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Filter Cart

The Filter Cart provides a powerful way to query and access data for which you may be interested.  

A few points related to the filter cart are important to understand with the NDA Query/Filter implementation: 

First, the filter cart is populated asyncronously.  So, when you run a query, it may take a moment to populate but this will happen in the background so you can define other queries during this time.  

When you are adding your first filter, all data associated with your query will be added to the filter cart (whether it be a collection, a concept, a study, a data structure/elment or subjects). Not all data structures or collections will necessarily be displayed.  For example, if you select the NDA imaging structure image03, and further restrict that query to scan_type fMRI, only fMRI images will appear and only the image03 structure will be shown.  To see other data structures, select "Find All Subject Data" which will query all data for those subjects. When a secord or third filter is applied, an AND condition is used.  A subject must exist in all filters.  If the subject does not appear in any one filter, that subjects data will not be included in your filter cart. If that happens, clear your filter cart, and start over.  

It is best to package more data than you need and access those data using other tools, independent of the NDA (e.g. miNDAR snapshot), to limit the data selected.  If you have any questions on data access, are interested in using avaialble web services, or need help accessing data, please contact us for assistance.  

Frequently Asked Questions

Glossary

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NDA provides a single access to de-identified autism research data. For permission to download data, you will need an NDA account with approved access to NDA or a connected repository (AGRE, IAN, or the ATP). For NDA access, you need to be a research investigator sponsored by an NIH recognized institution with federal wide assurance. See Request Access for more information.

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Data Structures with shared data
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Hormone Measurment Form

