NIMH Data Archive - Data

Genomics

Neuroimaging

Phenotype¹

New Trial
Clinical Trial

¹ Numbers reported are subjects by age

New Project
Grant/Project Number

Format should be in the following format: Activity Code, Institute Abbreviation, and Serial Number. Grant Type, Support Year, and Suffix should be excluded. For example, grant 1R01MH123456-01A1 should be entered R01MH123456

Collection - Use Existing Experiment

To associate an experiment to the current collection, just select an axperiment from the table below then click the associate experiment button to persist your changes (saving the collection is not required). Note that once an experiment has been associated to two or more collections, the experiment will not longer be editable.

The table search feature is case insensitive and targets the experiment id, experiment name and experiment type columns. The experiment id is searched only when the search term entered is a number, and filtered using a startsWith comparison. When the search term is not numeric the experiment name is used to filter the results.

Select	Experiment Id	Experiment Name	Experiment Type	Created On

24	HI-NGS_R1	Omics	02/16/2011
475	MB1-10 (CHOP)	Omics	06/07/2016
490	Illumina Infinium PsychArray BeadChip Assay	Omics	07/07/2016
501	PharmacoBOLD Resting State	fMRI	07/27/2016
506	PVPREF	Omics	08/05/2016
509	ABC-CT Resting v2	EEG	08/18/2016
13	Comparison of FI expression in Autistic and Neurotypical Homo Sapiens	Omics	12/28/2010
18	AGRE/Broad Affymetrix 5.0 Genotype Experiment	Omics	01/06/2011
22	Stitching PCR Sequencing	Omics	02/14/2011
26	ASD_Methylation	Omics	03/01/2011
29	Microarray family 03 (father, mother, sibling)	Omics	03/24/2011
37	Standard paired-end sequencing of BCRs	Omics	04/19/2011
38	Illumina Mate-Pair BCR sequencing	Omics	04/19/2011
39	Custom Jumping Libraries	Omics	04/19/2011
40	Custom CapBP	Omics	04/19/2011
41	Immunofluorescence	Omics	05/11/2011
43	Autism brain sample genotyping, Illumina	Omics	05/16/2011
47	ARRA Autism Sequencing Collaboration at Baylor. SOLiD 4 System	Omics	08/01/2011
53	AGRE Omni1-quad	Omics	10/11/2011
59	AGP genotyping	Omics	04/03/2012
60	Ultradeep 454 sequencing of synaptic genes from postmortem cerebella of individuals with ASD and neurotypical controls	Omics	06/23/2012
63	Microemulsion PCR and Targeted Resequencing for Variant Detection in ASD	Omics	07/20/2012
76	Whole Genome Sequencing in Autism Families	Omics	01/03/2013
519	Resting	fMRI	11/08/2016
90	Genotyped IAN Samples	Omics	07/09/2013
91	NJLAGS Axiom Genotyping Array	Omics	07/16/2013
93	AGP genotyping (CNV)	Omics	09/06/2013
106	Longitudinal Sleep Study. H20 200. Channel set 2	EEG	11/07/2013
107	Longitudinal Sleep Study. H20 200. Channel set 3	EEG	11/07/2013
108	Longitudinal Sleep Study. AURA 200	EEG	11/07/2013
105	Longitudinal Sleep Study. H20 200. Channel set 1	EEG	11/07/2013
109	Longitudinal Sleep Study. AURA 400	EEG	11/07/2013
116	Gene Expression Analysis WG-6	Omics	01/07/2014
131	Jeste Lab UCLA ACEii: Charlie Brown and Sesame Street - Project 1	Eye Tracking	02/27/2014
132	Jeste Lab UCLA ACEii: Animacy - Project 1	Eye Tracking	02/27/2014
133	Jeste Lab UCLA ACEii: Mom Stranger - Project 2	Eye Tracking	02/27/2014
134	Jeste Lab UCLA ACEii: Face Emotion - Project 3	Eye Tracking	02/27/2014
145	AGRE/FMR1_Illumina.JHU	Omics	04/14/2014
146	AGRE/MECP2_Sanger.JHU	Omics	04/14/2014
147	AGRE/MECP2_Junior.JHU	Omics	04/14/2014
151	Candidate Gene Identification in familial Autism	Omics	06/09/2014
152	NJLAGS Whole Genome Sequencing	Omics	07/01/2014
154	Math Autism Study - Vinod Menon	fMRI	07/15/2014
155	Resting	fMRI	07/25/2014
156	Speech	fMRI	07/25/2014
159	Emotion	fMRI	07/25/2014
160	syllable contrast	EEG	07/29/2014
167	School-age naturalistic stimuli	Eye Tracking	09/19/2014
44	AGRE/Broad Affymetrix 5.0 Genotype Experiment	Omics	06/27/2011
45	Exome Sequencing of 20 Sporadic Cases of Autism Spectrum Disorder	Omics	07/15/2011

Collection - Add Experiment

Add Supporting Documentation

Funding Source:
URL:

To add an existing Data Structure, enter its title in the search bar. If you need to request changes, select the indicator "No, it requires changes to meet research needs" after selecting the Structure, and upload the file with the request changes specific to the selected Data Structure. Your file should follow the Request Changes Procedure. If the Data Structure does not exist, select "Request New Data Structure" and upload the appropriate zip file.

Use/Modify Existing Data Structure

Request New Data Structure

Targeted Enrollment:

Initial Submission Date:

Initial Share Date:

Data Structure Search:

Data Structures:

Submit

Request Submission Exemption

Not Eligible

The Data Expected list for this Collection shows some raw data as missing. Contact the NDA Help Desk with any questions.

Please confirm that you will not be enrolling any more subjects and that all raw data has been collected and submitted.

Collection Updated

Your Collection is now in Data Analysis phase and exempt from biannual submissions. Analyzed data is still expected prior to publication or no later than the project end date.

[CMS] Error

[CMS]

Unable to change collection phase where targeted enrollment is less than 90%

You have requested to move the sharing dates for the following assessments:

Data Expected Item	Original Sharing Date	New Sharing Date

Please provide a reason for this change, which will be sent to the Program Officers listed within this collection:

Explanation must be between 20 and 200 characters in length.

Please press Save or Cancel

PsychENCODE Consortium #5032

General
Experiments (93)
Shared Data
Publications (544)
Data Expected (14)
Associated Studies (1)

Collection Title	Collection Investigators	Collection Description
Collection Title:	PsychENCODE Consortium
Collection Investigators:	Zhiping Weng, Mark Gerstein
Collection Description:	Established in 2015 by the National Institute of Mental Health (NIMH), the PsychENCODE Consortium (PEC) is a multi-site investigation of the genomic basis of neuropsychiatric diseases. The aim is to create a resource of mechanistic insights to guide future therapeutic development. Genomic influences on neural function are remarkably complex, characterized by a highly polygenic risk architecture and often located in the non-coding parts of the genome. A key objective of PEC is to delineate an enhanced framework of regulatory genomic elements associated with neuropsychiatric disorders. Multidisciplinary PEC teams are working to generate large-scale gene expression and regulatory data from human postmortem brains across several major psychiatric disorders. Brain tissue is characterized across multiple developmental stages and include bulk tissue, single cell, and sorted cell types. The goal is to map and functionally validate disease‐associated variants, regulatory elements, genes and cell types. Data from Phase I was presented in a collection of 11 papers published in Science, Science Translational Medicine, and Science Advances. This collection is summarized in the Science special issue "Revealing the brain's molecular architecture" . Phase II – which will enhance cellular and developmental resolution – is currently underway.
Data Repository:	NIMH Data Archive
Permission Group:
Collection Creation Date:	09/20/2023
Data Use Limitations:	The use of this data is limited to Health/Medical/Biomedical purposes, and does not include the study of population origins or ancestry (HMB). Requestor agrees to make results of studies using the data available to the larger scientific community (PUB). Requestor must provide a letter of collaboration with the primary study investigator(s) (COL). Use of the data includes methods development research (e.g. development and testing of software or algorithms).
NIH Research Initiative:	PsychENCODE Consortium
Collection Phase:	Enrolling
Blinded Clinical Trial:	No
Total Funded Amount:	$126,781,779.00
Subjects Shared:	0

{"values":[]}

Loading Chart...

Funding Sources:

Funding Source Name	Funding Source URL
NIH - Extramural	None

Supporting Documentation:

Grant Information:

Project Number	Project Title	Start Date	End Date	Planned Enrollment	Actual Enrollment	Organization	Funds Obligated
U01MH103340-01	Genetic variants affect brain gene expression and risks of psychiatric disorders	06/10/2014	05/31/2017	Not Reported	Not Reported	UNIVERSITY OF ILLINOIS AT CHICAGO	$2,464,072.00
U01MH103339-01	Transcriptional and Epigenetic Signatures of Human Brain Development and Autism	06/15/2014	05/31/2017	Not Reported	Not Reported	YALE UNIVERSITY	$3,387,402.00
U01MH103365-01	Gene regulatory elements and transcriptome in iPSCs and embryonic human cortex	06/15/2014	05/31/2017	Not Reported	Not Reported	YALE UNIVERSITY	$1,462,340.00
U01MH103392-01	Cis-Regulatory Epigenome Mappings in Schizophrenia	06/15/2014	05/31/2017	Not Reported	Not Reported	ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI	$1,830,695.00
U01MH103346-01	The USC PsychENCODE Project	06/15/2014	05/31/2017	Not Reported	Not Reported	UNIVERSITY OF SOUTHERN CALIFORNIA	$1,462,501.00
R21MH102791-01	Establishing comprehensive and quantitative maps of DNA methylation in the develo	08/01/2014	07/31/2017	Not Reported	Not Reported	LIEBER INSTITUTE, INC.	$595,750.00
P50MH106934-01	Functional Genomics of Human Brain Development	09/19/2014	07/31/2019	Not Reported	Not Reported	YALE UNIVERSITY	$2,969,187.00
R01MH105472-01	Decoding schizophrenia-From GWAS to functional regulatory variants	09/19/2014	06/30/2018	Not Reported	Not Reported	DUKE UNIVERSITY	$1,573,679.00
R21MH103877-01	GABA Epigenomes in Autism	09/26/2014	08/31/2017	Not Reported	Not Reported	ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI	$447,115.00
R21MH105881-01	Long non-coding RNAs in gene regulatory networks underlying Autism	12/01/2014	11/30/2017	Not Reported	Not Reported	ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI	$465,413.00
R01MH105898-01	RNA Sequencing of the Limbic System in Bipolar Disorder	09/01/2015	02/28/2021	300	Not Reported	JOHNS HOPKINS UNIVERSITY	$3,137,397.00
R21MH105853-01	Decomposing cell type-specific marks in post-mortem human brain studies	09/03/2015	08/31/2019	Not Reported	Not Reported	LIEBER INSTITUTE, INC.	$508,750.00
R21MH109956-01	Characterizing the developing human brain transcriptome at single-base resolution	05/01/2016	04/30/2019	Not Reported	Not Reported	LIEBER INSTITUTE, INC.	$502,150.00
R01MH110920-01	1/2 Measuring translational dynamics and the proteome to identify potential brain biomakers for psychiatric disease	07/08/2016	04/30/2021	Not Reported	Not Reported	UPSTATE MEDICAL UNIVERSITY	$2,049,505.00
R01MH110905-01	2/2-Measuring translational dynamics and the proteome to identify potential brain biomarkers for psychiatric disease	07/08/2016	04/30/2020	Not Reported	Not Reported	UNIVERSITY OF CHICAGO	$1,092,180.00
R01MH110926-01	1/3 Integrative Genomic Analysis of Human Brain Development and Autism	07/21/2016	04/30/2021	Not Reported	Not Reported	YALE UNIVERSITY	$3,204,238.00
R01MH110928-01	3/3 Integrative Genomic Analysis of Human Brain Development and Autism	07/21/2016	04/30/2020	Not Reported	Not Reported	UNIVERSITY OF CALIFORNIA, SAN FRANCISCO	$1,294,456.00
R01MH109677-01	Risk genetic variants and cis regulation of gene expression in Bipolar Disorder	08/01/2016	05/31/2021	Not Reported	Not Reported	ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI	$2,617,098.00
R01MH110927-01	2/3 Integrative Genomic Analysis of Human Brain Development and Autism	08/10/2016	04/30/2020	Not Reported	Not Reported	UNIVERSITY OF CALIFORNIA LOS ANGELES	$2,073,628.00
R01MH110921-01	Molecular Profiling of Schizophrenia	09/01/2016	12/31/2020	Not Reported	Not Reported	ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI	$5,122,345.00
R01MH111721-01	Integrative Genomics of the Corticolimbic Circuit in Major Depressive Disorder	09/06/2017	05/31/2024	400	Not Reported	JOHNS HOPKINS UNIVERSITY	$4,163,018.00
R01MH109715-01	Mapping the role of long noncoding RNAs in gene regulatory networks in schizophrenia	12/01/2017	11/30/2024	Not Reported	Not Reported	ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI	$3,982,639.00
R01MH117406-01	The Spatiotemporal Landscape of the Human Brain Epitranscriptome	07/01/2018	03/31/2025	Not Reported	Not Reported	WEILL MEDICAL COLL OF CORNELL UNIV	$3,311,487.00
U01MH116438-01	Massively parallel characterization of psychiatric disease associated regulatory elements in defined cell types	07/06/2018	12/31/2023	Not Reported	Not Reported	UNIVERSITY OF CALIFORNIA, SAN FRANCISCO	$3,339,852.00
U01MH116488-01	1/2 Cell Type and Region-Specific Regulatory Networks in Human Brain Development and Disorders	07/06/2018	03/31/2024	Not Reported	Not Reported	YALE UNIVERSITY	$6,470,162.00
U01MH116492-01	1/2 Discovery and validation of neuronal enhancers associated with the development of psychiatric disorders	07/06/2018	03/31/2023	Not Reported	Not Reported	UNIV OF MASSACHUSETTS MED SCH WORCESTER	$3,650,615.00
R01MH117292-01	Site 3/3, Understanding PTSD through Postmortem Targeted Brain Multiomics	07/25/2018	04/30/2024	Not Reported	Not Reported	MCLEAN HOSPITAL	$3,039,085.00
R01MH117293-01	1/3 Understanding PTSD through Postmortem Targeted Brain Multi-omics	07/25/2018	04/30/2024	Not Reported	Not Reported	UNIVERSITY OF TEXAS AT AUSTIN	$2,848,179.00
R01MH117291-01	2/3 Understanding PTSD through Postmortem Targeted Brain Multi-omics	07/25/2018	04/30/2024	Not Reported	Not Reported	LIEBER INSTITUTE, INC.	$3,521,419.00
U01MH116441-01	Dynamic RNA Modifications in human brain development and autism	08/01/2018	04/30/2023	Not Reported	Not Reported	EMORY UNIVERSITY	$4,939,503.00
R56MH114899-01	2/3 Chromatin regulation during brain development and in ASD	08/01/2018	07/31/2020	Not Reported	Not Reported	MAYO CLINIC ROCHESTER	$129,927.00
R56MH114901-01	3/3 Chromatin regulation during brain development and in ASD	08/01/2018	07/31/2021	Not Reported	Not Reported	DUKE UNIVERSITY	$355,941.00
R56MH114911-01	1/3 Chromatin regulation during brain development and in ASD	08/03/2018	07/31/2020	Not Reported	Not Reported	YALE UNIVERSITY	$550,583.00
U01MH116487-01	2/2 - Cell Type and Region-Specific Regulatory Networks in Human Brain Development and Disorders	08/15/2018	05/31/2023	Not Reported	Not Reported	UNIVERSITY OF CALIFORNIA, SAN FRANCISCO	$2,279,704.00
U01MH116489-01	2/2 Discovery and validation of neuronal enhancers associated with the development of psychiatric disorders	08/17/2018	04/30/2024	Not Reported	Not Reported	UNIVERSITY OF CALIFORNIA LOS ANGELES	$4,523,653.00
U01MH116442-01	The 3D genome in transcriptional regulation across the postnatal life span, with implications for schizophrenia and bipolar disorder	09/01/2018	05/31/2024	Not Reported	Not Reported	ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI	$5,895,770.00
U01DA048279-01	Functional genomic resource and integrative model of dopaminergic circuitry associated with psychiatric disease	05/01/2019	02/29/2024	Not Reported	Not Reported	ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI	$2,181,466.00
R01MH116529-01	Integrated, cell type specific functional genomics analyses of regulatory sequence elements and their dynamic interaction networks in neuropsychiatric brain tissues	06/20/2019	03/31/2024	Not Reported	Not Reported	STANFORD UNIVERSITY	$6,965,362.00
R01MH121521-01	Isoform-level probabilistic transcriptome-wide association to undercover neurogenetic mechanisms underlying complex psychiatric traits	01/03/2020	11/30/2024	Not Reported	Not Reported	UNIVERSITY OF PENNSYLVANIA	$3,305,028.00
U01MH122592-01	3/3 High-resolution mapping of cell type-specific DNA (hydroxy)methylation in the human brain during postnatal development and in psychiatric disease	05/01/2020	02/28/2025	Not Reported	Not Reported	UNIVERSITY OF CALIFORNIA, SAN DIEGO	$656,659.00
U01MH122591-01	1/3 High-resolution mapping of cell type-specific DNA (hydroxy)methylation in the human brain during postnatal development and in psychiatric disease.	05/01/2020	02/28/2025	Not Reported	Not Reported	UPSTATE MEDICAL UNIVERSITY	$789,640.00
U01MH122590-01	2/3 High-resolution mapping of cell type-specific DNA (hydroxy)methylation in the human brain during postnatal development and in psychiatric disease	05/01/2020	02/28/2025	Not Reported	Not Reported	ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI	$2,180,793.00
U01MH122849-01	Spatial registration of gene expression in the human brain	05/01/2020	04/30/2024	Not Reported	Not Reported	LIEBER INSTITUTE, INC.	$1,747,260.00
U01MH122678-01	1/2 Identification and Validation of Expression Quantitative Trait Loci (eQTLs) in discrete cell types across human brain development	02/01/2021	11/30/2025	Not Reported	Not Reported	YALE UNIVERSITY	$2,878,549.00
U01MH122681-01	2/2 - Identification and Validation of Expression Quantitative Trait Loci (eQTLs) in discrete cell types across human brain development	02/10/2021	05/31/2026	Not Reported	Not Reported	UNIVERSITY OF OXFORD	$1,661,899.00
R01MH126393-01	Laminar dissection of cortical human brain gene expression in neuropsychiatric disorders	06/23/2021	03/31/2026	Not Reported	Not Reported	LIEBER INSTITUTE, INC.	$3,156,959.00
R01MH125516-01	Assessing Genomic, Regulatory and Transcriptional Variation at Single Nuclei Resolution in the Brains of Individuals with Autism Spectrum Disorder	07/27/2021	05/31/2026	Not Reported	Not Reported	UNIVERSITY OF CALIFORNIA, SAN FRANCISCO	$2,249,998.00
U01MH122509-01	Discovery and validation of genetic variation impacting the gene regulatory landscape during human cortical development	08/01/2021	04/30/2026	Not Reported	Not Reported	UNIV OF NORTH CAROLINA CHAPEL HILL	$2,302,532.00
R01MH126459-01	Gene Expression Regulation in Brains of East Asian, African, and European Descent Explains Schizophrenia GWAS in Diverse Populations.	03/25/2022	01/31/2027	Not Reported	Not Reported	UPSTATE MEDICAL UNIVERSITY	$2,184,035.00
R01MH129301-01	Sex-specific trajectories in epigenomic regulation of brain patterning	04/15/2022	01/31/2027	Not Reported	Not Reported	YALE UNIVERSITY	$2,795,411.00
R21MH129817-01	Mapping human brain cell type-specific isoform usage in ASD	05/11/2022	04/30/2025	Not Reported	Not Reported	ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI	$464,750.00

Clinical Trials:

helpcenter.collection.general-tab

Collection - General Tab

Fields available for edit on the top portion of the page include:

Collection Title
Investigators
Collection Description
Collection Phase
Funding Source
Clinical Trials

Collection Phase: The current status of a research project submitting data to an NDA Collection, based on the timing of the award and/or the data that have been submitted.

Pre-Enrollment: The default entry made when the NDA Collection is created.
Enrolling: Data have been submitted to the NDA Collection or the NDA Data Expected initial submission date has been reached for at least one data structure category in the NDA Collection.
Data Analysis: Subject level data collection for the research project is completed and has been submitted to the NDA Collection. The NDA Collection owner or the NDA Help Desk may set this phase when they’ve confirmed data submission is complete and submitted subject counts match at least 90% of the target enrollment numbers in the NDA Data Expected. Data submission reminders will be turned off for the NDA Collection.
Funding Completed: The NIH grant award (or awards) associated with the NDA Collection has reached its end date. NDA Collections in Funding Completed phase are assigned a subphase to indicate the status of data submission.
- The Data Expected Subphase indicates that NDA expects more data will be submitted
- The Closeout Subphase indicates the data submission is complete.
- The Sharing Not Met Subphase indicates that data submission was not completed as expected.

Blinded Clinical Trial Status:

This status is set by a Collection Owner and indicates the research project is a double blinded clinical trial. When selected, the public view of Data Expected will show the Data Expected items and the Submission Dates, but the targeted enrollment and subjects submitted counts will not be displayed.
Targeted enrollment and subjects submitted counts are visible only to NDA Administrators and to the NDA Collection or as the NDA Collection Owner.
When an NDA Collection that is flagged Blinded Clinical Trial reaches the maximum data sharing date for that Data Repository (see https://nda.nih.gov/nda/sharing-regimen.html), the embargo on Data Expected information is released.

Funding Source

The organization(s) responsible for providing the funding is listed here.

Supporting Documentation

Users with Submission privileges, as well as Collection Owners, Program Officers, and those with Administrator privileges, may upload and attach supporting documentation. By default, supporting documentation is shared to the general public, however, the option is also available to limit this information to qualified researchers only.

Grant Information

Identifiable details are displayed about the Project of which the Collection was derived from. You may click in the Project Number to view a full report of the Project captured by the NIH.

Clinical Trials

Any data that is collected to support or further the research of clinical studies will be available here. Collection Owners and those with Administrator privileges may add new clinical trials.

Frequently Asked Questions

How does the NIMH Data Archive (NDA) determine which Permission Group data are submitted into?

During Collection creation, NDA staff determine the appropriate Permission Group based on the type of data to be submitted, the type of access that will be available to data access users, and the information provided by the Program Officer during grant award.
How do I know when a NDA Collection has been created?

When a Collection is created by NDA staff, an email notification will automatically be sent to the PI(s) of the grant(s) associated with the Collection to notify them.
Is a single grant number ever associated with more than one Collection?

The NDA system does not allow for a single grant to be associated with more than one Collection; therefore, a single grant will not be listed in the Grant Information section of a Collection for more than one Collection.
Why is there sometimes more than one grant included in a Collection?

In general, each Collection is associated with only one grant; however, multiple grants may be associated if the grant has multiple competing segments for the same grant number or if multiple different grants are all working on the same project and it makes sense to hold the data in one Collection (e.g., Cooperative Agreements).

Glossary

Administrator Privilege

A privilege provided to a user associated with an NDA Collection or NDA Study whereby that user can perform a full range of actions including providing privileges to other users.
Collection Owner

Generally, the Collection Owner is the contact PI listed on a grant. Only one NDA user is listed as the Collection owner. Most automated emails are primarily sent to the Collection Owner.
Collection Phase
The Collection Phase provides information on data submission as opposed to grant/project completion so while the Collection phase and grant/project phase may be closely related they are often different. Collection users with Administrative Privileges are encouraged to edit the Collection Phase. The Program Officer as listed in eRA (for NIH funded grants) may also edit this field. Changes must be saved by clicking the Save button at the bottom of the page. This field is sortable alphabetically in ascending or descending order. Collection Phase options include:
- Pre-Enrollment: A grant/project has started, but has not yet enrolled subjects.
- Enrolling: A grant/project has begun enrolling subjects. Data submission is likely ongoing at this point.
- Data Analysis: A grant/project has completed enrolling subjects and has completed all data submissions.
- Funding Completed: A grant/project has reached the project end date.
Collection Title

An editable field with the title of the Collection, which is often the title of the grant associated with the Collection.
Grant

Provides the grant number(s) for the grant(s) associated with the Collection. The field is a hyperlink so clicking on the Grant number will direct the user to the grant information in the NIH Research Portfolio Online Reporting Tools (RePORT) page.
Supporting Documentation

Various documents and materials to enable efficient use of the data by investigators unfamiliar with the project and may include the research protocol, questionnaires, and study manuals.
NIH Research Initiative

NDA Collections may be organized by scientific similarity into NIH Research Initiatives, to facilitate query tool user experience. NIH Research Initiatives map to one or multiple Funding Opportunity Announcements.
Permission Group

Access to shared record-level data in NDA is provisioned at the level of a Permission Group. NDA Permission Groups consist of one or multiple NDA Collections that contain data with the same subject consents.
Planned Enrollment

Number of human subject participants to be enrolled in an NIH-funded clinical research study. The data is provided in competing applications and annual progress reports.
Actual Enrollment

Number of human subjects enrolled in an NIH-funded clinical research study. The data is provided in annual progress reports.
NDA Collection

A virtual container and organization structure for data and associated documentation from one grant or one large project/consortium. It contains tools for tracking data submission and allows investigators to define a wide array of other elements that provide context for the data, including all general information regarding the data and source project, experimental parameters used to collect any event-based data contained in the Collection, methods, and other supporting documentation. They also allow investigators to link underlying data to an NDA Study, defining populations and subpopulations specific to research aims.
Data Use Limitations

Data Use Limitations (DULs) describe the appropriate secondary use of a dataset and are based on the original informed consent of a research participant. NDA only accepts consent-based data use limitations defined by the NIH Office of Science Policy.
Total Subjects Shared

The total number of unique subjects for whom data have been shared and are available for users with permission to access data.

