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Data Structures with shared data
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Genomics Subject

61,117 Shared Subjects

Basic information about a study subject related to a genomics experiment including demographics, pedigree, and diagnosis/phenotype
Omics
Resolve Identifiers
06/08/2011
genomics_subject02
07/14/2022
View Change History
02
Query Element Name Data Type Size Required Condition Description Value Range Notes Aliases
subjectkey GUID Required The NDAR Global Unique Identifier (GUID) for research subject NDAR*
src_subject_id String 20 Required Subject ID how it's defined in lab/project
interview_date Date Required Date on which the interview/genetic test/sampling/imaging/biospecimen was completed. MM/DD/YYYY
interview_age Integer Required Age in months at the time of the interview/test/sampling/imaging. 0 :: 1260 Age is rounded to chronological month. If the research participant is 15-days-old at time of interview, the appropriate value would be 0 months. If the participant is 16-days-old, the value would be 1 month.
sex String 20 Required Sex of subject at birth M;F; O; NR M = Male; F = Female; O=Other; NR = Not reported
Query race String 30 Required Race of study subject American Indian/Alaska Native; Asian; Hawaiian or Pacific Islander; Black or African American; White; More than one race; Unknown or not reported; Other Non-White; Other
ethnic_group String 255 Recommended Ethnic group
Query phenotype String 200 Required Phenotype/diagnosis for the subject
Query phenotype_description String 4,000 Recommended Description of the phenotype for the subject
Query twins_study String 100 Required Is this study of twins?
Yes;No
Query sibling_study String 50 Required Was it sibling study? Study of sibling(s) of autistic child.
Yes;No
Query family_study String 100 Required Was it family study? Study of biological mother, biological father and/or sibling of proband.
Yes;No
family_user_def_id String 25 Conditional family_study == 'Yes' Family Pedigree User-Defined ID
subjectkey_mother GUID Recommended The NDAR Global Unique Identifier (GUID) for subject's biological mother NDAR*
subjectkey_father GUID Recommended The NDAR Global Unique Identifier (GUID) for subject's biological father NDAR*
subjectkey_sibling1 GUID Recommended The NDAR Global Unique Identifier (GUID) for subject's sibling NDAR*
Query sibling_type1 String 255 Recommended Type of Sibling
Full Brother FB; Half Mother Brother HMB; Half Father Brother HFB; Full Sister FS; Half Mother Sister HMS; Half Father Sister HFS; Adopted Brother AB; Adopted Sister AS; Unknown
subjectkey_sibling2 GUID Recommended The NDAR Global Unique Identifier (GUID) for subject's sibling NDAR*
Query sibling_type2 String 255 Recommended sibling type
Full Brother FB; Half Mother Brother HMB; Half Father Brother HFB; Full Sister FS; Half Mother Sister HMS; Half Father Sister HFS; Adopted Brother AB; Adopted Sister AS; Unknown
subjectkey_sibling3 GUID Recommended The NDAR Global Unique Identifier (GUID) for subject's sibling NDAR*
Query sibling_type3 String 255 Recommended sibling type
Full Brother FB; Half Mother Brother HMB; Half Father Brother HFB; Full Sister FS; Half Mother Sister HMS; Half Father Sister HFS; Adopted Brother AB; Adopted Sister AS; Unknown
subjectkey_sibling4 GUID Recommended The NDAR Global Unique Identifier (GUID) for subject's sibling NDAR*
Query sibling_type4 String 255 Recommended sibling type
Full Brother FB; Half Mother Brother HMB; Half Father Brother HFB; Full Sister FS; Half Mother Sister HMS; Half Father Sister HFS; Adopted Brother AB; Adopted Sister AS; Unknown
Query zygosity String 255 Conditional twins_study == 'Yes' Zygosity
monozygous; dizygous; trizygotic; 999
999=unknown
Query sample_taken String 50 Required Was a sample taken at this interview/during this project time
Yes;No
sample_id_original String 100 Conditional sample_taken == 'Yes' Original, user-defined Sample ID
Query sample_description String 3,500 Conditional sample_taken == 'Yes' Sample description: tissue type, i.e. blood, saliva, brain etc. whole blood; saliva; brain; urine; serum; plasma; CSF; IPS; Fibroblast; Neuronal Progenitor; skin biopsy; temporal cortex; lymphoblastoid cell line; unknown; semen; frontal cortex; parietal cortex; basal ganglia; Placenta; hair; occipital visual cortex; cerebellum; spleen; stool; muscle; kidney; liver; heart; cord blood; nasal swab; DNA; RNA; breastmilk
Query biorepository String 100 Conditional sample_taken == 'Yes' Sample provider: i.e. NIMH_Genetics; ATP; Correil
patient_id_biorepository String 100 Conditional notNull(biorepository) Biorepository Patient ID
sample_id_biorepository String 100 Conditional notNull(biorepository) Biorepository Sample ID
cell_id_original String 100 Recommended Original, user-defined cell line ID
cell_id_biorepository String 100 Recommended Biorepository cell line ID
adi_dx String 15 Recommended ADI: Diagnosis
Query ados_dx String 15 Recommended ADOS Diagnosis
ethnicity String 30 Recommended Ethnicity of participant Hispanic or Latino; Not Hispanic or Latino; Unknown
site String 101 Recommended Site Study Site
longform_id String 50 Recommended Long form of Subject ID
visit String 60 Recommended Visit name
Data Structure

This page displays the data structure defined for the measure identified in the title and structure short name. The table below displays a list of data elements in this structure (also called variables) and the following information:

  • Element Name: This is the standard element name
  • Data Type: Which type of data this element is, e.g. String, Float, File location.
  • Size: If applicable, the character limit of this element
  • Required: This column displays whether the element is Required for valid submissions, Recommended for valid submissions, Conditional on other elements, or Optional
  • Description: A basic description
  • Value Range: Which values can appear validly in this element (case sensitive for strings)
  • Notes: Expanded description or notes on coding of values
  • Aliases: A list of currently supported Aliases (alternate element names)
  • For valid elements with shared data, on the far left is a Filter button you can use to view a summary of shared data for that element and apply a query filter to your Cart based on selected value ranges

At the top of this page you can also:

  • Use the search bar to filter the elements displayed. This will not filter on the Size of Required columns
  • Download a copy of this definition in CSV format
  • Download a blank CSV submission template prepopulated with the correct structure header rows ready to fill with subject records and upload

Please email the The NDA Help Desk with any questions.