NIMH Data Archive - Data

Genomics

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Phenotype¹

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¹ Numbers reported are subjects by age

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Format should be in the following format: Activity Code, Institute Abbreviation, and Serial Number. Grant Type, Support Year, and Suffix should be excluded. For example, grant 1R01MH123456-01A1 should be entered R01MH123456

Collection - Use Existing Experiment

To associate an experiment to the current collection, just select an axperiment from the table below then click the associate experiment button to persist your changes (saving the collection is not required). Note that once an experiment has been associated to two or more collections, the experiment will not longer be editable.

The table search feature is case insensitive and targets the experiment id, experiment name and experiment type columns. The experiment id is searched only when the search term entered is a number, and filtered using a startsWith comparison. When the search term is not numeric the experiment name is used to filter the results.

Select	Experiment Id	Experiment Name	Experiment Type	Created On

24	HI-NGS_R1	Omics	02/16/2011
475	MB1-10 (CHOP)	Omics	06/07/2016
490	Discovery and CRISPR validation of genetic factors associated with antipsychotic-induced weight gain and cardiometabolic risk	Omics	07/07/2016
501	PharmacoBOLD Resting State	fMRI	07/27/2016
506	PVPREF	Omics	08/05/2016
509	ABC-CT Resting v2	EEG	08/18/2016
13	Comparison of FI expression in Autistic and Neurotypical Homo Sapiens	Omics	12/28/2010
18	AGRE/Broad Affymetrix 5.0 Genotype Experiment	Omics	01/06/2011
22	Stitching PCR Sequencing	Omics	02/14/2011
26	ASD_Methylation	Omics	03/01/2011
29	Microarray family 03 (father, mother, sibling)	Omics	03/24/2011
37	Standard paired-end sequencing of BCRs	Omics	04/19/2011
38	Illumina Mate-Pair BCR sequencing	Omics	04/19/2011
39	Custom Jumping Libraries	Omics	04/19/2011
40	Custom CapBP	Omics	04/19/2011
41	Immunofluorescence	Omics	05/11/2011
43	Autism brain sample genotyping, Illumina	Omics	05/16/2011
47	ARRA Autism Sequencing Collaboration at Baylor. SOLiD 4 System	Omics	08/01/2011
53	AGRE Omni1-quad	Omics	10/11/2011
59	AGP genotyping	Omics	04/03/2012
60	Ultradeep 454 sequencing of synaptic genes from postmortem cerebella of individuals with ASD and neurotypical controls	Omics	06/23/2012
63	Microemulsion PCR and Targeted Resequencing for Variant Detection in ASD	Omics	07/20/2012
76	Whole Genome Sequencing in Autism Families	Omics	01/03/2013
519	Resting	fMRI	11/08/2016
90	Genotyped IAN Samples	Omics	07/09/2013
91	NJLAGS Axiom Genotyping Array	Omics	07/16/2013
93	AGP genotyping (CNV)	Omics	09/06/2013
106	Longitudinal Sleep Study. H20 200. Channel set 2	EEG	11/07/2013
107	Longitudinal Sleep Study. H20 200. Channel set 3	EEG	11/07/2013
108	Longitudinal Sleep Study. AURA 200	EEG	11/07/2013
105	Longitudinal Sleep Study. H20 200. Channel set 1	EEG	11/07/2013
109	Longitudinal Sleep Study. AURA 400	EEG	11/07/2013
116	Gene Expression Analysis WG-6	Omics	01/07/2014
131	Jeste Lab UCLA ACEii: Charlie Brown and Sesame Street - Project 1	Eye Tracking	02/27/2014
132	Jeste Lab UCLA ACEii: Animacy - Project 1	Eye Tracking	02/27/2014
133	Jeste Lab UCLA ACEii: Mom Stranger - Project 2	Eye Tracking	02/27/2014
134	Jeste Lab UCLA ACEii: Face Emotion - Project 3	Eye Tracking	02/27/2014
145	AGRE/FMR1_Illumina.JHU	Omics	04/14/2014
146	AGRE/MECP2_Sanger.JHU	Omics	04/14/2014
147	AGRE/MECP2_Junior.JHU	Omics	04/14/2014
151	Candidate Gene Identification in familial Autism	Omics	06/09/2014
152	NJLAGS Whole Genome Sequencing	Omics	07/01/2014
154	Math Autism Study - Vinod Menon	fMRI	07/15/2014
155	Resting	fMRI	07/25/2014
156	Speech	fMRI	07/25/2014
159	Emotion	fMRI	07/25/2014
160	syllable contrast	EEG	07/29/2014
167	School-age naturalistic stimuli	Eye Tracking	09/19/2014
44	AGRE/Broad Affymetrix 5.0 Genotype Experiment	Omics	06/27/2011
45	Exome Sequencing of 20 Sporadic Cases of Autism Spectrum Disorder	Omics	07/15/2011

Collection - Add Experiment

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To add an existing Data Structure, enter its title in the search bar. If you need to request changes, select the indicator "No, it requires changes to meet research needs" after selecting the Structure, and upload the file with the request changes specific to the selected Data Structure. Your file should follow the Request Changes Procedure. If the Data Structure does not exist, select "Request New Data Structure" and upload the appropriate zip file.

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Longitudinal Mapping of Network Development Underlying Executive Dysfunction in Adolescence #2912

General
Experiments (2)
Shared Data
Publications (122)
Data Expected (12)
Associated Studies (0)

Collection Title	Collection Investigators	Collection Description
Collection Title:	Longitudinal Mapping of Network Development Underlying Executive Dysfunction in Adolescence
Collection Investigators:	Theodore Satterthwaite
Collection Description:	Executive function EF undergoes dramatic development during adolescence, and is impaired across multiple psychiatric disorders such as ADHD and psychosis. Despite this fact, the neural substrates of EF development remain incompletely understood. Here, we propose to study the development of EF using cutting-edge techniques from network science. In this proposal, we will recruit 140 participants ages 10-16. This sample will include 50 with ADHD, 50 with psychosis-spectrum diagnoses, and 40 typically developing comparators. Using an accelerated longitudinal design, all participants will be followed and undergo cognitive testing, clinical assessment, and advanced multi-modal neuroimaging at 18 month intervals, yielding an average of 2.5 sessions per participant. This design will allow us to chart the development of structural and functional brain networks during adolescence, and delineate how abnormalities of brain network development are associated with deficits in EF performance, activation, and dynamics. Our overarching hypothesis is that the development of modular yet integrated brain networks during adolescence allows for specific patterns of EF activation and dynamics, and represents a fundamental mechanism for EF development. We posit that abnormalities of network development will be associated with executive dysfunction that is dimensionally present across psychiatric disorders such as ADHD and psychosis. Accordingly, in Aim 1 of this proposal, we will chart the longitudinal development of both structural and functional brain networks, and define how abnormalities of network development are associated with dimensional EF deficits in youth with ADHD and psychosis. In Aim 2, we will define how abnormal development of brain network topology is associated with alterations of executive activation and dynamics. In Aim 3, we will integrate high-dimensional imaging data using advanced multivariate analytic techniques to create a dimensional predictor of executive dysfunction. Finally, in Aim 4, we will share both raw and processed data, creating a valuable new resource for the neuroscience community. This proposal capitalizes on complementary skills of the PIs and the research team, including expertise in brain development, network science, psychopathology, cognitive science, and high dimensional imaging statistics. Through the proposed multi-level analysis, this innovative research will provide a substantial advance in our understanding of the neurodevelopmental substrates of executive dysfunction across psychiatric disorders in adolescence.
Data Repository:	NIMH Data Archive
Permission Group:
Collection Creation Date:	04/25/2018
Collection Phase:	Funding Completed
Collection Sub-Phase:	Close Out
Blinded Clinical Trial:	No
Total Funded Amount:	$1,618,893.00
Subjects Shared:	143
Collection DOI:	10.15154/s2kp-vb93

{"values":[]}

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Funding Sources:

Funding Source Name	Funding Source URL
NIH - Extramural	None

Supporting Documentation:

Grant Information:

Project Number	Title	Start Date	Original End Date	End Date	Planned Enrollment	Actual Enrollment	Organization	Funds Obligated
R01MH113550-01	Longitudinal Mapping of Network Development Underlying Executive Dysfunction in Adolescence	06/01/2018	02/28/2023	02/28/2023	140	141	UNIVERSITY OF PENNSYLVANIA	$1,618,893.00

Clinical Trials:

helpcenter.collection.general-tab

Collection - General Tab

Fields available for edit on the top portion of the page include:

Collection Title
Investigators
Collection Description
Collection Phase
Funding Source
Clinical Trials

Collection Phase: The current status of a research project submitting data to an NDA Collection, based on the timing of the award and/or the data that have been submitted.

Pre-Enrollment: The default entry made when the NDA Collection is created.
Enrolling: Data have been submitted to the NDA Collection or the NDA Data Expected initial submission date has been reached for at least one data structure category in the NDA Collection.
Data Analysis: Subject level data collection for the research project is completed and has been submitted to the NDA Collection. The NDA Collection owner or the NDA Help Desk may set this phase when they’ve confirmed data submission is complete and submitted subject counts match at least 90% of the target enrollment numbers in the NDA Data Expected. Data submission reminders will be turned off for the NDA Collection.
Funding Completed: The NIH grant award (or awards) associated with the NDA Collection has reached its end date. NDA Collections in Funding Completed phase are assigned a subphase to indicate the status of data submission.
- The Data Expected Subphase indicates that NDA expects more data will be submitted
- The Closeout Subphase indicates the data submission is complete.
- The Sharing Not Met Subphase indicates that data submission was not completed as expected.

Blinded Clinical Trial Status:

This status is set by a Collection Owner and indicates the research project is a double blinded clinical trial. When selected, the public view of Data Expected will show the Data Expected items and the Submission Dates, but the targeted enrollment and subjects submitted counts will not be displayed.
Targeted enrollment and subjects submitted counts are visible only to NDA Administrators and to the NDA Collection or as the NDA Collection Owner.
When an NDA Collection that is flagged Blinded Clinical Trial reaches the maximum data sharing date for that Data Repository (see https://nda.nih.gov/nda/sharing-regimen.html), the embargo on Data Expected information is released.

Funding Source

The organization(s) responsible for providing the funding is listed here.

Supporting Documentation

Users with Submission privileges, as well as Collection Owners, Program Officers, and those with Administrator privileges, may upload and attach supporting documentation. By default, supporting documentation is shared to the general public, however, the option is also available to limit this information to qualified researchers only.

Grant Information

Identifiable details are displayed about the Project of which the Collection was derived from. You may click in the Project Number to view a full report of the Project captured by the NIH.

Clinical Trials

Any data that is collected to support or further the research of clinical studies will be available here. Collection Owners and those with Administrator privileges may add new clinical trials.

Frequently Asked Questions

How does the NIMH Data Archive (NDA) determine which Permission Group data are submitted into?

During Collection creation, NDA staff determine the appropriate Permission Group based on the type of data to be submitted, the type of access that will be available to data access users, and the information provided by the Program Officer during grant award.
How do I know when a NDA Collection has been created?

When a Collection is created by NDA staff, an email notification will automatically be sent to the PI(s) of the grant(s) associated with the Collection to notify them.
Is a single grant number ever associated with more than one Collection?

The NDA system does not allow for a single grant to be associated with more than one Collection; therefore, a single grant will not be listed in the Grant Information section of a Collection for more than one Collection.
Why is there sometimes more than one grant included in a Collection?

In general, each Collection is associated with only one grant; however, multiple grants may be associated if the grant has multiple competing segments for the same grant number or if multiple different grants are all working on the same project and it makes sense to hold the data in one Collection (e.g., Cooperative Agreements).