Contact NDA Help Desk

ID	Name	Created Date	Status	Type
2498	Test Experiment: Please Disregard	03/04/2024	Approved	Omics
2501	ATACSeq_MouseHAL	03/05/2024	Approved	Omics
2502	rnaSeq_NHP-Chimpanzee	03/05/2024	Approved	Omics
2503	rnaSeq_NHP-Macaque	03/05/2024	Approved	Omics
2504	3Dchromatin_HI-C	03/06/2024	Approved	Omics
2505	rnaSeq_BipSeq	03/06/2024	Approved	Omics
2506	ATACSeq_BrainDev3D	03/06/2024	Approved	Omics
2507	rnaSeq_BrainDev3D	03/06/2024	Approved	Omics
2508	HI-C_BrainDev3D	03/06/2024	Approved	Omics
2509	ChIPSeq_BrainDev3D	03/06/2024	Approved	Omics
2510	ATACSeq_BrainGVEX	03/06/2024	Approved	Omics
2511	rnaSeq_BrainGVEX	03/06/2024	Approved	Omics
2512	RPPA_BrainGVEX	03/06/2024	Approved	Omics
2513	TMT_BrainGVEX	03/06/2024	Approved	Omics
2514	miRNASeq_BrainGVEX	03/06/2024	Approved	Omics
2515	WGS_BrainGVEX	03/06/2024	Approved	Omics
2516	rnaSeq_BrainSpan	03/06/2024	Approved	Omics
2517	ChIPSeq_BrainTF_2	03/06/2024	Approved	Omics
2518	ATACSeq_BrainTF	03/06/2024	Approved	Omics
2519	Methylation_BrainTF	03/06/2024	Approved	Omics
2520	rnaSeq_BrainTF	03/06/2024	Approved	Omics
2521	WGS_BrainTF	03/06/2024	Approved	Omics
2522	rnaSeq_BrainVar	03/06/2024	Approved	Omics
2523	WGS_BrainVar	03/06/2024	Approved	Omics
2524	rnaSeq_CMC	03/06/2024	Approved	Omics
2525	scrnaSeq_CMC	03/06/2024	Approved	Omics
2526	ChIPSeq_CNON	03/06/2024	Approved	Omics
2527	HI-C_CNON	03/06/2024	Approved	Omics
2528	NOMeseq_CNON	03/06/2024	Approved	Omics
2529	HI-C_DopaModel	03/06/2024	Approved	Omics
2530	rnaSeq_DopaModel	03/06/2024	Approved	Omics
2531	ChIPSeq_EpiDiff	03/06/2024	Approved	Omics
2532	ChIPSeq_EpiDiff-II	03/06/2024	Approved	Omics
2533	Bisulfite-Seq_EpiGABA	03/06/2024	Approved	Omics
2534	ChIPSeq_EpiGABA	03/06/2024	Approved	Omics
2535	ERRBS_EpiGABA	03/06/2024	Approved	Omics
2536	Methylation_EpiGABA	03/06/2024	Approved	Omics
2537	rnaSeq_EpiGABA	03/06/2024	Approved	Omics
2538	ChIPSeq_EpiMap	03/06/2024	Approved	Omics
2539	ATACSeq_HumanFC	03/06/2024	Approved	Omics
2540	Bisulfite-Seq_LIBD-WGBS	03/06/2024	Approved	Omics
2541	Bisulfite-Seq_LIBD-WGBS-SCZD	03/06/2024	Approved	Omics
2542	HI-C_MidbrainGenomics	03/06/2024	Approved	Omics
2543	Bisulfite-Seq_NeuMet	03/06/2024	Approved	Omics
2544	oxBSseq_NeuMet	03/06/2024	Approved	Omics
2545	ATACSeq_NeuREs	03/06/2024	Approved	Omics
2546	CUTTag_NeuREs	03/06/2024	Approved	Omics
2547	ChIPSeq_NeuREs	03/06/2024	Approved	Omics
2548	rnaSeq_NeuREs	03/06/2024	Approved	Omics
2549	scrnaSeq_NeuREs	03/06/2024	Approved	Omics
2550	scrnaSeq_SZBDMulti-Seq	03/06/2024	Approved	Omics
2551	rnaSeq_SingleCellRNAseq	03/06/2024	Approved	Omics
2552	ChIPSeq_UCLA-ASD	03/06/2024	Approved	Omics
2553	Methylation_UCLA-ASD	03/06/2024	Approved	Omics
2554	rnaSeq_UCLA-ASD	03/06/2024	Approved	Omics
2555	bulkrnaSeq_UCLA-ASD	03/06/2024	Approved	Omics
2556	mirnaSeq_UCLA-ASD	03/06/2024	Approved	Omics
2557	scATACSeq_UCLA-ASD	03/06/2024	Approved	Omics
2558	scrnaSeq_UCLA-ASD	03/06/2024	Approved	Omics
2559	WGBS_WGBS-Pilot	03/06/2024	Approved	Omics
2560	ChIPSeq_Yale-ASD	03/06/2024	Approved	Omics
2561	rnaSeq_Yale-ASD	03/06/2024	Approved	Omics
2562	WGBS_flowRNA-WGBS	03/06/2024	Approved	Omics
2563	ATACSeq_iPSC	03/06/2024	Approved	Omics
2564	ChIPSeq_iPSC	03/06/2024	Approved	Omics
2565	rnaSeq_iPSC	03/06/2024	Approved	Omics
2566	scrnaSeq_iPSC	03/06/2024	Approved	Omics
2567	ATACSeq_iPSC-ASD	03/06/2024	Approved	Omics
2568	HI-C_iPSC-HiC	03/07/2024	Approved	Omics
2569	Proteomics_iPSCNeuroDiff	03/07/2024	Approved	Omics
2570	rnaSeq_iPSCNeuroDiff	03/07/2024	Approved	Omics
2571	isoSeq_lncRNA-Pilot	03/07/2024	Approved	Omics
2572	rnaSeq_lncRNA-Pilot	03/07/2024	Approved	Omics
2573	ATACSeq_referenceBrain	03/07/2024	Approved	Omics
2574	Bisulfite-Seq_referenceBrain	03/07/2024	Approved	Omics
2575	ChIPSeq_referenceBrain	03/07/2024	Approved	Omics
2576	HI-C_referenceBrain	03/07/2024	Approved	Omics
2578	isoSeq_referenceBrain	03/07/2024	Approved	Omics
2579	rnaSeq_referenceBrain	03/07/2024	Approved	Omics
2580	RPPA_referenceBrain	03/07/2024	Approved	Omics
2581	ATACSeq_CMC_Controlled	03/07/2024	Approved	Omics
2582	ATACSeq_CMC_Open	03/07/2024	Approved	Omics
2583	snpArray_BipSeq	03/14/2024	Approved	Omics
2584	snpArray_LIBD-WGBS	03/14/2024	Approved	Omics
2585	RNASeq_CMC_Controlled	03/14/2024	Approved	Omics
2586	RNASeq_CMC_Open	03/14/2024	Approved	Omics
2588	SNP_CMC_Controlled	03/15/2024	Approved	Omics
2589	WGS_CMS_Controlled	03/15/2024	Approved	Omics
2591	WGS_LIBD-WGBS-SCZD	03/21/2024	Approved	Omics
2593	ChIPSeq_Capstone	03/25/2024	Approved	Omics
2594	RNASeq_Capstone	03/25/2024	Approved	Omics
2595	WGS_Capstone	03/25/2024	Approved	Omics
2596	RNASeq_PsychiPSCneurons	03/25/2024	Approved	Omics

helpcenter.collection.experiments-tab

Collection - Experiments

The number of Experiments included is displayed in parentheses next to the tab name. You may download all experiments associated with the Collection via the Download button. You may view individual experiments by clicking the Experiment Name and add them to the Filter Cart via the Add to Cart button.

Collection Owners, Program Officers, and users with Submission or Administrative Privileges for the Collection may create or edit an Experiment.

Please note: The creation of an NDA Experiment does not necessarily mean that data collected, according to the defined Experiment, has been submitted or shared.

Frequently Asked Questions

Can an Experiment be associated with more than one Collection?
Yes -see the “Copy” button in the bottom left when viewing an experiment. There are two actions that can be performed via this button:
1. Copy the experiment with intent for modifications.
2. Associate the experiment to the collection. No modifications can be made to the experiment.

Glossary

Experiment Status

An Experiment must be Approved before data using the associated Experiment_ID may be uploaded.
Experiment ID

The ID number automatically generated by NDA which must be included in the appropriate file when uploading data to link the Experiment Definition to the subject record.

Contact NDA Help Desk

helpcenter.collection.shared-data-tab

Collection - Shared Data

This tab provides a quick overview of the Data Structure title, Data Type, and Number of Subjects that are currently Shared for the Collection. The information presented in this tab is automatically generated by NDA and cannot be edited. If no information is visible on this tab, this would indicate the Collection does not have shared data or the data is private.

The shared data is available to other researchers who have permission to access data in the Collection's designated Permission Group(s). Use the Download button to get all shared data from the Collection to the Filter Cart.

Frequently Asked Questions

How will I know if another researcher uses data that I shared through the NIMH Data Archive (NDA)?

To see what data your project have submitted are being used by a study, simply go the Associated Studies tab of your collection. Alternatively, you may review an NDA Study Attribution Report available on the General tab.
Can I get a supplement to share data from a completed research project?

Often it becomes more difficult to organize and format data electronically after the project has been completed and the information needed to create a GUID may not be available; however, you may still contact a program staff member at the appropriate funding institution for more information.
Can I get a supplement to share data from a research project that is still ongoing?

Unlike completed projects where researchers may not have the information needed to create a GUID and/or where the effort needed to organize and format data becomes prohibitive, ongoing projects have more of an opportunity to overcome these challenges. Please contact a program staff member at the appropriate funding institution for more information.

Glossary

Data Structure

A defined organization and group of Data Elements to represent an electronic definition of a measure, assessment, questionnaire, or collection of data points. Data structures that have been defined in the NDA Data Dictionary are available at https://nda.nih.gov/general-query.html?q=query=data-structure
Data Type

A grouping of data by similar characteristics such as Clinical Assessments, Omics, or Neurosignal data.
Shared

The term 'Shared' generally means available to others; however, there are some slightly different meanings based on what is Shared. A Shared NDA Study is viewable and searchable publicly regardless of the user's role or whether the user has an NDA account. A Shared NDA Study does not necessarily mean that data used in the NDA Study have been shared as this is independently determined. Data are shared according the schedule defined in a Collection's Data Expected Tab and/or in accordance with data sharing expectations in the NDA Data Sharing Terms and Conditions. Additionally, Supporting Documentation uploaded to a Collection may be shared independent of whether data are shared.

Contact NDA Help Desk

Collection Owners and those with Collection Administrator permission, may edit a collection. The following is currently available for Edit on this page:

Publications

Publications relevant to NDA data are listed below. Most displayed publications have been associated with the grant within Pubmed. Use the "+ New Publication" button to add new publications. Publications relevant/not relevant to data expected are categorized. Relevant publications are then linked to the underlying data by selecting the Create Study link. Study provides the ability to define cohorts, assign subjects, define outcome measures and lists the study type, data analysis and results. Analyzed data and results are expected in this way.

