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Filter Cart

Viewable at the top right of NDA pages, the Filter Cart is a temporary holder for filters and data they select. Filters are added to the Workspace first, before being submitted to The Filter Cart. Data selected by filters in the Filter Cart can be added to a Data Package or an NDA Study from the Data Packaging Page, by clicking the 'Create Data Package / Add Data to Study' button.

The filter cart supports combining multiple filters together, and depending on filter type will use "AND" or "OR"  when combining filters.

Multiple selections from the same filter type will result in those selections being applied with an ‘OR’ condition. For example, if you add an NDA Collection Filter with selections for both collections 2112 and 2563 to an empty Workspace, the subjects from NDA Collection 2112 ‘OR’ NDA Collection 2563 will be added to your Workspace even if a subject is in both NDA Collections. You can then add other NDA Collections to your Workspace which further extends the ‘OR’ condition.

If a different filter type is added to your Workspace, or a filter has already been submitted to the Filter Cart, the operation then performs a logical ‘AND’ operation. This means that given the subjects returned from the first filter, only those subjects that matched the first filter are returned by the second filter (i.e., subjects that satisfied both filters). Note that only the subjects specific to your filter will be added to your Filter Cart and only on data shared with the research community. Other data for those same subjects may exist (i.e., within another NDA Collection, associated with a data structure that was not requested in the query, etc.). So, users should select ‘Find all Subjects Data’ to identify all data for those specific subjects. 

Additional Tips:

  • You may query the data without an account, but to gain access you will need to create an NDA user account and apply for access.  Most data access requires that you or your lab are sponsored by an NIH recognized institution with Federal Wide Assurance (FWA).  Without access, you will not be able to obtain individual-level data. 

    Once you have selected data of interest you can:
  • Create a data package - This allows you to specify format for access/download
  • Assign to Study Cohort - Associate the data to an NDA Study allowing for a DOI to be generated and the data to be linked directly to a finding, publication, or data release. 
  • Find All Subject Data - Depending on filter types being used, not all data associated with a subject will be selected.  Data may be restricted by data structure, NDA Collection, or outcome variables (e.g., NDA Study). ‘Find All Data’ expands the fliter criteria by replacing all filters in your Filter Cart with a single Query by GUID filter for all subjects selected by those filters.

    Please Note:
  • When running a query, it may take a moment to populate the Filter Cart. Queries happen in the background so you can define other queries during this time. 
  • When you add your first filter, all data associated with your query will be added to the Filter Cart (e.g., a Concept, an NDA Collection, a Data Structure/Element, etc.). As you add additional filters, they will also display in the Filter Cart. Only the name of filter will be shown in the Filter Cart, not the underlying structures. 
  • Information about the contents of the Filter Cart can be seen by clicking "Edit”.
  • Once your results appear in the Filter Cart, you can create a data package or assign subjects to a study by selecting the 'Package/Assign to Study' option. You can also 'Edit' or 'Clear' filters.
     

Frequently Asked Questions

  • The Filter Cart currently employs basic AND/OR Boolean logic. A single filter may contain multiple selections for that filter type, e.g., a single NDA Study filter might contain NDA Study 1 and NDA Study 2. A subject that is in EITHER 1 OR 2 will be returned.  Adding multiple filters to the cart, regardless of type, will AND the result of each filter.  If NDA Study 1 and NDA Study 2 are added as individual filters, data for a subject will only be selected if the subject is included in  BOTH 1 AND 2.

  • Viewable at the top right of NDA pages, the Filter Cart is a temporary holder of data identified by the user, through querying or browsing, as being of some potential interest. The Filter Cart is where you send the data from your Workspace after it has been filtered.

  • After filters are added to the Filter Cart, users have options to ‘Create a Package’ for download, ‘Associate to Study Cohort’, or ‘Find All Subject Data’. Selecting ‘Find All Subject Data’ identifies and pulls all data for the subjects into the Filter Cart. Choosing ‘Create a Package’ allows users to package and name their query information for download. Choosing ‘Associate to Study Cohort’ gives users the opportunity to choose the Study Cohort they wish to associate this data.