Glossary

Administrator Privilege

A privilege provided to a user associated with an NDA Collection or NDA Study whereby that user can perform a full range of actions including providing privileges to other users.
Collection Owner

Generally, the Collection Owner is the contact PI listed on a grant. Only one NDA user is listed as the Collection owner. Most automated emails are primarily sent to the Collection Owner.
Collection Phase
The Collection Phase provides information on data submission as opposed to grant/project completion so while the Collection phase and grant/project phase may be closely related they are often different. Collection users with Administrative Privileges are encouraged to edit the Collection Phase. The Program Officer as listed in eRA (for NIH funded grants) may also edit this field. Changes must be saved by clicking the Save button at the bottom of the page. This field is sortable alphabetically in ascending or descending order. Collection Phase options include:
- Pre-Enrollment: A grant/project has started, but has not yet enrolled subjects.
- Enrolling: A grant/project has begun enrolling subjects. Data submission is likely ongoing at this point.
- Data Analysis: A grant/project has completed enrolling subjects and has completed all data submissions.
- Funding Completed: A grant/project has reached the project end date.
Collection Title

An editable field with the title of the Collection, which is often the title of the grant associated with the Collection.
Grant

Provides the grant number(s) for the grant(s) associated with the Collection. The field is a hyperlink so clicking on the Grant number will direct the user to the grant information in the NIH Research Portfolio Online Reporting Tools (RePORT) page.
Supporting Documentation

Various documents and materials to enable efficient use of the data by investigators unfamiliar with the project and may include the research protocol, questionnaires, and study manuals.
NIH Research Initiative

NDA Collections may be organized by scientific similarity into NIH Research Initiatives, to facilitate query tool user experience. NIH Research Initiatives map to one or multiple Funding Opportunity Announcements.
Permission Group

Access to shared record-level data in NDA is provisioned at the level of a Permission Group. NDA Permission Groups consist of one or multiple NDA Collections that contain data with the same subject consents.
Planned Enrollment

Number of human subject participants to be enrolled in an NIH-funded clinical research study. The data is provided in competing applications and annual progress reports.
Actual Enrollment

Number of human subjects enrolled in an NIH-funded clinical research study. The data is provided in annual progress reports.
NDA Collection

A virtual container and organization structure for data and associated documentation from one grant or one large project/consortium. It contains tools for tracking data submission and allows investigators to define a wide array of other elements that provide context for the data, including all general information regarding the data and source project, experimental parameters used to collect any event-based data contained in the Collection, methods, and other supporting documentation. They also allow investigators to link underlying data to an NDA Study, defining populations and subpopulations specific to research aims.
Data Use Limitations

Data Use Limitations (DULs) describe the appropriate secondary use of a dataset and are based on the original informed consent of a research participant. NDA only accepts consent-based data use limitations defined by the NIH Office of Science Policy.
Total Subjects Shared

The total number of unique subjects for whom data have been shared and are available for users with permission to access data.

Contact NDA Help Desk

ID	Name	Created Date	Status	Type
1455	Resting-state fMRI	12/30/2019	Approved	fMRI
2621	Task fMRI	05/29/2024	Approved	fMRI

helpcenter.collection.experiments-tab

Collection - Experiments

The number of Experiments included is displayed in parentheses next to the tab name. You may download all experiments associated with the Collection via the Download button. You may view individual experiments by clicking the Experiment Name and add them to the Filter Cart via the Add to Cart button.

Collection Owners, Program Officers, and users with Submission or Administrative Privileges for the Collection may create or edit an Experiment.

Please note: The creation of an NDA Experiment does not necessarily mean that data collected, according to the defined Experiment, has been submitted or shared.

Frequently Asked Questions

Can an Experiment be associated with more than one Collection?
Yes -see the “Copy” button in the bottom left when viewing an experiment. There are two actions that can be performed via this button:
1. Copy the experiment with intent for modifications.
2. Associate the experiment to the collection. No modifications can be made to the experiment.

Glossary

Experiment Status

An Experiment must be Approved before data using the associated Experiment_ID may be uploaded.
Experiment ID

The ID number automatically generated by NDA which must be included in the appropriate file when uploading data to link the Experiment Definition to the subject record.

Contact NDA Help Desk

Shared Data:

Title	Type	Number of Subjects
Affective Reactivity Index	Clinical Assessments	134
Behavioral Inhibition Scale/Behavioral Activation Scale	Clinical Assessments	130
Image	Imaging	126
PRIME Screen	Clinical Assessments	135
PROMIS Emotional Distress-Anxiety	Clinical Assessments	115
Positive and Negative Affect Schedule (PANAS) Child Version	Clinical Assessments	100
Pubertal Development Scale	Clinical Assessments	106
Questionnaire for Substance Use	Clinical Assessments	92
Research Subject	Clinical Assessments	142
State-Trait Anxiety Inventory for Adults	Clinical Assessments	134
Strengths and Weakness of ADHD Symptoms and Normal Behavior	Clinical Assessments	134

helpcenter.collection.shared-data-tab

Collection - Shared Data

This tab provides a quick overview of the Data Structure title, Data Type, and Number of Subjects that are currently Shared for the Collection. The information presented in this tab is automatically generated by NDA and cannot be edited. If no information is visible on this tab, this would indicate the Collection does not have shared data or the data is private.

The shared data is available to other researchers who have permission to access data in the Collection's designated Permission Group(s). Use the Download button to get all shared data from the Collection to the Filter Cart.

Frequently Asked Questions

How will I know if another researcher uses data that I shared through the NIMH Data Archive (NDA)?

To see what data your project have submitted are being used by a study, simply go the Associated Studies tab of your collection. Alternatively, you may review an NDA Study Attribution Report available on the General tab.
Can I get a supplement to share data from a completed research project?

Often it becomes more difficult to organize and format data electronically after the project has been completed and the information needed to create a GUID may not be available; however, you may still contact a program staff member at the appropriate funding institution for more information.
Can I get a supplement to share data from a research project that is still ongoing?

Unlike completed projects where researchers may not have the information needed to create a GUID and/or where the effort needed to organize and format data becomes prohibitive, ongoing projects have more of an opportunity to overcome these challenges. Please contact a program staff member at the appropriate funding institution for more information.

Glossary

Data Structure

A defined organization and group of Data Elements to represent an electronic definition of a measure, assessment, questionnaire, or collection of data points. Data structures that have been defined in the NDA Data Dictionary are available at https://nda.nih.gov/general-query.html?q=query=data-structure
Data Type

A grouping of data by similar characteristics such as Clinical Assessments, Omics, or Neurosignal data.
Shared

The term 'Shared' generally means available to others; however, there are some slightly different meanings based on what is Shared. A Shared NDA Study is viewable and searchable publicly regardless of the user's role or whether the user has an NDA account. A Shared NDA Study does not necessarily mean that data used in the NDA Study have been shared as this is independently determined. Data are shared according the schedule defined in a Collection's Data Expected Tab and/or in accordance with data sharing expectations in the NDA Data Sharing Terms and Conditions. Additionally, Supporting Documentation uploaded to a Collection may be shared independent of whether data are shared.

Contact NDA Help Desk

Collection Owners and those with Collection Administrator permission, may edit a collection. The following is currently available for Edit on this page:

Publications

Publications relevant to NDA data are listed below. Most displayed publications have been associated with the grant within Pubmed. Use the "+ New Publication" button to add new publications. Publications relevant/not relevant to data expected are categorized. Relevant publications are then linked to the underlying data by selecting the Create Study link. Study provides the ability to define cohorts, assign subjects, define outcome measures and lists the study type, data analysis and results. Analyzed data and results are expected in this way.