PubMed ID	Study	Title	Journal	Authors	Date	Status
38862827	Create Study	Telomeric RNA (TERRA) increases in response to spaceflight and high-altitude climbing.	Communications biology	Al-Turki, Taghreed M; Maranon, David G; Nelson, Christopher B; Lewis, Aidan M; Luxton, Jared J; Taylor, Lynn E; Altina, Noelia; Wu, Fei; Du, Huixun; Kim, JangKeun; Damle, Namita; Overbey, Eliah; Meydan, Cem; Grigorev, Kirill; Winer, Daniel A; Furman, David; Mason, Christopher E; Bailey, Susan M	June 11, 2024	Not Determined
38862781	Create Study	Transcriptomics analysis reveals molecular alterations underpinning spaceflight dermatology.	Communications medicine	Cope, Henry; Elsborg, Jonas; Demharter, Samuel; McDonald, J Tyson; Wernecke, Chiara; Parthasarathy, Hari; Unadkat, Hriday; Chatrathi, Mira; Claudio, Jennifer; Reinsch, Sigrid; Avci, Pinar; Zwart, Sara R; Smith, Scott M; Heer, Martina; Muratani, Masafumi; Meydan, Cem; Overbey, Eliah; Kim, Jangkeun; Chin, Christopher R; Park, Jiwoon; Schisler, Jonathan C; Mason, Christopher E; Szewczyk, Nathaniel J; Willis, Craig R G; Salam, Amr; Beheshti, Afshin	June 11, 2024	Not Determined
38862620	Create Study	Spaceflight induces changes in gene expression profiles linked to insulin and estrogen.	Communications biology	Mathyk, Begum Aydogan; Tabetah, Marshall; Karim, Rashid; Zaksas, Victoria; Kim, JangKeun; Anu, R I; Muratani, Masafumi; Tasoula, Alexia; Singh, Ruth Subhash; Chen, Yen-Kai; Overbey, Eliah; Park, Jiwoon; Cope, Henry; Fazelinia, Hossein; Povero, Davide; Borg, Joseph; Klotz, Remi V; Yu, Min; Young, Steven L; Mason, Christopher E; Szewczyk, Nathaniel; St Clair, Riley M; Karouia, Fathi; Beheshti, Afshin	June 11, 2024	Not Determined
38862573	Create Study	Aging and putative frailty biomarkers are altered by spaceflight.	Scientific reports	Camera, Andrea; Tabetah, Marshall; Castañeda, Veronica; Kim, JangKeun; Galsinh, Aman Singh; Haro-Vinueza, Alissen; Salinas, Ivonne; Seylani, Allen; Arif, Shehbeel; Das, Saswati; Mori, Marcelo A; Carano, Anthony; de Oliveira, Lorraine Christine; Muratani, Masafumi; Barker, Richard; Zaksas, Victoria; Goel, Chirag; Dimokidis, Eleni; Taylor, Deanne M; Jeong, Jisu; Overbey, Eliah; Meydan, Cem; Porterfield, D Marshall; Díaz, Juan Esteban; Caicedo, Andrés; Schisler, Jonathan C; Laiakis, Evagelia C; Mason, Christopher E; Kim, Man S; Karouia, Fathi; Szewczyk, Nathaniel J; Beheshti, Afshin	June 11, 2024	Not Determined
38862542	Create Study	Space radiation damage rescued by inhibition of key spaceflight associated miRNAs.	Nature communications	McDonald, J Tyson; Kim, JangKeun; Farmerie, Lily; Johnson, Meghan L; Trovao, Nidia S; Arif, Shehbeel; Siew, Keith; Tsoy, Sergey; Bram, Yaron; Park, Jiwoon; Overbey, Eliah; Ryon, Krista; Haltom, Jeffrey; Singh, Urminder; Enguita, Francisco J; Zaksas, Victoria; Guarnieri, Joseph W; Topper, Michael; Wallace, Douglas C; Meydan, Cem; Baylin, Stephen; Meller, Robert; Muratani, Masafumi; Porterfield, D Marshall; Kaufman, Brett; Mori, Marcelo A; Walsh, Stephen B; Sigaudo-Roussel, Dominique; Mebarek, Saida; Bottini, Massimo; Marquette, Christophe A; Wurtele, Eve Syrkin; Schwartz, Robert E; Galeano, Diego; Mason, Christopher E; Grabham, Peter; Beheshti, Afshin	June 11, 2024	Not Determined
38862516	Create Study	Single-cell multi-ome and immune profiles of the Inspiration4 crew reveal conserved, cell-type, and sex-specific responses to spaceflight.	Nature communications	Kim, JangKeun; Tierney, Braden T; Overbey, Eliah G; Dantas, Ezequiel; Fuentealba, Matias; Park, Jiwoon; Narayanan, S Anand; Wu, Fei; Najjar, Deena; Chin, Christopher R; Meydan, Cem; Loy, Conor; Mathyk, Begum; Klotz, Remi; Ortiz, Veronica; Nguyen, Khiem; Ryon, Krista A; Damle, Namita; Houerbi, Nadia; Patras, Laura I; Schanzer, Nathan; Hutchinson, Gwyneth A; Foox, Jonathan; Bhattacharya, Chandrima; Mackay, Matthew; Afshin, Evan E; Hirschberg, Jeremy Wain; Kleinman, Ashley S; Schmidt, Julian C; Schmidt, Caleb M; Schmidt, Michael A; Beheshti, Afshin; Matei, Irina; Lyden, David; Mullane, Sean; Asadi, Amran; Lenz, Joan S; Mzava, Omary; Yu, Min; Ganesan, Saravanan; De Vlaminck, Iwijn; Melnick, Ari M; Barisic, Darko; Winer, Daniel A; Zwart, Sara R; Crucian, Brian E; Smith, Scott M; Mateus, Jaime; Furman, David; Mason, Christopher E	June 11, 2024	Not Determined
38862509	Create Study	Collection of biospecimens from the inspiration4 mission establishes the standards for the space omics and medical atlas (SOMA).	Nature communications	Overbey, Eliah G; Ryon, Krista; Kim, JangKeun; Tierney, Braden T; Klotz, Remi; Ortiz, Veronica; Mullane, Sean; Schmidt, Julian C; MacKay, Matthew; Damle, Namita; Najjar, Deena; Matei, Irina; Patras, Laura; Garcia Medina, J Sebastian; Kleinman, Ashley S; Wain Hirschberg, Jeremy; Proszynski, Jacqueline; Narayanan, S Anand; Schmidt, Caleb M; Afshin, Evan E; Innes, Lucinda; Saldarriaga, Mateo Mejia; Schmidt, Michael A; Granstein, Richard D; Shirah, Bader; Yu, Min; Lyden, David; Mateus, Jaime; Mason, Christopher E	June 11, 2024	Not Determined
38862505	Create Study	Astronaut omics and the impact of space on the human body at scale.	Nature communications	Rutter, Lindsay A; Cope, Henry; MacKay, Matthew J; Herranz, Raúl; Das, Saswati; Ponomarev, Sergey A; Costes, Sylvain V; Paul, Amber M; Barker, Richard; Taylor, Deanne M; Bezdan, Daniela; Szewczyk, Nathaniel J; Muratani, Masafumi; Mason, Christopher E; Giacomello, Stefania	June 11, 2024	Not Determined
38862496	Create Study	Direct RNA sequencing of astronaut blood reveals spaceflight-associated m6A increases and hematopoietic transcriptional responses.	Nature communications	Grigorev, Kirill; Nelson, Theodore M; Overbey, Eliah G; Houerbi, Nadia; Kim, JangKeun; Najjar, Deena; Damle, Namita; Afshin, Evan E; Ryon, Krista A; Thierry-Mieg, Jean; Thierry-Mieg, Danielle; Melnick, Ari M; Mateus, Jaime; Mason, Christopher E	June 11, 2024	Not Determined
38862494	Create Study	Spatial multi-omics of human skin reveals KRAS and inflammatory responses to spaceflight.	Nature communications	Park, Jiwoon; Overbey, Eliah G; Narayanan, S Anand; Kim, JangKeun; Tierney, Braden T; Damle, Namita; Najjar, Deena; Ryon, Krista A; Proszynski, Jacqueline; Kleinman, Ashley; Hirschberg, Jeremy Wain; MacKay, Matthew; Afshin, Evan E; Granstein, Richard; Gurvitch, Justin; Hudson, Briana M; Rininger, Aric; Mullane, Sean; Church, Sarah E; Meydan, Cem; Church, George; Beheshti, Afshin; Mateus, Jaime; Mason, Christopher E	June 11, 2024	Not Determined
38862487	Create Study	Single-cell analysis identifies conserved features of immune dysfunction in simulated microgravity and spaceflight.	Nature communications	Wu, Fei; Du, Huixun; Overbey, Eliah; Kim, JangKeun; Makhijani, Priya; Martin, Nicolas; Lerner, Chad A; Nguyen, Khiem; Baechle, Jordan; Valentino, Taylor R; Fuentealba, Matias; Bartleson, Juliet M; Halaweh, Heather; Winer, Shawn; Meydan, Cem; Garrett-Bakelman, Francine; Sayed, Nazish; Melov, Simon; Muratani, Masafumi; Gerencser, Akos A; Kasler, Herbert G; Beheshti, Afshin; Mason, Christopher E; Furman, David; Winer, Daniel A	June 11, 2024	Not Determined
38862484	Create Study	Cosmic kidney disease: an integrated pan-omic, physiological and morphological study into spaceflight-induced renal dysfunction.	Nature communications	Siew, Keith; Nestler, Kevin A; Nelson, Charlotte; D'Ambrosio, Viola; Zhong, Chutong; Li, Zhongwang; Grillo, Alessandra; Wan, Elizabeth R; Patel, Vaksha; Overbey, Eliah; Kim, JangKeun; Yun, Sanghee; Vaughan, Michael B; Cheshire, Chris; Cubitt, Laura; Broni-Tabi, Jessica; Al-Jaber, Maneera Yousef; Boyko, Valery; Meydan, Cem; Barker, Peter; Arif, Shehbeel; Afsari, Fatemeh; Allen, Noah; Al-Maadheed, Mohammed; Altinok, Selin; Bah, Nourdine; Border, Samuel; Brown, Amanda L; Burling, Keith; Cheng-Campbell, Margareth; Colón, Lorianna M; Degoricija, Lovorka; Figg, Nichola; Finch, Rebecca; Foox, Jonathan; Faridi, Pouya; French, Alison; Gebre, Samrawit; Gordon, Peter; Houerbi, Nadia; Valipour Kahrood, Hossein; Kiffer, Frederico C; Klosinska, Aleksandra S; Kubik, Angela; Lee, Han-Chung; Li, Yinghui; Lucarelli, Nicholas; Marullo, Anthony L; Matei, Irina; McCann, Colleen M; Mimar, Sayat; Naglah, Ahmed; Nicod, Jérôme; O'Shaughnessy, Kevin M; Oliveira, Lorraine Christine De; Oswalt, Leah; Patras, Laura Ioana; Lai Polo, San-Huei; Rodríguez-Lopez, María; Roufosse, Candice; Sadeghi-Alavijeh, Omid; Sanchez-Hodge, Rebekah; Paul, Anindya S; Schittenhelm, Ralf Bernd; Schweickart, Annalise; Scott, Ryan T; Choy Lim Kam Sian, Terry Chin; da Silveira, Willian A; Slawinski, Hubert; Snell, Daniel; Sosa, Julio; Saravia-Butler, Amanda M; Tabetah, Marshall; Tanuwidjaya, Erwin; Walker-Samuel, Simon; Yang, Xiaoping; Yasmin; Zhang, Haijian; Godovac-Zimmermann, Jasminka; Sarder, Pinaki; Sanders, Lauren M; Costes, Sylvain V; Campbell, Robert A A; Karouia, Fathi; Mohamed-Alis, Vidya; Rodriques, Samuel; Lynham, Steven; Steele, Joel Ricky; Baranzini, Sergio; Fazelinia, Hossein; Dai, Zhongquan; Uruno, Akira; Shiba, Dai; Yamamoto, Masayuki; A C Almeida, Eduardo; Blaber, Elizabeth; Schisler, Jonathan C; Eisch, Amelia J; Muratani, Masafumi; Zwart, Sara R; Smith, Scott M; Galazka, Jonathan M; Mason, Christopher E; Beheshti, Afshin; Walsh, Stephen B	June 11, 2024	Not Determined
38862473	Create Study	Ethical considerations for the age of non-governmental space exploration.	Nature communications	Seylani, Allen; Galsinh, Aman Singh; Tasoula, Alexia; I, Anu R; Camera, Andrea; Calleja-Agius, Jean; Borg, Joseph; Goel, Chirag; Kim, JangKeun; Clark, Kevin B; Das, Saswati; Arif, Shehbeel; Boerrigter, Michael; Coffey, Caroline; Szewczyk, Nathaniel; Mason, Christopher E; Manoli, Maria; Karouia, Fathi; Schwertz, Hansjörg; Beheshti, Afshin; Tulodziecki, Dana	June 11, 2024	Not Determined
38862464	Create Study	Secretome profiling reveals acute changes in oxidative stress, brain homeostasis, and coagulation following short-duration spaceflight.	Nature communications	Houerbi, Nadia; Kim, JangKeun; Overbey, Eliah G; Batra, Richa; Schweickart, Annalise; Patras, Laura; Lucotti, Serena; Ryon, Krista A; Najjar, Deena; Meydan, Cem; Damle, Namita; Chin, Christopher; Narayanan, S Anand; Guarnieri, Joseph W; Widjaja, Gabrielle; Beheshti, Afshin; Tobias, Gabriel; Vatter, Fanny; Hirschberg, Jeremy Wain; Kleinman, Ashley; Afshin, Evan E; MacKay, Matthew; Chen, Qiuying; Miller, Dawson; Gajadhar, Aaron S; Williamson, Lucy; Tandel, Purvi; Yang, Qiu; Chu, Jessica; Benz, Ryan; Siddiqui, Asim; Hornburg, Daniel; Gross, Steven; Shirah, Bader; Krumsiek, Jan; Mateus, Jaime; Mao, Xiao; Matei, Irina; Mason, Christopher E	June 11, 2024	Not Determined
38850535	Create Study	Five autism-associated transcriptional regulators target shared loci proximal to brain-expressed genes.	Cell reports	Fazel Darbandi, Siavash; An, Joon-Yong; Lim, Kenneth; Page, Nicholas F; Liang, Lindsay; Young, David M; Ypsilanti, Athena R; State, Matthew W; Nord, Alex S; Sanders, Stephan J; Rubenstein, John L R	June 7, 2024	Not Determined
38798605	Create Study	CellWalker2: multi-omic discovery of hierarchical cell type relationships and their associations with genomic annotations.	bioRxiv : the preprint server for biology	Hu, Zhirui; Przytycki, Pawel F; Pollard, Katherine S	May 17, 2024	Not Determined
38781976	Create Study	Haploinsufficiency underlies the neurodevelopmental consequences of SLC6A1 variants.	American journal of human genetics	Silva, Dina Buitrago; Trinidad, Marena; Ljungdahl, Alicia; Revalde, Jezrael L; Berguig, Geoffrey Y; Wallace, William; Patrick, Cory S; Bomba, Lorenzo; Arkin, Michelle; Dong, Shan; Estrada, Karol; Hutchinson, Keino; LeBowitz, Jonathan H; Schlessinger, Avner; Johannesen, Katrine M; Møller, Rikke S; Giacomini, Kathleen M; Froelich, Steven; Sanders, Stephan J; Wuster, Arthur	June 6, 2024	Not Determined
38781390	Create Study	Massively parallel characterization of regulatory elements in the developing human cortex.	Science (New York, N.Y.)	Deng, Chengyu; Whalen, Sean; Steyert, Marilyn; Ziffra, Ryan; Przytycki, Pawel F; Inoue, Fumitaka; Pereira, Daniela A; Capauto, Davide; Norton, Scott; Vaccarino, Flora M; PsychENCODE Consortium‡; Pollen, Alex A; Nowakowski, Tomasz J; Ahituv, Nadav; Pollard, Katherine S; PsychENCODE Consortium	May 24, 2024	Not Determined
38781388	Create Study	Single-cell multi-cohort dissection of the schizophrenia transcriptome.	Science (New York, N.Y.)	Ruzicka, W Brad; Mohammadi, Shahin; Fullard, John F; Davila-Velderrain, Jose; Subburaju, Sivan; Tso, Daniel Reed; Hourihan, Makayla; Jiang, Shan; Lee, Hao-Chih; Bendl, Jaroslav; PsychENCODE Consortium§; Voloudakis, Georgios; Haroutunian, Vahram; Hoffman, Gabriel E; Roussos, Panos; Kellis, Manolis; PsychENCODE Consortium	May 24, 2024	Not Determined
38781370	Create Study	A data-driven single-cell and spatial transcriptomic map of the human prefrontal cortex.	Science (New York, N.Y.)	Huuki-Myers, Louise A; Spangler, Abby; Eagles, Nicholas J; Montgomery, Kelsey D; Kwon, Sang Ho; Guo, Boyi; Grant-Peters, Melissa; Divecha, Heena R; Tippani, Madhavi; Sriworarat, Chaichontat; Nguyen, Annie B; Ravichandran, Prashanthi; Tran, Matthew N; Seyedian, Arta; PsychENCODE Consortium†; Hyde, Thomas M; Kleinman, Joel E; Battle, Alexis; Page, Stephanie C; Ryten, Mina; Hicks, Stephanie C; Martinowich, Keri; Collado-Torres, Leonardo; Maynard, Kristen R; PsychENCODE Consortium	May 24, 2024	Not Determined
38781369	Create Study	Single-cell genomics and regulatory networks for 388 human brains.	Science (New York, N.Y.)	Emani, Prashant S; Liu, Jason J; Clarke, Declan; Jensen, Matthew; Warrell, Jonathan; Gupta, Chirag; Meng, Ran; Lee, Che Yu; Xu, Siwei; Dursun, Cagatay; Lou, Shaoke; Chen, Yuhang; Chu, Zhiyuan; Galeev, Timur; Hwang, Ahyeon; Li, Yunyang; Ni, Pengyu; Zhou, Xiao; PsychENCODE Consortium‡; Bakken, Trygve E; Bendl, Jaroslav; Bicks, Lucy; Chatterjee, Tanima; Cheng, Lijun; Cheng, Yuyan; Dai, Yi; Duan, Ziheng; Flaherty, Mary; Fullard, John F; Gancz, Michael; Garrido-Martín, Diego; Gaynor-Gillett, Sophia; Grundman, Jennifer; Hawken, Natalie; Henry, Ella; Hoffman, Gabriel E; Huang, Ao; Jiang, Yunzhe; Jin, Ting; Jorstad, Nikolas L; Kawaguchi, Riki; Khullar, Saniya; Liu, Jianyin; Liu, Junhao; Liu, Shuang; Ma, Shaojie; Margolis, Michael; Mazariegos, Samantha; Moore, Jill; Moran, Jennifer R; Nguyen, Eric; Phalke, Nishigandha; Pjanic, Milos; Pratt, Henry; Quintero, Diana; Rajagopalan, Ananya S; Riesenmy, Tiernon R; Shedd, Nicole; Shi, Manman; Spector, Megan; Terwilliger, Rosemarie; Travaglini, Kyle J; Wamsley, Brie; Wang, Gaoyuan; Xia, Yan; Xiao, Shaohua; Yang, Andrew C; Zheng, Suchen; Gandal, Michael J; Lee, Donghoon; Lein, Ed S; Roussos, Panos; Sestan, Nenad; Weng, Zhiping; White, Kevin P; Won, Hyejung; Girgenti, Matthew J; Zhang, Jing; Wang, Daifeng; Geschwind, Daniel; Gerstein, Mark; PsychENCODE Consortium	May 24, 2024	Not Determined
38781368	Create Study	Cross-ancestry atlas of gene, isoform, and splicing regulation in the developing human brain.	Science (New York, N.Y.)	Wen, Cindy; Margolis, Michael; Dai, Rujia; Zhang, Pan; Przytycki, Pawel F; Vo, Daniel D; Bhattacharya, Arjun; Matoba, Nana; Tang, Miao; Jiao, Chuan; Kim, Minsoo; Tsai, Ellen; Hoh, Celine; Aygün, Nil; Walker, Rebecca L; Chatzinakos, Christos; Clarke, Declan; Pratt, Henry; PsychENCODE Consortium†; Peters, Mette A; Gerstein, Mark; Daskalakis, Nikolaos P; Weng, Zhiping; Jaffe, Andrew E; Kleinman, Joel E; Hyde, Thomas M; Weinberger, Daniel R; Bray, Nicholas J; Sestan, Nenad; Geschwind, Daniel H; Roeder, Kathryn; Gusev, Alexander; Pasaniuc, Bogdan; Stein, Jason L; Love, Michael I; Pollard, Katherine S; Liu, Chunyu; Gandal, Michael J; PsychENCODE Consortium	May 24, 2024	Not Determined
38781336	Create Study	Evaluating performance and applications of sample-wise cell deconvolution methods on human brain transcriptomic data.	Science advances	Dai, Rujia; Chu, Tianyao; Zhang, Ming; Wang, Xuan; Jourdon, Alexandre; Wu, Feinan; Mariani, Jessica; Vaccarino, Flora M; Lee, Donghoon; Fullard, John F; Hoffman, Gabriel E; Roussos, Panos; Wang, Yue; Wang, Xusheng; Pinto, Dalila; Wang, Sidney H; Zhang, Chunling; PsychENCODE consortium; Chen, Chao; Liu, Chunyu	May 24, 2024	Not Determined
38781321	Create Study	Transcriptomic sex differences in postmortem brain samples from patients with psychiatric disorders.	Science translational medicine	Xia, Yan; Xia, Cuihua; Jiang, Yi; Chen, Yu; Zhou, Jiaqi; Dai, Rujia; Han, Cong; Mao, Zhongzheng; PsychENCODE Consortium; Liu, Chunyu; Chen, Chao	May 29, 2024	Not Determined
38778015	Create Study	Integrating human endogenous retroviruses into transcriptome-wide association studies highlights novel risk factors for major psychiatric conditions.	Nature communications	Duarte, Rodrigo R R; Pain, Oliver; Bendall, Matthew L; de Mulder Rougvie, Miguel; Marston, Jez L; Selvackadunco, Sashika; Troakes, Claire; Leung, Szi Kay; Bamford, Rosemary A; Mill, Jonathan; O'Reilly, Paul F; Srivastava, Deepak P; Nixon, Douglas F; Powell, Timothy R	May 22, 2024	Not Determined
38766095	Create Study	Prioritizing disease-related rare variants by integrating gene expression data.	Research square	Guo, Hanmin; Urban, Alexander Eckehart; Wong, Wing Hung	May 10, 2024	Not Determined
38713721	Create Study	Cartography of teneurin and latrophilin expression reveals spatiotemporal axis heterogeneity in the mouse hippocampus during development.	PLoS biology	Liakath-Ali, Kif; Refaee, Rebecca; Südhof, Thomas C	May 1, 2024	Not Determined
38712228	Create Study	Massively parallel reporter assays and mouse transgenic assays provide complementary information about neuronal enhancer activity.	bioRxiv : the preprint server for biology	Kosicki, Michael; Cintrón, Dianne Laboy; Page, Nicholas F; Georgakopoulos-Soares, Ilias; Akiyama, Jennifer A; Plajzer-Frick, Ingrid; Novak, Catherine S; Kato, Momoe; Hunter, Riana D; von Maydell, Kianna; Barton, Sarah; Godfrey, Patrick; Beckman, Erik; Sanders, Stephan J; Pennacchio, Len A; Ahituv, Nadav	April 23, 2024	Not Determined
38712198	Create Study	An integrated single-nucleus and spatial transcriptomics atlas reveals the molecular landscape of the human hippocampus.	bioRxiv : the preprint server for biology	Nelson, Erik D; Tippani, Madhavi; Ramnauth, Anthony D; Divecha, Heena R; Miller, Ryan A; Eagles, Nicholas J; Pattie, Elizabeth A; Kwon, Sang Ho; Bach, Svitlana V; Kaipa, Uma M; Yao, Jianing; Kleinman, Joel E; Collado-Torres, Leonardo; Han, Shizhong; Maynard, Kristen R; Hyde, Thomas M; Martinowich, Keri; Page, Stephanie C; Hicks, Stephanie C	April 28, 2024	Not Determined
38659857	Create Study	Precision and Accuracy of Single-Cell/Nuclei RNA Sequencing Data.	bioRxiv : the preprint server for biology	Dai, Rujia; Zhang, Ming; Chu, Tianyao; Kopp, Richard; Zhang, Chunling; Liu, Kefu; Wang, Yue; Wang, Xusheng; Chen, Chao; Liu, Chunyu	April 15, 2024	Not Determined
38658803	Create Study	Multimodal joint deconvolution and integrative signature selection in proteomics.	Communications biology	Pan, Yue; Wang, Xusheng; Sun, Jiao; Liu, Chunyu; Peng, Junmin; Li, Qian	April 24, 2024	Not Determined
38645177	Create Study	Sex differences in brain cell-type specific chromatin accessibility in schizophrenia.	Research square	Roussos, Panos; Ma, Yixuan; Girdhar, Kiran; Hoffman, Gabriel; Fullard, John; Bendl, Jaroslav	April 4, 2024	Not Determined
38645094	Create Study	De novo variants in the non-coding spliceosomal snRNA gene RNU4-2 are a frequent cause of syndromic neurodevelopmental disorders.	medRxiv : the preprint server for health sciences	Chen, Yuyang; Dawes, Ruebena; Kim, Hyung Chul; Stenton, Sarah L; Walker, Susan; Ljungdahl, Alicia; Lord, Jenny; Ganesh, Vijay S; Ma, Jialan; Martin-Geary, Alexandra C; Lemire, Gabrielle; D'Souza, Elston N; Dong, Shan; Ellingford, Jamie M; Adams, David R; Allan, Kirsten; Bakshi, Madhura; Baldwin, Erin E; Berger, Seth I; Bernstein, Jonathan A; Brown, Natasha J; Burrage, Lindsay C; Chapman, Kimberly; Compton, Alison G; Cunningham, Chloe A; D'Souza, Precilla; Délot, Emmanuèle C; Dias, Kerith-Rae; Elias, Ellen R; Evans, Carey-Anne; Ewans, Lisa; Ezell, Kimberly; Fraser, Jamie L; Gallacher, Lyndon; Genetti, Casie A; Grant, Christina L; Haack, Tobias; Kuechler, Alma; Lalani, Seema R; Leitão, Elsa; Fevre, Anna Le; Leventer, Richard J; Liebelt, Jan E; Lockhart, Paul J; Ma, Alan S; Macnamara, Ellen F; Maurer, Taylor M; Mendez, Hector R; Montgomery, Stephen B; Nassogne, Marie-Cécile; Neumann, Serena; O'Leary, Melanie; Palmer, Elizabeth E; Phillips, John; Pitsava, Georgia; Pysar, Ryan; Rehm, Heidi L; Reuter, Chloe M; Revencu, Nicole; Riess, Angelika; Rius, Rocio; Rodan, Lance; Roscioli, Tony; Rosenfeld, Jill A; Sachdev, Rani; Simons, Cas; Sisodiya, Sanjay M; Snell, Penny; Clair, Laura; Stark, Zornitza; Tan, Tiong Yang; Tan, Natalie B; Temple, Suzanna El; Thorburn, David R; Tifft, Cynthia J; Uebergang, Eloise; VanNoy, Grace E; Vilain, Eric; Viskochil, David H; Wedd, Laura; Wheeler, Matthew T; White, Susan M; Wojcik, Monica; Wolfe, Lynne A; Wolfenson, Zoe; Xiao, Changrui; Zocche, David; Rubenstein, John L; Markenscoff-Papadimitriou, Eirene; Fica, Sebastian M; Baralle, Diana; Depienne, Christel; MacArthur, Daniel G; Howson, Joanna Mm; Sanders, Stephan J; O'Donnell-Luria, Anne; Whiffin, Nicola	April 9, 2024	Not Determined
38634106	Create Study	Genome and clonal hematopoiesis stability contrasts with immune, cfDNA, mitochondrial, and telomere length changes during short duration spaceflight.	Precision clinical medicine	Garcia-Medina, J Sebastian; Sienkiewicz, Karolina; Narayanan, S Anand; Overbey, Eliah G; Grigorev, Kirill; Ryon, Krista A; Burke, Marissa; Proszynski, Jacqueline; Tierney, Braden; Schmidt, Caleb M; Mencia-Trinchant, Nuria; Klotz, Remi; Ortiz, Veronica; Foox, Jonathan; Chin, Christopher; Najjar, Deena; Matei, Irina; Chan, Irenaeus; Cruchaga, Carlos; Kleinman, Ashley; Kim, JangKeun; Lucaci, Alexander; Loy, Conor; Mzava, Omary; De Vlaminck, Iwijn; Singaraju, Anvita; Taylor, Lynn E; Schmidt, Julian C; Schmidt, Michael A; Blease, Kelly; Moreno, Juan; Boddicker, Andrew; Zhao, Junhua; Lajoie, Bryan; Altomare, Andrew; Kruglyak, Semyon; Levy, Shawn; Yu, Min; Hassane, Duane C; Bailey, Susan M; Bolton, Kelly; Mateus, Jaime; Mason, Christopher E	March 1, 2024	Not Determined
38589365	Create Study	The broad impact of cell death genes on the human disease phenome.	Cell death & disease	Rich, Abigail L; Lin, Phillip; Gamazon, Eric R; Zinkel, Sandra S	April 8, 2024	Not Determined
38585978	Create Study	Immediate-Early Genes as Influencers in Genetic Networks and their Role in Alzheimer''s Disease.	bioRxiv : the preprint server for biology	Zachariou, Margarita; Loizidou, Eleni M; Spyrou, George M	March 29, 2024	Not Determined
38570506	Create Study	Loss of CREBBP and KMT2D cooperate to accelerate lymphomagenesis and shape the lymphoma immune microenvironment.	Nature communications	Li, Jie; Chin, Christopher R; Ying, Hsia-Yuan; Meydan, Cem; Teater, Matthew R; Xia, Min; Farinha, Pedro; Takata, Katsuyoshi; Chu, Chi-Shuen; Jiang, Yiyue; Eagles, Jenna; Passerini, Verena; Tang, Zhanyun; Rivas, Martin A; Weigert, Oliver; Pugh, Trevor J; Chadburn, Amy; Steidl, Christian; Scott, David W; Roeder, Robert G; Mason, Christopher E; Zappasodi, Roberta; Béguelin, Wendy; Melnick, Ari M	April 3, 2024	Not Determined
38562832	Create Study	Validation of Enhancer Regions in Primary Human Neural Progenitor Cells using Capture STARR-seq.	bioRxiv : the preprint server for biology	Gaynor-Gillett, Sophia C; Cheng, Lijun; Shi, Manman; Liu, Jason; Wang, Gaoyuan; Spector, Megan; Flaherty, Mary; Wall, Martha; Hwang, Ahyeon; Gu, Mengting; Chen, Zhanlin; Chen, Yuhang; Consortium, PsychENCODE; Moran, Jennifer R; Zhang, Jing; Lee, Donghoon; Gerstein, Mark; Geschwind, Daniel; White, Kevin P	March 18, 2024	Not Determined