Glossary

  • Once your filter cart contains the subjects of interest, select Create Data Package/Assign to Data Study which will provide options for accessing item level data and/or assigning to a study.  

  • Once queries have been added to your workspace, the next step is to Submit the Filters in the workspace to the Filter Cart.  This process runs the queries selected, saving the results within a filter cart attached to your account.  

  • The Workspace within the General Query Tool is a holding area where you can review your pending filters prior to adding them to Filter Cart. Therefore, the first step in accessing data is to select one or more items and move it into the Workspace. 

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NDA provides a single access to de-identified autism research data. For permission to download data, you will need an NDA account with approved access to NDA or a connected repository (AGRE, IAN, or the ATP). For NDA access, you need to be a research investigator sponsored by an NIH recognized institution with federal wide assurance. See Request Access for more information.

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Data Structures with shared data
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Current Menstrual State and Menstrual History

285 Shared Subjects

N/A
Clinical Assessments
Med History
03/22/2017
mchq01
11/18/2019
View Change History
01
Query Element Name Data Type Size Required Description Value Range Notes Aliases
subjectkey GUID Required The NDAR Global Unique Identifier (GUID) for research subject NDAR*
src_subject_id String 20 Required Subject ID how it's defined in lab/project hcpa_id, subject_id
interview_date Date Required Date on which the interview/genetic test/sampling/imaging/biospecimen was completed. MM/DD/YYYY Required field date_ctq, v2_ctq_date
interview_age Integer Required Age in months at the time of the interview/test/sampling/imaging. 0 :: 1260 Age is rounded to chronological month. If the research participant is 15-days-old at time of interview, the appropriate value would be 0 months. If the participant is 16-days-old, the value would be 1 month. v2_ctq_age
sex String 20 Required Sex of the subject M;F; O; NR M = Male; F = Female; O=Other; NR = Not reported gender, sex
Query hysterec Integer Recommended hysterectomy
0;1;-7; 888; 999
0=No; 1=Yes; -7=Refused; 888=N/A; 999=missing data mchq_1
Query hystage Integer Recommended age at hysterectomy 888=N/A; 999=missing data mchq_2
Query mchq_3 Integer Recommended Removal of one or both ovaries? 1;2; 888; 999 1=Yes; 2=No; 888=N/A; 999=missing data
Query mchq_4 Integer Recommended Removal of one or both ovaries - Age of Surgery 1::100; 888; 999 888=N/A; 999=missing data
Query mchq_5 Integer Recommended Polycystic Ovary Disease (Stein-Leventhal Syndrome)
1;2; 888; 999
1=Yes; 2=No; 888=N/A; 999=missing data gynecological_hist_4a
Query mchq_6 Integer Recommended Polycystic Ovary Disease (Stein-Leventhal Syndrome) - Age of Onset 1::100; 888; 999 888=N/A; 999=missing data
Query mchq_7 Integer Recommended Abnormal pap smear? 1;2; 888; 999 1=Yes; 2=No; 888=N/A; 999=missing data
Query mchq_8 Integer Recommended Abnormal pap smear - Age of Onset 1::100; 888; 999 888=N/A; 999=missing data
Query endomsis Integer Recommended endometriosis
0;1;-7; 888;999
0=No; 1=Yes; -7=Refused; 888=N/A; 999=missing data mchq_9
Query mchq_10 Integer Recommended Endometriosis - Age of Onset 1::100; 888; 999 888=N/A; 999=missing data
Query mchq_11 Integer Recommended Pelvic Inflammatory Disease (infection of your womb tubes)? 1;2; 888; 999 1=Yes; 2=No; 888=N/A; 999=missing data
Query mchq_12 Integer Recommended Pelvic Inflammatory Disease (infection of your womb tubes) - Age of Onset 1::100; 888; 999 888=N/A; 999=missing data
Query mchq_13 Integer Recommended Amenorrhea (? 3 months without a period when not pregnant)?
1;2; 888; 999
1=Yes; 2=No; 888=N/A; 999=missing data gynecological_hist_4c