PubMed ID	Study	Title	Journal	Authors	Date	Status
40835723	Create Study	Changes in brain connectivity and neurovascular dynamics during dexmedetomidine-induced loss of consciousness.	Communications biology	Fotiadis, Panagiotis; McKinstry-Wu, Andrew R; Weinstein, Sarah M; Cook, Philip A; Elliott, Mark; Cieslak, Matthew; Duda, Jeffrey T; Satterthwaite, Theodore D; Shinohara, Russell T; Proekt, Alexander; Kelz, Max B; Detre, John A; Bassett, Dani S	August 20, 2025	Not Determined
40811747	Create Study	A software ecosystem for brain tractometry processing, analysis, and insight.	PLoS computational biology	Kruper, John; Richie-Halford, Adam; Qiao, Joanna; Gilmore, Asa; Chang, Kelly; Grotheer, Mareike; Roy, Ethan; Caffarra, Sendy; Gomez, Teresa; Chou, Sam; Cieslak, Matthew; Koudoro, Serge; Garyfallidis, Eleftherios; Satterthwaite, Theodore D; Yeatman, Jason D; Rokem, Ariel	August 1, 2025	Not Determined
40777274	Create Study	Charting structural brain asymmetry across the human lifespan.	bioRxiv : the preprint server for biology	Dorfschmidt, Lena; White, Simon; Gardner, Margaret; Bedford, Saashi; Ball, Gareth; Edwards, A David; Gu, Yuanjun; He, Yuankai; Huang, Hao; Karandikar, Shivaram; Kyriakopoulou, Vanessa; Ouyuang, Minhui; Pulli, Elmo P; Raznahan, Armin; Robinson, Emma C; Romero-García, Rafael; Satterthwaite, Theodore D; Schabdach, Jenna; Sebenius, Isaac; Sha, Zhiqiang; Shinohara, Russell T; Tuulari, Jetro; Vaghi, Matilde M; Vogel, Jacob; Váša, František; Williams, Logan; Zimmerman, Dabriel; Lifespan Brain Chart Consortium; Warrier, Varun; Wagstyl, Konrad; Bullmore, Edward T; Bethlehem, Richard A I; Seidlitz, Jakob; Alexander-Bloch, Aaron	July 24, 2025	Not Determined
40615590	Create Study	Human thalamocortical structural connectivity develops in line with a hierarchical axis of cortical plasticity.	Nature neuroscience	Sydnor, Valerie J; Bagautdinova, Joëlle; Larsen, Bart; Arcaro, Michael J; Barch, Deanna M; Bassett, Dani S; Alexander-Bloch, Aaron F; Cook, Philip A; Covitz, Sydney; Franco, Alexandre R; Gur, Raquel E; Gur, Ruben C; Mackey, Allyson P; Mehta, Kahini; Meisler, Steven L; Milham, Michael P; Moore, Tyler M; Müller, Eli J; Roalf, David R; Salo, Taylor; Schubiner, Gabriel; Seidlitz, Jakob; Shinohara, Russell T; Shine, James M; Yeh, Fang-Cheng; Cieslak, Matthew; Satterthwaite, Theodore D	August 1, 2025	Not Determined
40536230	Create Study	Reproducible sex differences in personalised functional network topography in youth.	The British journal of psychiatry : the journal of mental science	Keller, Arielle S; Sun, Kevin Y; Francisco, Ashley; Robinson, Heather; Beydler, Emily; Bassett, Dani S; Cieslak, Matthew; Cui, Zaixu; Davatzikos, Christos; Fan, Yong; Gardner, Margaret; Kishton, Rachel; Kornfield, Sara L; Larsen, Bart; Li, Hongming; Linder, Isabella; Pines, Adam; Pritschet, Laura; Raznahan, Armin; Roalf, David R; Seidlitz, Jakob; Shafiei, Golia; Shinohara, Russell T; White, Lauren K; Wolf, Daniel H; Alexander-Bloch, Aaron; Satterthwaite, Theodore D; Shanmugan, Sheila	June 1, 2025	Not Determined
40463267	Create Study	An open, fully-processed data resource for studying mood and sleep variability in the developing brain.	bioRxiv : the preprint server for biology	Brook, Juliette B H; Salo, Taylor; Luo, Audrey C; Bagautdinova, Joëlle; Rush, Sage; Alexander-Bloch, Aaron F; Baller, Erica B; Calkins, Monica E; Cieslak, Matt; Cooper, Elena C; Detre, John A; Elliot, Mark A; Fair, Damien A; Freedman, Phoebe; Gehrman, Philip R; Gur, Ruben C; Gur, Raquel E; Klein, Arno; Laney, Nina; Laumann, Timothy O; Mehta, Kahini; Merikangas, Kathleen; Milham, Michael P; Mitchell, Jonathan A; Moore, Tyler M; Nelson, Steven M; Ruparel, Kosha; Sevchik, Brooke L; Shanmugan, Sheila; Shou, Haochang; Taso, Manuel; White, Lauren K; Wolf, Daniel H; Tisdall, M Dylan; Roalf, David R; Satterthwaite, Theodore D	May 14, 2025	Not Determined
40462975	Create Study	fMRIPrep Lifespan: Extending A Robust Pipeline for Functional MRI Preprocessing to Developmental Neuroimaging.	bioRxiv : the preprint server for biology	Goncalves, Mathias; Moser, Julia; Madison, Thomas J; McCollum, Rae; Lundquist, Jacob T; Fayzullobekova, Begim; Hadera, Lidia; Pham, Han H N; Moore, Lucille A; Houghton, Audrey; Conan, Greg; Styner, Martin A; Alexopoulos, Dimitrios; Smyser, Christopher D; Stoyell, Sally M; Koirala, Sanju; Nelson, Steven M; Weldon, Kimberly B; Lee, Erik; Hermosillo, Robert J M; Vizioli, Luca; Yacoub, Essa; Patel, Gaurav H; Sanchez, Juan; Wengler, Kenneth; Salo, Taylor; Satterthwaite, Theodore D; Elison, Jed T; Markiewicz, Christopher J; Poldrack, Russell A; Feczko, Eric; Esteban, Oscar; Fair, Damien A	May 18, 2025	Not Determined
40291740	Create Study	Optimizing Biophysical Large-Scale Brain Circuit Models With Deep Neural Networks.	bioRxiv : the preprint server for biology	Zeng, Tianchu; Tian, Fang; Zhang, Shaoshi; Li, Xin; Tan, Ai Peng; Larsen, Bart; Gur, Ruben C; Gur, Raquel E; Moore, Tyler M; Satterthwaite, Theodore D; Deco, Gustavo; Holmes, Avram J; Yeo, B T Thomas	April 7, 2025	Not Determined
40227683	Create Study	Uncinate Fasciculus Lesion Burden and Anxiety in Multiple Sclerosis.	JAMA network open	Baller, Erica B; Luo, Audrey C; Schindler, Matthew K; Cooper, Elena C; Pecsok, Margaret K; Cieslak, Matthew C; Martin, Melissa Lynne; Bar-Or, Amit; Elahi, Ameena; Perrone, Christopher M; Spangler, Bailey C; Satterthwaite, Theodore D; Shinohara, Russell T	April 1, 2025	Not Determined
40166142	Create Study	Two Axes of White Matter Development.	bioRxiv : the preprint server for biology	Luo, Audrey C; Meisler, Steven L; Sydnor, Valerie J; Alexander-Bloch, Aaron; Bagautdinova, Joëlle; Barch, Deanna M; Bassett, Dani S; Davatzikos, Christos; Franco, Alexandre R; Goldsmith, Jeff; Gur, Raquel E; Gur, Ruben C; Hu, Fengling; Jaskir, Marc; Kiar, Gregory; Keller, Arielle S; Larsen, Bart; Mackey, Allyson P; Milham, Michael P; Roalf, David R; Shafiei, Golia; Shinohara, Russell T; Somerville, Leah H; Weinstein, Sarah M; Yeatman, Jason D; Cieslak, Matthew; Rokem, Ariel; Satterthwaite, Theodore D	May 20, 2025	Not Determined
40060681	Create Study	Reproducible Brain Charts: An open data resource for mapping brain development and its associations with mental health.	bioRxiv : the preprint server for biology	Shafiei, G; Esper, N B; Hoffmann, M S; Ai, L; Chen, A A; Cluce, J; Covitz, S; Giavasis, S; Lane, C; Mehta, K; Moore, T M; Salo, T; Tapera, T M; Calkins, M E; Colcombe, S; Davatzikos, C; Gur, R E; Gur, R C; Pan, P M; Jackowski, A P; Rokem, A; Rohde, L A; Shinohara, R T; Tottenham, N; Zuo, X N; Cieslak, M; Franco, A R; Kiar, G; Salum, G A; Milham, M P; Satterthwaite, T D	February 26, 2025	Not Determined
39975397	Create Study	Developmental Variations in Recurrent Spatiotemporal Brain Propagations from Childhood to Adulthood.	bioRxiv : the preprint server for biology	Byeon, Kyoungseob; Park, Hyunjin; Park, Shinwon; Cluce, Jon; Mehta, Kahini; Cieslak, Matthew; Cui, Zaixu; Hong, Seok-Jun; Chang, Catie; Smallwood, Jonathan; Satterthwaite, Theodore D; Milham, Michael P; Xu, Ting	February 5, 2025	Not Determined
39604734	Create Study	Study design features increase replicability in brain-wide association studies.	Nature	Kang, Kaidi; Seidlitz, Jakob; Bethlehem, Richard A I; Xiong, Jiangmei; Jones, Megan T; Mehta, Kahini; Keller, Arielle S; Tao, Ran; Randolph, Anita; Larsen, Bart; Tervo-Clemmens, Brenden; Feczko, Eric; Dominguez, Oscar Miranda; Nelson, Steven M; Lifespan Brain Chart Consortium; Schildcrout, Jonathan; Fair, Damien A; Satterthwaite, Theodore D; Alexander-Bloch, Aaron; Vandekar, Simon	December 1, 2024	Not Determined
39417125	Create Study	Association of Anxiety with Uncinate Fasciculus Lesion Burden in Multiple Sclerosis.	medRxiv : the preprint server for health sciences	Baller, Erica B; Luo, Audrey C; Schindler, Matthew K; Cooper, Elena C; Pecsok, Margaret K; Cieslak, Matthew C; Martin, Melissa Lynne; Bar-Or, Amit; Elahi, Ameena; Perrone, Christopher M; Reid, Donovan; Spangler, Bailey C; Satterthwaite, Theodore D; Shinohara, Russell T	October 9, 2024	Not Determined
39416182	Create Study	Changes in brain connectivity and neurovascular dynamics during dexmedetomidine-induced loss of consciousness.	bioRxiv : the preprint server for biology	Fotiadis, Panagiotis; McKinstry-Wu, Andrew R; Weinstein, Sarah M; Cook, Philip A; Elliott, Mark; Cieslak, Matthew; Duda, Jeffrey T; Satterthwaite, Theodore D; Shinohara, Russell T; Proekt, Alexander; Kelz, Max B; Detre, John A; Bassett, Dani S	November 12, 2024	Not Determined
39399003	Create Study	Polygenic Risk, Psychopathology, and Personalized Functional Brain Network Topography in Adolescence.	medRxiv : the preprint server for health sciences	Sun, Kevin Y; Schmitt, J Eric; Moore, Tyler M; Barzilay, Ran; Almasy, Laura; Schultz, Laura M; Mackey, Allyson P; Kafadar, Eren; Sha, Zhiqiang; Seidlitz, Jakob; Mallard, Travis T; Cui, Zaixu; Li, Hongming; Fan, Yong; Fair, Damien A; Satterthwaite, Theodore D; Keller, Arielle S; Alexander-Bloch, Aaron	May 27, 2025	Not Determined
39386637	Create Study	Reproducible Sex Differences in Personalized Functional Network Topography in Youth.	bioRxiv : the preprint server for biology	Keller, Arielle S; Sun, Kevin Y; Francisco, Ashley; Robinson, Heather; Beydler, Emily; Bassett, Dani S; Cieslak, Matthew; Cui, Zaixu; Davatzikos, Christos; Fan, Yong; Gardner, Margaret; Kishton, Rachel; Kornfield, Sara L; Larsen, Bart; Li, Hongming; Linder, Isabella; Pines, Adam; Pritschet, Laura; Raznahan, Armin; Roalf, David R; Seidlitz, Jakob; Shafiei, Golia; Shinohara, Russell T; Wolf, Daniel H; Alexander-Bloch, Aaron; Satterthwaite, Theodore D; Shanmugan, Sheila	September 29, 2024	Not Determined
39140988	Create Study	Regression and alignment for functional data and network topology.	Biostatistics (Oxford, England)	Tu, Danni; Wrobel, Julia; Satterthwaite, Theodore D; Goldsmith, Jeff; Gur, Ruben C; Gur, Raquel E; Gertheiss, Jan; Bassett, Dani S; Shinohara, Russell T	December 31, 2024	Not Determined
39075309	Create Study	A network control theory pipeline for studying the dynamics of the structural connectome.	Nature protocols	Parkes, Linden; Kim, Jason Z; Stiso, Jennifer; Brynildsen, Julia K; Cieslak, Matthew; Covitz, Sydney; Gur, Raquel E; Gur, Ruben C; Pasqualetti, Fabio; Shinohara, Russell T; Zhou, Dale; Satterthwaite, Theodore D; Bassett, Dani S	December 1, 2024	Not Determined
38979274	Create Study	Mapping Individual Differences in Intermodal Coupling in Neurodevelopment.	bioRxiv : the preprint server for biology	Weinstein, Sarah M; Tu, Danni; Hu, Fengling; Pan, Ruyi; Zhang, Rongqian; Vandekar, Simon N; Baller, Erica B; Gur, Ruben C; Gur, Raquel E; Alexander-Bloch, Aaron F; Satterthwaite, Theodore D; Park, Jun Young	June 28, 2024	Not Determined
38915591	Create Study	A sensorimotor-association axis of thalamocortical connection development.	bioRxiv : the preprint server for biology	Sydnor, Valerie J; Bagautdinova, Joëlle; Larsen, Bart; Arcaro, Michael J; Barch, Deanna M; Bassett, Dani S; Alexander-Bloch, Aaron F; Cook, Philip A; Covitz, Sydney; Franco, Alexandre R; Gur, Raquel E; Gur, Ruben C; Mackey, Allyson P; Mehta, Kahini; Meisler, Steven L; Milham, Michael P; Moore, Tyler M; Müller, Eli J; Roalf, David R; Salo, Taylor; Schubiner, Gabriel; Seidlitz, Jakob; Shinohara, Russell T; Shine, James M; Yeh, Fang-Cheng; Cieslak, Matthew; Satterthwaite, Theodore D	June 14, 2024	Not Determined