38562822	Create Study	Single-cell genomics and regulatory networks for 388 human brains.	bioRxiv : the preprint server for biology	Emani, Prashant S; Liu, Jason J; Clarke, Declan; Jensen, Matthew; Warrell, Jonathan; Gupta, Chirag; Meng, Ran; Lee, Che Yu; Xu, Siwei; Dursun, Cagatay; Lou, Shaoke; Chen, Yuhang; Chu, Zhiyuan; Galeev, Timur; Hwang, Ahyeon; Li, Yunyang; Ni, Pengyu; Zhou, Xiao; PsychENCODE Consortium; Bakken, Trygve E; Bendl, Jaroslav; Bicks, Lucy; Chatterjee, Tanima; Cheng, Lijun; Cheng, Yuyan; Dai, Yi; Duan, Ziheng; Flaherty, Mary; Fullard, John F; Gancz, Michael; Garrido-Martín, Diego; Gaynor-Gillett, Sophia; Grundman, Jennifer; Hawken, Natalie; Henry, Ella; Hoffman, Gabriel E; Huang, Ao; Jiang, Yunzhe; Jin, Ting; Jorstad, Nikolas L; Kawaguchi, Riki; Khullar, Saniya; Liu, Jianyin; Liu, Junhao; Liu, Shuang; Ma, Shaojie; Margolis, Michael; Mazariegos, Samantha; Moore, Jill; Moran, Jennifer R; Nguyen, Eric; Phalke, Nishigandha; Pjanic, Milos; Pratt, Henry; Quintero, Diana; Rajagopalan, Ananya S; Riesenmy, Tiernon R; Shedd, Nicole; Shi, Manman; Spector, Megan; Terwilliger, Rosemarie; Travaglini, Kyle J; Wamsley, Brie; Wang, Gaoyuan; Xia, Yan; Xiao, Shaohua; Yang, Andrew C; Zheng, Suchen; Gandal, Michael J; Lee, Donghoon; Lein, Ed S; Roussos, Panos; Sestan, Nenad; Weng, Zhiping; White, Kevin P; Won, Hyejung; Girgenti, Matthew J; Zhang, Jing; Wang, Daifeng; Geschwind, Daniel; Gerstein, Mark	March 30, 2024	Not Determined
38562756	Create Study	Prioritizing disease-related rare variants by integrating gene expression data.	bioRxiv : the preprint server for biology	Guo, Hanmin; Urban, Alexander Eckehart; Wong, Wing Hung	March 21, 2024	Not Determined
38562739	Create Study	Identifying associations of de novo noncoding variants with autism through integration of gene expression, sequence and sex information.	bioRxiv : the preprint server for biology	Li, Runjia; Ernst, Jason	March 21, 2024	Not Determined
38559190	Create Study	A systems-biology approach connects aging mechanisms with Alzheimer''s disease pathogenesis.	bioRxiv : the preprint server for biology	Leventhal, Matthew J; Zanella, Camila A; Kang, Byunguk; Peng, Jiajie; Gritsch, David; Liao, Zhixiang; Bukhari, Hassan; Wang, Tao; Pao, Ping-Chieh; Danquah, Serwah; Benetatos, Joseph; Nehme, Ralda; Farhi, Samouil; Tsai, Li-Huei; Dong, Xianjun; Scherzer, Clemens R; Feany, Mel B; Fraenkel, Ernest	March 17, 2024	Not Determined
38559085	Create Study	Functional associations of evolutionarily recent human genes exhibit sensitivity to the 3D genome landscape and disease.	bioRxiv : the preprint server for biology	Fleck, Katherine; Luria, Victor; Garag, Nitanta; Karger, Amir; Hunter, Trevor; Marten, Daniel; Phu, William; Nam, Kee-Myoung; Sestan, Nenad; O'Donnell-Luria, Anne H; Erceg, Jelena	March 17, 2024	Not Determined
38528004	Create Study	SKA2 regulated hyperactive secretory autophagy drives neuroinflammation-induced neurodegeneration.	Nature communications	Hartmann, Jakob; Bajaj, Thomas; Otten, Joy; Klengel, Claudia; Ebert, Tim; Gellner, Anne-Kathrin; Junglas, Ellen; Hafner, Kathrin; Anderzhanova, Elmira A; Tang, Fiona; Missig, Galen; Rexrode, Lindsay; Trussell, Daniel T; Li, Katelyn X; Pöhlmann, Max L; Mackert, Sarah; Geiger, Thomas M; Heinz, Daniel E; Lardenoije, Roy; Dedic, Nina; McCullough, Kenneth M; Próchnicki, Tomasz; Rhomberg, Thomas; Martinelli, Silvia; Payton, Antony; Robinson, Andrew C; Stein, Valentin; Latz, Eicke; Carlezon Jr, William A; Hausch, Felix; Schmidt, Mathias V; Murgatroyd, Chris; Berretta, Sabina; Klengel, Torsten; Pantazopoulos, Harry; Ressler, Kerry J; Gassen, Nils C	March 25, 2024	Not Determined
38510173	Create Study	VistoSeg: Processing utilities for high-resolution images for spatially resolved transcriptomics data.	Biological imaging	Tippani, Madhavi; Divecha, Heena R; Catallini 2nd, Joseph L; Kwon, Sang H; Weber, Lukas M; Spangler, Abby; Jaffe, Andrew E; Hyde, Thomas M; Kleinman, Joel E; Hicks, Stephanie C; Martinowich, Keri; Collado-Torres, Leonardo; Page, Stephanie C; Maynard, Kristen R	January 1, 2023	Not Determined
38487694	Create Study	Performant web-based interactive visualization tool for spatially-resolved transcriptomics experiments.	Biological imaging	Sriworarat, Chaichontat; Nguyen, Annie; Eagles, Nicholas J; Collado-Torres, Leonardo; Martinowich, Keri; Maynard, Kristen R; Hicks, Stephanie C	January 1, 2023	Not Determined
38405805	Create Study	Benchmark of cellular deconvolution methods using a multi-assay reference dataset from postmortem human prefrontal cortex.	bioRxiv : the preprint server for biology	Huuki-Myers, Louise A; Montgomery, Kelsey D; Kwon, Sang Ho; Cinquemani, Sophia; Eagles, Nicholas J; Gonzalez-Padilla, Daianna; Maden, Sean K; Kleinman, Joel E; Hyde, Thomas M; Hicks, Stephanie C; Maynard, Kristen R; Collado-Torres, Leonardo	April 7, 2024	Not Determined
38382530	Create Study	Thalamocortical organoids enable in vitro modeling of 22q11.2 microdeletion associated with neuropsychiatric disorders.	Cell stem cell	Shin, David; Kim, Chang N; Ross, Jayden; Hennick, Kelsey M; Wu, Sih-Rong; Paranjape, Neha; Leonard, Rachel; Wang, Jerrick C; Keefe, Matthew G; Pavlovic, Bryan J; Donohue, Kevin C; Moreau, Clara; Wigdor, Emilie M; Larson, H Hanh; Allen, Denise E; Cadwell, Cathryn R; Bhaduri, Aparna; Popova, Galina; Bearden, Carrie E; Pollen, Alex A; Jacquemont, Sebastien; Sanders, Stephan J; Haussler, David; Wiita, Arun P; Frost, Nicholas A; Sohal, Vikaas S; Nowakowski, Tomasz J	March 7, 2024	Not Determined
38370821	Create Study	Functional 3''-UTR Variants Identify Regulatory Mechanisms Impacting Alcohol Use Disorder and Related Traits.	bioRxiv : the preprint server for biology	Chen, Andy B; Yu, Xuhong; Thapa, Kriti S; Gao, Hongyu; Reiter, Jill L; Xuei, Xiaoling; Tsai, Andy P; Landreth, Gary E; Lai, Dongbing; Wang, Yue; Foroud, Tatiana M; Tischfield, Jay A; Edenberg, Howard J; Liu, Yunlong	February 5, 2024	Not Determined
38365907	Create Study	Characterization of enhancer activity in early human neurodevelopment using Massively Parallel Reporter Assay (MPRA) and forebrain organoids.	Scientific reports	Capauto, Davide; Wang, Yifan; Wu, Feinan; Norton, Scott; Mariani, Jessica; Inoue, Fumitaka; Crawford, Gregory E; Ahituv, Nadav; Abyzov, Alexej; Vaccarino, Flora M	February 16, 2024	Not Determined
38352580	Create Study	Spatial domain detection using contrastive self-supervised learning for spatial multi-omics technologies.	bioRxiv : the preprint server for biology	Yao, Jianing; Yu, Jinglun; Caffo, Brian; Page, Stephanie C; Martinowich, Keri; Hicks, Stephanie C	February 4, 2024	Not Determined
38321095	Create Study	Network-based drug repurposing for schizophrenia.	Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology	Truong, Trang T T; Liu, Zoe S J; Panizzutti, Bruna; Kim, Jee Hyun; Dean, Olivia M; Berk, Michael; Walder, Ken	May 1, 2024	Not Determined
38314955	Create Study	Transcriptome-Wide Association Studies (TWAS): Methodologies, Applications, and Challenges.	Current protocols	Evans, Patrick; Nagai, Taylor; Konkashbaev, Anuar; Zhou, Dan; Knapik, Ela W; Gamazon, Eric R	February 1, 2024	Not Determined
38266073	Create Study	The gene expression landscape of the human locus coeruleus revealed by single-nucleus and spatially-resolved transcriptomics.	eLife	Weber, Lukas M; Divecha, Heena R; Tran, Matthew N; Kwon, Sang Ho; Spangler, Abby; Montgomery, Kelsey D; Tippani, Madhavi; Bharadwaj, Rahul; Kleinman, Joel E; Page, Stephanie C; Hyde, Thomas M; Collado-Torres, Leonardo; Maynard, Kristen R; Martinowich, Keri; Hicks, Stephanie C	January 24, 2024	Not Determined
38260577	Create Study	Polygenic risk for schizophrenia converges on alternative polyadenylation as molecular mechanism underlying synaptic impairment.	bioRxiv : the preprint server for biology	Raabe, Florian J; Hausruckinger, Anna; Gagliardi, Miriam; Ahmad, Ruhel; Almeida, Valeria; Galinski, Sabrina; Hoffmann, Anke; Weigert, Liesa; Rummel, Christine K; Murek, Vanessa; Trastulla, Lucia; Jimenez-Barron, Laura; Atella, Alessia; Maidl, Susanne; Menegaz, Danusa; Hauger, Barbara; Wagner, Eva-Maria; Gabellini, Nadia; Kauschat, Beate; Riccardo, Sara; Cesana, Marcella; Papiol, Sergi; Sportelli, Vincenza; Rex-Haffner, Monika; Stolte, Sebastian J; Wehr, Michael C; Salcedo, Tatiana Oviedo; Papazova, Irina; Detera-Wadleigh, Sevilla; McMahon, Francis J; Schmitt, Andrea; Falkai, Peter; Hasan, Alkomiet; Cacchiarelli, Davide; Dannlowski, Udo; Nenadić, Igor; Kircher, Tilo; Scheuss, Volker; Eder, Matthias; Binder, Elisabeth B; Spengler, Dietmar; Rossner, Moritz J; Ziller, Michael J	January 13, 2024	Not Determined
38254182	Create Study	PICALO: principal interaction component analysis for the identification of discrete technical, cell-type, and environmental factors that mediate eQTLs.	Genome biology	Vochteloo, Martijn; Deelen, Patrick; Vink, Britt; BIOS Consortium; Tsai, Ellen A; Runz, Heiko; Andreu-Sánchez, Sergio; Fu, Jingyuan; Zhernakova, Alexandra; Westra, Harm-Jan; Franke, Lude	January 22, 2024	Not Determined
38212163	Create Study	Latent-state and model-based learning in PTSD.	Trends in neurosciences	Cisler, Josh M; Dunsmoor, Joseph E; Fonzo, Gregory A; Nemeroff, Charles B	February 1, 2024	Not Determined
38145985	Create Study	Convergence of the dysregulated regulome in schizophrenia with polygenic risk and evolutionarily constrained enhancers.	Molecular psychiatry	Dong, Pengfei; Voloudakis, Georgios; Fullard, John F; Hoffman, Gabriel E; Roussos, Panos	March 1, 2024	Not Determined
38107654	Create Study	escheR: unified multi-dimensional visualizations with Gestalt principles.	Bioinformatics advances	Guo, Boyi; Huuki-Myers, Louise A; Grant-Peters, Melissa; Collado-Torres, Leonardo; Hicks, Stephanie C	January 1, 2023	Not Determined
38055821	Create Study	Human-specific features and developmental dynamics of the brain N-glycome.	Science advances	Klarić, Thomas S; Gudelj, Ivan; Santpere, Gabriel; Novokmet, Mislav; Vučković, Frano; Ma, Shaojie; Doll, Hannah M; Risgaard, Ryan; Bathla, Shveta; Karger, Amir; Nairn, Angus C; Luria, Victor; Bečeheli, Ivona; Sherwood, Chet C; Ely, John J; Hof, Patrick R; Sousa, André M M; Josić, Djuro; Lauc, Gordan; Sestan, Nenad	December 8, 2023	Not Determined
38045413	Create Study	Spatiotemporal analysis of gene expression in the human dentate gyrus reveals age-associated changes in cellular maturation and neuroinflammation.	bioRxiv : the preprint server for biology	Ramnauth, Anthony D; Tippani, Madhavi; Divecha, Heena R; Papariello, Alexis R; Miller, Ryan A; Nelson, Erik D; Pattie, Elizabeth A; Kleinman, Joel E; Maynard, Kristen R; Collado-Torres, Leonardo; Hyde, Thomas M; Martinowich, Keri; Hicks, Stephanie C; Page, Stephanie C	May 6, 2024	Not Determined
38036788	Create Study	Isoform-level transcriptome-wide association uncovers genetic risk mechanisms for neuropsychiatric disorders in the human brain.	Nature genetics	Bhattacharya, Arjun; Vo, Daniel D; Jops, Connor; Kim, Minsoo; Wen, Cindy; Hervoso, Jonatan L; Pasaniuc, Bogdan; Gandal, Michael J	December 1, 2023	Not Determined
37985822	Create Study	Multi-ancestry genome-wide association study of cannabis use disorder yields insight into disease biology and public health implications.	Nature genetics	Levey, Daniel F; Galimberti, Marco; Deak, Joseph D; Wendt, Frank R; Bhattacharya, Arjun; Koller, Dora; Harrington, Kelly M; Quaden, Rachel; Johnson, Emma C; Gupta, Priya; Biradar, Mahantesh; Lam, Max; Cooke, Megan; Rajagopal, Veera M; Empke, Stefany L L; Zhou, Hang; Nunez, Yaira Z; Kranzler, Henry R; Edenberg, Howard J; Agrawal, Arpana; Smoller, Jordan W; Lencz, Todd; Hougaard, David M; Børglum, Anders D; Demontis, Ditte; Veterans Affairs Million Veteran Program; Gaziano, J Michael; Gandal, Michael J; Polimanti, Renato; Stein, Murray B; Gelernter, Joel	December 1, 2023	Not Determined
37961453	Create Study	Mapping the landscape of lineage-specific dynamic regulation of gene expression using single-cell transcriptomics and application to genetics of complex disease.	medRxiv : the preprint server for health sciences	Abe, Hanna; Lin, Phillip; Zhou, Dan; Ruderfer, Douglas M; Gamazon, Eric R	December 14, 2023	Not Determined
37961354	Create Study	AlphaMissense is better correlated with functional assays of missense impact than earlier prediction algorithms.	bioRxiv : the preprint server for biology	Ljungdahl, Alicia; Kohani, Sayeh; Page, Nicholas F; Wells, Eloise S; Wigdor, Emilie M; Dong, Shan; Sanders, Stephan J	October 27, 2023	Not Determined
37949069	Create Study	FMRP phosphorylation modulates neuronal translation through YTHDF1.	Molecular cell	Zou, Zhongyu; Wei, Jiangbo; Chen, Yantao; Kang, Yunhee; Shi, Hailing; Yang, Fan; Shi, Zhuoyue; Chen, Shijie; Zhou, Ying; Sepich-Poore, Caraline; Zhuang, Xiaoxi; Zhou, Xiaoming; Jiang, Hualiang; Wen, Zhexing; Jin, Peng; Luo, Cheng; He, Chuan	December 7, 2023	Not Determined
37932283	Create Study	Phylogenomics, phenotypic, and functional traits of five novel (Earth-derived) bacterial species isolated from the International Space Station and their prevalence in metagenomes.	Scientific reports	Simpson, Anna C; Sengupta, Pratyay; Zhang, Flora; Hameed, Asif; Parker, Ceth W; Singh, Nitin K; Miliotis, Georgios; Rekha, Punchappady D; Raman, Karthik; Mason, Christopher E; Venkateswaran, Kasthuri	November 6, 2023	Not Determined
37904203	Create Study	DeepGAMI: deep biologically guided auxiliary learning for multimodal integration and imputation to improve genotype-phenotype prediction.	Genome medicine	Chandrashekar, Pramod Bharadwaj; Alatkar, Sayali; Wang, Jiebiao; Hoffman, Gabriel E; He, Chenfeng; Jin, Ting; Khullar, Saniya; Bendl, Jaroslav; Fullard, John F; Roussos, Panos; Wang, Daifeng	October 31, 2023	Not Determined
37886514	Create Study	The neuronal chromatin landscape in adult schizophrenia brains is linked to early fetal development.	Research square	Girdhar, Kiran; Bendl, Jaroslav; Baumgartner, Andrew; Therrien, Karen; Venkatesh, Sanan; Mathur, Deepika; Dong, Pengfei; Rahman, Samir; Kleopoulos, Steven P; Misir, Ruth; Reach, Sarah M; Auluck, Pavan K; Marenco, Stefano; Lewis, David A; Haroutunian, Vahram; Funk, Cory; Voloudakis, Georgios; Hoffman, Gabriel E; Fullard, John F; Roussos, Panos	October 2, 2023	Not Determined
37886447	Create Study	Viral activation and ecological restructuring characterize a microbiome axis of spaceflight-associated immune activation.	Research square	Tierney, Braden T; Kim, JangKeun; Overbey, Eliah G; Ryon, Krista A; Foox, Jonathan; Sierra, Maria; Bhattacharya, Chandrima; Damle, Namita; Najjar, Deena; Park, Jiwoon; Garcia Medina, Sebastian; Houerbi, Nadia; Meydan, Cem; Wain Hershberg, Jeremy; Qiu, Jake; Kleinman, Ashley; Al Ghalith, Gabe; MacKay, Matthew; Afshin, Evan E; Dhir, Raja; Borg, Joseph; Gatt, Christine; Brereton, Nicholas; Readhead, Ben; Beyaz, Semir; Venkateswaran, Kasthuri J; Blease, Kelly; Moreno, Juan; Boddicker, Andrew; Zhao, Junhua; Lajoie, Bryan; Scott, Ryan T; Altomare, Andrew; Kruglyak, Semyon; Levy, Shawn; Church, George; Mason, Christopher E	October 10, 2023	Not Determined
37873320	Create Study	The neuronal chromatin landscape in adult schizophrenia brains is linked to early fetal development.	medRxiv : the preprint server for health sciences	Girdhar, Kiran; Bendl, Jaroslav; Baumgartner, Andrew; Therrien, Karen; Venkatesh, Sanan; Mathur, Deepika; Dong, Pengfei; Rahman, Samir; Kleopoulos, Steven P; Misir, Ruth; Reach, Sarah M; Auluck, Pavan K; Marenco, Stefano; Lewis, David A; Haroutunian, Vahram; Funk, Cory; Voloudakis, Georgios; Hoffman, Gabriel E; Fullard, John F; Roussos, Panos	October 3, 2023	Not Determined
37873195	Create Study	The impact of common variants on gene expression in the human brain: from RNA to protein to schizophrenia risk.	bioRxiv : the preprint server for biology	Liang, Qiuman; Jiang, Yi; Shieh, Annie W; Zhou, Dan; Chen, Rui; Wang, Feiran; Xu, Meng; Niu, Mingming; Wang, Xusheng; Pinto, Dalila; Wang, Yue; Cheng, Lijun; Vadukapuram, Ramu; Zhang, Chunling; Grennan, Kay; Giase, Gina; PsychENCODE Consortium; White, Kevin P; Peng, Junming; Li, Bingshan; Liu, Chunyu; Chen, Chao; Wang, Sidney H	November 10, 2023	Not Determined
37858340	Create Study	Abl2 repairs microtubules and phase separates with tubulin to promote microtubule nucleation.	Current biology : CB	Duan, Daisy; Lyu, Wanqing; Chai, Pengxin; Ma, Shaojie; Wu, Kuanlin; Wu, Chunxiang; Xiong, Yong; Sestan, Nenad; Zhang, Kai; Koleske, Anthony J	November 6, 2023	Not Determined
37848091	Create Study	Evaluating traumatic event scoring schemas for their predictive value to concurrent diagnostic profiles: Texas Childhood Trauma Research Network.	Journal of affective disorders	Aksan, Nazan; Guzick, Andrew G; Taylor, Leslie; Richmond, Robyn; Liberzon, Israel; Cross, Jeremyra; Garza, Cynthia; Rousseau, Justin; Shahidullah, Jeffrey D; Clark, Shaunna L; Rathouz, Paul J; Dodd, Cody G; Cisler, Josh; Newport, D Jeffrey; Wagner, Karen D; Nemeroff, Charles B	January 15, 2024	Not Determined
37831723	Create Study	Investigating trait variability of gene co-expression network architecture in brain by controlling for genomic risk of schizophrenia.	PLoS genetics	Radulescu, Eugenia; Chen, Qiang; Pergola, Giulio; Di Carlo, Pasquale; Han, Shizhong; Shin, Joo Heon; Hyde, Thomas M; Kleinman, Joel E; Weinberger, Daniel R	October 1, 2023	Not Determined
37824652	Create Study	Molecular programs of regional specification and neural stem cell fate progression in macaque telencephalon.	Science (New York, N.Y.)	Micali, Nicola; Ma, Shaojie; Li, Mingfeng; Kim, Suel-Kee; Mato-Blanco, Xoel; Sindhu, Suvimal Kumar; Arellano, Jon I; Gao, Tianliuyun; Shibata, Mikihito; Gobeske, Kevin T; Duque, Alvaro; Santpere, Gabriel; Sestan, Nenad; Rakic, Pasko	October 13, 2023	Not Determined
37824614	Create Study	Multi-omic profiling of the developing human cerebral cortex at the single-cell level.	Science advances	Zhu, Kaiyi; Bendl, Jaroslav; Rahman, Samir; Vicari, James M; Coleman, Claire; Clarence, Tereza; Latouche, Ovaun; Tsankova, Nadejda M; Li, Aiqun; Brennand, Kristen J; Lee, Donghoon; Yuan, Guo-Cheng; Fullard, John F; Roussos, Panos	October 13, 2023	Not Determined
37820724	Create Study	Species-specific FMRP regulation of RACK1 is critical for prenatal cortical development.	Neuron	Shen, Minjie; Sirois, Carissa L; Guo, Yu; Li, Meng; Dong, Qiping; Méndez-Albelo, Natasha M; Gao, Yu; Khullar, Saniya; Kissel, Lee; Sandoval, Soraya O; Wolkoff, Natalie E; Huang, Sabrina X; Xu, Zhiyan; Bryan, Jonathan E; Contractor, Amaya M; Korabelnikov, Tomer; Glass, Ian A; Doherty, Dan; Birth Defects Research Laboratory; Levine, Jon E; Sousa, André M M; Chang, Qiang; Bhattacharyya, Anita; Wang, Daifeng; Werling, Donna M; Zhao, Xinyu	December 20, 2023	Not Determined
37811875	Create Study	Lineage specific 3D genome structure in the adult human brain and neurodevelopmental changes in the chromatin interactome.	Nucleic acids research	Rahman, Samir; Dong, Pengfei; Apontes, Pasha; Fernando, Michael B; Kosoy, Roman; Townsley, Kayla G; Girdhar, Kiran; Bendl, Jaroslav; Shao, Zhiping; Misir, Ruth; Tsankova, Nadia; Kleopoulos, Steven P; Brennand, Kristen J; Fullard, John F; Roussos, Panos	November 10, 2023	Not Determined
37777856	Create Study	GWAS Meta-Analysis of Suicide Attempt: Identification of 12 Genome-Wide Significant Loci and Implication of Genetic Risks for Specific Health Factors.	The American journal of psychiatry	Docherty, Anna R; Mullins, Niamh; Ashley-Koch, Allison E; Qin, Xuejun; Coleman, Jonathan R I; Shabalin, Andrey; Kang, JooEun; Murnyak, Balasz; Wendt, Frank; Adams, Mark; Campos, Adrian I; DiBlasi, Emily; Fullerton, Janice M; Kranzler, Henry R; Bakian, Amanda V; Monson, Eric T; Rentería, Miguel E; Walss-Bass, Consuelo; Andreassen, Ole A; Behera, Chittaranjan; Bulik, Cynthia M; Edenberg, Howard J; Kessler, Ronald C; Mann, J John; Nurnberger Jr, John I; Pistis, Giorgio; Streit, Fabian; Ursano, Robert J; Polimanti, Renato; Dennis, Michelle; Garrett, Melanie; Hair, Lauren; Harvey, Philip; Hauser, Elizabeth R; Hauser, Michael A; Huffman, Jennifer; Jacobson, Daniel; Madduri, Ravi; McMahon, Benjamin; Oslin, David W; Trafton, Jodie; Awasthi, Swapnil; Berrettini, Wade H; Bohus, Martin; Chang, Xiao; Chen, Hsi-Chung; Chen, Wei J; Christensen, Erik D; Crow, Scott; Duriez, Philibert; Edwards, Alexis C; Fernández-Aranda, Fernando; Galfalvy, Hanga; Gandal, Michael; Gorwood, Philip; Guo, Yiran; Hafferty, Jonathan D; Hakonarson, Hakon; Halmi, Katherine A; Hishimoto, Akitoyo; Jain, Sonia; Jamain, Stéphane; Jiménez-Murcia, Susana; Johnson, Craig; Kaplan, Allan S; Kaye, Walter H; Keel, Pamela K; Kennedy, James L; Kim, Minsoo; Klump, Kelly L; Levey, Daniel F; Li, Dong; Liao, Shih-Cheng; Lieb, Klaus; Lilenfeld, Lisa; Marshall, Christian R; Mitchell, James E; Okazaki, Satoshi; Otsuka, Ikuo; Pinto, Dalila; Powers, Abigail; Ramoz, Nicolas; Ripke, Stephan; Roepke, Stefan; Rozanov, Vsevolod; Scherer, Stephen W; Schmahl, Christian; Sokolowski, Marcus; Starnawska, Anna; Strober, Michael; Su, Mei-Hsin; Thornton, Laura M; Treasure, Janet; Ware, Erin B; Watson, Hunna J; Witt, Stephanie H; Woodside, D Blake; Yilmaz, Zeynep; Zillich, Lea; Adolfsson, Rolf; Agartz, Ingrid; Alda, Martin; Alfredsson, Lars; Appadurai, Vivek; Artigas, María Soler; Van der Auwera, Sandra; Azevedo, M Helena; Bass, Nicholas; Bau, Claiton H D; Baune, Bernhard T; Bellivier, Frank; Berger, Klaus; Biernacka, Joanna M; Bigdeli, Tim B; Binder, Elisabeth B; Boehnke, Michael; Boks, Marco P; Braff, David L; Bryant, Richard; Budde, Monika; Byrne, Enda M; Cahn, Wiepke; Castelao, Enrique; Cervilla, Jorge A; Chaumette, Boris; Corvin, Aiden; Craddock, Nicholas; Djurovic, Srdjan; Foo, Jerome C; Forstner, Andreas J; Frye, Mark; Gatt, Justine M; Giegling, Ina; Grabe, Hans J; Green, Melissa J; Grevet, Eugenio H; Grigoroiu-Serbanescu, Maria; Gutierrez, Blanca; Guzman-Parra, Jose; Hamshere, Marian L; Hartmann, Annette M; Hauser, Joanna; Heilmann-Heimbach, Stefanie; Hoffmann, Per; Ising, Marcus; Jones, Ian; Jones, Lisa A; Jonsson, Lina; Kahn, René S; Kelsoe, John R; Kendler, Kenneth S; Kloiber, Stefan; Koenen, Karestan C; Kogevinas, Manolis; Krebs, Marie-Odile; Landén, Mikael; Leboyer, Marion; Lee, Phil H; Levinson, Douglas F; Liao, Calwing; Lissowska, Jolanta; Mayoral, Fermin; McElroy, Susan L; McGrath, Patrick; McGuffin, Peter; McQuillin, Andrew; Mehta, Divya; Melle, Ingrid; Mitchell, Philip B; Molina, Esther; Morken, Gunnar; Nievergelt, Caroline; Nöthen, Markus M; O'Donovan, Michael C; Ophoff, Roel A; Owen, Michael J; Pato, Carlos; Pato, Michele T; Penninx, Brenda W J H; Potash, James B; Power, Robert A; Preisig, Martin; Quested, Digby; Ramos-Quiroga, Josep Antoni; Reif, Andreas; Ribasés, Marta; Richarte, Vanesa; Rietschel, Marcella; Rivera, Margarita; Roberts, Andrea; Roberts, Gloria; Rouleau, Guy A; Rovaris, Diego L; Sanders, Alan R; Schofield, Peter R; Schulze, Thomas G; Scott, Laura J; Serretti, Alessandro; Shi, Jianxin; Sirignano, Lea; Sklar, Pamela; Smeland, Olav B; Smoller, Jordan W; Sonuga-Barke, Edmund (see original citation for additional authors)	October 1, 2023	Not Determined
37771758	Create Study	Hypergraph factorization for multi-tissue gene expression imputation.	Nature machine intelligence	Viñas, Ramon; Joshi, Chaitanya K; Georgiev, Dobrik; Lin, Phillip; Dumitrascu, Bianca; Gamazon, Eric R; Liò, Pietro	July 1, 2023	Not Determined
37745891	Create Study	Dimensional clinical phenotyping using post-mortem brain donor medical records: post-mortem RDoC profiling is associated with Alzheimer''s disease neuropathology.	Alzheimer''s & dementia (Amsterdam, Netherlands)	Vogelgsang, Jonathan; Dan, Shu; Lally, Anna P; Chatigny, Michael; Vempati, Sangeetha; Abston, Joshua; Durning, Peter T; Oakley, Derek H; McCoy, Thomas H; Klengel, Torsten; Berretta, Sabina	January 1, 2023	Not Determined
37745552	Create Study	Systematic identification of disease-causing promoter and untranslated region variants in 8,040 undiagnosed individuals with rare disease.	medRxiv : the preprint server for health sciences	Martin-Geary, Alexandra C; Blakes, Alexander J M; Dawes, Ruebena; Findlay, Scott D; Lord, Jenny; Walker, Susan; Talbot-Martin, Jonathan; Wieder, Nechama; D'Souza, Elston N; Fernandes, Maria; Hilton, Sarah; Lahiri, Nayana; Campbell, Christopher; Jenkinson, Sarah; DeGoede, Christian G E L; Anderson, Emily R; Burge, Christopher B; Sanders, Stephan J; Ellingford, Jamie; Baralle, Diana; Banka, Siddharth; Whiffin, Nicola	September 12, 2023	Not Determined