Query mchq_14 Integer Recommended Amenorrhea (? 3 months without a period when not pregnant) - Age of Onset 1::100; 888; 999 888=N/A; 999=missing data
scq_23_sp String 100 Recommended Specify any other gynecological problem mchq_15
Query mchq_16 Integer Recommended Other Gynecological condition - Age of Onset 1::100; 888; 999 888=N/A; 999=missing data
Query mchq_17 Integer Recommended Do you have regular menstrual cycles? 1;2; 888; 999 1=Yes; 2=No; 888=N/A; 999=missing data mstrl2
mchq_18 String 100 Recommended Do you have regular menstrual cycles. If no, explain mstrl2_reason
Query femenst Float Recommended Age (in years) at First Menstrual Period 1::100; 888; 999 888=N/A; 999=missing data gynecological_hist_9, mchq_19, mstrl2_age
Query mchq_20 Integer Recommended At what age did your mother have her very first period? 1::100; 888; 999 888=N/A; 999=missing data
Query mchq_21 Integer Recommended About how long is your entire cycle? 1; 2; 3 1= less than every 25 days; 2= between 25-35 days; 3= more than every 35 days mstrl2_cycle
mchq_23 Date Recommended When was the previous menstrual period (before the last menstrual period
Query mchq_24 Integer Recommended Do you remember when you first started developing breasts (age)? 1::100; 888; 999 888=N/A; 999=missing data
Query mchq_25 Integer Recommended If you are not having regular periods: At what age did your periods become irregular 1::100; 888; 999 888=N/A; 999=missing data
Query mchq_26 Integer Recommended If you are not getting your periods: at what age did they stop 1::100; 888; 999 888=N/A; 999=missing data
Query mchq_27 Integer Recommended If your periods were irregular before the age of 15, how many periods per year on average have you had from the age at your first period to 15 years 0 :: 1260; 888; 999 888=N/A; 999=missing data
Query mchq_28 Integer Recommended If your periods were irregular during ages 16-18, how many periods per year on average have you had from 16-18 years old 0 :: 1260; 888; 999 888=N/A; 999=missing data
Query mchq_29 Integer Recommended If your periods were irregular during ages 19-21, how many periods per year on average have you had from 19-21 years old 0 :: 1260; 888; 999 888=N/A; 999=missing data
Query mchq_30 Integer Recommended If your periods were irregular during ages 22-25, how many periods per year on average have you had from 22-25 years old 0 :: 1260; 888; 999 888=N/A; 999=missing data
mchq_31 String 100 Recommended What kind of sports activities (team or solo) are you engaged in?
Query mchq_32 Integer Recommended How many hours per week do you typically spend on this activity? 0 :: 200; 888; 999 888=N/A; 999=missing data
Query mchq_33 Integer Recommended At what age did this activity begin? 1::100; 888; 999 888=N/A; 999=missing data
Query mchq_34 Integer Recommended Is the activity on going? 1;2; 888; 999 1=Yes; 2=No; 888=N/A; 999=missing data
Query mchq_35 Integer Recommended If it is not ongoing, when did you stop this activity? (activity age in years) 1::100; 888; 999 888=N/A; 999=missing data
Query mchq_36 Integer Recommended Do you currently use a hormonal contraceptive (oral, implant, patch, or hormone-secreting IUD) or are you on any hormone therapy?
1;2; 888; 999
1=Yes; 2=No; 888=N/A; 999=missing data mcq_03a
Query mchq_37 String 25 Recommended If yes, please list contraceptive using the code below 1=OC's for contraception; 2=OC's primarily for menstrual regulation; 3=Other estradiol for menstrual regulation; 4=progesterone for menstrual regulation; 5=fertility therapy; 6=other; 7=unknown
meau_01b Date Recommended When was the first day of your last menstrual period? mchq_38, mcq_01, mcq_04, mstrl2_last
mchq_39 Date Recommended Can you approximate, based on your experience, when you expect the onset of your next period? mcq_03
labsample29 String 10 Recommended Date of last menstrual period NA=if male or pre-puberty mpdatm
Query gynecological_hist_2 String 300 Recommended How many times have you been pregnant including miscarriages or abortions? If this does not apply to you, type "0".