38878300	Create Study	Network enrichment significance testing in brain-phenotype association studies.	Human brain mapping	Weinstein, Sarah M; Vandekar, Simon N; Li, Bin; Alexander-Bloch, Aaron F; Raznahan, Armin; Li, Mingyao; Gur, Raquel E; Gur, Ruben C; Roalf, David R; Park, Min Tae M; Chakravarty, Mallar; Baller, Erica B; Linn, Kristin A; Satterthwaite, Theodore D; Shinohara, Russell T	June 1, 2024	Not Determined
38814872	Create Study	In vivo whole-cortex marker of excitation-inhibition ratio indexes cortical maturation and cognitive ability in youth.	Proceedings of the National Academy of Sciences of the United States of America	Zhang, Shaoshi; Larsen, Bart; Sydnor, Valerie J; Zeng, Tianchu; An, Lijun; Yan, Xiaoxuan; Kong, Ru; Kong, Xiaolu; Gur, Ruben C; Gur, Raquel E; Moore, Tyler M; Wolf, Daniel H; Holmes, Avram J; Xie, Yapei; Zhou, Juan Helen; Fortier, Marielle V; Tan, Ai Peng; Gluckman, Peter; Chong, Yap Seng; Meaney, Michael J; Deco, Gustavo; Satterthwaite, Theodore D; Yeo, B T Thomas	June 4, 2024	Not Determined
38664387	Create Study	Functional connectivity development along the sensorimotor-association axis enhances the cortical hierarchy.	Nature communications	Luo, Audrey C; Sydnor, Valerie J; Pines, Adam; Larsen, Bart; Alexander-Bloch, Aaron F; Cieslak, Matthew; Covitz, Sydney; Chen, Andrew A; Esper, Nathalia Bianchini; Feczko, Eric; Franco, Alexandre R; Gur, Raquel E; Gur, Ruben C; Houghton, Audrey; Hu, Fengling; Keller, Arielle S; Kiar, Gregory; Mehta, Kahini; Salum, Giovanni A; Tapera, Tinashe; Xu, Ting; Zhao, Chenying; Salo, Taylor; Fair, Damien A; Shinohara, Russell T; Milham, Michael P; Satterthwaite, Theodore D	April 25, 2024	Not Determined
38586012	Create Study	In-vivo whole-cortex marker of excitation-inhibition ratio indexes cortical maturation and cognitive ability in youth.	bioRxiv : the preprint server for biology	Zhang, Shaoshi; Larsen, Bart; Sydnor, Valerie J; Zeng, Tianchu; An, Lijun; Yan, Xiaoxuan; Kong, Ru; Kong, Xiaolu; Gur, Ruben C; Gur, Raquel E; Moore, Tyler M; Wolf, Daniel H; Holmes, Avram J; Xie, Yapei; Zhou, Juan Helen; Fortier, Marielle V; Tan, Ai Peng; Gluckman, Peter; Chong, Yap Seng; Meaney, Michael J; Deco, Gustavo; Satterthwaite, Theodore D; Yeo, B T Thomas	March 28, 2024	Not Determined
38583301	Create Study	A general exposome factor explains individual differences in functional brain network topography and cognition in youth.	Developmental cognitive neuroscience	Keller, Arielle S; Moore, Tyler M; Luo, Audrey; Visoki, Elina; Gataviņš, Mārtiņš M; Shetty, Alisha; Cui, Zaixu; Fan, Yong; Feczko, Eric; Houghton, Audrey; Li, Hongming; Mackey, Allyson P; Miranda-Dominguez, Oscar; Pines, Adam; Shinohara, Russell T; Sun, Kevin Y; Fair, Damien A; Satterthwaite, Theodore D; Barzilay, Ran	April 1, 2024	Not Determined
38520359	Create Study	A practical evaluation of measures derived from compressed sensing diffusion spectrum imaging.	Human brain mapping	Radhakrishnan, Hamsanandini; Zhao, Chenying; Sydnor, Valerie J; Baller, Erica B; Cook, Philip A; Fair, Damien A; Giesbrecht, Barry; Larsen, Bart; Murtha, Kristin; Roalf, David R; Rush-Goebel, Sage; Shinohara, Russell T; Shou, Haochang; Tisdall, M Dylan; Vettel, Jean M; Grafton, Scott T; Cieslak, Matthew; Satterthwaite, Theodore D	April 1, 2024	Not Determined
38460580	Create Study	Generalizable Links Between Borderline Personality Traits and Functional Connectivity.	Biological psychiatry	Shafiei, Golia; Keller, Arielle S; Bertolero, Maxwell; Shanmugan, Sheila; Bassett, Dani S; Chen, Andrew A; Covitz, Sydney; Houghton, Audrey; Luo, Audrey; Mehta, Kahini; Salo, Taylor; Shinohara, Russell T; Fair, Damien; Hallquist, Michael N; Satterthwaite, Theodore D	September 15, 2024	Not Determined
38339908	Create Study	Diffusion MRI head motion correction methods are highly accurate but impacted by denoising and sampling scheme.	Human brain mapping	Cieslak, Matthew; Cook, Philip A; Shafiei, Golia; Tapera, Tinashe M; Radhakrishnan, Hamsanandini; Elliott, Mark; Roalf, David R; Oathes, Desmond J; Bassett, Dani S; Tisdall, M Dylan; Rokem, Ariel; Grafton, Scott T; Satterthwaite, Theodore D	February 1, 2024	Not Determined
38110396	Create Study	Personalized functional brain network topography is associated with individual differences in youth cognition.	Nature communications	Keller, Arielle S; Pines, Adam R; Shanmugan, Sheila; Sydnor, Valerie J; Cui, Zaixu; Bertolero, Maxwell A; Barzilay, Ran; Alexander-Bloch, Aaron F; Byington, Nora; Chen, Andrew; Conan, Gregory M; Davatzikos, Christos; Feczko, Eric; Hendrickson, Timothy J; Houghton, Audrey; Larsen, Bart; Li, Hongming; Miranda-Dominguez, Oscar; Roalf, David R; Perrone, Anders; Shetty, Alisha; Shinohara, Russell T; Fan, Yong; Fair, Damien A; Satterthwaite, Theodore D	December 18, 2023	Not Determined
38045258	Create Study	XCP-D: A Robust Pipeline for the post-processing of fMRI data.	bioRxiv : the preprint server for biology	Mehta, Kahini; Salo, Taylor; Madison, Thomas; Adebimpe, Azeez; Bassett, Danielle S; Bertolero, Max; Cieslak, Matthew; Covitz, Sydney; Houghton, Audrey; Keller, Arielle S; Luo, Audrey; Miranda-Dominguez, Oscar; Nelson, Steve M; Shafiei, Golia; Shanmugan, Sheila; Shinohara, Russell T; Sydnor, Valerie J; Feczko, Eric; Fair, Damien A; Satterthwaite, Theodore D	November 21, 2023	Not Determined
38014137	Create Study	Network Enrichment Significance Testing in Brain-Phenotype Association Studies.	bioRxiv : the preprint server for biology	Weinstein, Sarah M; Vandekar, Simon N; Alexander-Bloch, Aaron F; Raznahan, Armin; Li, Mingyao; Gur, Raquel E; Gur, Ruben C; Roalf, David R; Park, Min Tae M; Chakravarty, Mallar; Baller, Erica B; Linn, Kristin A; Satterthwaite, Theodore D; Shinohara, Russell T	November 13, 2023	Not Determined
37995188	Create Study	Development of white matter fiber covariance networks supports executive function in youth.	Cell reports	Bagautdinova, Joëlle; Bourque, Josiane; Sydnor, Valerie J; Cieslak, Matthew; Alexander-Bloch, Aaron F; Bertolero, Maxwell A; Cook, Philip A; Gur, Raquel E; Gur, Ruben C; Hu, Fengling; Larsen, Bart; Moore, Tyler M; Radhakrishnan, Hamsanandini; Roalf, David R; Shinohara, Russel T; Tapera, Tinashe M; Zhao, Chenying; Sotiras, Aristeidis; Davatzikos, Christos; Satterthwaite, Theodore D	December 26, 2023	Not Determined
37981178	Create Study	Mapping the Relationship of White Matter Lesions to Depression in Multiple Sclerosis.	Biological psychiatry	Baller, Erica B; Sweeney, Elizabeth M; Cieslak, Matthew; Robert-Fitzgerald, Timothy; Covitz, Sydney C; Martin, Melissa L; Schindler, Matthew K; Bar-Or, Amit; Elahi, Ameena; Larsen, Bart S; Manning, Abigail R; Markowitz, Clyde E; Perrone, Christopher M; Rautman, Victoria; Seitz, Madeleine M; Detre, John A; Fox, Michael D; Shinohara, Russell T; Satterthwaite, Theodore D	June 15, 2024	Not Determined
37963017	Create Study	The molecular genetic landscape of human brain size variation.	Cell reports	Seidlitz, Jakob; Mallard, Travis T; Vogel, Jacob W; Lee, Younga H; Warrier, Varun; Ball, Gareth; Hansson, Oskar; Hernandez, Leanna M; Mandal, Ayan S; Wagstyl, Konrad; Lombardo, Michael V; Courchesne, Eric; Glessner, Joseph T; Satterthwaite, Theodore D; Bethlehem, Richard A I; Bernstock, Joshua D; Lifespan Brain Chart Consortium; Tasaki, Shinya; Ng, Bernard; Gaiteri, Chris; Smoller, Jordan W; Ge, Tian; Gur, Raquel E; Gandal, Michael J; Alexander-Bloch, Aaron F	November 28, 2023	Not Determined
37777569	Create Study	Myelination and excitation-inhibition balance synergistically shape structure-function coupling across the human cortex.	Nature communications	Fotiadis, Panagiotis; Cieslak, Matthew; He, Xiaosong; Caciagli, Lorenzo; Ouellet, Mathieu; Satterthwaite, Theodore D; Shinohara, Russell T; Bassett, Dani S	September 30, 2023	Not Determined
37696094	Create Study	Evaluation of a new intrinsic and extrinsic motivation scale in youth with psychosis spectrum symptoms.	Comprehensive psychiatry	Didier, Paige R; Moore, Tyler M; Calkins, Monica E; Prettyman, Greer; Levinson, Tess; Savage, Chloe; de Moraes Leme, Luis Fernando Viegas; Kohler, Christian G; Kable, Joseph; Satterthwaite, Theodore; Gur, Ruben C; Gur, Raquel E; Wolf, Daniel H	November 1, 2023	Not Determined
37662395	Create Study	Using network control theory to study the dynamics of the structural connectome.	bioRxiv : the preprint server for biology	Parkes, Linden; Kim, Jason Z; Stiso, Jennifer; Brynildsen, Julia K; Cieslak, Matthew; Covitz, Sydney; Gur, Raquel E; Gur, Ruben C; Pasqualetti, Fabio; Shinohara, Russell T; Zhou, Dale; Satterthwaite, Theodore D; Bassett, Dani S	August 24, 2023	Not Determined
37662311	Create Study	Generalizable links between symptoms of borderline personality disorder and functional connectivity.	bioRxiv : the preprint server for biology	Shafiei, Golia; Keller, Arielle S; Bertolero, Maxwell; Shanmugan, Sheila; Bassett, Dani S; Chen, Andrew A; Covitz, Sydney; Houghton, Audrey; Luo, Audrey; Mehta, Kahini; Salo, Taylor; Shinohara, Russell T; Fair, Damien; Hallquist, Michael N; Satterthwaite, Theodore D	August 21, 2023	Not Determined
37645999	Create Study	A reproducible and generalizable software workflow for analysis of large-scale neuroimaging data collections using BIDS Apps.	bioRxiv : the preprint server for biology	Zhao, Chenying; Jarecka, Dorota; Covitz, Sydney; Chen, Yibei; Eickhoff, Simon B; Fair, Damien A; Franco, Alexandre R; Halchenko, Yaroslav O; Hendrickson, Timothy J; Hoffstaedter, Felix; Houghton, Audrey; Kiar, Gregory; Macdonald, Austin; Mehta, Kahini; Milham, Michael P; Salo, Taylor; Hanke, Michael; Ghosh, Satrajit S; Cieslak, Matthew; Satterthwaite, Theodore D	August 18, 2023	Not Determined
37643932	Create Study	A critical period plasticity framework for the sensorimotor-association axis of cortical neurodevelopment.	Trends in neurosciences	Larsen, Bart; Sydnor, Valerie J; Keller, Arielle S; Yeo, B T Thomas; Satterthwaite, Theodore D	October 1, 2023	Not Determined
37503017	Create Study	Regression and Alignment for Functional Data and Network Topology.	bioRxiv : the preprint server for biology	Tu, Danni; Wrobel, Julia; Satterthwaite, Theodore D; Goldsmith, Jeff; Gur, Ruben C; Gur, Raquel E; Gertheiss, Jan; Bassett, Dani S; Shinohara, Russell T	February 18, 2024	Not Determined
37398183	Create Study	Mapping the relationship of white matter lesions to depression in multiple sclerosis.	medRxiv : the preprint server for health sciences	Baller, Erica B; Sweeney, Elizabeth M; Cieslak, Matthew C; Robert-Fitzgerald, Timothy; Covitz, Sydney C; Martin, Melissa L; Schindler, Matthew K; Bar-Or, Amit; Elahi, Ameena; Larsen, Bart S; Manning, Abigail R; Markowitz, Clyde E; Perrone, Christopher M; Rautman, Victoria; Seitz, Madeleine M; Detre, John A; Fox, Michael D; Shinohara, Russell T; Satterthwaite, Theodore D	June 12, 2023	Not Determined