37715107	Create Study	Decreased CNNM2 expression in prefrontal cortex affects sensorimotor gating function, cognition, dendritic spine morphogenesis and risk of schizophrenia.	Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology	Zhou, Dan-Yang; Su, Xi; Wu, Yong; Yang, Yongfeng; Zhang, Luwen; Cheng, Shumin; Shao, Minglong; Li, Wenqiang; Zhang, Zhaohui; Wang, Lu; Lv, Luxian; Li, Ming; Song, Meng	January 1, 2024	Not Determined
37714849	Create Study	Divergent single cell transcriptome and epigenome alterations in ALS and FTD patients with C9orf72 mutation.	Nature communications	Li, Junhao; Jaiswal, Manoj K; Chien, Jo-Fan; Kozlenkov, Alexey; Jung, Jinyoung; Zhou, Ping; Gardashli, Mahammad; Pregent, Luc J; Engelberg-Cook, Erica; Dickson, Dennis W; Belzil, Veronique V; Mukamel, Eran A; Dracheva, Stella	September 15, 2023	Not Determined
37714797	Create Study	Neuropsychiatric biomarker discovery: go big or go home.	Trends in molecular medicine	Ljungdahl, Alicia; Sanders, Stephan J	November 1, 2023	Not Determined
37712493	Create Study	Novel method of isolating nuclei of human oligodendrocyte precursor cells reveals substantial developmental changes in gene expression and H3K27ac histone modification.	Glia	Kozlenkov, Alexey; Vadukapuram, Ramu; Zhou, Ping; Fam, Peter; Wegner, Michael; Dracheva, Stella	January 1, 2024	Not Determined
37696874	Create Study	A higher dysregulation burden of brain DNA methylation in female patients implicated in the sex bias of Schizophrenia.	Molecular psychiatry	Zhou, Jiaqi; Xia, Yan; Li, Miao; Chen, Yu; Dai, Jiacheng; Liu, Chunyu; Chen, Chao	November 1, 2023	Not Determined
37645832	Create Study	Characterization of enhancer activity in early human neurodevelopment using Massively parallel reporter assay (MPRA) and forebrain organoids.	bioRxiv : the preprint server for biology	Capauto, Davide; Wang, Yifan; Wu, Feinan; Norton, Scott; Mariani, Jessica; Inoue, Fumitaka; Crawford, Gregory E; PsychENCODE Consortium; Ahituv, Nadav; Abyzov, Alexej; Vaccarino, Flora M	August 14, 2023	Not Determined
37620341	Create Study	Human forebrain organoid-based multi-omics analyses of PCCB as a schizophrenia associated gene linked to GABAergic pathways.	Nature communications	Zhang, Wendiao; Zhang, Ming; Xu, Zhenhong; Yan, Hongye; Wang, Huimin; Jiang, Jiamei; Wan, Juan; Tang, Beisha; Liu, Chunyu; Chen, Chao; Meng, Qingtuan	August 24, 2023	Not Determined
37592024	Create Study	Genetic insights into human cortical organization and development through genome-wide analyses of 2,347 neuroimaging phenotypes.	Nature genetics	Warrier, Varun; Stauffer, Eva-Maria; Huang, Qin Qin; Wigdor, Emilie M; Slob, Eric A W; Seidlitz, Jakob; Ronan, Lisa; Valk, Sofie L; Mallard, Travis T; Grotzinger, Andrew D; Romero-Garcia, Rafael; Baron-Cohen, Simon; Geschwind, Daniel H; Lancaster, Madeline A; Murray, Graham K; Gandal, Michael J; Alexander-Bloch, Aaron; Won, Hyejung; Martin, Hilary C; Bullmore, Edward T; Bethlehem, Richard A I	September 1, 2023	Not Determined
37580460	Create Study	Unraveling the cell-type-specific molecular pathways of PTSD: integrating GWAS with brain genomic profiling and in vitro modeling.	Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology	Iatrou, Artemis; Daskalakis, Nikolaos P	January 1, 2024	Not Determined
37550530	Create Study	Genome-wide analysis of a model-derived binge eating disorder phenotype identifies risk loci and implicates iron metabolism.	Nature genetics	Burstein, David; Griffen, Trevor C; Therrien, Karen; Bendl, Jaroslav; Venkatesh, Sanan; Dong, Pengfei; Modabbernia, Amirhossein; Zeng, Biao; Mathur, Deepika; Hoffman, Gabriel; Sysko, Robyn; Hildebrandt, Tom; Voloudakis, Georgios; Roussos, Panos	September 1, 2023	Not Determined
37546856	Create Study	Dopaminoceptive D1 and D2 neurons in ventral hippocampus arbitrate approach and avoidance in anxiety.	bioRxiv : the preprint server for biology	Godino, Arthur; Salery, Marine; Minier-Toribio, Angelica M; Patel, Vishwendra; Fullard, John F; Parise, Eric M; Martinez-Rivera, Freddyson J; Morel, Carole; Roussos, Panos; Blitzer, Robert D; Nestler, Eric J	July 28, 2023	Not Determined
37546804	Create Study	MicroRNA-Mediated Obstruction of Stem-loop Alternative Splicing (MIMOSAS): a global mechanism for the regulation of alternative splicing.	Research square	Zhai, Rong; Ruan, Kai; Perez, German Farinas; Kubat, Miroslav; Liu, Jiaqi; Hofacker, Ivo; Wuchty, Stefan	July 28, 2023	Not Determined
37515770	Create Study	The stability of the myelinating oligodendrocyte transcriptome is regulated by the nuclear lamina.	Cell reports	Pruvost, Mathilde; Patzig, Julia; Yattah, Camila; Selcen, Ipek; Hernandez, Marylens; Park, Hye-Jin; Moyon, Sarah; Liu, Shibo; Morioka, Malia S; Shopland, Lindsay; Al-Dalahmah, Osama; Bendl, Jaroslav; Fullard, John F; Roussos, Panos; Goldman, James; He, Ye; Dupree, Jeffrey L; Casaccia, Patrizia	August 29, 2023	Not Determined
37503149	Create Study	R-loop landscapes in the developing human brain are linked to neural differentiation and cell-type specific transcription.	bioRxiv : the preprint server for biology	LaMarca, Elizabeth A; Saito, Atsushi; Plaza-Jennings, Amara; Espeso-Gil, Sergio; Hellmich, Allyse; Fernando, Michael B; Javidfar, Behnam; Liao, Will; Estill, Molly; Townsley, Kayla; Florio, Anna; Ethridge, James E; Do, Catherine; Tycko, Benjamin; Shen, Li; Kamiya, Atsushi; Tsankova, Nadejda M; Brennand, Kristen J; Akbarian, Schahram	July 18, 2023	Not Determined
37502907	Create Study	Schizophrenia Risk Mapping and Functional Engineering of the 3D Genome in Three Neuronal Subtypes.	bioRxiv : the preprint server for biology	Powell, Samuel K; Liao, Will; O'Shea, Callan; Kammourh, Sarah; Ghorbani, Sadaf; Rigat, Raymond; Elahi, Rahat; Deans, Pj Michael; Le, Derek J; Agarwal, Poonam; Seow, Wei Qiang; Wang, Kevin C; Akbarian, Schahram; Brennand, Kristen J	July 19, 2023	Not Determined
37491937	Create Study	Single-Nucleus Transcriptome Profiling of Dorsolateral Prefrontal Cortex: Mechanistic Roles for Neuronal Gene Expression, Including the 17q21.31 Locus, in PTSD Stress Response.	The American journal of psychiatry	Chatzinakos, Chris; Pernia, Cameron D; Morrison, Filomene G; Iatrou, Artemis; McCullough, Kenneth M; Schuler, Heike; Snijders, Clara; Bajaj, Thomas; DiPietro, Christopher P; Soliva Estruch, Marina; Gassen, Nils C; Anastasopoulos, Constantin; Bharadwaj, Rahul A; Bowlby, Benjamin C; Hartmann, Jakob; Maihofer, Adam X; Nievergelt, Caroline M; Ressler, Nicholas M; Wolf, Erika J; Traumatic Stress Brain Research Group; PTSD BrainOmics Project of the PsychENCODE Consortium; PTSD Working Group of the Psychiatric Genomics Consortium; Carlezon Jr, William A; Krystal, John H; Kleinman, Joel E; Girgenti, Matthew J; Huber, Bertrand R; Kellis, Manolis; Logue, Mark W; Miller, Mark W; Ressler, Kerry J; Daskalakis, Nikolaos P	October 1, 2023	Not Determined
37464041	Create Study	Depression pathophysiology, risk prediction of recurrence and comorbid psychiatric disorders using genome-wide analyses.	Nature medicine	Als, Thomas D; Kurki, Mitja I; Grove, Jakob; Voloudakis, Georgios; Therrien, Karen; Tasanko, Elisa; Nielsen, Trine Tollerup; Naamanka, Joonas; Veerapen, Kumar; Levey, Daniel F; Bendl, Jaroslav; Bybjerg-Grauholm, Jonas; Zeng, Biao; Demontis, Ditte; Rosengren, Anders; Athanasiadis, Georgios; Bækved-Hansen, Marie; Qvist, Per; Bragi Walters, G; Thorgeirsson, Thorgeir; Stefánsson, Hreinn; Musliner, Katherine L; Rajagopal, Veera M; Farajzadeh, Leila; Thirstrup, Janne; Vilhjálmsson, Bjarni J; McGrath, John J; Mattheisen, Manuel; Meier, Sandra; Agerbo, Esben; Stefánsson, Kári; Nordentoft, Merete; Werge, Thomas; Hougaard, David M; Mortensen, Preben B; Stein, Murray B; Gelernter, Joel; Hovatta, Iiris; Roussos, Panos; Daly, Mark J; Mors, Ole; Palotie, Aarno; Børglum, Anders D	July 1, 2023	Not Determined
37461605	Create Study	Phylogenetic affiliations and genomic characterization of novel bacterial species and their abundance in the International Space Station.	Research square	Simpson, Anna C; Sengupta, Pratyay; Zhang, Flora; Hameed, Asif; Parker, Ceth W; Singh, Nitin K; Miliotis, Georgios; Rekha, Punchappady D; Raman, Karthik; Mason, Christopher E; Venkateswaran, Kasthuri	July 6, 2023	Not Determined
37454787	Create Study	Activity-Dependent Transcriptional Program in NGN2+ Neurons Enriched for Genetic Risk for Brain-Related Disorders.	Biological psychiatry	Ma, Yixuan; Bendl, Jaroslav; Hartley, Brigham J; Fullard, John F; Abdelaal, Rawan; Ho, Seok-Man; Kosoy, Roman; Gochman, Peter; Rapoport, Judith; Hoffman, Gabriel E; Brennand, Kristen J; Roussos, Panos	January 15, 2024	Not Determined
37451263	Create Study	Improvement of sensory deficits in fragile X mice by increasing cortical interneuron activity after the critical period.	Neuron	Kourdougli, Nazim; Suresh, Anand; Liu, Benjamin; Juarez, Pablo; Lin, Ashley; Chung, David T; Graven Sams, Anette; Gandal, Michael J; Martínez-Cerdeño, Verónica; Buonomano, Dean V; Hall, Benjamin J; Mombereau, Cédric; Portera-Cailliau, Carlos	September 20, 2023	Not Determined
37429865	Create Study	nnSVG for the scalable identification of spatially variable genes using nearest-neighbor Gaussian processes.	Nature communications	Weber, Lukas M; Saha, Arkajyoti; Datta, Abhirup; Hansen, Kasper D; Hicks, Stephanie C	July 10, 2023	Not Determined
37425902	Create Study	Cell type and condition specific functional annotation of schizophrenia associated non-coding genetic variants.	bioRxiv : the preprint server for biology	Rummel, Christine K; Gagliardi, Miriam; Herholt, Alexander; Ahmad, Ruhel; Murek, Vanessa; Weigert, Liesa; Hausruckinger, Anna; Maidl, Susanne; Jimenez-Barron, Laura; Trastulla, Lucia; Eder, Mathias; Rossner, Moritz; Ziller, Michael J	June 27, 2023	Not Determined
37398182	Create Study	The broad impact of cell death genes on the human disease phenome.	medRxiv : the preprint server for health sciences	Rich, Abigail; Lin, Phillip; Gamazon, Eric; Zinkel, Sandra	June 12, 2023	Not Determined
37398170	Create Study	Minimum entropy framework identifies a novel class of genomic functional elements and reveals regulatory mechanisms at human disease loci.	bioRxiv : the preprint server for biology	Betti, Michael J; Aldrich, Melinda C; Gamazon, Eric R	December 12, 2023	Not Determined
37398070	Create Study	Genetic mechanisms for impaired synaptic plasticity in schizophrenia revealed by computational modelling.	bioRxiv : the preprint server for biology	Mäki-Marttunen, Tuomo; Blackwell, Kim T; Akkouh, Ibrahim; Shadrin, Alexey; Valstad, Mathias; Elvsåshagen, Tobjørn; Linne, Marja-Leena; Djurovic, Srdjan; Einevoll, Gaute T; Andreassen, Ole A	June 14, 2023	Not Determined
37366052	Create Study	Pleiotropy of autism-associated chromatin regulators.	Development (Cambridge, England)	Lasser, Micaela; Sun, Nawei; Xu, Yuxiao; Wang, Sheng; Drake, Sam; Law, Karen; Gonzalez, Silvano; Wang, Belinda; Drury, Vanessa; Castillo, Octavio; Zaltsman, Yefim; Dea, Jeanselle; Bader, Ethel; McCluskey, Kate E; State, Matthew W; Willsey, A Jeremy; Willsey, Helen Rankin	July 15, 2023	Not Determined
37365192	Create Study	Elevated levels of FMRP-target MAP1B impair human and mouse neuronal development and mouse social behaviors via autophagy pathway.	Nature communications	Guo, Yu; Shen, Minjie; Dong, Qiping; Méndez-Albelo, Natasha M; Huang, Sabrina X; Sirois, Carissa L; Le, Jonathan; Li, Meng; Jarzembowski, Ezra D; Schoeller, Keegan A; Stockton, Michael E; Horner, Vanessa L; Sousa, André M M; Gao, Yu; Birth Defects Research Laboratory; Levine, Jon E; Wang, Daifeng; Chang, Qiang; Zhao, Xinyu	June 26, 2023	Not Determined
37270547	Create Study	Balanced SET levels favor the correct enhancer repertoire during cell fate acquisition.	Nature communications	Zaghi, Mattia; Banfi, Federica; Massimino, Luca; Volpin, Monica; Bellini, Edoardo; Brusco, Simone; Merelli, Ivan; Barone, Cristiana; Bruni, Michela; Bossini, Linda; Lamparelli, Luigi Antonio; Pintado, Laura; D'Aliberti, Deborah; Spinelli, Silvia; Mologni, Luca; Colasante, Gaia; Ungaro, Federica; Cioni, Jean-Michel; Azzoni, Emanuele; Piazza, Rocco; Montini, Eugenio; Broccoli, Vania; Sessa, Alessandro	June 3, 2023	Not Determined
37214898	Create Study	Distinct genetic liability profiles define clinically relevant patient strata across common diseases.	medRxiv : the preprint server for health sciences	Trastulla, Lucia; Moser, Sylvain; Jiménez-Barrón, Laura T; Andlauer, Till F M; von Scheidt, Moritz; Schizophrenia Working Group of the Psychiatric Genomics Consortium; Budde, Monika; Heilbronner, Urs; Papiol, Sergi; Teumer, Alexander; Homuth, Georg; Falkai, Peter; Völzke, Henry; Dörr, Marcus; Schulze, Thomas G; Gagneur, Julien; Iorio, Francesco; Müller-Myhsok, Bertram; Schunkert, Heribert; Ziller, Michael J	May 11, 2023	Not Determined
37205403	Create Study	Collection of Biospecimens from the Inspiration4 Mission Establishes the Standards for the Space Omics and Medical Atlas (SOMA).	bioRxiv : the preprint server for biology	Overbey, Eliah G; Ryon, Krista; Kim, JangKeun; Tierney, Braden; Klotz, Remi; Ortiz, Veronica; Mullane, Sean; Schmidt, Julian C; MacKay, Matthew; Damle, Namita; Najjar, Deena; Matei, Irina; Patras, Laura; Medina, J Sebastian Garcia; Kleinman, Ashley; Hirschberg, Jeremy Wain; Proszynski, Jacqueline; Narayanan, S Anand; Schmidt, Caleb M; Afshin, Evan E; Innes, Lucinda; Saldarriaga, Mateo Mejia; Schmidt, Michael A; Granstein, Richard D; Shirah, Bader; Yu, Min; Lyden, David; Mateus, Jaime; Mason, Christopher E	May 2, 2023	Not Determined
37205394	Create Study	ZBTB7A regulates MDD-specific chromatin signatures and astrocyte-mediated stress vulnerability in orbitofrontal cortex.	bioRxiv : the preprint server for biology	Fulton, Sasha L; Bendl, Jaroslav; Gameiro-Ros, Isabel; Fullard, John F; Al-Kachak, Amni; Lepack, Ashley E; Stewart, Andrew F; Singh, Sumnima; Poller, Wolfram C; Bastle, Ryan M; Hauberg, Mads E; Fakira, Amanda K; Chen, Min; Cuttoli, Romain Durand-de; Cathomas, Flurin; Ramakrishnan, Aarthi; Gleason, Kelly; Shen, Li; Tamminga, Carol A; Milosevic, Ana; Russo, Scott J; Swirski, Filip; Blitzer, Robert D; Slesinger, Paul A; Roussos, Panos; Maze, Ian	May 4, 2023	Not Determined
37197740	Create Study	Gradient-based sparse principal component analysis with extensions to online learning.	Biometrika	Qiu, Yixuan; Lei, Jing; Roeder, Kathryn	June 1, 2023	Not Determined
37188697	Create Study	Prioritization of potential causative genes for schizophrenia in placenta.	Nature communications	Ursini, Gianluca; Di Carlo, Pasquale; Mukherjee, Sreya; Chen, Qiang; Han, Shizhong; Kim, Jiyoung; Deyssenroth, Maya; Marsit, Carmen J; Chen, Jia; Hao, Ke; Punzi, Giovanna; Weinberger, Daniel R	May 15, 2023	Not Determined
37104612	Create Study	Leveraging base-pair mammalian constraint to understand genetic variation and human disease.	Science (New York, N.Y.)	Sullivan, Patrick F; Meadows, Jennifer R S; Gazal, Steven; Phan, BaDoi N; Li, Xue; Genereux, Diane P; Dong, Michael X; Bianchi, Matteo; Andrews, Gregory; Sakthikumar, Sharadha; Nordin, Jessika; Roy, Ananya; Christmas, Matthew J; Marinescu, Voichita D; Wang, Chao; Wallerman, Ola; Xue, James; Yao, Shuyang; Sun, Quan; Szatkiewicz, Jin; Wen, Jia; Huckins, Laura M; Lawler, Alyssa; Keough, Kathleen C; Zheng, Zhili; Zeng, Jian; Wray, Naomi R; Li, Yun; Johnson, Jessica; Chen, Jiawen; Zoonomia Consortium§; Paten, Benedict; Reilly, Steven K; Hughes, Graham M; Weng, Zhiping; Pollard, Katherine S; Pfenning, Andreas R; Forsberg-Nilsson, Karin; Karlsson, Elinor K; Lindblad-Toh, Kerstin	April 28, 2023	Not Determined
37104607	Create Study	Three-dimensional genome rewiring in loci with human accelerated regions.	Science (New York, N.Y.)	Keough, Kathleen C; Whalen, Sean; Inoue, Fumitaka; Przytycki, Pawel F; Fair, Tyler; Deng, Chengyu; Steyert, Marilyn; Ryu, Hane; Lindblad-Toh, Kerstin; Karlsson, Elinor; Zoonomia Consortium§; Nowakowski, Tomasz; Ahituv, Nadav; Pollen, Alex; Pollard, Katherine S	April 28, 2023	Not Determined
37090548	Create Study	Genetic regulation of cell-type specific chromatin accessibility shapes the etiology of brain diseases.	bioRxiv : the preprint server for biology	Zeng, Biao; Bendl, Jaroslav; Deng, Chengyu; Lee, Donghoon; Misir, Ruth; Reach, Sarah M; Kleopoulos, Steven P; Auluck, Pavan; Marenco, Stefano; Lewis, David A; Haroutunian, Vahram; Ahituv, Nadav; Fullard, John F; Hoffman, Gabriel E; Roussos, Panos	March 2, 2023	Not Determined
37034773	Create Study	Human forebrain organoids-based multi-omics analyses reveal PCCB''s regulation on GABAergic system contributing to schizophrenia.	Research square	Zhang, Wendiao; Zhang, Ming; Xu, Zhenhong; Yan, Hongye; Wang, Huimin; Jiang, Jiamei; Wan, Juan; Tang, Beisha; Liu, Chunyu; Chen, Chao; Meng, Qingtuan	March 29, 2023	Not Determined
37034704	Create Study	Multiplex, single-cell CRISPRa screening for cell type specific regulatory elements.	bioRxiv : the preprint server for biology	Chardon, Florence M; McDiarmid, Troy A; Page, Nicholas F; Daza, Riza M; Martin, Beth; Domcke, Silvia; Regalado, Samuel G; Lalanne, Jean-Benoît; Calderon, Diego; Li, Xiaoyi; Starita, Lea M; Sanders, Stephan J; Ahituv, Nadav; Shendure, Jay	April 30, 2024	Not Determined
36993743	Create Study	Evaluating performance and applications of sample-wise cell deconvolution methods on human brain transcriptomic data.	bioRxiv : the preprint server for biology	Dai, Rujia; Chu, Tianyao; Zhang, Ming; Wang, Xuan; Jourdon, Alexandre; Wu, Feinan; Mariani, Jessica; Vaccarino, Flora M; Lee, Donghoon; Fullard, John F; Hoffman, Gabriel E; Roussos, Panos; Wang, Yue; Wang, Xusheng; Pinto, Dalila; Wang, Sidney H; Zhang, Chunling; PsychENCODE consortium; Chen, Chao; Liu, Chunyu	March 15, 2023	Not Determined
36993732	Create Study	escheR: Unified multi-dimensional visualizations with Gestalt principles.	bioRxiv : the preprint server for biology	Guo, Boyi; Huuki-Myers, Louise A; Grant-Peters, Melissa; Collado-Torres, Leonardo; Hicks, Stephanie C	June 8, 2023	Not Determined
36993726	Create Study	Developmental isoform diversity in the human neocortex informs neuropsychiatric risk mechanisms.	bioRxiv : the preprint server for biology	Patowary, Ashok; Zhang, Pan; Jops, Connor; Vuong, Celine K; Ge, Xinzhu; Hou, Kangcheng; Kim, Minsoo; Gong, Naihua; Margolis, Michael; Vo, Daniel; Wang, Xusheng; Liu, Chunyu; Pasaniuc, Bogdan; Li, Jingyi Jessica; Gandal, Michael J; de la Torre-Ubieta, Luis	October 11, 2023	Not Determined
36993467	Create Study	A Transcriptomic Atlas of the Human Brain Reveals Genetically Determined Aspects of Neuropsychiatric Health.	medRxiv : the preprint server for health sciences	Bledsoe, Xavier; Gamazon, Eric R	June 4, 2023	Not Determined
36991491	Create Study	Holobiont Urbanism: sampling urban beehives reveals cities'' metagenomes.	Environmental microbiome	Hénaff, Elizabeth; Najjar, Devora; Perez, Miguel; Flores, Regina; Woebken, Christopher; Mason, Christopher E; Slavin, Kevin	March 30, 2023	Not Determined
36945630	Create Study	Cross-ancestry, cell-type-informed atlas of gene, isoform, and splicing regulation in the developing human brain.	medRxiv : the preprint server for health sciences	Wen, Cindy; Margolis, Michael; Dai, Rujia; Zhang, Pan; Przytycki, Pawel F; Vo, Daniel D; Bhattacharya, Arjun; Matoba, Nana; Jiao, Chuan; Kim, Minsoo; Tsai, Ellen; Hoh, Celine; Aygün, Nil; Walker, Rebecca L; Chatzinakos, Christos; Clarke, Declan; Pratt, Henry; Consortium, PsychENCODE; Peters, Mette A; Gerstein, Mark; Daskalakis, Nikolaos P; Weng, Zhiping; Jaffe, Andrew E; Kleinman, Joel E; Hyde, Thomas M; Weinberger, Daniel R; Bray, Nicholas J; Sestan, Nenad; Geschwind, Daniel H; Roeder, Kathryn; Gusev, Alexander; Pasaniuc, Bogdan; Stein, Jason L; Love, Michael I; Pollard, Katherine S; Liu, Chunyu; Gandal, Michael J	March 6, 2023	Not Determined
36945512	Create Study	Leveraging Base Pair Mammalian Constraint to Understand Genetic Variation and Human Disease.	bioRxiv : the preprint server for biology	Sullivan, Patrick F; Meadows, Jennifer R S; Gazal, Steven; Phan, BaDoi N; Li, Xue; Genereux, Diane P; Dong, Michael X; Bianchi, Matteo; Andrews, Gregory; Sakthikumar, Sharadha; Nordin, Jessika; Roy, Ananya; Christmas, Matthew J; Marinescu, Voichita D; Wallerman, Ola; Xue, James R; Li, Yun; Yao, Shuyang; Sun, Quan; Szatkiewicz, Jin; Wen, Jia; Huckins, Laura M; Lawler, Alyssa J; Keough, Kathleen C; Zheng, Zhili; Zeng, Jian; Wray, Naomi R; Johnson, Jessica; Chen, Jiawen; Zoonomia Consortium; Paten, Benedict; Reilly, Steven K; Hughes, Graham M; Weng, Zhiping; Pollard, Katherine S; Pfenning, Andreas R; Forsberg-Nilsson, Karin; Karlsson, Elinor K; Lindblad-Toh, Kerstin	March 10, 2023	Not Determined
36936070	Create Study	BOMA, a machine-learning framework for comparative gene expression analysis across brains and organoids.	Cell reports methods	He, Chenfeng; Kalafut, Noah Cohen; Sandoval, Soraya O; Risgaard, Ryan; Sirois, Carissa L; Yang, Chen; Khullar, Saniya; Suzuki, Marin; Huang, Xiang; Chang, Qiang; Zhao, Xinyu; Sousa, Andre M M; Wang, Daifeng	February 27, 2023	Not Determined
36932057	Create Study	Antipsychotic drug use complicates assessment of gene expression changes associated with schizophrenia.	Translational psychiatry	Schulmann, Anton; Marenco, Stefano; Vawter, Marquis P; Akula, Nirmala; Limon, Agenor; Mandal, Ajeet; Auluck, Pavan K; Patel, Yash; Lipska, Barbara K; McMahon, Francis J	March 17, 2023	Not Determined
36882872	Create Study	Multi-ancestry phenome-wide association of complement component 4 variation with psychiatric and brain phenotypes in youth.	Genome biology	Hernandez, Leanna M; Kim, Minsoo; Zhang, Pan; Bethlehem, Richard A I; Hoftman, Gil; Loughnan, Robert; Smith, Diana; Bookheimer, Susan Y; Fan, Chun Chieh; Bearden, Carrie E; Thompson, Wesley K; Gandal, Michael J	March 7, 2023	Not Determined
36862688	Create Study	Neuron-specific transcriptomic signatures indicate neuroinflammation and altered neuronal activity in ASD temporal cortex.	Proceedings of the National Academy of Sciences of the United States of America	Zhang, Pan; Omanska, Alicja; Ander, Bradley P; Gandal, Michael J; Stamova, Boryana; Schumann, Cynthia M	March 7, 2023	Not Determined
36857101	Create Study	No Increased Detection of Nucleic Acids of CNS-related Viruses in the Brains of Patients with Schizophrenia, Bipolar Disorder, and Autism Spectrum Disorder.	Schizophrenia bulletin	Min, Shishi; Gandal, Michael J; Kopp, Richard F; Liu, Chunyu; Chen, Chao	May 3, 2023	Not Determined
36834916	Create Study	Characterization of De Novo Promoter Variants in Autism Spectrum Disorder with Massively Parallel Reporter Assays.	International journal of molecular sciences	Koesterich, Justin; An, Joon-Yong; Inoue, Fumitaka; Sohota, Ajuni; Ahituv, Nadav; Sanders, Stephan J; Kreimer, Anat	February 9, 2023	Not Determined
36824961	Create Study	Integrated single cell and unsupervised spatial transcriptomic analysis defines molecular anatomy of the human dorsolateral prefrontal cortex.	bioRxiv : the preprint server for biology	Huuki-Myers, Louise; Spangler, Abby; Eagles, Nick; Montgomery, Kelsey D; Kwon, Sang Ho; Guo, Boyi; Grant-Peters, Melissa; Divecha, Heena R; Tippani, Madhavi; Sriworarat, Chaichontat; Nguyen, Annie B; Ravichandran, Prashanthi; Tran, Matthew N; Seyedian, Arta; PsychENCODE consortium; Hyde, Thomas M; Kleinman, Joel E; Battle, Alexis; Page, Stephanie C; Ryten, Mina; Hicks, Stephanie C; Martinowich, Keri; Collado-Torres, Leonardo; Maynard, Kristen R	February 15, 2023	Not Determined
36824845	Create Study	Massively parallel characterization of psychiatric disorder-associated and cell-type-specific regulatory elements in the developing human cortex.	bioRxiv : the preprint server for biology	Deng, Chengyu; Whalen, Sean; Steyert, Marilyn; Ziffra, Ryan; Przytycki, Pawel F; Inoue, Fumitaka; Pereira, Daniela A; Capauto, Davide; Norton, Scott; Vaccarino, Flora M; Pollen, Alex; Nowakowski, Tomasz J; Ahituv, Nadav; Pollard, Katherine S	February 16, 2023	Not Determined
36798347	Create Study	More than a Feeling: Dermatological Changes Impacted by Spaceflight.	Research square	Cope, Henry; Elsborg, Jonas; Demharter, Samuel; Mcdonald, J Tyson; Wernecke, Chiara; Parthasarathy, Hari; Unadkat, Hriday; Chatrathi, Mira; Claudio, Jennifer; Reinsch, Sigrid; Zwart, Sara; Smith, Scott; Heer, Martina; Muratani, Masafumi; Meydan, Cem; Overbey, Eliah; Kim, JangKeun; Park, Jiwoon; Schisler, Jonathan; Mason, Christopher; Szewczyk, Nathaniel; Willis, Craig; Salam, Amr; Beheshti, Afshin	February 10, 2023	Not Determined