Query gynecological_hist_3b Integer Recommended What was this first hormone used for? 1::6 1 = Birth control for contraception ; 2 = Birth control for menstrual regulation ; 3 = Estrogen pill for menstrual regulation ; 4 = Progesterone pill for menstrual regulation ; 5 = Other ; 6 = unknown
gynecological_hist_3c String 100 Recommended At what age did you begin using this first hormone?
Query gynecological_hist_3d Integer Recommended How many months did you use this first hormone for? Please only write the number of months (i.e., enter "6" for 6 months of use)
Query gynecological_hist_3e Integer Recommended Have you used another female hormone? 0;1 0 = No; 1 = Yes
Query gynecological_hist_3b_2 Integer Recommended What was this second hormone used for? 1::6 1 = Birth control for contraception ; 2 = Birth control for menstrual regulation ; 3 = Estrogen pill for menstrual regulation ; 4 = Progesterone pill for menstrual regulation ; 5 = Other ; 6 = unknown
gynecological_hist_3c_2 String 100 Recommended At what age did you begin using this second hormone?
Query gynecological_hist_3d_2 Integer Recommended How many months did you use this second hormone for? Please only write the number of months (i.e., enter "6" for 6 months of use)
Query gynecological_hist_3e_2 Integer Recommended Have you used another female hormone? 0;1 0 = No; 1 = Yes
Query gynecological_hist_3b_3 Integer Recommended What was this third hormone used for? 1::6 1 = Birth control for contraception ; 2 = Birth control for menstrual regulation ; 3 = Estrogen pill for menstrual regulation ; 4 = Progesterone pill for menstrual regulation ; 5 = Other ; 6 = unknown
gynecological_hist_3c_3 String 100 Recommended At what age did you begin using this third hormone?
Query gynecological_hist_3d_3 Integer Recommended How many months did you use this third hormone for? Please only write the number of months (i.e., enter "6" for 6 months of use)
Query gynecological_hist_3e_3 Integer Recommended Have you used another female hormone? 0;1 0 = No; 1 = Yes
Query gynecological_hist_3b_4 Integer Recommended What was this fourth hormone used for? 1::6 1 = Birth control for contraception ; 2 = Birth control for menstrual regulation ; 3 = Estrogen pill for menstrual regulation ; 4 = Progesterone pill for menstrual regulation ; 5 = Other ; 6 = unknown
gynecological_hist_3c_4 String 100 Recommended At what age did you begin using this fourth hormone?
Query gynecological_hist_3d_4 Integer Recommended How many months did you use this fourth hormone for? Please only write the number of months (i.e., enter "6" for 6 months of use)
Query gynecological_hist_3e_4 Integer Recommended Have you used another female hormone? 0;1 0 = No; 1 = Yes
Query gynecological_hist_3b_5 Integer Recommended What was this fifth hormone used for? 1::6 1 = Birth control for contraception ; 2 = Birth control for menstrual regulation ; 3 = Estrogen pill for menstrual regulation ; 4 = Progesterone pill for menstrual regulation ; 5 = Other ; 6 = unknown
gynecological_hist_3c_5 String 100 Recommended At what age did you begin using this fifth hormone?
Query gynecological_hist_3d_5 Integer Recommended How many months did you use this fifth hormone for? Please only write the number of months (i.e., enter "6" for 6 months of use)
Query gynecological_hist_4b Integer Recommended Hirsutism (excessive hair growth, especially on face) 0;1 0 = No; 1 = Yes
Query gynecological_hist_4d Integer Recommended Galactorrhea (breast milk production when not pregnant or lactating) 0;1 0 = No; 1 = Yes
Query gynecological_hist_6 Integer Recommended Are your/your child's menstrual cycles regular now? In other words, is the onset of each period generally predictable within 5 days? 0;1 0 = No; 1 = Yes
Query gynecological_hist_7 Integer Recommended On average, how regularly do you have a period? 1::3 1 = Less than every 25 days ; 2 = Between 25-35 days ; 3 = More than every 35 days
Query gynecological_hist_8 Integer Recommended How many days does your period usually flow? Please write an integer (i.e., write 5 for 5 days)
