is a Filter button you can use to view a summary of shared data for that element and apply a query filter to your Cart based on selected value ranges

At the top of this page you can also:

  • Use the search bar to filter the elements displayed. This will not filter on the Size of Required columns
  • Download a copy of this definition in CSV format
  • Download a blank CSV submission template prepopulated with the correct structure header rows ready to fill with subject records and upload

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