36790927	Create Study	Genomic profiling of HIV-1 integration in microglia cells links viral integration to the topologically associated domains.	Cell reports	Rheinberger, Mona; Costa, Ana Luisa; Kampmann, Martin; Glavas, Dunja; Shytaj, Iart Luca; Sreeram, Sheetal; Penzo, Carlotta; Tibroni, Nadine; Garcia-Mesa, Yoelvis; Leskov, Konstantin; Fackler, Oliver T; Vlahovicek, Kristian; Karn, Jonathan; Lucic, Bojana; Herrmann, Carl; Lusic, Marina	February 28, 2023	Not Determined
36778507	Create Study	A Higher Dysregulation Burden of Brain DNA Methylation in Female Patients Implicated in the Sex Bias of Schizophrenia.	Research square	Chen, Chao; Zhou, Jiaqi; Xia, Yan; Li, Miao; Chen, Yu; Dai, Jiacheng; Liu, Chunyu	January 30, 2023	Not Determined
36747726	Create Study	Performant web-based interactive visualization tool for spatially-resolved transcriptomics experiments.	bioRxiv : the preprint server for biology	Sriworarat, Chaichontat; Nguyen, Annie; Eagles, Nicholas J; Collado-Torres, Leonardo; Martinowich, Keri; Maynard, Kristen R; Hicks, Stephanie C	February 23, 2023	Not Determined
36702997	Create Study	Genome-wide analyses of ADHD identify 27 risk loci, refine the genetic architecture and implicate several cognitive domains.	Nature genetics	Demontis, Ditte; Walters, G Bragi; Athanasiadis, Georgios; Walters, Raymond; Therrien, Karen; Nielsen, Trine Tollerup; Farajzadeh, Leila; Voloudakis, Georgios; Bendl, Jaroslav; Zeng, Biau; Zhang, Wen; Grove, Jakob; Als, Thomas D; Duan, Jinjie; Satterstrom, F Kyle; Bybjerg-Grauholm, Jonas; Bækved-Hansen, Marie; Gudmundsson, Olafur O; Magnusson, Sigurdur H; Baldursson, Gisli; Davidsdottir, Katrin; Haraldsdottir, Gyda S; Agerbo, Esben; Hoffman, Gabriel E; Dalsgaard, Søren; Martin, Joanna; Ribasés, Marta; Boomsma, Dorret I; Soler Artigas, Maria; Roth Mota, Nina; Howrigan, Daniel; Medland, Sarah E; Zayats, Tetyana; Rajagopal, Veera M; ADHD Working Group of the Psychiatric Genomics Consortium; iPSYCH-Broad Consortium; Nordentoft, Merete; Mors, Ole; Hougaard, David M; Mortensen, Preben Bo; Daly, Mark J; Faraone, Stephen V; Stefansson, Hreinn; Roussos, Panos; Franke, Barbara; Werge, Thomas; Neale, Benjamin M; Stefansson, Kari; Børglum, Anders D	February 1, 2023	Not Determined
36672826	Create Study	Ozone Disinfection for Elimination of Bacteria and Degradation of SARS-CoV2 RNA for Medical Environments.	Genes	Westover, Craig; Rahmatulloev, Savlatjon; Danko, David; Afshin, Evan E; O'Hara, Niamh B; Ounit, Rachid; Bezdan, Daniela; Mason, Christopher E	December 28, 2022	Not Determined
36652379	Create Study	The relationship between case-control differential gene expression from brain tissue and genetic associations in schizophrenia.	American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics	Clifton, Nicholas E; Schulmann, Anton; Schizophrenia Working Group of the Psychiatric Genomics Consortium; Holmans, Peter A; O'Donovan, Michael C; Vawter, Marquis P	January 1, 2023	Not Determined
36648426	Create Study	Predicting brain-regional gene regulatory networks from multi-omics for Alzheimer''s disease phenotypes and Covid-19 severity.	Human molecular genetics	Khullar, Saniya; Wang, Daifeng	May 18, 2023	Not Determined
36640767	Create Study	Machine learning dissection of human accelerated regions in primate neurodevelopment.	Neuron	Whalen, Sean; Inoue, Fumitaka; Ryu, Hane; Fair, Tyler; Markenscoff-Papadimitriou, Eirene; Keough, Kathleen; Kircher, Martin; Martin, Beth; Alvarado, Beatriz; Elor, Orry; Laboy Cintron, Dianne; Williams, Alex; Hassan Samee, Md Abul; Thomas, Sean; Krencik, Robert; Ullian, Erik M; Kriegstein, Arnold; Rubenstein, John L; Shendure, Jay; Pollen, Alex A; Ahituv, Nadav; Pollard, Katherine S	March 15, 2023	Not Determined
36624241	Create Study	Genome-wide association study of school grades identifies genetic overlap between language ability, psychopathology and creativity.	Scientific reports	Rajagopal, Veera M; Ganna, Andrea; Coleman, Jonathan R I; Allegrini, Andrea; Voloudakis, Georgios; Grove, Jakob; Als, Thomas D; Horsdal, Henriette T; Petersen, Liselotte; Appadurai, Vivek; Schork, Andrew; Buil, Alfonso; Bulik, Cynthia M; Bybjerg-Grauholm, Jonas; Bækvad-Hansen, Marie; Hougaard, David M; Mors, Ole; Nordentoft, Merete; Werge, Thomas; iPSYCH-Broad Consortium; Mortensen, Preben Bo; Breen, Gerome; Roussos, Panos; Plomin, Robert; Agerbo, Esben; Børglum, Anders D; Demontis, Ditte	January 9, 2023	Not Determined
36514162	Create Study	Spatial omics technologies at multimodal and single cell/subcellular level.	Genome biology	Park, Jiwoon; Kim, Junbum; Lewy, Tyler; Rice, Charles M; Elemento, Olivier; Rendeiro, André F; Mason, Christopher E	December 13, 2022	Not Determined
36495218	Create Study	GeneticsMakie.jl: a versatile and scalable toolkit for visualizing locus-level genetic and genomic data.	Bioinformatics (Oxford, England)	Kim, Minsoo; Vo, Daniel D; Kumagai, Michi E; Jops, Connor T; Gandal, Michael J	January 1, 2023	Not Determined
36477833	Create Study	Insights from incorporating quantum computing into drug design workflows.	Bioinformatics (Oxford, England)	Lau, Bayo; Emani, Prashant S; Chapman, Jackson; Yao, Lijing; Lam, Tarsus; Merrill, Paul; Warrell, Jonathan; Gerstein, Mark B; Lam, Hugo Y K	January 1, 2023	Not Determined
36474001	Create Study	Microglia-containing human brain organoids for the study of brain development and pathology.	Molecular psychiatry	Zhang, Wendiao; Jiang, Jiamei; Xu, Zhenhong; Yan, Hongye; Tang, Beisha; Liu, Chunyu; Chen, Chao; Meng, Qingtuan	January 1, 2023	Not Determined
36424644	Create Study	Illuminating links between cis-regulators and trans-acting variants in the human prefrontal cortex.	Genome medicine	Liu, Shuang; Won, Hyejung; Clarke, Declan; Matoba, Nana; Khullar, Saniya; Mu, Yudi; Wang, Daifeng; Gerstein, Mark	November 24, 2022	Not Determined
36424395	Create Study	Neuroimmune transcriptome changes in patient brains of psychiatric and neurological disorders.	Molecular psychiatry	Chen, Yu; Dai, Jiacheng; Tang, Longfei; Mikhailova, Tatiana; Liang, Qiuman; Li, Miao; Zhou, Jiaqi; Kopp, Richard F; Weickert, Cynthia; Chen, Chao; Liu, Chunyu	February 1, 2023	Not Determined
36413071	Create Study	IMMerge: merging imputation data at scale.	Bioinformatics (Oxford, England)	Zhu, Wanying; Chen, Hung-Hsin; Petty, Alexander S; Petty, Lauren E; Polikowsky, Hannah G; Gamazon, Eric R; Below, Jennifer E; Highland, Heather M	January 1, 2023	Not Determined
36386965	Create Study	Differential H3K9me2 heterochromatin levels and concordant mRNA expression in postmortem brain tissue of individuals with schizophrenia, bipolar, and controls.	Frontiers in psychiatry	Rizavi, Hooriyah S; Chase, Kayla A; Liu, Chunyu; Gavin, Hannah; Rosen, Cherise; Xia, Cuihua; Guidotti, Alessandro; Sharma, Rajiv P	January 1, 2022	Not Determined
36380236	Create Study	Rare tandem repeat expansions associate with genes involved in synaptic and neuronal signaling functions in schizophrenia.	Molecular psychiatry	Wen, Jia; Trost, Brett; Engchuan, Worrawat; Halvorsen, Matthew; Pallotto, Linda M; Mitina, Aleksandra; Ancalade, NaEshia; Farrell, Martilias; Backstrom, Ian; Guo, Keyi; Pellecchia, Giovanna; Thiruvahindrapuram, Bhooma; Giusti-Rodriguez, Paola; Rosen, Jonathan David; Li, Yun; Won, Hyejung; Magnusson, Patrik K E; Gyllensten, Ulf; Bassett, Anne S; Hultman, Christina M; Sullivan, Patrick F; Yuen, Ryan K C; Szatkiewicz, Jin P	January 1, 2023	Not Determined
36370000	Create Study	GALC variants affect galactosylceramidase enzymatic activity and risk of Parkinson''s disease.	Brain : a journal of neurology	Senkevich, Konstantin; Zorca, Cornelia E; Dworkind, Aliza; Rudakou, Uladzislau; Somerville, Emma; Yu, Eric; Ermolaev, Alexey; Nikanorova, Daria; Ahmad, Jamil; Ruskey, Jennifer A; Asayesh, Farnaz; Spiegelman, Dan; Fahn, Stanley; Waters, Cheryl; Monchi, Oury; Dauvilliers, Yves; Dupré, Nicolas; Greenbaum, Lior; Hassin-Baer, Sharon; Grenn, Francis P; Chiang, Ming Sum Ruby; Sardi, S Pablo; Vanderperre, Benoît; Blauwendraat, Cornelis; Trempe, Jean-François; Fon, Edward A; Durcan, Thomas M; Alcalay, Roy N; Gan-Or, Ziv	May 2, 2023	Not Determined
36341024	Create Study	Best practices for multi-ancestry, meta-analytic transcriptome-wide association studies: Lessons from the Global Biobank Meta-analysis Initiative.	Cell genomics	Bhattacharya, Arjun; Hirbo, Jibril B; Zhou, Dan; Zhou, Wei; Zheng, Jie; Kanai, Masahiro; Global Biobank Meta-analysis Initiative; Pasaniuc, Bogdan; Gamazon, Eric R; Cox, Nancy J	October 12, 2022	Not Determined
36323788	Create Study	Broad transcriptomic dysregulation occurs across the cerebral cortex in ASD.	Nature	Gandal, Michael J; Haney, Jillian R; Wamsley, Brie; Yap, Chloe X; Parhami, Sepideh; Emani, Prashant S; Chang, Nathan; Chen, George T; Hoftman, Gil D; de Alba, Diego; Ramaswami, Gokul; Hartl, Christopher L; Bhattacharya, Arjun; Luo, Chongyuan; Jin, Ting; Wang, Daifeng; Kawaguchi, Riki; Quintero, Diana; Ou, Jing; Wu, Ye Emily; Parikshak, Neelroop N; Swarup, Vivek; Belgard, T Grant; Gerstein, Mark; Pasaniuc, Bogdan; Geschwind, Daniel H	November 1, 2022	Not Determined
36323256	Create Study	Spatiotemporal and genetic regulation of A-to-I editing throughout human brain development.	Cell reports	Cuddleston, Winston H; Fan, Xuanjia; Sloofman, Laura; Liang, Lindsay; Mossotto, Enrico; Moore, Kendall; Zipkowitz, Sarah; Wang, Minghui; Zhang, Bin; Wang, Jiebiao; Sestan, Nenad; Devlin, Bernie; Roeder, Kathryn; Sanders, Stephan J; Buxbaum, Joseph D; Breen, Michael S	November 1, 2022	Not Determined
36289406	Create Study	Annotating genetic variants to target genes using H-MAGMA.	Nature protocols	Sey, Nancy Y A; Pratt, Brandon M; Won, Hyejung	January 1, 2023	Not Determined
36264161	Create Study	An Aged/Autoimmune B-cell Program Defines the Early Transformation of Extranodal Lymphomas.	Cancer discovery	Venturutti, Leandro; Rivas, Martin A; Pelzer, Benedikt W; Flümann, Ruth; Hansen, Julia; Karagiannidis, Ioannis; Xia, Min; McNally, Dylan R; Isshiki, Yusuke; Lytle, Andrew; Teater, Matt; Chin, Christopher R; Meydan, Cem; Knittel, Gero; Ricker, Edd; Mason, Christopher E; Ye, Xiaofei; Pan-Hammarström, Qiang; Steidl, Christian; Scott, David W; Reinhardt, Hans Christian; Pernis, Alessandra B; Béguelin, Wendy; Melnick, Ari M	January 9, 2023	Not Determined
36183905	Create Study	Challenges and opportunities for precision medicine in neurodevelopmental disorders.	Advanced drug delivery reviews	Chen, George T; Geschwind, Daniel H	December 1, 2022	Not Determined
36179695	Create Study	TGFβ superfamily signaling regulates the state of human stem cell pluripotency and capacity to create well-structured telencephalic organoids.	Stem cell reports	Watanabe, Momoko; Buth, Jessie E; Haney, Jillian R; Vishlaghi, Neda; Turcios, Felix; Elahi, Lubayna S; Gu, Wen; Pearson, Caroline A; Kurdian, Arinnae; Baliaouri, Natella V; Collier, Amanda J; Miranda, Osvaldo A; Dunn, Natassia; Chen, Di; Sabri, Shan; Torre-Ubieta, Luis de la; Clark, Amander T; Plath, Kathrin; Christofk, Heather R; Kornblum, Harley I; Gandal, Michael J; Novitch, Bennett G	October 11, 2022	Not Determined
36163279	Create Study	Population-level variation in enhancer expression identifies disease mechanisms in the human brain.	Nature genetics	Dong, Pengfei; Hoffman, Gabriel E; Apontes, Pasha; Bendl, Jaroslav; Rahman, Samir; Fernando, Michael B; Zeng, Biao; Vicari, James M; Zhang, Wen; Girdhar, Kiran; Townsley, Kayla G; Misir, Ruth; CommonMind Consortium; Brennand, Kristen J; Haroutunian, Vahram; Voloudakis, Georgios; Fullard, John F; Roussos, Panos	October 1, 2022	Not Determined
36163277	Create Study	Identification of shared and differentiating genetic architecture for autism spectrum disorder, attention-deficit hyperactivity disorder and case subgroups.	Nature genetics	Mattheisen, Manuel; Grove, Jakob; Als, Thomas D; Martin, Joanna; Voloudakis, Georgios; Meier, Sandra; Demontis, Ditte; Bendl, Jaroslav; Walters, Raymond; Carey, Caitlin E; Rosengren, Anders; Strom, Nora I; Hauberg, Mads Engel; Zeng, Biao; Hoffman, Gabriel; Zhang, Wen; Bybjerg-Grauholm, Jonas; Bækvad-Hansen, Marie; Agerbo, Esben; Cormand, Bru; Nordentoft, Merete; Werge, Thomas; Mors, Ole; Hougaard, David M; Buxbaum, Joseph D; Faraone, Stephen V; Franke, Barbara; Dalsgaard, Søren; Mortensen, Preben B; Robinson, Elise B; Roussos, Panos; Neale, Benjamin M; Daly, Mark J; Børglum, Anders D	October 1, 2022	Not Determined
36124823	Create Study	Specific Associations Between Type of Childhood Abuse and Elevated C-Reactive Protein in Young Adult Psychiatric Rehabilitation Participants.	The international journal of neuropsychopharmacology	Jabbi, Mbemba M; Harvey, Philip D; Kotwicki, Raymond J; Nemeroff, Charles B	November 17, 2022	Not Determined
36123423	Create Study	Comment on: What genes are differentially expressed in individuals with schizophrenia? A systematic review.	Molecular psychiatry	Hoffman, Gabriel E; Jaffe, Andrew E; Gandal, Michael J; Collado-Torres, Leonardo; Sieberts, Solveig K; Devlin, Bernie; Geschwind, Daniel H; Weinberger, Daniel R; Roussos, Panos	February 1, 2023	Not Determined
36094096	Create Study	Integrating multi-omics summary data using a Mendelian randomization framework.	Briefings in bioinformatics	Jin, Chong; Lee, Brian; Shen, Li; Long, Qi; Alzheimer’s Disease Neuroimaging Initiative; Alzheimer’s Disease Metabolomics Consortium	November 19, 2022	Not Determined
36085003	Create Study	Focus on your locus with a massively parallel reporter assay.	Journal of neurodevelopmental disorders	McAfee, Jessica C; Bell, Jessica L; Krupa, Oleh; Matoba, Nana; Stein, Jason L; Won, Hyejung	September 9, 2022	Not Determined
36083269	Create Study	Building integrative functional maps of gene regulation.	Human molecular genetics	Xu, Jinrui; Pratt, Henry E; Moore, Jill E; Gerstein, Mark B; Weng, Zhiping	October 20, 2022	Not Determined
36070559	Create Study	Enhancer Function and Evolutionary Roles of Human Accelerated Regions.	Annual review of genetics	Whalen, Sean; Pollard, Katherine S	November 30, 2022	Not Determined
36064543	Create Study	A translational genomics approach identifies IL10RB as the top candidate gene target for COVID-19 susceptibility.	NPJ genomic medicine	Voloudakis, Georgios; Vicari, James M; Venkatesh, Sanan; Hoffman, Gabriel E; Dobrindt, Kristina; Zhang, Wen; Beckmann, Noam D; Higgins, Christina A; Argyriou, Stathis; Jiang, Shan; Hoagland, Daisy; Gao, Lina; Corvelo, André; Cho, Kelly; Lee, Kyung Min; Bian, Jiantao; Lee, Jennifer S; Iyengar, Sudha K; Luoh, Shiuh-Wen; Akbarian, Schahram; Striker, Robert; Assimes, Themistocles L; Schadt, Eric E; Lynch, Julie A; Merad, Miriam; tenOever, Benjamin R; Charney, Alexander W; Mount Sinai COVID-19 Biobank; VA Million Veteran Program COVID-19 Science Initiative; Brennand, Kristen J; Fullard, John F; Roussos, Panos	September 5, 2022	Not Determined
36057282	Create Study	Multiplexed functional genomic assays to decipher the noncoding genome.	Human molecular genetics	Cooper, Yonatan A; Guo, Qiuyu; Geschwind, Daniel H	October 20, 2022	Not Determined
36050550	Create Study	Polygenic enrichment distinguishes disease associations of individual cells in single-cell RNA-seq data.	Nature genetics	Zhang, Martin Jinye; Hou, Kangcheng; Dey, Kushal K; Sakaue, Saori; Jagadeesh, Karthik A; Weinand, Kathryn; Taychameekiatchai, Aris; Rao, Poorvi; Pisco, Angela Oliveira; Zou, James; Wang, Bruce; Gandal, Michael; Raychaudhuri, Soumya; Pasaniuc, Bogdan; Price, Alkes L	October 1, 2022	Not Determined
36007006	Create Study	Molecular and cellular evolution of the primate dorsolateral prefrontal cortex.	Science (New York, N.Y.)	Ma, Shaojie; Skarica, Mario; Li, Qian; Xu, Chuan; Risgaard, Ryan D; Tebbenkamp, Andrew T N; Mato-Blanco, Xoel; Kovner, Rothem; Krsnik, Željka; de Martin, Xabier; Luria, Victor; Martí-Pérez, Xavier; Liang, Dan; Karger, Amir; Schmidt, Danielle K; Gomez-Sanchez, Zachary; Qi, Cai; Gobeske, Kevin T; Pochareddy, Sirisha; Debnath, Ashwin; Hottman, Cade J; Spurrier, Joshua; Teo, Leon; Boghdadi, Anthony G; Homman-Ludiye, Jihane; Ely, John J; Daadi, Etienne W; Mi, Da; Daadi, Marcel; Marín, Oscar; Hof, Patrick R; Rasin, Mladen-Roko; Bourne, James; Sherwood, Chet C; Santpere, Gabriel; Girgenti, Matthew J; Strittmatter, Stephen M; Sousa, André M M; Sestan, Nenad	September 30, 2022	Not Determined
35915230	Create Study	Single-cell transcriptional profiling in brain reward structures.	Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology	Day, Jeremy J; Martinowich, Keri	January 1, 2023	Not Determined
35851062	Create Study	High-throughput techniques enable advances in the roles of DNA and RNA secondary structures in transcriptional and post-transcriptional gene regulation.	Genome biology	Georgakopoulos-Soares, Ilias; Chan, Candace S Y; Ahituv, Nadav; Hemberg, Martin	July 18, 2022	Not Determined
35849618	Create Study	Single-cell network biology characterizes cell type gene regulation for drug repurposing and phenotype prediction in Alzheimer''s disease.	PLoS computational biology	Gupta, Chirag; Xu, Jielin; Jin, Ting; Khullar, Saniya; Liu, Xiaoyu; Alatkar, Sayali; Cheng, Feixiong; Wang, Daifeng	July 1, 2022	Not Determined
35844224	Create Study	Distinct Phenotypes of Inflammation Associated Macrophages and Microglia in the Prefrontal Cortex Schizophrenia Compared to Controls.	Frontiers in neuroscience	Zhu, Yunting; Webster, Maree J; Murphy, Caitlin E; Middleton, Frank A; Massa, Paul T; Liu, Chunyu; Dai, Rujia; Weickert, Cyndi Shannon	January 1, 2022	Not Determined
35767289	Create Study	Convergence and Divergence of Rare Genetic Disorders on Brain Phenotypes: A Review.	JAMA psychiatry	Raznahan, Armin; Won, Hyejung; Glahn, David C; Jacquemont, Sébastien	August 1, 2022	Not Determined
35750513	Create Study	The Neuroepigenome: Implications of Chemical and Physical Modifications of Genomic DNA in Schizophrenia.	Biological psychiatry	Girdhar, Kiran; Rahman, Samir; Dong, Pengfei; Fullard, John F; Roussos, Panos	September 15, 2022	Not Determined
35689177	Create Study	spatialLIBD: an R/Bioconductor package to visualize spatially-resolved transcriptomics data.	BMC genomics	Pardo, Brenda; Spangler, Abby; Weber, Lukas M; Page, Stephanie C; Hicks, Stephanie C; Jaffe, Andrew E; Martinowich, Keri; Maynard, Kristen R; Collado-Torres, Leonardo	June 10, 2022	Not Determined
35680911	Create Study	Association between resting-state functional brain connectivity and gene expression is altered in autism spectrum disorder.	Nature communications	Berto, Stefano; Treacher, Alex H; Caglayan, Emre; Luo, Danni; Haney, Jillian R; Gandal, Michael J; Geschwind, Daniel H; Montillo, Albert A; Konopka, Genevieve	June 9, 2022	Not Determined
35588487	Create Study	Revisiting the Need for a PTSD Brain Bank; Commentary on Friedman.	Psychiatry	Vermetten, Eric; Snijders, Clara; Daskalakis, Nikolaos P; Rutten, Bart P F	January 1, 2022	Not Determined
35573091	Create Study	High-throughput characterization of the role of non-B DNA motifs on promoter function.	Cell genomics	Georgakopoulos-Soares, Ilias; Victorino, Jesus; Parada, Guillermo E; Agarwal, Vikram; Zhao, Jingjing; Wong, Hei Yuen; Umar, Mubarak Ishaq; Elor, Orry; Muhwezi, Allan; An, Joon-Yong; Sanders, Stephan J; Kwok, Chun Kit; Inoue, Fumitaka; Hemberg, Martin; Ahituv, Nadav	April 13, 2022	Not Determined
35552371	Create Study	Sex differences in the genetic architecture of cognitive resilience to Alzheimer''s disease.	Brain : a journal of neurology	Eissman, Jaclyn M; Dumitrescu, Logan; Mahoney, Emily R; Smith, Alexandra N; Mukherjee, Shubhabrata; Lee, Michael L; Scollard, Phoebe; Choi, Seo Eun; Bush, William S; Engelman, Corinne D; Lu, Qiongshi; Fardo, David W; Trittschuh, Emily H; Mez, Jesse; Kaczorowski, Catherine C; Hernandez Saucedo, Hector; Widaman, Keith F; Buckley, Rachel F; Properzi, Michael J; Mormino, Elizabeth C; Yang, Hyun Sik; Harrison, Theresa M; Hedden, Trey; Nho, Kwangsik; Andrews, Shea J; Tommet, Douglas; Hadad, Niran; Sanders, R Elizabeth; Ruderfer, Douglas M; Gifford, Katherine A; Zhong, Xiaoyuan; Raghavan, Neha S; Vardarajan, Badri N; Alzheimer’s Disease Neuroimaging Initiative (ADNI); Alzheimer’s Disease Genetics Consortium (ADGC); A4 Study Team; Pericak-Vance, Margaret A; Farrer, Lindsay A; Wang, Li San; Cruchaga, Carlos; Schellenberg, Gerard D; Cox, Nancy J; Haines, Jonathan L; Keene, C Dirk; Saykin, Andrew J; Larson, Eric B; Sperling, Reisa A; Mayeux, Richard; Cuccaro, Michael L; Bennett, David A; Schneider, Julie A; Crane, Paul K; Jefferson, Angela L; Hohman, Timothy J	July 29, 2022	Not Determined
35549943	Create Study	Sustained correction of hippocampal neurogenic and cognitive deficits after a brief treatment by Nutlin-3 in a mouse model of fragile X syndrome.	BMC medicine	Javadi, Sahar; Li, Yue; Sheng, Jie; Zhao, Lucy; Fu, Yao; Wang, Daifeng; Zhao, Xinyu	May 13, 2022	Not Determined
35482478	Create Study	SpatialExperiment: infrastructure for spatially-resolved transcriptomics data in R using Bioconductor.	Bioinformatics (Oxford, England)	Righelli, Dario; Weber, Lukas M; Crowell, Helena L; Pardo, Brenda; Collado-Torres, Leonardo; Ghazanfar, Shila; Lun, Aaron T L; Hicks, Stephanie C; Risso, Davide	May 26, 2022	Not Determined
35480297	Create Study	A deep manifold-regularized learning model for improving phenotype prediction from multi-modal data.	Nature computational science	Nguyen, Nam D; Huang, Jiawei; Wang, Daifeng	January 1, 2022	Not Determined
35474104	Create Study	Epitranscriptomic dynamics in brain development and disease.	Molecular psychiatry	Shafik, Andrew M; Allen, Emily G; Jin, Peng	September 1, 2022	Not Determined
35440779	Create Study	Genomics, convergent neuroscience and progress in understanding autism spectrum disorder.	Nature reviews. Neuroscience	Willsey, Helen Rankin; Willsey, A Jeremy; Wang, Belinda; State, Matthew W	June 1, 2022	Not Determined
35422469	Create Study	Chromatin architecture in addiction circuitry identifies risk genes and potential biological mechanisms underlying cigarette smoking and alcohol use traits.	Molecular psychiatry	Sey, Nancy Y A; Hu, Benxia; Iskhakova, Marina; Lee, Sool; Sun, Huaigu; Shokrian, Neda; Ben Hutta, Gabriella; Marks, Jesse A; Quach, Bryan C; Johnson, Eric O; Hancock, Dana B; Akbarian, Schahram; Won, Hyejung	July 1, 2022	Not Determined
35379910	Create Study	The impact of educational attainment, intelligence and intellectual disability on schizophrenia: a Swedish population-based register and genetic study.	Molecular psychiatry	Song, Jie; Yao, Shuyang; Kowalec, Kaarina; Lu, Yi; Sariaslan, Amir; Szatkiewicz, Jin P; Larsson, Henrik; Lichtenstein, Paul; Hultman, Christina M; Sullivan, Patrick F	May 1, 2022	Not Determined
35351869	Create Study	Human forebrain organoids reveal connections between valproic acid exposure and autism risk.	Translational psychiatry	Meng, Qingtuan; Zhang, Wendiao; Wang, Xuan; Jiao, Chuan; Xu, Sheng; Liu, Chunyu; Tang, Beisha; Chen, Chao	March 29, 2022	Not Determined
35332326	Create Study	Chromatin domain alterations linked to 3D genome organization in a large cohort of schizophrenia and bipolar disorder brains.	Nature neuroscience	Girdhar, Kiran; Hoffman, Gabriel E; Bendl, Jaroslav; Rahman, Samir; Dong, Pengfei; Liao, Will; Hauberg, Mads E; Sloofman, Laura; Brown, Leanne; Devillers, Olivia; Kassim, Bibi S; Wiseman, Jennifer R; Park, Royce; Zharovsky, Elizabeth; Jacobov, Rivky; Flatow, Elie; Kozlenkov, Alexey; Gilgenast, Thomas; Johnson, Jessica S; Couto, Lizette; Peters, Mette A; Phillips-Cremins, Jennifer E; Hahn, Chang-Gyu; Gur, Raquel E; Tamminga, Carol A; Lewis, David A; Haroutunian, Vahram; PsychENCODE Consortium; Dracheva, Stella; Lipska, Barbara K; Marenco, Stefano; Kundakovic, Marija; Fullard, John F; Jiang, Yan; Roussos, Panos; Akbarian, Schahram	April 1, 2022	Not Determined
35315433	Create Study	Massively parallel reporter perturbation assays uncover temporal regulatory architecture during neural differentiation.	Nature communications	Kreimer, Anat; Ashuach, Tal; Inoue, Fumitaka; Khodaverdian, Alex; Deng, Chengyu; Yosef, Nir; Ahituv, Nadav	March 21, 2022	Not Determined