Query pregev Integer Recommended Have you ever been pregnant 0;1 0=No; 1=Yes gynecological_hist_1
medication1_name String 500 Recommended Name first medication that the participant has taken 0 = No medication; 999= Legitimately skipped gynecological_hist_3a
medication2_name String 200 Recommended Name second medication that the participant has taken 0 = No medication; 999= Legitimately skipped gynecological_hist_3a_2
medication3_name String 150 Recommended Name third medication that the participant has taken 0 = No medication; 999= Legitimately skipped gynecological_hist_3a_3
medication4_name String 100 Recommended Name fourth medication that the participant has taken 0 = No medication; 999= Legitimately skipped gynecological_hist_3a_4
medication5_name String 500 Recommended Name fifth medication that the participant has taken 0 = No medication; 999= Legitimately skipped gynecological_hist_3a_5
daylastpd String 30 Recommended First day of last menstrual period ( in days/months/years ago) gynecological_hist_5, men_start
Query bcpever Integer Recommended ever taken birth control pills or progesterone 0;1;-7 0=No; 1=Yes; -7=Refused gynecological_hist_3
Query pds6g Integer Recommended Girls only : Have you begun to menstruate? 0;1;99 0=No; 1=Yes; 99 = Refused men_period
Query regmense Integer Recommended Regular menstrual periods 0;1; 999 0=No;1=Yes; 999=NA men_reg
Query rlhq2q1 Integer Recommended Current use of ORAL contraceptive pills?
1;2
1=Yes; 2=No men_contr
rev_endohypothyroidism String 50 Recommended Hypothyroidism
Yes;No;NK
NK = Not known mstrl1a
hyperthyroid String 20 Recommended Hyperthyroidism
Yes;No;999
999=NA/missing mstrl1b
scq_24_a Integer Recommended Has a doctor ever told you that you have-Any other endocrine or hormone problem
0;1
0 = No;1 = Yes mstrl1c
mhx016b String 250 Recommended If YES, Enter onset/resolved date indicate ongoing with treatment or not. If NOT EVALUATED, explain or describe below: Endocrine disorder mstrl1c_age
hypoage String 50 Recommended age diagnosed hypothyroidism mstrl1a_age
hyperage String 50 Recommended age diagnosed hyperthyroidism mstrl1b_age
straw1 Integer Recommended Have you had a period in the past year (12 months)? 0;1 1 = Yes ; 0 = No
straw1a Integer Recommended When was your last period? Choose one of the following. 1::4 1 = less than two years ago ; 2 = 2-3 years ago ; 3 = 3-6 years ago ; 4 = more than 6 years ago
straw1b Integer Recommended Why do you think your periods stopped? Please choose the best answer below. (read through all). 1::7;999 1 = They stopped naturally as a I grew older and became postmenopausal - done with 'the change'? ; 2 = I have had a hysterectomy or endometrial ablation. ; 3 = I am pregnant or breast feeding. ; 4 = I am taking medications such as a birth control injection or an intrauterine device (eg, Mirena IUD) that makes my periods stop. ; 5 = I had chemotherapy and/or other treatments for cancer, and my periods stopped. ; 6 = I have dramatic weight loss (for example due to HIV or other medical condition or stressful/traumatic life experience) and my periods stopped. ; 7 = Other ; 999 = Don't know
straw1b_other String 115 Recommended If other reason you think your periods stopped, fill in:
straw2 Integer Recommended In the past 12 months, have you skipped or missed a period? In other words, have you ever gone 60 days, or two months, without a period? 0;1 1 = Yes ; 0 = No
straw2a Integer Recommended Did you skip periods because you are getting older? (yes/no/don't know) 0;1;999 1 = Yes ; 0 = No ; 999 = Don't Know
straw2b Integer Recommended Choose one of the following reasons why you skipped periods. 1::5;999 1 = I am/was pregnant or breast feeding. ; 2 = I have had a hysterectomy or endometrial ablation. ; 3 = I am/was taking medications such as a birth control injection that makes my periods stop. ; 4 = I had chemotherapy and my periods stopped. ; 5 = Other ; 999 = Don't know
straw2b_other String 100 Recommended If other reason you have skipped periods, fill in:
straw3 Integer Recommended Have you noticed that your period comes earlier or later than you expected? 0;1 1 = Yes ; 0 = No
straw3a Integer Recommended Has your period come late or early by at least a week? 0;1;999 1 = Yes ; 0 = No ; 999 = Don't Know
straw3b Integer Recommended Did your period come late or early by at least a week two times or more over the past year (12 months)? 0;1 1 = Yes ; 0 = No
straw4a Integer Recommended Have you noticed that the length of your period (# of bleeding days) is shorter or longer than usual for you? 0;1;999 1 = Yes ; 0 = No ; 999 = Don't Know
straw4b Integer Recommended Have you noticed that the amount of bleeding during your period is more or less compared to what is normal for you? 0;1;999 1 = Yes ; 0 = No ; 999 = Don't Know
straw_code Float Recommended Stages of Reproductive Aging Workshop (STRAW) code 1.11;1.12;1.13;1.14;1.21;1.22;2;2.2;3;4.1;4.2;1.11002;1.12002;1.13002;1.14002;1.11004;1.12004;1.13004;1.14004;1.11007;1.12007;1.13007;1.14007;2.2001;2.2003 1.11 = Postmenopausal: plus 1a; 1.12 = Postmenopausal: plus 1b ; 1.13 = Postmenopausal: plus 1c; 1.14 = Postmenopausal: plus 2; 1.21 = Postmenopausal; 1.22 = No periods for 12 months other reason; 2 = Late Transition; 2.2 = Skipped periods not necessarily due to natural menopause; 3 = Early Transition ; 4.1 = Late Reproductive (i.e., late premenopausal); 4.2 = Reproductive(i.e., premenopausal); 1.11002 = Postmenopausal plus 1a, no periods for 12 months other reason. ;1.12002 = Postmenopausal plus 1b, no periods for 12 months other reason. ;1.13002 = Postmenopausal plus 1c, no periods for 12 months other reason. ;1.14002 = Postmenopausal plus 2, no periods for 12 months other reason.;1.11004 = Postmenopausal plus 1a, no periods for 12 months, IUD, Norplant, etc.. ;1.12004 = Postmenopausal plus 1b, no periods for 12 months, IUD, Norplant, etc.. ;1.13004 = Postmenopausal plus 1c, no periods for 12 months, IUD, Norplant, etc.. ;1.14004 = Postmenopausal plus 2, no periods for 12 months, IUD, Norplant, etc..;1.11007 = Postmenopausal plus 1a, unknown. ;1.12007 = Postmenopausal plus 1b, unknown. ;1.13007 = Postmenopausal plus 1c, unknown. ;1.14007 = Postmenopausal plus 2, unknown.;2.2001 = Skipped periods not necessarily due to natural menopause. ;2.2003 = Skipped periods, birth control injection or other med. - codes are explained in https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3580996/
mcq_02 String 20 Recommended About how long is your entire cycle (days)?
Data Structure

This page displays the data structure defined for the measure identified in the title and structure short name. The table below displays a list of data elements in this structure (also called variables) and the following information:

  • Element Name: This is the standard element name
  • Data Type: Which type of data this element is, e.g. String, Float, File location.
  • Size: If applicable, the character limit of this element
  • Required: This column displays whether the element is Required for valid submissions, Recommended for valid submissions, Conditional on other elements, or Optional
  • Description: A basic description
  • Value Range: Which values can appear validly in this element (case sensitive for strings)
  • Notes: Expanded description or notes on coding of values
  • Aliases: A list of currently supported Aliases (alternate element names)
  • For valid elements with shared data, on the far left is a Filter button you can use to view a summary of shared data for that element and apply a query filter to your Cart based on selected value ranges

At the top of this page you can also:

  • Use the search bar to filter the elements displayed. This will not filter on the Size of Required columns
  • Download a copy of this definition in CSV format
  • Download a blank CSV submission template prepopulated with the correct structure header rows ready to fill with subject records and upload

Please email the The NDA Help Desk with any questions.