37353585	Create Study	Alprazolam modulates persistence energy during emotion processing in first-degree relatives of individuals with schizophrenia: a network control study.	Molecular psychiatry	Mahadevan, Arun S; Cornblath, Eli J; Lydon-Staley, David M; Zhou, Dale; Parkes, Linden; Larsen, Bart; Adebimpe, Azeez; Kahn, Ari E; Gur, Ruben C; Gur, Raquel E; Satterthwaite, Theodore D; Wolf, Daniel H; Bassett, Dani S	August 1, 2023	Not Determined
37327696	Create Study	Individual differences in delay discounting are associated with dorsal prefrontal cortex connectivity in children, adolescents, and adults.	Developmental cognitive neuroscience	Mehta, Kahini; Pines, Adam; Adebimpe, Azeez; Larsen, Bart; Bassett, Danielle S; Calkins, Monica E; Baller, Erica B; Gell, Martin; Patrick, Lauren M; Shafiei, Golia; Gur, Raquel E; Gur, Ruben C; Roalf, David R; Romer, Daniel; Wolf, Daniel H; Kable, Joseph W; Satterthwaite, Theodore D	August 1, 2023	Not Determined
37146760	Create Study	Development of Iron Status Measures during Youth: Associations with Sex, Neighborhood Socioeconomic Status, Cognitive Performance, and Brain Structure.	The American journal of clinical nutrition	Larsen, Bart; Baller, Erica B; Boucher, Alexander A; Calkins, Monica E; Laney, Nina; Moore, Tyler M; Roalf, David R; Ruparel, Kosha; Gur, Ruben C; Gur, Raquel E; Georgieff, Michael K; Satterthwaite, Theodore D	July 1, 2023	Not Determined
37084926	Create Study	Image harmonization: A review of statistical and deep learning methods for removing batch effects and evaluation metrics for effective harmonization.	NeuroImage	Hu, Fengling; Chen, Andrew A; Horng, Hannah; Bashyam, Vishnu; Davatzikos, Christos; Alexander-Bloch, Aaron; Li, Mingyao; Shou, Haochang; Satterthwaite, Theodore D; Yu, Meichen; Shinohara, Russell T	July 1, 2023	Not Determined
37019760	Create Study	Activation of Internal Correctness Monitoring Circuitry in Youths With Psychosis Spectrum Symptoms.	Biological psychiatry. Cognitive neuroscience and neuroimaging	Levinson, Tess; Prettyman, Greer; Savage, Chloe; White, Lauren; Moore, Tyler M; Calkins, Monica E; Ruparel, Kosha; Gur, Raquel E; Gur, Ruben C; Satterthwaite, Theodore D; Wolf, Daniel H	May 1, 2023	Not Determined
37017074	Create Study	Combining mixed effects hidden Markov models with latent alternating recurrent event processes to model diurnal active-rest cycles.	Biometrics	Ren, Benny; Barnett, Ian	December 1, 2023	Not Determined
36973514	Create Study	Intrinsic activity development unfolds along a sensorimotor-association cortical axis in youth.	Nature neuroscience	Sydnor, Valerie J; Larsen, Bart; Seidlitz, Jakob; Adebimpe, Azeez; Alexander-Bloch, Aaron F; Bassett, Dani S; Bertolero, Maxwell A; Cieslak, Matthew; Covitz, Sydney; Fan, Yong; Gur, Raquel E; Gur, Ruben C; Mackey, Allyson P; Moore, Tyler M; Roalf, David R; Shinohara, Russell T; Satterthwaite, Theodore D	April 1, 2023	Not Determined
36931330	Create Study	ModelArray: An R package for statistical analysis of fixel-wise data.	NeuroImage	Zhao, Chenying; Tapera, Tinashe M; Bagautdinova, Joëlle; Bourque, Josiane; Covitz, Sydney; Gur, Raquel E; Gur, Ruben C; Larsen, Bart; Mehta, Kahini; Meisler, Steven L; Murtha, Kristin; Muschelli, John; Roalf, David R; Sydnor, Valerie J; Valcarcel, Alessandra M; Shinohara, Russell T; Cieslak, Matthew; Satterthwaite, Theodore D	May 1, 2023	Not Determined
36803653	Create Study	Development of top-down cortical propagations in youth.	Neuron	Pines, Adam; Keller, Arielle S; Larsen, Bart; Bertolero, Maxwell; Ashourvan, Arian; Bassett, Dani S; Cieslak, Matthew; Covitz, Sydney; Fan, Yong; Feczko, Eric; Houghton, Audrey; Rueter, Amanda R; Saggar, Manish; Shafiei, Golia; Tapera, Tinashe M; Vogel, Jacob; Weinstein, Sarah M; Shinohara, Russell T; Williams, Leanne M; Fair, Damien A; Satterthwaite, Theodore D	April 19, 2023	Not Determined
36798354	Create Study	Development of White Matter Fiber Covariance Networks Supports Executive Function in Youth.	bioRxiv : the preprint server for biology	Bagautdinova, Joëlle; Bourque, Josiane; Sydnor, Valerie J; Cieslak, Matt; Alexander-Bloch, Aaron F; Bertolero, Max A; Cook, Phil A; Gur, Raquel C; Gur, Ruben E; Larsen, Bart; Moore, Tyler M; Radhakrishnan, Hamsi; Roalf, David R; Shinohara, Russel T; Tapera, Tinashe M; Zhao, Chenying; Sotiras, Aristeidis; Davatzikos, Christos; Satterthwaite, Theodore D	February 10, 2023	Not Determined
36747838	Create Study	Individual Differences in Delay Discounting are Associated with Dorsal Prefrontal Cortex Connectivity in Youth.	bioRxiv : the preprint server for biology	Mehta, Kahini; Pines, Adam; Adebimpe, Azeez; Larsen, Bart; Bassett, Dani S; Calkins, Monica E; Baller, Erica; Gell, Martin; Patrick, Lauren M; Gur, Raquel E; Gur, Ruben C; Roalf, David R; Romer, Daniel; Wolf, Daniel H; Kable, Joseph W; Satterthwaite, Theodore D	January 26, 2023	Not Determined
36728904	Create Study	Within-Person Temporal Associations Among Self-Reported Physical Activity, Sleep, and Well-Being in College Students.	Psychosomatic medicine	McGowan, Amanda L; Boyd, Zachary M; Kang, Yoona; Bennett, Logan; Mucha, Peter J; Ochsner, Kevin N; Bassett, Dani S; Falk, Emily B; Lydon-Staley, David M	February 1, 2023	Not Determined
36605890	Create Study	Network controllability mediates the relationship between rigid structure and flexible dynamics.	Network neuroscience (Cambridge, Mass.)	Gu, Shi; Fotiadis, Panagiotis; Parkes, Linden; Xia, Cedric H; Gur, Ruben C; Gur, Raquel E; Roalf, David R; Satterthwaite, Theodore D; Bassett, Dani S	February 1, 2022	Not Determined
36595675	Create Study	Mindful attention promotes control of brain network dynamics for self-regulation and discontinues the past from the present.	Proceedings of the National Academy of Sciences of the United States of America	Zhou, Dale; Kang, Yoona; Cosme, Danielle; Jovanova, Mia; He, Xiaosong; Mahadevan, Arun; Ahn, Jeesung; Stanoi, Ovidia; Brynildsen, Julia K; Cooper, Nicole; Cornblath, Eli J; Parkes, Linden; Mucha, Peter J; Ochsner, Kevin N; Lydon-Staley, David M; Falk, Emily B; Bassett, Dani S	January 10, 2023	Not Determined
36437189	Create Study	Hierarchical functional system development supports executive function.	Trends in cognitive sciences	Keller, Arielle S; Sydnor, Valerie J; Pines, Adam; Fair, Damien A; Bassett, Dani S; Satterthwaite, Theodore D	February 1, 2023	Not Determined
36309332	Create Study	Spatially-enhanced clusterwise inference for testing and localizing intermodal correspondence.	NeuroImage	Weinstein, Sarah M; Vandekar, Simon N; Baller, Erica B; Tu, Danni; Adebimpe, Azeez; Tapera, Tinashe M; Gur, Ruben C; Gur, Raquel E; Detre, John A; Raznahan, Armin; Alexander-Bloch, Aaron F; Satterthwaite, Theodore D; Shinohara, Russell T; Park, Jun Young	December 1, 2022	Not Determined
36305770	Create Study	Caregiver monitoring, but not caregiver warmth, is associated with general cognition in two large sub-samples of youth.	Developmental science	Keller, Arielle S; Mackey, Allyson P; Pines, Adam; Fair, Damien; Feczko, Eric; Hoffmann, Mauricio S; Salum, Giovanni A; Barzilay, Ran; Satterthwaite, Theodore D	May 1, 2023	Not Determined
36242852	Create Study	Decision value signals in the ventromedial prefrontal cortex and motivational and hedonic symptoms across mood and psychotic disorders.	NeuroImage. Clinical	Souther, Min K; Wolf, Daniel H; Kazinka, Rebecca; Lee, Sangil; Ruparel, Kosha; Elliott, Mark A; Xu, Anna; Cieslak, Matthew; Prettyman, Greer; Satterthwaite, Theodore D; Kable, Joseph W	January 1, 2022	Not Determined
36192151	Create Study	The Age of Reason: Functional Brain Network Development during Childhood.	The Journal of neuroscience : the official journal of the Society for Neuroscience	Tooley, Ursula A; Park, Anne T; Leonard, Julia A; Boroshok, Austin L; McDermott, Cassidy L; Tisdall, Matthew D; Bassett, Dani S; Mackey, Allyson P	November 2, 2022	Not Determined
36064140	Create Study	Curation of BIDS (CuBIDS): A workflow and software package for streamlining reproducible curation of large BIDS datasets.	NeuroImage	Covitz, Sydney; Tapera, Tinashe M; Adebimpe, Azeez; Alexander-Bloch, Aaron F; Bertolero, Maxwell A; Feczko, Eric; Franco, Alexandre R; Gur, Raquel E; Gur, Ruben C; Hendrickson, Timothy; Houghton, Audrey; Mehta, Kahini; Murtha, Kristin; Perrone, Anders J; Robert-Fitzgerald, Tim; Schabdach, Jenna M; Shinohara, Russell T; Vogel, Jacob W; Zhao, Chenying; Fair, Damien A; Milham, Michael P; Cieslak, Matthew; Satterthwaite, Theodore D	November 1, 2022	Not Determined
35963892	Create Study	Neuroimaging of plasticity mechanisms in the human brain: from critical periods to psychiatric conditions.	Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology	Sydnor, Valerie J; Satterthwaite, Theodore D	January 1, 2023	Not Determined
35939696	Create Study	Sex differences in the functional topography of association networks in youth.	Proceedings of the National Academy of Sciences of the United States of America	Shanmugan, Sheila; Seidlitz, Jakob; Cui, Zaixu; Adebimpe, Azeez; Bassett, Danielle S; Bertolero, Maxwell A; Davatzikos, Christos; Fair, Damien A; Gur, Raquel E; Gur, Ruben C; Larsen, Bart; Li, Hongming; Pines, Adam; Raznahan, Armin; Roalf, David R; Shinohara, Russell T; Vogel, Jacob; Wolf, Daniel H; Fan, Yong; Alexander-Bloch, Aaron; Satterthwaite, Theodore D	August 16, 2022	Not Determined
35927072	Create Study	Linking Individual Differences in Personalized Functional Network Topography to Psychopathology in Youth.	Biological psychiatry	Cui, Zaixu; Pines, Adam R; Larsen, Bart; Sydnor, Valerie J; Li, Hongming; Adebimpe, Azeez; Alexander-Bloch, Aaron F; Bassett, Dani S; Bertolero, Max; Calkins, Monica E; Davatzikos, Christos; Fair, Damien A; Gur, Ruben C; Gur, Raquel E; Moore, Tyler M; Shanmugan, Sheila; Shinohara, Russell T; Vogel, Jacob W; Xia, Cedric H; Fan, Yong; Satterthwaite, Theodore D	December 15, 2022	Not Determined
35730989	Create Study	Voxel-wise intermodal coupling analysis of two or more modalities using local covariance decomposition.	Human brain mapping	Hu, Fengling; Weinstein, Sarah M; Baller, Erica B; Valcarcel, Alessandra M; Adebimpe, Azeez; Raznahan, Armin; Roalf, David R; Robert-Fitzgerald, Timothy E; Gonzenbach, Virgilio; Gur, Ruben C; Gur, Raquel E; Vandekar, Simon; Detre, John A; Linn, Kristin A; Alexander-Bloch, Aaron; Satterthwaite, Theodore D; Shinohara, Russell T	October 15, 2022	Not Determined
35689029	Create Study	ASLPrep: a platform for processing of arterial spin labeled MRI and quantification of regional brain perfusion.	Nature methods	Adebimpe, Azeez; Bertolero, Maxwell; Dolui, Sudipto; Cieslak, Matthew; Murtha, Kristin; Baller, Erica B; Boeve, Bradley; Boxer, Adam; Butler, Ellyn R; Cook, Phil; Colcombe, Stan; Covitz, Sydney; Davatzikos, Christos; Davila, Diego G; Elliott, Mark A; Flounders, Matthew W; Franco, Alexandre R; Gur, Raquel E; Gur, Ruben C; Jaber, Basma; McMillian, Corey; ALLFTD Consortium; Milham, Michael; Mutsaerts, Henk J M M; Oathes, Desmond J; Olm, Christopher A; Phillips, Jeffrey S; Tackett, Will; Roalf, David R; Rosen, Howard; Tapera, Tinashe M; Tisdall, M Dylan; Zhou, Dale; Esteban, Oscar; Poldrack, Russell A; Detre, John A; Satterthwaite, Theodore D	June 1, 2022	Not Determined