35274675	Create Study	CellWalkR: an R package for integrating and visualizing single-cell and bulk data to resolve regulatory elements.	Bioinformatics (Oxford, England)	Przytycki, Pawel F; Pollard, Katherine S	April 28, 2022	Not Determined
35272348	Create Study	LRcell: detecting the source of differential expression at the sub-cell-type level from bulk RNA-seq data.	Briefings in bioinformatics	Ma, Wenjing; Sharma, Sumeet; Jin, Peng; Gourley, Shannon L; Qin, Zhaohui S	May 13, 2022	Not Determined
35260864	Create Study	Amygdala and anterior cingulate transcriptomes from individuals with bipolar disorder reveal downregulated neuroimmune and synaptic pathways.	Nature neuroscience	Zandi, Peter P; Jaffe, Andrew E; Goes, Fernando S; Burke, Emily E; Collado-Torres, Leonardo; Huuki-Myers, Louise; Seyedian, Arta; Lin, Yian; Seifuddin, Fayaz; Pirooznia, Mehdi; Ross, Christopher A; Kleinman, Joel E; Weinberger, Daniel R; Hyde, Thomas M	March 1, 2022	Not Determined
35236118	Create Study	Genetics and Brain Transcriptomics of Completed Suicide.	The American journal of psychiatry	Punzi, Giovanna; Ursini, Gianluca; Chen, Qiang; Radulescu, Eugenia; Tao, Ran; Huuki, Louise A; Di Carlo, Pasquale; Collado-Torres, Leonardo; Shin, Joo Heon; Catanesi, Roberto; Jaffe, Andrew E; Hyde, Thomas M; Kleinman, Joel E; Mackay, Trudy F C; Weinberger, Daniel R	March 1, 2022	Not Determined
35233546	Create Study	System-wide transcriptome damage and tissue identity loss in COVID-19 patients.	Cell reports. Medicine	Park, Jiwoon; Foox, Jonathan; Hether, Tyler; Danko, David C; Warren, Sarah; Kim, Youngmi; Reeves, Jason; Butler, Daniel J; Mozsary, Christopher; Rosiene, Joel; Shaiber, Alon; Afshin, Evan E; MacKay, Matthew; Rendeiro, André F; Bram, Yaron; Chandar, Vasuretha; Geiger, Heather; Craney, Arryn; Velu, Priya; Melnick, Ari M; Hajirasouliha, Iman; Beheshti, Afshin; Taylor, Deanne; Saravia-Butler, Amanda; Singh, Urminder; Wurtele, Eve Syrkin; Schisler, Jonathan; Fennessey, Samantha; Corvelo, André; Zody, Michael C; Germer, Soren; Salvatore, Steven; Levy, Shawn; Wu, Shixiu; Tatonetti, Nicholas P; Shapira, Sagi; Salvatore, Mirella; Westblade, Lars F; Cushing, Melissa; Rennert, Hanna; Kriegel, Alison J; Elemento, Olivier; Imielinski, Marcin; Rice, Charles M; Borczuk, Alain C; Meydan, Cem; Schwartz, Robert E; Mason, Christopher E	February 15, 2022	Not Determined
35170363	Create Study	Evaluating the challenges and reproducibility of studies investigating DNA methylation signatures of psychological stress.	Epigenomics	Zhang, Yun; Liu, Chunyu	April 1, 2022	Not Determined
35136070	Create Study	SMAP is a pipeline for sample matching in proteogenomics.	Nature communications	Li, Ling; Niu, Mingming; Erickson, Alyssa; Luo, Jie; Rowbotham, Kincaid; Guo, Kai; Huang, He; Li, Yuxin; Jiang, Yi; Hur, Junguk; Liu, Chunyu; Peng, Junmin; Wang, Xusheng	February 8, 2022	Not Determined
35132260	Create Study	Curated variation benchmarks for challenging medically relevant autosomal genes.	Nature biotechnology	Wagner, Justin; Olson, Nathan D; Harris, Lindsay; McDaniel, Jennifer; Cheng, Haoyu; Fungtammasan, Arkarachai; Hwang, Yih-Chii; Gupta, Richa; Wenger, Aaron M; Rowell, William J; Khan, Ziad M; Farek, Jesse; Zhu, Yiming; Pisupati, Aishwarya; Mahmoud, Medhat; Xiao, Chunlin; Yoo, Byunggil; Sahraeian, Sayed Mohammad Ebrahim; Miller, Danny E; Jáspez, David; Lorenzo-Salazar, José M; Muñoz-Barrera, Adrián; Rubio-Rodríguez, Luis A; Flores, Carlos; Narzisi, Giuseppe; Evani, Uday Shanker; Clarke, Wayne E; Lee, Joyce; Mason, Christopher E; Lincoln, Stephen E; Miga, Karen H; Ebbert, Mark T W; Shumate, Alaina; Li, Heng; Chin, Chen-Shan; Zook, Justin M; Sedlazeck, Fritz J	May 1, 2022	Not Determined
35115012	Create Study	Comparison of confound adjustment methods in the construction of gene co-expression networks.	Genome biology	Cote, Alanna C; Young, Hannah E; Huckins, Laura M	February 3, 2022	Not Determined
35084939	Create Study	A single-cell atlas of the normal and malformed human brain vasculature.	Science (New York, N.Y.)	Winkler, Ethan A; Kim, Chang N; Ross, Jayden M; Garcia, Joseph H; Gil, Eugene; Oh, Irene; Chen, Lindsay Q; Wu, David; Catapano, Joshua S; Raygor, Kunal; Narsinh, Kazim; Kim, Helen; Weinsheimer, Shantel; Cooke, Daniel L; Walcott, Brian P; Lawton, Michael T; Gupta, Nalin; Zlokovic, Berislav V; Chang, Edward F; Abla, Adib A; Lim, Daniel A; Nowakowski, Tomasz J	March 4, 2022	Not Determined
35074468	Create Study	Betacoronavirus-specific alternate splicing.	Genomics	Karlebach, Guy; Aronow, Bruce; Baylin, Stephen B; Butler, Daniel; Foox, Jonathan; Levy, Shawn; Meydan, Cem; Mozsary, Christopher; Saravia-Butler, Amanda M; Taylor, Deanne M; Wurtele, Eve; Mason, Christopher E; Beheshti, Afshin; Robinson, Peter N	March 1, 2022	Not Determined
35058635	Create Study	Multi-ancestry eQTL meta-analysis of human brain identifies candidate causal variants for brain-related traits.	Nature genetics	Zeng, Biao; Bendl, Jaroslav; Kosoy, Roman; Fullard, John F; Hoffman, Gabriel E; Roussos, Panos	February 1, 2022	Not Determined
35045295	Create Study	A bidirectional competitive interaction between circHomer1 and Homer1b within the orbitofrontal cortex regulates reversal learning.	Cell reports	Hafez, Alexander K; Zimmerman, Amber J; Papageorgiou, Grigorios; Chandrasekaran, Jayapriya; Amoah, Stephen K; Lin, Rixing; Lozano, Evelyn; Pierotti, Caroline; Dell'Orco, Michela; Hartley, Brigham J; Alural, Begüm; Lalonde, Jasmin; Esposito, John Matthew; Berretta, Sabina; Squassina, Alessio; Chillotti, Caterina; Voloudakis, Georgios; Shao, Zhiping; Fullard, John F; Brennand, Kristen J; Turecki, Gustavo; Roussos, Panos; Perlis, Roy H; Haggarty, Stephen J; Perrone-Bizzozero, Nora; Brigman, Jonathan L; Mellios, Nikolaos	January 18, 2022	Not Determined
34912114	Create Study	Individual human cortical progenitors can produce excitatory and inhibitory neurons.	Nature	Delgado, Ryan N; Allen, Denise E; Keefe, Matthew G; Mancia Leon, Walter R; Ziffra, Ryan S; Crouch, Elizabeth E; Alvarez-Buylla, Arturo; Nowakowski, Tomasz J	January 1, 2022	Not Determined
34888418	Create Study	Children and Adolescents'' Psychological Well-Being Became Worse in Heavily Hit Chinese Provinces during the COVID-19 Epidemic.	Journal of psychiatry and brain science	Ma, Jing; Ding, Jun; Hu, Jiawen; Wang, Kai; Xiao, Shuaijun; Luo, Ting; Yu, Shuxiang; Liu, Chuntao; Xu, Yunxuan; Liu, Yingxian; Wang, Changhong; Guo, Suqin; Yang, Xiaohua; Song, Haidong; Geng, Yaoguo; Jin, Yu; Chen, Huayun; Liu, Chunyu	October 1, 2021	Not Determined
34872606	Create Study	The SEQC2 epigenomics quality control (EpiQC) study.	Genome biology	Foox, Jonathan; Nordlund, Jessica; Lalancette, Claudia; Gong, Ting; Lacey, Michelle; Lent, Samantha; Langhorst, Bradley W; Ponnaluri, V K Chaithanya; Williams, Louise; Padmanabhan, Karthik Ramaswamy; Cavalcante, Raymond; Lundmark, Anders; Butler, Daniel; Mozsary, Christopher; Gurvitch, Justin; Greally, John M; Suzuki, Masako; Menor, Mark; Nasu, Masaki; Alonso, Alicia; Sheridan, Caroline; Scherer, Andreas; Bruinsma, Stephen; Golda, Gosia; Muszynska, Agata; Łabaj, Paweł P; Campbell, Matthew A; Wos, Frank; Raine, Amanda; Liljedahl, Ulrika; Axelsson, Tomas; Wang, Charles; Chen, Zhong; Yang, Zhaowei; Li, Jing; Yang, Xiaopeng; Wang, Hongwei; Melnick, Ari; Guo, Shang; Blume, Alexander; Franke, Vedran; Ibanez de Caceres, Inmaculada; Rodriguez-Antolin, Carlos; Rosas, Rocio; Davis, Justin Wade; Ishii, Jennifer; Megherbi, Dalila B; Xiao, Wenming; Liao, Will; Xu, Joshua; Hong, Huixiao; Ning, Baitang; Tong, Weida; Akalin, Altuna; Wang, Yunliang; Deng, Youping; Mason, Christopher E	December 6, 2021	Not Determined
34822785	Create Study	Fundamental Biological Features of Spaceflight: Advancing the Field to Enable Deep-Space Exploration.	Cell	Afshinnekoo, Ebrahim; Scott, Ryan T; MacKay, Matthew J; Pariset, Eloise; Cekanaviciute, Egle; Barker, Richard; Gilroy, Simon; Hassane, Duane; Smith, Scott M; Zwart, Sara R; Nelman-Gonzalez, Mayra; Crucian, Brian E; Ponomarev, Sergey A; Orlov, Oleg I; Shiba, Dai; Muratani, Masafumi; Yamamoto, Masayuki; Richards, Stephanie E; Vaishampayan, Parag A; Meydan, Cem; Foox, Jonathan; Myrrhe, Jacqueline; Istasse, Eric; Singh, Nitin; Venkateswaran, Kasthuri; Keune, Jessica A; Ray, Hami E; Basner, Mathias; Miller, Jack; Vitaterna, Martha Hotz; Taylor, Deanne M; Wallace, Douglas; Rubins, Kathleen; Bailey, Susan M; Grabham, Peter; Costes, Sylvain V; Mason, Christopher E; Beheshti, Afshin	November 24, 2021	Not Determined
34819502	Create Study	LSD1 inhibition sustains T cell invigoration with a durable response to PD-1 blockade.	Nature communications	Liu, Yi; Debo, Brian; Li, Mingfeng; Shi, Zhennan; Sheng, Wanqiang; Shi, Yang	November 24, 2021	Not Determined
34799674	Create Study	Manifold learning analysis suggests strategies to align single-cell multimodal data of neuronal electrophysiology and transcriptomics.	Communications biology	Huang, Jiawei; Sheng, Jie; Wang, Daifeng	November 19, 2021	Not Determined
34798047	Create Study	Transcriptomic taxonomy and neurogenic trajectories of adult human, macaque, and pig hippocampal and entorhinal cells.	Neuron	Franjic, Daniel; Skarica, Mario; Ma, Shaojie; Arellano, Jon I; Tebbenkamp, Andrew T N; Choi, Jinmyung; Xu, Chuan; Li, Qian; Morozov, Yury M; Andrijevic, David; Vrselja, Zvonimir; Spajic, Ana; Santpere, Gabriel; Li, Mingfeng; Zhang, Shupei; Liu, Yang; Spurrier, Joshua; Zhang, Le; Gudelj, Ivan; Rapan, Lucija; Takahashi, Hideyuki; Huttner, Anita; Fan, Rong; Strittmatter, Stephen M; Sousa, Andre M M; Rakic, Pasko; Sestan, Nenad	February 2, 2022	Not Determined
34788620	Create Study	Full-length transcript sequencing of human and mouse cerebral cortex identifies widespread isoform diversity and alternative splicing.	Cell reports	Leung, Szi Kay; Jeffries, Aaron R; Castanho, Isabel; Jordan, Ben T; Moore, Karen; Davies, Jonathan P; Dempster, Emma L; Bray, Nicholas J; O'Neill, Paul; Tseng, Elizabeth; Ahmed, Zeshan; Collier, David A; Jeffery, Erin D; Prabhakar, Shyam; Schalkwyk, Leonard; Jops, Connor; Gandal, Michael J; Sheynkman, Gloria M; Hannon, Eilis; Mill, Jonathan	November 16, 2021	Not Determined
34758195	Create Study	Engagement of vascular early response genes typifies mild cognitive impairment.	Alzheimer''s & dementia : the journal of the Alzheimer''s Association	Katsel, Pavel; Fam, Peter; Tan, Weilun; Khan, Sonia; Gama-Sosa, Miguel; De Gasperi, Rita; Roussos, Panos; Robinson, Ari; Cooper, Itzik; Schnaider-Beeri, Michal; Haroutunian, Vahram	July 1, 2022	Not Determined
34749795	Create Study	The Sequencing Quality Control 2 study: establishing community standards for sequencing in precision medicine.	Genome biology	Mercer, Tim R; Xu, Joshua; Mason, Christopher E; Tong, Weida; MAQC/SEQC2 Consortium	November 8, 2021	Not Determined
34737457	Create Study	Recognizing the importance of childhood maltreatment as a critical factor in psychiatric diagnoses, treatment, research, prevention, and education.	Molecular psychiatry	Teicher, Martin H; Gordon, Jeoffry B; Nemeroff, Charles B	March 1, 2022	Not Determined
34728797	Create Study	Amygdala DCX and blood Cdk14 are implicated as cross-species indicators of individual differences in fear, extinction, and resilience to trauma exposure.	Molecular psychiatry	Maheu, M E; Sharma, S; King, G; Maddox, S A; Wingo, A; Lori, A; Michopoulos, V; Richardson, R; Ressler, K J	February 1, 2022	Not Determined
34680927	Create Study	Evaluation of Genotype-Based Gene Expression Model Performance: A Cross-Framework and Cross-Dataset Study.	Genes	Tavares, Vânia; Monteiro, Joana; Vassos, Evangelos; Coleman, Jonathan; Prata, Diana	September 28, 2021	Not Determined
34674833	Create Study	Multiple Comparisons and Inappropriate Statistical Testing Lead to Spurious Sex Differences in Gene Expression.	Biological psychiatry	Mukamel, Eran A	January 1, 2022	Not Determined
34668925	Create Study	Use of the PsycheMERGE Network to Investigate the Association Between Depression Polygenic Scores and White Blood Cell Count.	JAMA psychiatry	Sealock, Julia M; Lee, Younga H; Moscati, Arden; Venkatesh, Sanan; Voloudakis, Georgios; Straub, Peter; Singh, Kritika; Feng, Yen-Chen A; Ge, Tian; Roussos, Panos; Smoller, Jordan W; Chen, Guanhua; Davis, Lea K	December 1, 2021	Not Determined
34663447	Create Study	Comprehensive multi-omics integration identifies differentially active enhancers during human brain development with clinical relevance.	Genome medicine	Yousefi, Soheil; Deng, Ruizhi; Lanko, Kristina; Salsench, Eva Medico; Nikoncuk, Anita; van der Linde, Herma C; Perenthaler, Elena; van Ham, Tjakko J; Mulugeta, Eskeatnaf; Barakat, Tahsin Stefan	October 19, 2021	Not Determined
34663425	Create Study	DNA methylation-calling tools for Oxford Nanopore sequencing: a survey and human epigenome-wide evaluation.	Genome biology	Liu, Yang; Rosikiewicz, Wojciech; Pan, Ziwei; Jillette, Nathaniel; Wang, Ping; Taghbalout, Aziz; Foox, Jonathan; Mason, Christopher; Carroll, Martin; Cheng, Albert; Li, Sheng	October 18, 2021	Not Determined
34652256	Create Study	Spatiotemporal specificity of correlated DNA methylation and gene expression pairs across different human tissues and stages of brain development.	Epigenetics	Wang, Kangli; Dai, Rujia; Xia, Yan; Tian, Jianghua; Jiao, Chuan; Mikhailova, Tatiana; Zhang, Chunling; Chen, Chao; Liu, Chunyu	October 1, 2022	Not Determined
34646915	Create Study	Gene expression in the dorsolateral and ventromedial prefrontal cortices implicates immune-related gene networks in PTSD.	Neurobiology of stress	Logue, Mark W; Zhou, Zhenwei; Morrison, Filomene G; Wolf, Erika J; Daskalakis, Nikolaos P; Chatzinakos, Christos; Georgiadis, Foivos; Labadorf, Adam T; Girgenti, Matthew J; Young, Keith A; Williamson, Douglas E; Zhao, Xiang; Grenier, Jaclyn Garza; Traumatic Stress Brain Research Group; Huber, Bertrand Russell; Miller, Mark W	November 1, 2021	Not Determined
34632689	Create Study	Sites of active gene regulation in the prenatal frontal cortex and their role in neuropsychiatric disorders.	American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics	Kouakou, Manuela R; Cameron, Darren; Hannon, Eilis; Dempster, Emma L; Mill, Jonathan; Hill, Matthew J; Bray, Nicholas J	September 1, 2021	Not Determined
34616060	Create Study	Single-cell epigenomics reveals mechanisms of human cortical development.	Nature	Ziffra, Ryan S; Kim, Chang N; Ross, Jayden M; Wilfert, Amy; Turner, Tychele N; Haeussler, Maximilian; Casella, Alex M; Przytycki, Pawel F; Keough, Kathleen C; Shin, David; Bogdanoff, Derek; Kreimer, Anat; Pollard, Katherine S; Ament, Seth A; Eichler, Evan E; Ahituv, Nadav; Nowakowski, Tomasz J	October 1, 2021	Not Determined
34599306	Create Study	Hominini-specific regulation of CBLN2 increases prefrontal spinogenesis.	Nature	Shibata, Mikihito; Pattabiraman, Kartik; Muchnik, Sydney K; Kaur, Navjot; Morozov, Yury M; Cheng, Xiaoyang; Waxman, Stephen G; Sestan, Nenad	October 1, 2021	Not Determined
34599305	Create Study	Regulation of prefrontal patterning and connectivity by retinoic acid.	Nature	Shibata, Mikihito; Pattabiraman, Kartik; Lorente-Galdos, Belen; Andrijevic, David; Kim, Suel-Kee; Kaur, Navjot; Muchnik, Sydney K; Xing, Xiaojun; Santpere, Gabriel; Sousa, Andre M M; Sestan, Nenad	October 1, 2021	Not Determined
34584908	Create Study	From genetics to systems biology of stress-related mental disorders.	Neurobiology of stress	Dalvie, Shareefa; Chatzinakos, Chris; Al Zoubi, Obada; Georgiadis, Foivos; PGC-PTSD Systems Biology workgroup; Lancashire, Lee; Daskalakis, Nikolaos P	November 1, 2021	Not Determined
34545196	Create Study	Prefrontal cortex, amygdala, and threat processing: implications for PTSD.	Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology	Alexandra Kredlow, M; Fenster, Robert J; Laurent, Emma S; Ressler, Kerry J; Phelps, Elizabeth A	January 1, 2022	Not Determined
34536354	Create Study	Human microglia states are conserved across experimental models and regulate neural stem cell responses in chimeric organoids.	Cell stem cell	Popova, Galina; Soliman, Sarah S; Kim, Chang N; Keefe, Matthew G; Hennick, Kelsey M; Jain, Samhita; Li, Tao; Tejera, Dario; Shin, David; Chhun, Bryant B; McGinnis, Christopher S; Speir, Matthew; Gartner, Zev J; Mehta, Shalin B; Haeussler, Maximilian; Hengen, Keith B; Ransohoff, Richard R; Piao, Xianhua; Nowakowski, Tomasz J	December 2, 2021	Not Determined
34508786	Create Study	Multiomic biological approaches to the study of child abuse and neglect.	Pharmacology, biochemistry, and behavior	Layfield, Savannah Dee; Duffy, Lucie Anne; Phillips, Karlye Allison; Lardenoije, Roy; Klengel, Torsten; Ressler, Kerry J	November 1, 2021	Not Determined
34504351	Create Study	Performance assessment of DNA sequencing platforms in the ABRF Next-Generation Sequencing Study.	Nature biotechnology	Foox, Jonathan; Tighe, Scott W; Nicolet, Charles M; Zook, Justin M; Byrska-Bishop, Marta; Clarke, Wayne E; Khayat, Michael M; Mahmoud, Medhat; Laaguiby, Phoebe K; Herbert, Zachary T; Warner, Derek; Grills, George S; Jen, Jin; Levy, Shawn; Xiang, Jenny; Alonso, Alicia; Zhao, Xia; Zhang, Wenwei; Teng, Fei; Zhao, Yonggang; Lu, Haorong; Schroth, Gary P; Narzisi, Giuseppe; Farmerie, William; Sedlazeck, Fritz J; Baldwin, Don A; Mason, Christopher E	September 1, 2021	Not Determined
34497263	Create Study	Characterising the shared genetic determinants of bipolar disorder, schizophrenia and risk-taking.	Translational psychiatry	Hindley, Guy; Bahrami, Shahram; Steen, Nils Eiel; O'Connell, Kevin S; Frei, Oleksandr; Shadrin, Alexey; Bettella, Francesco; Rødevand, Linn; Fan, Chun C; Dale, Anders M; Djurovic, Srdjan; Smeland, Olav B; Andreassen, Ole A	September 8, 2021	Not Determined
34493831	Create Study	Induction of dopaminergic neurons for neuronal subtype-specific modeling of psychiatric disease risk.	Molecular psychiatry	Powell, Samuel K; O'Shea, Callan; Townsley, Kayla; Prytkova, Iya; Dobrindt, Kristina; Elahi, Rahat; Iskhakova, Marina; Lambert, Tova; Valada, Aditi; Liao, Will; Ho, Seok-Man; Slesinger, Paul A; Huckins, Laura M; Akbarian, Schahram; Brennand, Kristen J	May 1, 2023	Not Determined
34489590	Create Study	An updated guide for the perplexed: cytometry in the high-dimensional era.	Nature immunology	Liechti, Thomas; Weber, Lukas M; Ashhurst, Thomas M; Stanley, Natalie; Prlic, Martin; Van Gassen, Sofie; Mair, Florian	October 1, 2021	Not Determined
34483043	Create Study	Advances in profiling chromatin architecture shed light on the regulatory dynamics underlying brain disorders.	Seminars in cell & developmental biology	Pratt, Brandon M; Won, Hyejung	January 1, 2022	Not Determined
34478631	Create Study	Rewiring of human neurodevelopmental gene regulatory programs by human accelerated regions.	Neuron	Girskis, Kelly M; Stergachis, Andrew B; DeGennaro, Ellen M; Doan, Ryan N; Qian, Xuyu; Johnson, Matthew B; Wang, Peter P; Sejourne, Gabrielle M; Nagy, M Aurel; Pollina, Elizabeth A; Sousa, André M M; Shin, Taehwan; Kenny, Connor J; Scotellaro, Julia L; Debo, Brian M; Gonzalez, Dilenny M; Rento, Lariza M; Yeh, Rebecca C; Song, Janet H T; Beaudin, Marc; Fan, Jean; Kharchenko, Peter V; Sestan, Nenad; Greenberg, Michael E; Walsh, Christopher A	October 20, 2021	Not Determined
34469739	Create Study	Full-length isoform transcriptome of the developing human brain provides further insights into autism.	Cell reports	Chau, Kevin K; Zhang, Pan; Urresti, Jorge; Amar, Megha; Pramod, Akula Bala; Chen, Jiaye; Thomas, Amy; Corominas, Roser; Lin, Guan Ning; Iakoucheva, Lilia M	August 31, 2021	Not Determined
34446734	Create Study	Epigenetic inactivation of the autophagy-lysosomal system in appendix in Parkinson''s disease.	Nature communications	Gordevicius, Juozas; Li, Peipei; Marshall, Lee L; Killinger, Bryan A; Lang, Sean; Ensink, Elizabeth; Kuhn, Nathan C; Cui, Wei; Maroof, Nazia; Lauria, Roberta; Rueb, Christina; Siebourg-Polster, Juliane; Maliver, Pierre; Lamp, Jared; Vega, Irving; Manfredsson, Fredric P; Britschgi, Markus; Labrie, Viviane	August 26, 2021	Not Determined
34433407	Create Study	A pipeline for RNA-seq based eQTL analysis with automated quality control procedures.	BMC bioinformatics	Wang, Tao; Liu, Yongzhuang; Ruan, Junpeng; Dong, Xianjun; Wang, Yadong; Peng, Jiajie	August 25, 2021	Not Determined
34426698	Create Study	Identification of neural oscillations and epileptiform changes in human brain organoids.	Nature neuroscience	Samarasinghe, Ranmal A; Miranda, Osvaldo A; Buth, Jessie E; Mitchell, Simon; Ferando, Isabella; Watanabe, Momoko; Allison, Thomas F; Kurdian, Arinnae; Fotion, Namie N; Gandal, Michael J; Golshani, Peyman; Plath, Kathrin; Lowry, William E; Parent, Jack M; Mody, Istvan; Novitch, Bennett G	October 1, 2021	Not Determined
34425903	Create Study	Developmental dynamics of voltage-gated sodium channel isoform expression in the human and mouse brain.	Genome medicine	Liang, Lindsay; Fazel Darbandi, Siavash; Pochareddy, Sirisha; Gulden, Forrest O; Gilson, Michael C; Sheppard, Brooke K; Sahagun, Atehsa; An, Joon-Yong; Werling, Donna M; Rubenstein, John L R; Sestan, Nenad; Bender, Kevin J; Sanders, Stephan J	August 23, 2021	Not Determined
34416157	Create Study	Brain-trait-associated variants impact cell-type-specific gene regulation during neurogenesis.	American journal of human genetics	Aygün, Nil; Elwell, Angela L; Liang, Dan; Lafferty, Michael J; Cheek, Kerry E; Courtney, Kenan P; Mory, Jessica; Hadden-Ford, Ellie; Krupa, Oleh; de la Torre-Ubieta, Luis; Geschwind, Daniel H; Love, Michael I; Stein, Jason L	September 2, 2021	Not Determined
34413513	Create Study	A human forebrain organoid model of fragile X syndrome exhibits altered neurogenesis and highlights new treatment strategies.	Nature neuroscience	Kang, Yunhee; Zhou, Ying; Li, Yujing; Han, Yanfei; Xu, Jie; Niu, Weibo; Li, Ziyi; Liu, Shiying; Feng, Hao; Huang, Wen; Duan, Ranhui; Xu, Tianmin; Raj, Nisha; Zhang, Feiran; Dou, Juan; Xu, Chongchong; Wu, Hao; Bassell, Gary J; Warren, Stephen T; Allen, Emily G; Jin, Peng; Wen, Zhexing	October 1, 2021	Not Determined
34411509	Create Study	A convergent molecular network underlying autism and congenital heart disease.	Cell systems	Rosenthal, Sara Brin; Willsey, Helen Rankin; Xu, Yuxiao; Mei, Yuan; Dea, Jeanselle; Wang, Sheng; Curtis, Charlotte; Sempou, Emily; Khokha, Mustafa K; Chi, Neil C; Willsey, Arthur Jeremy; Fisch, Kathleen M; Ideker, Trey	November 17, 2021	Not Determined
34332145	Create Study	Direct reprogramming induces vascular regeneration post muscle ischemic injury.	Molecular therapy : the journal of the American Society of Gene Therapy	Kaur, Keerat; Hadas, Yoav; Kurian, Ann Anu; Żak, Magdalena M; Yoo, Jimeen; Mahmood, Asharee; Girard, Hanna; Komargodski, Rinat; Io, Toshiro; Santini, Maria Paola; Sultana, Nishat; Sharkar, Mohammad Tofael Kabir; Magadum, Ajit; Fargnoli, Anthony; Yoon, Seonghun; Chepurko, Elena; Chepurko, Vadim; Eliyahu, Efrat; Pinto, Dalila; Lebeche, Djamel; Kovacic, Jason C; Hajjar, Roger J; Rafii, Shahin; Zangi, Lior	October 6, 2021	Not Determined
34323598	Create Study	DNA methylation differences in cortical grey and white matter in schizophrenia.	Epigenomics	Berdenis van Berlekom, Amber; Notman, Nina; Sneeboer, Marjolein Am; Snijders, Gijsje Jlj; Houtepen, Lotte C; Nispeling, Danny M; He, Yujie; Dracheva, Stella; Hol, Elly M; Kahn, René S; de Witte, Lot D; Boks, Marco P; Psychiatric Donor Program of the Netherlands Brain Bank (NBB-PSY)	August 1, 2021	Not Determined
34294919	Create Study	Coexpression network architecture reveals the brain-wide and multiregional basis of disease susceptibility.	Nature neuroscience	Hartl, Christopher L; Ramaswami, Gokul; Pembroke, William G; Muller, Sandrine; Pintacuda, Greta; Saha, Ashis; Parsana, Princy; Battle, Alexis; Lage, Kasper; Geschwind, Daniel H	September 1, 2021	Not Determined
34230929	Create Study	Betacoronavirus-specific alternate splicing.	bioRxiv : the preprint server for biology	Karlebach, Guy; Aronow, Bruce; Baylin, Stephen B; Butler, Daniel; Foox, Jonathan; Levy, Shawn; Meydan, Cem; Mozsary, Christopher; Saravia-Butler, Amanda M; Taylor, Deanne M; Wurtele, Eve; Mason, Christopher E; Beheshti, Afshin; Robinson, Peter N	July 2, 2021	Not Determined