295 Shared Subjects

N/A
Clinical Assessments
Phys Exam
08/28/2015
hormone01
11/20/2017
View Change History
01
Query Element Name Data Type Size Required Description Value Range Notes Aliases
subjectkey GUID Required The NDAR Global Unique Identifier (GUID) for research subject NDAR*
src_subject_id String 20 Required Subject ID how it's defined in lab/project
interview_date Date Required Date on which the interview/genetic test/sampling/imaging/biospecimen was completed. MM/DD/YYYY Required field
interview_age Integer Required Age in months at the time of the interview/test/sampling/imaging. 0 :: 1260 Age is rounded to chronological month. If the research participant is 15-days-old at time of interview, the appropriate value would be 0 months. If the participant is 16-days-old, the value would be 1 month.
sex String 20 Required Sex of the subject M;F M = Male; F = Female gender
Query sample_description String 3,500 Required Sample description: tissue type, i.e. blood, saliva, brain etc. whole blood; saliva; brain; urine; serum; plasma; CSF; IPS; Fibroblast; Neuronal Progenitor; skin biopsy; temporal cortex; lymphoblastoid cell line; unknown; semen; frontal cortex; parietal cortex; basal ganglia; Placenta; hair; occipital visual cortex; cerebellum; spleen; stool; muscle; kidney; liver; heart; cord blood
sample_id_original String 100 Recommended Original, user-defined Sample ID sampleid
salimetricsid String 25 Recommended ID assigned by Salimetrics
Query batchnum String 15 Recommended Batch number assay_batch
Query dhea_rep1 Float Recommended dhea repeated measurements 1 hormone_scr_dhea_rep1
Query dhea_rep2 Float Recommended dhea repeated measurements 2 hormone_scr_dhea_rep2
Query saliva_dhea_collection1_mean Float Recommended Saliva Measures: DHEA level mean value for the first saliva collection (pg/ml) dhea_mean_pgml, hormone_scr_dhea_mean
Query estradiol_rep1 Float Recommended estradiol repeated measurements 1
Query estradiol_rep2 Float Recommended estradiol repeated measurements 2
Query saliva_estradiol_collect1_mean Float Recommended Saliva Measures: Estradiol level mean value for the first saliva collection (pg/ml) estradiol_mean_pgml
Query dheas_rep1 Float Recommended dheas repeated measurements 1
Query dheas_rep2 Float Recommended dheas repeated measurements 2
Query dheas_mean_pgml Float Recommended dheas Mean (pg/mL)
Query testosterone_rep1 Float Recommended testosterone repeated measurements 1
Query testosterone_rep2 Float Recommended testosterone repeated measurements 2
Query saliva_testosterone_c1_mean Float Recommended Saliva Measures: Testosterone level mean value for the first saliva collection (pg/ml) testosterone_mean_pgml
hormone_scr_dhea_rep1_ll String 30 Recommended Salimetrics hormone test DHEA below lower limit of sensitivity (repetition 1)
hormone_scr_dhea_rep1_qns String 30 Recommended Salimetrics hormone test DHEA quality not sufficient (repetition 1)
hormone_scr_dhea_rep1_nd String 30 Recommended Salimetrics hormone test DHEA none detected (repetition 1)
hormone_scr_dhea_rep2_ll String 30 Recommended Salimetrics hormone test DHEA below lower limit of sensitivity (repetition 2)
hormone_scr_dhea_rep2_qns String 30 Recommended Salimetrics hormone test DHEA quality not sufficient (repetition 2)
hormone_scr_dhea_rep2_nd String 30 Recommended Salimetrics hormone test DHEA none detected (repetition 2)
Query hormone_scr_hse_mean Float Recommended Salimetrics hormone test estradiol (HSE) mean of measures (pg/mL)
Query hormone_scr_hse_rep1 Float Recommended Salimetrics hormone test estradiol (HSE) repetition 1 (pg/mL)
hormone_scr_hse_rep1_ll String 30 Recommended Salimetrics hormone test estradiol (HSE) below lower limit of sensitivity (repetition 1)
hormone_scr_hse_rep1_qns String 30 Recommended Salimetrics hormone test estradiol (HSE) quality not sufficient (repetition 1)
hormone_scr_hse_rep1_nd String 30 Recommended Salimetrics hormone test estradiol (HSE) none detected (repetition 1)
Query hormone_scr_hse_rep2 Float Recommended Salimetrics hormone test estradiol (HSE) repetition 2 (pg/mL)
hormone_scr_hse_rep2_ll String 30 Recommended Salimetrics hormone test estradiol (HSE) below lower limit of sensitivity (repetition 2)
hormone_scr_hse_rep2_qns String 30 Recommended Salimetrics hormone test estradiol (HSE) quality not sufficient (repetition 2)
hormone_scr_hse_rep2_nd String 30 Recommended Salimetrics hormone test estradiol (HSE) none detected (repetition 2)
Query hormone_scr_ert_mean Float Recommended Salimetrics hormone test testosterone (ERT) mean of measures (pg/mL)
Query hormone_scr_ert_rep1 Float Recommended Salimetrics hormone test testosterone (ERT) repetition 1 (pg/mL)
hormone_scr_ert_rep1_ll String 30 Recommended Salimetrics hormone test testosterone (ERT) below lower limit of sensitivity (repetition 1)
hormone_scr_ert_rep1_qns String 30 Recommended Salimetrics hormone test testosterone (ERT) quality not sufficient (repetition 1)
hormone_scr_ert_rep1_nd String 30 Recommended Salimetrics hormone test testosterone (ERT) none detected (repetition 1)
Query hormone_scr_ert_rep2 Float Recommended Salimetrics hormone test testosterone (ERT) repetition 2 (pg/mL)
hormone_scr_ert_rep2_ll String 30 Recommended Salimetrics hormone test testosterone (ERT) below lower limit of sensitivity (repetition 2)
hormone_scr_ert_rep2_qns String 30 Recommended Salimetrics hormone test testosterone (ERT) quality not sufficient (repetition 2)
hormone_scr_ert_rep2_nd String 30 Recommended Salimetrics hormone test Salimetrics hormone test testosterone (ERT) quality not sufficient (repetition 2) none detected (repetition 2)
visit String 50 Recommended Visit name eventname
Data Structure

This page displays the data structure defined for the measure identified in the title and structure short name. The table below displays a list of data elements in this structure (also called variables) and the following information:

  • Element Name: This is the standard element name
  • Data Type: Which type of data this element is, e.g. String, Float, File location.
  • Size: If applicable, the character limit of this element
  • Required: This column displays whether the element is Required for valid submissions, Recommended for valid submissions, Conditional on other elements, or Optional
  • Description: A basic description
  • Value Range: Which values can appear validly in this element (case sensitive for strings)
  • Notes: Expanded description or notes on coding of values
  • Aliases: A list of currently supported Aliases (alternate element names)
  • For valid elements with shared data, on the far left is a Filter button you can use to view a summary of shared data for that element and apply a query filter to your Cart based on selected value ranges

At the top of this page you can also:

  • Use the search bar to filter the elements displayed. This will not filter on the Size of Required columns
  • Download a copy of this definition in CSV format
  • Download a blank CSV submission template prepopulated with the correct structure header rows ready to fill with subject records and upload

Please email the The NDA Help Desk with any questions.