35660803	Create Study	Mobile footprinting: linking individual distinctiveness in mobility patterns to mood, sleep, and brain functional connectivity.	Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology	Xia, Cedric Huchuan; Barnett, Ian; Tapera, Tinashe M; Adebimpe, Azeez; Baker, Justin T; Bassett, Danielle S; Brotman, Melissa A; Calkins, Monica E; Cui, Zaixu; Leibenluft, Ellen; Linguiti, Sophia; Lydon-Staley, David M; Martin, Melissa Lynne; Moore, Tyler M; Murtha, Kristin; Piiwaa, Kayla; Pines, Adam; Roalf, David R; Rush-Goebel, Sage; Wolf, Daniel H; Ungar, Lyle H; Satterthwaite, Theodore D	August 1, 2022	Not Determined
35560117	Create Study	Structural imaging studies of patients with chronic pain: an anatomical likelihood estimate meta-analysis.	Pain	Henn, Alina T; Larsen, Bart; Frahm, Lennart; Xu, Anna; Adebimpe, Azeez; Scott, J Cobb; Linguiti, Sophia; Sharma, Vaishnavi; Basbaum, Allan I; Corder, Gregory; Dworkin, Robert H; Edwards, Robert R; Woolf, Clifford J; Habel, Ute; Eickhoff, Simon B; Eickhoff, Claudia R; Wagels, Lisa; Satterthwaite, Theodore D	January 1, 2023	Not Determined
35551181	Create Study	Dissociable multi-scale patterns of development in personalized brain networks.	Nature communications	Pines, Adam R; Larsen, Bart; Cui, Zaixu; Sydnor, Valerie J; Bertolero, Maxwell A; Adebimpe, Azeez; Alexander-Bloch, Aaron F; Davatzikos, Christos; Fair, Damien A; Gur, Ruben C; Gur, Raquel E; Li, Hongming; Milham, Michael P; Moore, Tyler M; Murtha, Kristin; Parkes, Linden; Thompson-Schill, Sharon L; Shanmugan, Sheila; Shinohara, Russell T; Weinstein, Sarah M; Bassett, Danielle S; Fan, Yong; Satterthwaite, Theodore D	May 12, 2022	Not Determined
35354053	Create Study	Developmental coupling of cerebral blood flow and fMRI fluctuations in youth.	Cell reports	Baller, Erica B; Valcarcel, Alessandra M; Adebimpe, Azeez; Alexander-Bloch, Aaron; Cui, Zaixu; Gur, Ruben C; Gur, Raquel E; Larsen, Bart L; Linn, Kristin A; O'Donnell, Carly M; Pines, Adam R; Raznahan, Armin; Roalf, David R; Sydnor, Valerie J; Tapera, Tinashe M; Tisdall, M Dylan; Vandekar, Simon; Xia, Cedric H; Detre, John A; Shinohara, Russell T; Satterthwaite, Theodore D	March 29, 2022	Not Determined
35119918	Create Study	A developmental reduction of the excitation:inhibition ratio in association cortex during adolescence.	Science advances	Larsen, Bart; Cui, Zaixu; Adebimpe, Azeez; Pines, Adam; Alexander-Bloch, Aaron; Bertolero, Max; Calkins, Monica E; Gur, Raquel E; Gur, Ruben C; Mahadevan, Arun S; Moore, Tyler M; Roalf, David R; Seidlitz, Jakob; Sydnor, Valerie J; Wolf, Daniel H; Satterthwaite, Theodore D	February 4, 2022	Not Determined
34826797	Create Study	Multi-Class ASD Classification via Label Distribution Learning with Class-Shared and Class-Specific Decomposition.	Medical image analysis	Wang, Jun; Zhang, Fengyexin; Jia, Xiuyi; Wang, Xin; Zhang, Han; Ying, Shihui; Wang, Qian; Shi, Jun; Shen, Dinggang	January 1, 2022	Not Determined
34818611	Create Study	Multi-scale semi-supervised clustering of brain images: Deriving disease subtypes.	Medical image analysis	Wen, Junhao; Varol, Erdem; Sotiras, Aristeidis; Yang, Zhijian; Chand, Ganesh B; Erus, Guray; Shou, Haochang; Abdulkadir, Ahmed; Hwang, Gyujoon; Dwyer, Dominic B; Pigoni, Alessandro; Dazzan, Paola; Kahn, Rene S; Schnack, Hugo G; Zanetti, Marcus V; Meisenzahl, Eva; Busatto, Geraldo F; Crespo-Facorro, Benedicto; Rafael, Romero-Garcia; Pantelis, Christos; Wood, Stephen J; Zhuo, Chuanjun; Shinohara, Russell T; Fan, Yong; Gur, Ruben C; Gur, Raquel E; Satterthwaite, Theodore D; Koutsouleris, Nikolaos; Wolf, Daniel H; Davatzikos, Christos; Alzheimer's Disease Neuroimaging Initiative	January 1, 2022	Not Determined
34686764	Create Study	Altered functional brain dynamics in chromosome 22q11.2 deletion syndrome during facial affect processing.	Molecular psychiatry	Cornblath, Eli J; Mahadevan, Arun; He, Xiaosong; Ruparel, Kosha; Lydon-Staley, David M; Moore, Tyler M; Gur, Ruben C; Zackai, Elaine H; Emanuel, Beverly; McDonald-McGinn, Donna M; Wolf, Daniel H; Satterthwaite, Theodore D; Roalf, David R; Gur, Raquel E; Bassett, Dani S	February 1, 2022	Not Determined
34667261	Create Study	Effect of mGluR2 positive allosteric modulation on frontostriatal working memory activation in schizophrenia.	Molecular psychiatry	Wolf, Daniel H; Zheng, David; Kohler, Christian; Turetsky, Bruce I; Ruparel, Kosha; Satterthwaite, Theodore D; Elliott, Mark A; March, Mary E; Cross, Alan J; Smith, Mark A; Zukin, Stephen R; Gur, Ruben C; Gur, Raquel E	February 1, 2022	Not Determined
34625567	Create Study	Relationship of ventral striatum activation during effort discounting to clinical amotivation severity in schizophrenia.	NPJ schizophrenia	Prettyman, Greer E; Kable, Joseph W; Didier, Paige; Shankar, Sheila; Satterthwaite, Theodore D; Davatzikos, Christos; Bilker, Warren B; Elliott, Mark A; Ruparel, Kosha; Wolf, Daniel H	October 8, 2021	Not Determined
34519385	Create Study	A simple permutation-based test of intermodal correspondence.	Human brain mapping	Weinstein, Sarah M; Vandekar, Simon N; Adebimpe, Azeez; Tapera, Tinashe M; Robert-Fitzgerald, Timothy; Gur, Ruben C; Gur, Raquel E; Raznahan, Armin; Satterthwaite, Theodore D; Alexander-Bloch, Aaron F; Shinohara, Russell T	November 1, 2021	Not Determined
34270921	Create Study	Neurodevelopment of the association cortices: Patterns, mechanisms, and implications for psychopathology.	Neuron	Sydnor, Valerie J; Larsen, Bart; Bassett, Danielle S; Alexander-Bloch, Aaron; Fair, Damien A; Liston, Conor; Mackey, Allyson P; Milham, Michael P; Pines, Adam; Roalf, David R; Seidlitz, Jakob; Xu, Ting; Raznahan, Armin; Satterthwaite, Theodore D	September 15, 2021	Not Determined
34239433	Create Study	FlywheelTools: Data Curation and Manipulation on the Flywheel Platform.	Frontiers in neuroinformatics	Tapera, Tinashe M; Cieslak, Matthew; Bertolero, Max; Adebimpe, Azeez; Aguirre, Geoffrey K; Butler, Ellyn R; Cook, Philip A; Davila, Diego; Elliott, Mark A; Linguiti, Sophia; Murtha, Kristin; Tackett, William; Detre, John A; Satterthwaite, Theodore D	January 1, 2021	Not Determined
34155395	Create Study	QSIPrep: an integrative platform for preprocessing and reconstructing diffusion MRI data.	Nature methods	Cieslak, Matthew; Cook, Philip A; He, Xiaosong; Yeh, Fang-Cheng; Dhollander, Thijs; Adebimpe, Azeez; Aguirre, Geoffrey K; Bassett, Danielle S; Betzel, Richard F; Bourque, Josiane; Cabral, Laura M; Davatzikos, Christos; Detre, John A; Earl, Eric; Elliott, Mark A; Fadnavis, Shreyas; Fair, Damien A; Foran, Will; Fotiadis, Panagiotis; Garyfallidis, Eleftherios; Giesbrecht, Barry; Gur, Ruben C; Gur, Raquel E; Kelz, Max B; Keshavan, Anisha; Larsen, Bart S; Luna, Beatriz; Mackey, Allyson P; Milham, Michael P; Oathes, Desmond J; Perrone, Anders; Pines, Adam R; Roalf, David R; Richie-Halford, Adam; Rokem, Ariel; Sydnor, Valerie J; Tapera, Tinashe M; Tooley, Ursula A; Vettel, Jean M; Yeatman, Jason D; Grafton, Scott T; Satterthwaite, Theodore D	July 1, 2021	Not Determined
34099190	Create Study	Network Controllability in Transmodal Cortex Predicts Positive Psychosis Spectrum Symptoms.	Biological psychiatry	Parkes, Linden; Moore, Tyler M; Calkins, Monica E; Cieslak, Matthew; Roalf, David R; Wolf, Daniel H; Gur, Ruben C; Gur, Raquel E; Satterthwaite, Theodore D; Bassett, Danielle S	September 15, 2021	Not Determined
33242721	Create Study	Towards precise resting-state fMRI biomarkers in psychiatry: synthesizing developments in transdiagnostic research, dimensional models of psychopathology, and normative neurodevelopment.	Current opinion in neurobiology	Parkes, Linden; Satterthwaite, Theodore D; Bassett, Danielle S	December 1, 2020	Not Determined
33119049	Create Study	Structural and Functional Brain Parameters Related to Cognitive Performance Across Development: Replication and Extension of the Parieto-Frontal Integration Theory in a Single Sample.	Cerebral cortex (New York, N.Y. : 1991)	Gur, Ruben C; Butler, Ellyn R; Moore, Tyler M; Rosen, Adon F G; Ruparel, Kosha; Satterthwaite, Theodore D; Roalf, David R; Gennatas, Efstathios D; Bilker, Warren B; Shinohara, Russell T; Port, Allison; Elliott, Mark A; Verma, Ragini; Davatzikos, Christos; Wolf, Daniel H; Detre, John A; Gur, Raquel E	February 5, 2021	Not Determined
33007777	Create Study	Neurocognitive and functional heterogeneity in depressed youth.	Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology	Baller, Erica B; Kaczkurkin, Antonia N; Sotiras, Aristeidis; Adebimpe, Azeez; Bassett, Danielle S; Calkins, Monica E; Chand, Ganesh B; Cui, Zaixu; Gur, Raquel E; Gur, Ruben C; Linn, Kristin A; Moore, Tyler M; Roalf, David R; Varol, Erdem; Wolf, Daniel H; Xia, Cedric H; Davatzikos, Christos; Satterthwaite, Theodore D	March 1, 2021	Not Determined
32563173	Create Study	Impact of childhood adversity on network reconfiguration dynamics during working memory in hypogonadal women.	Psychoneuroendocrinology	Shanmugan, Sheila; Cao, Wen; Satterthwaite, Theodore D; Sammel, Mary D; Ashourvan, Arian; Bassett, Danielle S; Ruparel, Kosha; Gur, Ruben C; Epperson, C Neill; Loughead, James	September 1, 2020	Not Determined
32553194	Create Study	Parsing Psychiatric Heterogeneity Through Common and Unique Circuit-Level Deficits.	Biological psychiatry	Satterthwaite, Theodore D; Feczko, Eric; Kaczkurkin, Antonia N; Fair, Damien A	July 1, 2020	Not Determined
32541774	Create Study	Multimodal network dynamics underpinning working memory.	Nature communications	Murphy, Andrew C; Bertolero, Maxwell A; Papadopoulos, Lia; Lydon-Staley, David M; Bassett, Danielle S	June 15, 2020	Not Determined
32510347	Create Study	Leveraging multi-shell diffusion for studies of brain development in youth and young adulthood.	Developmental cognitive neuroscience	Pines, Adam R; Cieslak, Matthew; Larsen, Bart; Baum, Graham L; Cook, Philip A; Adebimpe, Azeez; Dávila, Diego G; Elliott, Mark A; Jirsaraie, Robert; Murtha, Kristin; Oathes, Desmond J; Piiwaa, Kayla; Rosen, Adon F G; Rush, Sage; Shinohara, Russell T; Bassett, Danielle S; Roalf, David R; Satterthwaite, Theodore D	June 1, 2020	Not Determined
32444827	Create Study	Temporal sequences of brain activity at rest are constrained by white matter structure and modulated by cognitive demands.	Communications biology	Cornblath, Eli J; Ashourvan, Arian; Kim, Jason Z; Betzel, Richard F; Ciric, Rastko; Adebimpe, Azeez; Baum, Graham L; He, Xiaosong; Ruparel, Kosha; Moore, Tyler M; Gur, Ruben C; Gur, Raquel E; Shinohara, Russell T; Roalf, David R; Satterthwaite, Theodore D; Bassett, Danielle S	May 22, 2020	Not Determined
32441854	Create Study	On the Nature of Explanations Offered by Network Science: A Perspective From and for Practicing Neuroscientists.	Topics in cognitive science	Bertolero, Maxwell A; Bassett, Danielle S	October 1, 2020	Not Determined
32278095	Create Study	Finding the needle in a high-dimensional haystack: Canonical correlation analysis for neuroscientists.	NeuroImage	Wang, Hao-Ting; Smallwood, Jonathan; Mourao-Miranda, Janaina; Xia, Cedric Huchuan; Satterthwaite, Theodore D; Bassett, Danielle S; Bzdok, Danilo	August 1, 2020	Not Determined
32216874	Create Study	Optimization of energy state transition trajectory supports the development of executive function during youth.	eLife	Cui, Zaixu; Stiso, Jennifer; Baum, Graham L; Kim, Jason Z; Roalf, David R; Betzel, Richard F; Gu, Shi; Lu, Zhixin; Xia, Cedric H; He, Xiaosong; Ciric, Rastko; Oathes, Desmond J; Moore, Tyler M; Shinohara, Russell T; Ruparel, Kosha; Davatzikos, Christos; Pasqualetti, Fabio; Gur, Raquel E; Gur, Ruben C; Bassett, Danielle S; Satterthwaite, Theodore D	March 27, 2020	Not Determined
32216125	Create Study	Multi-scale network regression for brain-phenotype associations.	Human brain mapping	Xia, Cedric Huchuan; Ma, Zongming; Cui, Zaixu; Bzdok, Danilo; Thirion, Bertrand; Bassett, Danielle S; Satterthwaite, Theodore D; Shinohara, Russell T; Witten, Daniela M	July 1, 2020	Not Determined
32103250	Create Study	Two distinct neuroanatomical subtypes of schizophrenia revealed using machine learning.	Brain : a journal of neurology	Chand, Ganesh B; Dwyer, Dominic B; Erus, Guray; Sotiras, Aristeidis; Varol, Erdem; Srinivasan, Dhivya; Doshi, Jimit; Pomponio, Raymond; Pigoni, Alessandro; Dazzan, Paola; Kahn, Rene S; Schnack, Hugo G; Zanetti, Marcus V; Meisenzahl, Eva; Busatto, Geraldo F; Crespo-Facorro, Benedicto; Pantelis, Christos; Wood, Stephen J; Zhuo, Chuanjun; Shinohara, Russell T; Shou, Haochang; Fan, Yong; Gur, Ruben C; Gur, Raquel E; Satterthwaite, Theodore D; Koutsouleris, Nikolaos; Wolf, Daniel H; Davatzikos, Christos	March 1, 2020	Not Determined
32087950	Create Study	Approaches to Defining Common and Dissociable Neurobiological Deficits Associated With Psychopathology in Youth.	Biological psychiatry	Kaczkurkin, Antonia N; Moore, Tyler M; Sotiras, Aristeidis; Xia, Cedric Huchuan; Shinohara, Russell T; Satterthwaite, Theodore D	July 1, 2020	Not Determined
32078800	Create Study	Individual Variation in Functional Topography of Association Networks in Youth.	Neuron	Cui, Zaixu; Li, Hongming; Xia, Cedric H; Larsen, Bart; Adebimpe, Azeez; Baum, Graham L; Cieslak, Matt; Gur, Raquel E; Gur, Ruben C; Moore, Tyler M; Oathes, Desmond J; Alexander-Bloch, Aaron F; Raznahan, Armin; Roalf, David R; Shinohara, Russell T; Wolf, Daniel H; Davatzikos, Christos; Bassett, Danielle S; Fair, Damien A; Fan, Yong; Satterthwaite, Theodore D	April 22, 2020	Not Determined
31988059	Create Study	Longitudinal Development of Brain Iron Is Linked to Cognition in Youth.	The Journal of neuroscience : the official journal of the Society for Neuroscience	Larsen, Bart; Bourque, Josiane; Moore, Tyler M; Adebimpe, Azeez; Calkins, Monica E; Elliott, Mark A; Gur, Ruben C; Gur, Raquel E; Moberg, Paul J; Roalf, David R; Ruparel, Kosha; Turetsky, Bruce I; Vandekar, Simon N; Wolf, Daniel H; Shinohara, Russell T; Satterthwaite, Theodore D	February 26, 2020	Not Determined
31968320	Create Study	A practical guide to methodological considerations in the controllability of structural brain networks.	Journal of neural engineering	Karrer, Teresa M; Kim, Jason Z; Stiso, Jennifer; Kahn, Ari E; Pasqualetti, Fabio; Habel, Ute; Bassett, Danielle S	April 9, 2020	Not Determined
31917325	Create Study	Functional brain network architecture supporting the learning of social networks in humans.	NeuroImage	Tompson, Steven H; Kahn, Ari E; Falk, Emily B; Vettel, Jean M; Bassett, Danielle S	April 15, 2020	Not Determined
31896669	Create Study	A Multidimensional Neural Maturation Index Reveals Reproducible Developmental Patterns in Children and Adolescents.	The Journal of neuroscience : the official journal of the Society for Neuroscience	Truelove-Hill, Monica; Erus, Guray; Bashyam, Vishnu; Varol, Erdem; Sako, Chiharu; Gur, Ruben C; Gur, Raquel E; Koutsouleris, Nikolaos; Zhuo, Chuanjun; Fan, Yong; Wolf, Daniel H; Satterthwaite, Theodore D; Davatzikos, Christos	February 5, 2020	Not Determined
31874926	Create Study	Development of structure-function coupling in human brain networks during youth.	Proceedings of the National Academy of Sciences of the United States of America	Baum, Graham L; Cui, Zaixu; Roalf, David R; Ciric, Rastko; Betzel, Richard F; Larsen, Bart; Cieslak, Matthew; Cook, Philip A; Xia, Cedric H; Moore, Tyler M; Ruparel, Kosha; Oathes, Desmond J; Alexander-Bloch, Aaron F; Shinohara, Russell T; Raznahan, Armin; Gur, Raquel E; Gur, Ruben C; Bassett, Danielle S; Satterthwaite, Theodore D	January 7, 2020	Not Determined
31815502	Create Study	Within-person variability in sensation-seeking during daily life: Positive associations with alcohol use and self-defined risky behaviors.	Psychology of addictive behaviors : journal of the Society of Psychologists in Addictive Behaviors	Lydon-Staley, David M; Falk, Emily B; Bassett, Danielle S	March 1, 2020	Not Determined
31690494	Create Study	Neurostructural Heterogeneity in Youths With Internalizing Symptoms.	Biological psychiatry	Kaczkurkin, Antonia N; Sotiras, Aristeidis; Baller, Erica B; Barzilay, Ran; Calkins, Monica E; Chand, Ganesh B; Cui, Zaixu; Erus, Guray; Fan, Yong; Gur, Raquel E; Gur, Ruben C; Moore, Tyler M; Roalf, David R; Rosen, Adon F G; Ruparel, Kosha; Shinohara, Russell T; Varol, Erdem; Wolf, Daniel H; Davatzikos, Christos; Satterthwaite, Theodore D	March 1, 2020	Not Determined
31650093	Create Study	Digital phenotyping for psychiatry: Accommodating data and theory with network science methodologies.	Current opinion in biomedical engineering	Lydon-Staley, D M; Barnett, I; Satterthwaite, T D; Bassett, D S	March 1, 2019	Not Determined
31519052	Create Study	Within-person variability in curiosity during daily life and associations with well-being.	Journal of personality	Lydon-Staley, David M; Zurn, Perry; Bassett, Danielle S	August 1, 2020	Not Determined
31504253	Create Study	Unifying the Notions of Modularity and Core-Periphery Structure in Functional Brain Networks during Youth.	Cerebral cortex (New York, N.Y. : 1991)	Gu, Shi; Xia, Cedric Huchuan; Ciric, Rastko; Moore, Tyler M; Gur, Ruben C; Gur, Raquel E; Satterthwaite, Theodore D; Bassett, Danielle S	March 14, 2020	Not Determined
31476764	Create Study	Accelerated cortical thinning within structural brain networks is associated with irritability in youth.	Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology	Jirsaraie, Robert J; Kaczkurkin, Antonia N; Rush, Sage; Piiwia, Kayla; Adebimpe, Azeez; Bassett, Danielle S; Bourque, Josiane; Calkins, Monica E; Cieslak, Matthew; Ciric, Rastko; Cook, Philip A; Davila, Diego; Elliott, Mark A; Leibenluft, Ellen; Murtha, Kristin; Roalf, David R; Rosen, Adon F G; Ruparel, Kosha; Shinohara, Russell T; Sotiras, Aristeidis; Wolf, Daniel H; Davatzikos, Christos; Satterthwaite, Theodore D	December 1, 2019	Not Determined
31291606	Create Study	The community structure of functional brain networks exhibits scale-specific patterns of inter- and intra-subject variability.	NeuroImage	Betzel, Richard F; Bertolero, Maxwell A; Gordon, Evan M; Gratton, Caterina; Dosenbach, Nico U F; Bassett, Danielle S	November 15, 2019	Not Determined
31230463	Create Study	Evidence for Dissociable Linkage of Dimensions of Psychopathology to Brain Structure in Youths.	The American journal of psychiatry	Kaczkurkin, Antonia N; Park, Sophia Seonyeong; Sotiras, Aristeidis; Moore, Tyler M; Calkins, Monica E; Cieslak, Matthew; Rosen, Adon F G; Ciric, Rastko; Xia, Cedric Huchuan; Cui, Zaixu; Sharma, Anup; Wolf, Daniel H; Ruparel, Kosha; Pine, Daniel S; Shinohara, Russell T; Roalf, David R; Gur, Ruben C; Davatzikos, Christos; Gur, Raquel E; Satterthwaite, Theodore D	December 1, 2019	Not Determined
31220218	Create Study	Associations between Neighborhood SES and Functional Brain Network Development.	Cerebral cortex (New York, N.Y. : 1991)	Tooley, Ursula A; Mackey, Allyson P; Ciric, Rastko; Ruparel, Kosha; Moore, Tyler M; Gur, Ruben C; Gur, Raquel E; Satterthwaite, Theodore D; Bassett, Danielle S	January 10, 2020	Not Determined
30988437	Create Study	Network constraints on learnability of probabilistic motor sequences.	Nature human behaviour	Kahn, Ari E; Karuza, Elisabeth A; Vettel, Jean M; Bassett, Danielle S	December 1, 2018	Not Determined
30723287	Create Study	Alterations in white matter microstructure in individuals at persistent risk for psychosis.	Molecular psychiatry	Roalf, David R; de la Garza, Angel Garcia; Rosen, Adon; Calkins, Monica E; Moore, Tyler M; Quarmley, Megan; Ruparel, Kosha; Xia, Cedric Huchuan; Rupert, Petra E; Satterthwaite, Theodore D; Shinohara, Russell T; Elliott, Mark A; Gur, Ruben C; Gur, Raquel E	October 1, 2020	Not Determined
30508681	Create Study	Sex differences in network controllability as a predictor of executive function in youth.	NeuroImage	Cornblath, Eli J; Tang, Evelyn; Baum, Graham L; Moore, Tyler M; Adebimpe, Azeez; Roalf, David R; Gur, Ruben C; Gur, Raquel E; Pasqualetti, Fabio; Satterthwaite, Theodore D; Bassett, Danielle S	March 1, 2019	Not Determined
30446748	Create Study	Mitigating head motion artifact in functional connectivity MRI.	Nature protocols	Ciric, Rastko; Rosen, Adon F G; Erus, Guray; Cieslak, Matthew; Adebimpe, Azeez; Cook, Philip A; Bassett, Danielle S; Davatzikos, Christos; Wolf, Daniel H; Satterthwaite, Theodore D	December 1, 2018	Not Determined
30333998	Create Study	Knowledge gaps in the early growth of semantic feature networks.	Nature human behaviour	Sizemore, Ann E; Karuza, Elisabeth A; Giusti, Chad; Bassett, Danielle S	September 1, 2018	Not Determined
30068943	Create Study	Linked dimensions of psychopathology and connectivity in functional brain networks.	Nature communications	Xia, Cedric Huchuan; Ma, Zongming; Ciric, Rastko; Gu, Shi; Betzel, Richard F; Kaczkurkin, Antonia N; Calkins, Monica E; Cook, Philip A; García de la Garza, Angel; Vandekar, Simon N; Cui, Zaixu; Moore, Tyler M; Roalf, David R; Ruparel, Kosha; Wolf, Daniel H; Davatzikos, Christos; Gur, Ruben C; Gur, Raquel E; Shinohara, Russell T; Bassett, Danielle S; Satterthwaite, Theodore D	August 2018	Not Determined
30002509	Create Study	On the nature and use of models in network neuroscience.	Nature reviews. Neuroscience	Bassett, Danielle S; Zurn, Perry; Gold, Joshua I	September 1, 2018	Not Determined
29930385	Create Study	Sex differences in the developing brain: insights from multimodal neuroimaging.	Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology	Kaczkurkin, Antonia N; Raznahan, Armin; Satterthwaite, Theodore D	January 1, 2019	Not Determined
29729890	Create Study	Understanding the Emergence of Neuropsychiatric Disorders With Network Neuroscience.	Biological psychiatry. Cognitive neuroscience and neuroimaging	Bassett, Danielle S; Xia, Cedric Huchuan; Satterthwaite, Theodore D	September 1, 2018	Not Determined
29688290	Create Study	Gestational Age is Dimensionally Associated with Structural Brain Network Abnormalities Across Development.	Cerebral cortex (New York, N.Y. : 1991)	Nassar, Rula; Kaczkurkin, Antonia N; Xia, Cedric Huchuan; Sotiras, Aristeidis; Pehlivanova, Marieta; Moore, Tyler M; Garcia de La Garza, Angel; Roalf, David R; Rosen, Adon F G; Lorch, Scott A; Ruparel, Kosha; Shinohara, Russell T; Davatzikos, Christos; Gur, Ruben C; Gur, Raquel E; Satterthwaite, Theodore D	May 1, 2019	Not Determined

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Collection - Publications

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A link to the Create an NDA Study page that can be clicked to start creating an NDA Study with information such as the title, journal and authors automatically populated.
Not Determined Publication

Indicates that the publication has not yet been reviewed and/or marked as Relevant or Not Relevant so it has not been determined whether an NDA Study is expected.
Not Relevant Publication

A publication that is not based on data related to the aims of the grant/project associated with the Collection or not based on any data such as a review article and, therefore, an NDA Study is not expected to be created.
PubMed

PubMed provides citation information for biomedical and life sciences publications and is managed by the U.S. National Institutes of Health's National Library of Medicine.
PubMed ID

The PUBMed ID is the unique ID number for the publication as recorded in the PubMed database.
Relevant Publication

A publication that is based on data related to the aims of the grant/project associated with the Collection and, therefore, an NDA Study is expected to be created.

Contact NDA Help Desk

Data Expected List: Mandatory Data Structures

These data structures are mandatory for your NDA Collection. Please update the Targeted Enrollment number to accurately represent the number of subjects you expect to submit for the entire study.

For NIMH HIV-related research that involves human research participants: Select the dictionary or dictionaries most appropriate for your research. If your research does not require all three data dictionaries, just ignore the ones you do not need. There is no need to delete extra data dictionaries from your NDA Collection. You can adjust the Targeted Enrollment column in the Data Expected tab to “0” for those unnecessary data dictionaries. At least one of the three data dictionaries must have a non-zero value.

Data Expected	Targeted Enrollment	Initial Submission	Subjects Submitted	Initial Share	Subjects Shared	Status
Research Subject and Pedigree	140	01/15/2021	142	05/15/2021	142	Approved

To create your project's Data Expected list, use the "+New Data Expected" to add or request existing structures and to request new Data Structures that are not in the NDA Data Dictionary.

If the Structure you need already exists, locate it and specify your dates and enrollment when adding it to your Data Expected list. If you require changes to the Structure you need, select the indicator stating "No, it requires changes to meet research needs," and upload a file containing your requested changes.

If the structure you need is not yet defined in the Data Dictionary, you can select "Upload Definition" and attach the necessary materials to request its creation.

When selecting the expected dates for your data, make sure to follow the standard Data Sharing Regimen and choose dates within the date ranges that correspond to your project start and end dates.

Please visit the Completing Your Data Expected Tutorial for more information.

Data Expected List: Data Structures per Research Aims

These data structures are specific to your research aims and should list all data structures in which data will be collected and submitted for this NDA Collection. Please update the Targeted Enrollment number to accurately represent the number of subjects you expect to submit for the entire study.

Data Expected	Targeted Enrollment	Initial Submission	Subjects Submitted	Initial Share	Subjects Shared	Status
Positive and Negative Affect Schedule	140	01/15/2021	100	05/15/2021	100	Approved
Pubertal Development Scale (PDS)	140	02/15/2023	106	02/28/2024	106	Approved
Affective Reactivity Index	140	01/15/2021	134	05/15/2021	134	Approved
State-Trait Anxiety Inventory for Adults	140	01/15/2021	134	05/15/2021	134	Approved
Axis 1 Diagnoses	140	01/15/2021	0	05/15/2021	0	Approved
Imaging (Structural, fMRI, DTI, PET, microscopy)	140	01/15/2021	133	05/15/2021	126	Approved
Emotional Distress-Anxiety	140	01/15/2021	115	05/15/2021	115	Approved
Behavioral Inhibition Scale/Behavioral Activation Scale	140	01/15/2021	130	05/15/2021	130	Approved
Strengths and Weakness of ADHD Symptoms and Normal Behavior	140	01/15/2021	134	05/15/2021	134	Approved
PRIME Screen	140	01/15/2021	135	05/15/2021	135	Approved
Questionnaire for Substance Use	140	01/15/2021	92	05/15/2021	92	Approved

Structure not yet defined

No Status history for this Data Expected has been recorded yet

helpcenter.collection.data-expected-tab

Collection - Data Expected

The Data Expected tab displays the list of all data that NDA expects to receive in association with the Collection as defined by the contributing researcher, as well as the dates for the expected initial upload of the data, and when it is first expected to be shared, or with the research community. Above the primary table of Data Expected, any publications determined to be relevant to the data within the Collection are also displayed - members of the contributing research group can use these to define NDA Studies, connecting those papers to underlying data in NDA.

The tab is used both as a reference for those accessing shared data, providing information on what is expected and when it will be shared, and as the primary tracking mechanism for contributing projects. It is used by both contributing primary researchers, secondary researchers, and NIH Program and Grants Management staff.

Researchers who are starting their project need to update their Data Expected list to include all the Data Structures they are collecting under their grant and set their initial submission and sharing schedule according to the NDA Data Sharing Regimen.

To add existing Data Structures from the Data Dictionary, to request new Data Structure that are not in the Dictionary, or to request changes to existing Data Structures, click "+New Data Expected".

For step-by-step instructions on how to add existing Data Structures, request changes to an existing Structure, or request a new Data Structure, please visit the Completing Your Data Expected Tutorial.

If you are a contributing researcher creating this list for the first time, or making changes to the list as your project progress, please note the following:

Although items you add to the list and changes you make are displayed, they are not committed to the system until you Save the entire page using the "Save" button at the bottom of your screen. Please Save after every change to ensure none of your work is lost.
If you attempt to add a new structure, the title you provide must be unique - if another structure exists with the same name your change will fail.
Adding a new structure to this list is the only way to request the creation of a new Data Dictionary definition.

Frequently Asked Questions

What is an NDA Data Structure?

An NDA Data Structure is comprised of multiple Data Elements to make up an electronic definition of an assessment, measure, questionnaire, etc will have a corresponding Data Structure.
What is the NDA Data Dictionary?

The NDA Data Dictionary is comprised of electronic definitions known as Data Structures.

Glossary

Analyzed Data

Data specific to the primary aims of the research being conducted (e.g. outcome measures, other dependent variables, observations, laboratory results, analyzed images, volumetric data, etc.) including processed images.
Data Item

Items listed on the Data Expected list in the Collection which may be an individual and discrete Data Structure, Data Structure Category, or Data Structure Group.
Data Structure

A defined organization and group of Data Elements to represent an electronic definition of a measure, assessment, questionnaire, or collection of data points. Data structures that have been defined in the NDA Data Dictionary are available at https://nda.nih.gov/general-query.html?q=query=data-structure
Data Structure Category

An NDA term describing the affiliation of a Data Structure to a Category, which may be disease/disorder or diagnosis related (Depression, ADHD, Psychosis), specific to data type (MRI, eye tracking, omics), or type of data (physical exam, IQ).
Data Structure Group

A Data Item listed on the Data Expected tab of a Collection that indicates a group of Data Structures (e.g., ADOS or SCID) for which data may be submitted instead of a specific Data Structure identified by version, module, edition, etc. For example, the ADOS Data Structure Category includes every ADOS Data Structure such as ADOS Module 1, ADOS Module 2, ADOS Module 1 - 2nd Edition, etc. The SCID Data Structure Group includes every SCID Data Structure such as SCID Mania, SCID V Mania, SCID PTSD, SCID-V Diagnosis, and more.
Evaluated Data

A new Data Structure category, Evaluated Data is analyzed data resulting from the use of computational pipelines in the Cloud and can be uploaded directly back to a miNDAR database. Evaluated Data is expected to be listed as a Data Item in the Collection's Data Expected Tab.
Imaging Data

Imaging+ is an NDA term which encompasses all imaging related data including, but not limited to, images (DTI, MRI, PET, Structural, Spectroscopy, etc.) as well as neurosignal data (EEG, fMRI, MEG, EGG, eye tracking, etc.) and Evaluated Data.
Initial Share Date

Initial Submission and Initial Share dates should be populated according to the NDA Data Sharing Terms and Conditions. Any modifications to these will go through the approval processes outlined above. Data will be shared with authorized users upon publication (via an NDA Study) or 1-2 years after the grant end date specified on the first Notice of Award, as defined in the applicable Data Sharing Terms and Conditions.
Initial Submission Date

Initial Submission and Initial Share dates should be populated according to these NDA Data Sharing Terms and Conditions. Any modifications to these will go through the approval processes outlined above. Data for all subjects is not expected on the Initial Submission Date and modifications may be made as necessary based on the project's conduct.
Research Subject and Pedigree

An NDA created Data Structure used to convey basic information about the subject such as demographics, pedigree (links family GUIDs), diagnosis/phenotype, and sample location that are critical to allow for easier querying of shared data.
Submission Cycle

The NDA has two Submission Cycles per year - January 15 and July 15.
Submission Exemption

An interface to notify NDA that data may not be submitted during the upcoming/current submission cycle.

Contact NDA Help Desk

Collection Owners and those with Collection Administrator permission, may edit a collection. The following is currently available for Edit on this page:

Associated Studies

Studies that have been defined using data from a Collection are important criteria to determine the value of data shared. The number of subjects column displays the counts from this Collection that are included in a Study, out of the total number of subjects in that study. The Data Use column represents whether or not the study is a primary analysis of the data or a secondary analysis. State indicates whether the study is private or shared with the research community.

Study NameFilter by Study Name	DOIFilter by DOI	AbstractFilter by Abstract	Collection/Study SubjectsFilter by Collection/Study Subjects	Data UsageFilter by Data Usage	StateFilter by State
No records found.

helpcenter.collection.associated-studies-tab

Collection - Associated Studies

Clicking on the Study Title will open the study details in a new internet browser tab. The Abstract is available for viewing, providing the background explanation of the study, as provided by the Collection Owner.

Primary v. Secondary Analysis: The Data Usage column will have one of these two choices. An associated study that is listed as being used for Primary Analysis indicates at least some and potentially all of the data used was originally collected by the creator of the NDA Study. Secondary Analysis indicates the Study owner was not involved in the collection of data, and may be used as supporting data.

Private v. Shared State: Studies that remain private indicate the associated study is only available to users who are able to access the collection. A shared study is accessible to the general public.

Frequently Asked Questions

How do I associate a study to my collection?

Studies are associated to the Collection automatically when the data is defined in the Study.

Glossary

Associated Studies Tab

A tab in a Collection that lists the NDA Studies that have been created using data from that Collection including both Primary and Secondary Analysis NDA Studies.

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Frequently Asked Questions

Glossary