34188182	Create Study	Transcriptome-wide association study of post-trauma symptom trajectories identified GRIN3B as a potential biomarker for PTSD development.	Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology	Lori, Adriana; Schultebraucks, Katharina; Galatzer-Levy, Isaac; Daskalakis, Nikolaos P; Katrinli, Seyma; Smith, Alicia K; Myers, Amanda J; Richholt, Ryan; Huentelman, Matthew; Guffanti, Guia; Wuchty, Stefan; Gould, Felicia; Harvey, Philip D; Nemeroff, Charles B; Jovanovic, Tanja; Gerasimov, Ekaterina S; Maples-Keller, Jessica L; Stevens, Jennifer S; Michopoulos, Vasiliki; Rothbaum, Barbara O; Wingo, Aliza P; Ressler, Kerry J	September 1, 2021	Not Determined
34172755	Create Study	Neuronal and glial 3D chromatin architecture informs the cellular etiology of brain disorders.	Nature communications	Hu, Benxia; Won, Hyejung; Mah, Won; Park, Royce B; Kassim, Bibi; Spiess, Keeley; Kozlenkov, Alexey; Crowley, Cheynna A; Pochareddy, Sirisha; PsychENCODE Consortium; Li, Yun; Dracheva, Stella; Sestan, Nenad; Akbarian, Schahram; Geschwind, Daniel H	June 25, 2021	Not Determined
34162698	Create Study	Haplotype diversity and sequence heterogeneity of human telomeres.	Genome research	Grigorev, Kirill; Foox, Jonathan; Bezdan, Daniela; Butler, Daniel; Luxton, Jared J; Reed, Jake; McKenna, Miles J; Taylor, Lynn; George, Kerry A; Meydan, Cem; Bailey, Susan M; Mason, Christopher E	July 1, 2021	Not Determined
34161768	Create Study	Transcriptional repression by FEZF2 restricts alternative identities of cortical projection neurons.	Cell reports	Tsyporin, Jeremiah; Tastad, David; Ma, Xiaokuang; Nehme, Antoine; Finn, Thomas; Huebner, Liora; Liu, Guoping; Gallardo, Daisy; Makhamreh, Amr; Roberts, Jacqueline M; Katzman, Solomon; Sestan, Nenad; McConnell, Susan K; Yang, Zhengang; Qiu, Shenfeng; Chen, Bin	June 22, 2021	Not Determined
34154796	Create Study	Sex Differences in the Human Brain Transcriptome of Cases With Schizophrenia.	Biological psychiatry	Hoffman, Gabriel E; Ma, Yixuan; Montgomery, Kelsey S; Bendl, Jaroslav; Jaiswal, Manoj Kumar; Kozlenkov, Alex; Peters, Mette A; Dracheva, Stella; Fullard, John F; Chess, Andrew; Devlin, Bernie; Sieberts, Solveig K; Roussos, Panos	January 1, 2022	Not Determined
34140698	Create Study	Spatial and cell type transcriptional landscape of human cerebellar development.	Nature neuroscience	Aldinger, Kimberly A; Thomson, Zachary; Phelps, Ian G; Haldipur, Parthiv; Deng, Mei; Timms, Andrew E; Hirano, Matthew; Santpere, Gabriel; Roco, Charles; Rosenberg, Alexander B; Lorente-Galdos, Belen; Gulden, Forrest O; O'Day, Diana; Overman, Lynne M; Lisgo, Steven N; Alexandre, Paula; Sestan, Nenad; Doherty, Dan; Dobyns, William B; Seelig, Georg; Glass, Ian A; Millen, Kathleen J	August 1, 2021	Not Determined
34140357	Create Study	Common genetic variation influencing human white matter microstructure.	Science (New York, N.Y.)	Zhao, Bingxin; Li, Tengfei; Yang, Yue; Wang, Xifeng; Luo, Tianyou; Shan, Yue; Zhu, Ziliang; Xiong, Di; Hauberg, Mads E; Bendl, Jaroslav; Fullard, John F; Roussos, Panagiotis; Li, Yun; Stein, Jason L; Zhu, Hongtu	June 18, 2021	Not Determined
34125905	Create Study	Cell type hierarchy reconstruction via reconciliation of multi-resolution cluster tree.	Nucleic acids research	Peng, Minshi; Wamsley, Brie; Elkins, Andrew G; Geschwind, Daniel H; Wei, Yuting; Roeder, Kathryn	September 20, 2021	Not Determined
34100031	Create Study	IL10RB as a key regulator of COVID-19 host susceptibility and severity.	medRxiv : the preprint server for health sciences	Voloudakis, Georgios; Hoffman, Gabriel; Venkatesh, Sanan; Lee, Kyung Min; Dobrindt, Kristina; Vicari, James M; Zhang, Wen; Beckmann, Noam D; Jiang, Shan; Hoagland, Daisy; Bian, Jiantao; Gao, Lina; Corvelo, André; Cho, Kelly; Lee, Jennifer S; Iyengar, Sudha K; Luoh, Shiuh-Wen; Akbarian, Schahram; Striker, Robert; Assimes, Themistocles L; Schadt, Eric E; Merad, Miriam; tenOever, Benjamin R; Charney, Alexander W; Mount Sinai COVID-19 Biobank; VA Million Veteran Program COVID-19 Science Initiative; Brennand, Kristen J; Lynch, Julie A; Fullard, John F; Roussos, Panos	June 2, 2021	Not Determined
34077736	Create Study	Mineralocorticoid receptors dampen glucocorticoid receptor sensitivity to stress via regulation of FKBP5.	Cell reports	Hartmann, Jakob; Bajaj, Thomas; Klengel, Claudia; Chatzinakos, Chris; Ebert, Tim; Dedic, Nina; McCullough, Kenneth M; Lardenoije, Roy; Joëls, Marian; Meijer, Onno C; McCann, Katharine E; Dudek, Serena M; Sarabdjitsingh, R Angela; Daskalakis, Nikolaos P; Klengel, Torsten; Gassen, Nils C; Schmidt, Mathias V; Ressler, Kerry J	June 1, 2021	Not Determined
34054421	Create Study	Drug Response-Related DNA Methylation Changes in Schizophrenia, Bipolar Disorder, and Major Depressive Disorder.	Frontiers in neuroscience	Zhou, Jiaqi; Li, Miao; Wang, Xueying; He, Yuwen; Xia, Yan; Sweeney, John A; Kopp, Richard F; Liu, Chunyu; Chen, Chao	January 1, 2021	Not Determined
34044854	Create Study	scGRNom: a computational pipeline of integrative multi-omics analyses for predicting cell-type disease genes and regulatory networks.	Genome medicine	Jin, Ting; Rehani, Peter; Ying, Mufang; Huang, Jiawei; Liu, Shuang; Roussos, Panagiotis; Wang, Daifeng	May 27, 2021	Not Determined
34039416	Create Study	Characterization of the public transit air microbiome and resistome reveals geographical specificity.	Microbiome	Leung, M H Y; Tong, X; Bøifot, K O; Bezdan, D; Butler, D J; Danko, D C; Gohli, J; Green, D C; Hernandez, M T; Kelly, F J; Levy, S; Mason-Buck, G; Nieto-Caballero, M; Syndercombe-Court, D; Udekwu, K; Young, B G; Mason, C E; Dybwad, M; Lee, P K H	May 26, 2021	Not Determined
34035472	Create Study	Identifying nootropic drug targets via large-scale cognitive GWAS and transcriptomics.	Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology	Lam, Max; Chen, Chia-Yen; Ge, Tian; Xia, Yan; Hill, David W; Trampush, Joey W; Yu, Jin; Knowles, Emma; Davies, Gail; Stahl, Eli A; Huckins, Laura; Liewald, David C; Djurovic, Srdjan; Melle, Ingrid; Christoforou, Andrea; Reinvang, Ivar; DeRosse, Pamela; Lundervold, Astri J; Steen, Vidar M; Espeseth, Thomas; Räikkönen, Katri; Widen, Elisabeth; Palotie, Aarno; Eriksson, Johan G; Giegling, Ina; Konte, Bettina; Hartmann, Annette M; Roussos, Panos; Giakoumaki, Stella; Burdick, Katherine E; Payton, Antony; Ollier, William; Chiba-Falek, Ornit; Koltai, Deborah C; Need, Anna C; Cirulli, Elizabeth T; Voineskos, Aristotle N; Stefanis, Nikos C; Avramopoulos, Dimitrios; Hatzimanolis, Alex; Smyrnis, Nikolaos; Bilder, Robert M; Freimer, Nelson B; Cannon, Tyrone D; London, Edythe; Poldrack, Russell A; Sabb, Fred W; Congdon, Eliza; Conley, Emily Drabant; Scult, Matthew A; Dickinson, Dwight; Straub, Richard E; Donohoe, Gary; Morris, Derek; Corvin, Aiden; Gill, Michael; Hariri, Ahmad R; Weinberger, Daniel R; Pendleton, Neil; Bitsios, Panos; Rujescu, Dan; Lahti, Jari; Le Hellard, Stephanie; Keller, Matthew C; Andreassen, Ole A; Deary, Ian J; Glahn, David C; Huang, Hailiang; Liu, Chunyu; Malhotra, Anil K; Lencz, Todd	September 1, 2021	Not Determined
34019542	Create Study	Leveraging eQTLs to identify individual-level tissue of interest for a complex trait.	PLoS computational biology	Majumdar, Arunabha; Giambartolomei, Claudia; Cai, Na; Haldar, Tanushree; Schwarz, Tommer; Gandal, Michael; Flint, Jonathan; Pasaniuc, Bogdan	May 1, 2021	Not Determined
34017130	Create Study	Cell-type-specific effects of genetic variation on chromatin accessibility during human neuronal differentiation.	Nature neuroscience	Liang, Dan; Elwell, Angela L; Aygün, Nil; Krupa, Oleh; Wolter, Justin M; Kyere, Felix A; Lafferty, Michael J; Cheek, Kerry E; Courtney, Kenan P; Yusupova, Marianna; Garrett, Melanie E; Ashley-Koch, Allison; Crawford, Gregory E; Love, Michael I; de la Torre-Ubieta, Luis; Geschwind, Daniel H; Stein, Jason L	July 1, 2021	Not Determined
33997155	Create Study	Genomic factors underlying sex differences in trauma-related disorders.	Neurobiology of stress	Ponomareva, Olga Y; Ressler, Kerry J	May 1, 2021	Not Determined
33969380	Create Study	Review of multi-omics data resources and integrative analysis for human brain disorders.	Briefings in functional genomics	Dong, Xianjun; Liu, Chunyu; Dozmorov, Mikhail	July 17, 2021	Not Determined
33958802	Create Study	Brain gene co-expression networks link complement signaling with convergent synaptic pathology in schizophrenia.	Nature neuroscience	Kim, Minsoo; Haney, Jillian R; Zhang, Pan; Hernandez, Leanna M; Wang, Lee-Kai; Perez-Cano, Laura; Loohuis, Loes M Olde; de la Torre-Ubieta, Luis; Gandal, Michael J	June 1, 2021	Not Determined
33947435	Create Study	Genome-wide histone acetylation analysis reveals altered transcriptional regulation in the Parkinson''s disease brain.	Molecular neurodegeneration	Toker, Lilah; Tran, Gia T; Sundaresan, Janani; Tysnes, Ole-Bjørn; Alves, Guido; Haugarvoll, Kristoffer; Nido, Gonzalo S; Dölle, Christian; Tzoulis, Charalampos	May 5, 2021	Not Determined
33934884	Create Study	Sex Differences in Molecular Rhythms in the Human Cortex.	Biological psychiatry	Logan, Ryan W; Xue, Xiangning; Ketchesin, Kyle D; Hoffman, Gabriel; Roussos, Panos; Tseng, George; McClung, Colleen A; Seney, Marianne L	January 1, 2022	Not Determined
33909211	Create Study	Case Report: Association of Comorbid Psychiatric Disorders and Sigmoid Prolapse with de novo POGZ Mutation.	Journal of autism and developmental disorders	Wright, Cary M; Guter, Stephen J; Cook, Edwin H	March 1, 2022	Not Determined
33904573	Create Study	Identification of cell-type-specific marker genes from co-expression patterns in tissue samples.	Bioinformatics (Oxford, England)	Qiu, Yixuan; Wang, Jiebiao; Lei, Jing; Roeder, Kathryn	October 11, 2021	Not Determined
33902714	Create Study	Performance evaluation of high-volume electret filter air samplers in aerosol microbiome research.	Environmental microbiome	Bøifot, Kari Oline; Gohli, Jostein; Skogan, Gunnar; Dybwad, Marius	July 28, 2020	Not Determined
33893716	Create Study	Integration of evidence across human and model organism studies: A meeting report.	Genes, brain, and behavior	Palmer, Rohan H C; Johnson, Emma C; Won, Hyejung; Polimanti, Renato; Kapoor, Manav; Chitre, Apurva; Bogue, Molly A; Benca-Bachman, Chelsie E; Parker, Clarissa C; Verma, Anurag; Reynolds, Timothy; Ernst, Jason; Bray, Michael; Kwon, Soo Bin; Lai, Dongbing; Quach, Bryan C; Gaddis, Nathan C; Saba, Laura; Chen, Hao; Hawrylycz, Michael; Zhang, Shan; Zhou, Yuan; Mahaffey, Spencer; Fischer, Christian; Sanchez-Roige, Sandra; Bandrowski, Anita; Lu, Qing; Shen, Li; Philip, Vivek; Gelernter, Joel; Bierut, Laura J; Hancock, Dana B; Edenberg, Howard J; Johnson, Eric O; Nestler, Eric J; Barr, Peter B; Prins, Pjotr; Smith, Desmond J; Akbarian, Schahram; Thorgeirsson, Thorgeir; Walton, Dave; Baker, Erich; Jacobson, Daniel; Palmer, Abraham A; Miles, Michael; Chesler, Elissa J; Emerson, Jake; Agrawal, Arpana; Martone, Maryann; Williams, Robert W	April 23, 2021	Not Determined
33885362	Create Study	The cis-regulatory effects of modern human-specific variants.	eLife	Weiss, Carly V; Harshman, Lana; Inoue, Fumitaka; Fraser, Hunter B; Petrov, Dmitri A; Ahituv, Nadav; Gokhman, David	April 22, 2021	Not Determined
33863995	Create Study	FXR1 regulation of parvalbumin interneurons in the prefrontal cortex is critical for schizophrenia-like behaviors.	Molecular psychiatry	Shen, Minjie; Guo, Yu; Dong, Qiping; Gao, Yu; Stockton, Michael E; Li, Meng; Kannan, Sudharsan; Korabelnikov, Tomer; Schoeller, Keegan A; Sirois, Carissa L; Zhou, Chen; Le, Jonathan; Wang, Daifeng; Chang, Qiang; Sun, Qian-Quan; Zhao, Xinyu	November 1, 2021	Not Determined
33846625	Create Study	Brain proteome-wide association study implicates novel proteins in depression pathogenesis.	Nature neuroscience	Wingo, Thomas S; Liu, Yue; Gerasimov, Ekaterina S; Gockley, Jake; Logsdon, Benjamin A; Duong, Duc M; Dammer, Eric B; Lori, Adriana; Kim, Paul J; Ressler, Kerry J; Beach, Thomas G; Reiman, Eric M; Epstein, Michael P; De Jager, Philip L; Lah, James J; Bennett, David A; Seyfried, Nicholas T; Levey, Allan I; Wingo, Aliza P	June 1, 2021	Not Determined
33833052	Create Study	A model and test for coordinated polygenic epistasis in complex traits.	Proceedings of the National Academy of Sciences of the United States of America	Sheppard, Brooke; Rappoport, Nadav; Loh, Po-Ru; Sanders, Stephan J; Zaitlen, Noah; Dahl, Andy	April 13, 2021	Not Determined
33795001	Create Study	A comprehensive metagenomics framework to characterize organisms relevant for planetary protection.	Microbiome	Danko, David C; Sierra, Maria A; Benardini, James N; Guan, Lisa; Wood, Jason M; Singh, Nitin; Seuylemezian, Arman; Butler, Daniel J; Ryon, Krista; Kuchin, Katerina; Meleshko, Dmitry; Bhattacharya, Chandrima; Venkateswaran, Kasthuri J; Mason, Christopher E	April 1, 2021	Not Determined
33767611	Create Study	The Perils of Navigating Activity-Dependent Alternative Splicing of Neurexins.	Frontiers in molecular neuroscience	Liakath-Ali, Kif; Südhof, Thomas C	January 1, 2021	Not Determined
33712587	Create Study	Shotgun transcriptome, spatial omics, and isothermal profiling of SARS-CoV-2 infection reveals unique host responses, viral diversification, and drug interactions.	Nature communications	Butler, Daniel; Mozsary, Christopher; Meydan, Cem; Foox, Jonathan; Rosiene, Joel; Shaiber, Alon; Danko, David; Afshinnekoo, Ebrahim; MacKay, Matthew; Sedlazeck, Fritz J; Ivanov, Nikolay A; Sierra, Maria; Pohle, Diana; Zietz, Michael; Gisladottir, Undina; Ramlall, Vijendra; Sholle, Evan T; Schenck, Edward J; Westover, Craig D; Hassan, Ciaran; Ryon, Krista; Young, Benjamin; Bhattacharya, Chandrima; Ng, Dianna L; Granados, Andrea C; Santos, Yale A; Servellita, Venice; Federman, Scot; Ruggiero, Phyllis; Fungtammasan, Arkarachai; Chin, Chen-Shan; Pearson, Nathaniel M; Langhorst, Bradley W; Tanner, Nathan A; Kim, Youngmi; Reeves, Jason W; Hether, Tyler D; Warren, Sarah E; Bailey, Michael; Gawrys, Justyna; Meleshko, Dmitry; Xu, Dong; Couto-Rodriguez, Mara; Nagy-Szakal, Dorottya; Barrows, Joseph; Wells, Heather; O'Hara, Niamh B; Rosenfeld, Jeffrey A; Chen, Ying; Steel, Peter A D; Shemesh, Amos J; Xiang, Jenny; Thierry-Mieg, Jean; Thierry-Mieg, Danielle; Iftner, Angelika; Bezdan, Daniela; Sanchez, Elizabeth; Campion Jr, Thomas R; Sipley, John; Cong, Lin; Craney, Arryn; Velu, Priya; Melnick, Ari M; Shapira, Sagi; Hajirasouliha, Iman; Borczuk, Alain; Iftner, Thomas; Salvatore, Mirella; Loda, Massimo; Westblade, Lars F; Cushing, Melissa; Wu, Shixiu; Levy, Shawn; Chiu, Charles; Schwartz, Robert E; Tatonetti, Nicholas; Rennert, Hanna; Imielinski, Marcin; Mason, Christopher E	March 12, 2021	Not Determined
33684137	Create Study	MOSTWAS: Multi-Omic Strategies for Transcriptome-Wide Association Studies.	PLoS genetics	Bhattacharya, Arjun; Li, Yun; Love, Michael I	March 1, 2021	Not Determined
33658382	Create Study	Integration and transfer learning of single-cell transcriptomes via cFIT.	Proceedings of the National Academy of Sciences of the United States of America	Peng, Minshi; Li, Yue; Wamsley, Brie; Wei, Yuting; Roeder, Kathryn	March 9, 2021	Not Determined
33657363	Create Study	Post-transcriptional regulation of antiviral gene expression by N6-methyladenosine.	Cell reports	McFadden, Michael J; McIntyre, Alexa B R; Mourelatos, Haralambos; Abell, Nathan S; Gokhale, Nandan S; Ipas, Hélène; Xhemalçe, Blerta; Mason, Christopher E; Horner, Stacy M	March 2, 2021	Not Determined
33636110	Create Study	Common Genetic Variation in Humans Impacts In Vitro Susceptibility to SARS-CoV-2 Infection.	Stem cell reports	Dobrindt, Kristina; Hoagland, Daisy A; Seah, Carina; Kassim, Bibi; O'Shea, Callan P; Murphy, Aleta; Iskhakova, Marina; Fernando, Michael B; Powell, Samuel K; Deans, P J Michael; Javidfar, Ben; Peter, Cyril; Møller, Rasmus; Uhl, Skyler A; Garcia, Meilin Fernandez; Kimura, Masaki; Iwasawa, Kentaro; Crary, John F; Kotton, Darrell N; Takebe, Takanori; Huckins, Laura M; tenOever, Benjamin R; Akbarian, Schahram; Brennand, Kristen J	March 9, 2021	Not Determined
33628435	Create Study	netDx: Software for building interpretable patient classifiers by multi-''omic data integration using patient similarity networks.	F1000Research	Pai, Shraddha; Weber, Philipp; Isserlin, Ruth; Kaka, Hussam; Hui, Shirley; Shah, Muhammad Ahmad; Giudice, Luca; Giugno, Rosalba; Nøhr, Anne Krogh; Baumbach, Jan; Bader, Gary D	January 1, 2020	Not Determined
33603232	Create Study	Publisher Correction: Transcriptome-scale spatial gene expression in the human dorsolateral prefrontal cortex.	Nature neuroscience	Maynard, Kristen R; Collado-Torres, Leonardo; Weber, Lukas M; Uytingco, Cedric; Barry, Brianna K; Williams, Stephen R; Catallini 2nd, Joseph L; Tran, Matthew N; Besich, Zachary; Tippani, Madhavi; Chew, Jennifer; Yin, Yifeng; Kleinman, Joel E; Hyde, Thomas M; Rao, Nikhil; Hicks, Stephanie C; Martinowich, Keri; Jaffe, Andrew E	April 1, 2021	Not Determined
33583425	Create Study	CellWalker integrates single-cell and bulk data to resolve regulatory elements across cell types in complex tissues.	Genome biology	Przytycki, Pawel F; Pollard, Katherine S	February 14, 2021	Not Determined
33576176	Create Study	Increasing the resolution and precision of psychiatric genome-wide association studies by re-imputing summary statistics using a large, diverse reference panel.	American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics	Chatzinakos, Chris; Lee, Donghyung; Cai, Na; Vladimirov, Vladimir I; Webb, Bradley T; Riley, Brien P; Flint, Jonathan; Kendler, Kenneth S; Ressler, Kerry J; Daskalakis, Nikolaos P; Bacanu, Silviu-Alin	January 1, 2021	Not Determined
33570495	Create Study	Constructing and optimizing 3D atlases from 2D data with application to the developing mouse brain.	eLife	Young, David M; Fazel Darbandi, Siavash; Schwartz, Grace; Bonzell, Zachary; Yuruk, Deniz; Nojima, Mai; Gole, Laurent C; Rubenstein, John Lr; Yu, Weimiao; Sanders, Stephan J	February 11, 2021	Not Determined
33558695	Create Study	Transcriptome-scale spatial gene expression in the human dorsolateral prefrontal cortex.	Nature neuroscience	Maynard, Kristen R; Collado-Torres, Leonardo; Weber, Lukas M; Uytingco, Cedric; Barry, Brianna K; Williams, Stephen R; Catallini 2nd, Joseph L; Tran, Matthew N; Besich, Zachary; Tippani, Madhavi; Chew, Jennifer; Yin, Yifeng; Kleinman, Joel E; Hyde, Thomas M; Rao, Nikhil; Hicks, Stephanie C; Martinowich, Keri; Jaffe, Andrew E	March 1, 2021	Not Determined
33521749	Create Study	Cell-free DNA tissues of origin by methylation profiling reveals significant cell, tissue, and organ-specific injury related to COVID-19 severity.	Med (New York, N.Y.)	Cheng, Alexandre Pellan; Cheng, Matthew Pellan; Gu, Wei; Sesing Lenz, Joan; Hsu, Elaine; Schurr, Erwin; Bourque, Guillaume; Bourgey, Mathieu; Ritz, Jerome; Marty, Francisco M; Chiu, Charles Y; Vinh, Donald C; De Vlaminck, Iwijn	April 9, 2021	Not Determined
33513360	Create Study	Cell-to-Cell Adhesion and Neurogenesis in Human Cortical Development: A Study Comparing 2D Monolayers with 3D Organoid Cultures.	Stem cell reports	Scuderi, Soraya; Altobelli, Giovanna G; Cimini, Vincenzo; Coppola, Gianfilippo; Vaccarino, Flora M	February 9, 2021	Not Determined
33471102	Create Study	SCAN-ATAC-Sim: a scalable and efficient method for simulating single-cell ATAC-seq data from bulk-tissue experiments.	Bioinformatics (Oxford, England)	Chen, Zhanlin; Zhang, Jing; Liu, Jason; Zhang, Zixuan; Zhu, Jiangqi; Lee, Donghoon; Xu, Min; Gerstein, Mark	July 19, 2021	Not Determined
33422639	Create Study	Maternal autoimmunity and inflammation are associated with childhood tics and obsessive-compulsive disorder: Transcriptomic data show common enriched innate immune pathways.	Brain, behavior, and immunity	Jones, Hannah F; Han, Velda X; Patel, Shrujna; Gloss, Brian S; Soler, Nicolette; Ho, Alvin; Sharma, Suvasini; Kothur, Kavitha; Nosadini, Margherita; Wienholt, Louise; Hardwick, Chris; Barnes, Elizabeth H; Lim, Jacqueline R; Alshammery, Sarah; Nielsen, Timothy C; Wong, Melanie; Hofer, Markus J; Nassar, Natasha; Gold, Wendy; Brilot, Fabienne; Mohammad, Shekeeb S; Dale, Russell C	May 1, 2021	Not Determined
33402207	Create Study	N6-methyladenosine dynamics in neurodevelopment and aging, and its potential role in Alzheimer''s disease.	Genome biology	Shafik, Andrew M; Zhang, Feiran; Guo, Zhenxing; Dai, Qing; Pajdzik, Kinga; Li, Yangping; Kang, Yunhee; Yao, Bing; Wu, Hao; He, Chuan; Allen, Emily G; Duan, Ranhui; Jin, Peng	January 5, 2021	Not Determined
33398186	Create Study	Quantum computing at the frontiers of biological sciences.	Nature methods	Emani, Prashant S; Warrell, Jonathan; Anticevic, Alan; Bekiranov, Stefan; Gandal, Michael; McConnell, Michael J; Sapiro, Guillermo; Aspuru-Guzik, Alán; Baker, Justin T; Bastiani, Matteo; Murray, John D; Sotiropoulos, Stamatios N; Taylor, Jacob; Senthil, Geetha; Lehner, Thomas; Gerstein, Mark B; Harrow, Aram W	July 1, 2021	Not Determined
33384012	Create Study	Autism Spectrum Disorder Genetics and the Search for Pathological Mechanisms.	The American journal of psychiatry	Manoli, Devanand S; State, Matthew W	January 1, 2021	Not Determined
33376973	Create Study	Cell-free DNA (cfDNA) and Exosome Profiling from a Year-Long Human Spaceflight Reveals Circulating Biomarkers.	iScience	Bezdan, Daniela; Grigorev, Kirill; Meydan, Cem; Pelissier Vatter, Fanny A; Cioffi, Michele; Rao, Varsha; MacKay, Matthew; Nakahira, Kiichi; Burnham, Philip; Afshinnekoo, Ebrahim; Westover, Craig; Butler, Daniel; Mozsary, Chris; Donahoe, Timothy; Foox, Jonathan; Mishra, Tejaswini; Lucotti, Serena; Rana, Brinda K; Melnick, Ari M; Zhang, Haiying; Matei, Irina; Kelsen, David; Yu, Kenneth; Lyden, David C; Taylor, Lynn; Bailey, Susan M; Snyder, Michael P; Garrett-Bakelman, Francine E; Ossowski, Stephan; De Vlaminck, Iwijn; Mason, Christopher E	December 18, 2020	Not Determined
33336201	Create Study	A New Era for Space Life Science: International Standards for Space Omics Processing.	Patterns (New York, N.Y.)	Rutter, Lindsay; Barker, Richard; Bezdan, Daniela; Cope, Henry; Costes, Sylvain V; Degoricija, Lovorka; Fisch, Kathleen M; Gabitto, Mariano I; Gebre, Samrawit; Giacomello, Stefania; Gilroy, Simon; Green, Stefan J; Mason, Christopher E; Reinsch, Sigrid S; Szewczyk, Nathaniel J; Taylor, Deanne M; Galazka, Jonathan M; Herranz, Raul; Muratani, Masafumi	December 11, 2020	Not Determined
33319166	Create Study	Transcriptional response modules characterize IL-1β and IL-6 activity in COVID-19.	iScience	Bell, Lucy C K; Meydan, Cem; Kim, Jacob; Foox, Jonathan; Butler, Daniel; Mason, Christopher E; Shapira, Sagi D; Noursadeghi, Mahdad; Pollara, Gabriele	January 22, 2021	Not Determined
33305308	Create Study	ECMarker: interpretable machine learning model identifies gene expression biomarkers predicting clinical outcomes and reveals molecular mechanisms of human disease in early stages.	Bioinformatics (Oxford, England)	Jin, Ting; Nguyen, Nam D; Talos, Flaminia; Wang, Daifeng	May 23, 2021	Not Determined
33299992	Create Study	Transcriptional response modules characterise IL-1β and IL-6 activity in COVID-19.	bioRxiv : the preprint server for biology	Bell, Lucy Ck; Meydan, Cem; Kim, Jacob; Foox, Jonathan; Butler, Daniel; Mason, Christopher E; Shapira, Sagi D; Noursadeghi, Mahdad; Pollara, Gabriele	December 3, 2020	Not Determined
33272361	Create Study	Polygenicity in Psychiatry-Like It or Not, We Have to Understand It.	Biological psychiatry	Gandal, Michael J; Geschwind, Daniel H	January 1, 2021	Not Determined
33246552	Create Study	Functional Genomics Identify a Regulatory Risk Variation rs4420550 in the 16p11.2 Schizophrenia-Associated Locus.	Biological psychiatry	Chang, Hong; Cai, Xin; Li, Hui-Juan; Liu, Wei-Peng; Zhao, Li-Juan; Zhang, Chu-Yi; Wang, Jun-Yang; Liu, Jie-Wei; Ma, Xiao-Lei; Wang, Lu; Yao, Yong-Gang; Luo, Xiong-Jian; Li, Ming; Xiao, Xiao	February 1, 2021	Not Determined
33242417	Create Study	Comprehensive Multi-omics Analysis Reveals Mitochondrial Stress as a Central Biological Hub for Spaceflight Impact.	Cell	da Silveira, Willian A; Fazelinia, Hossein; Rosenthal, Sara Brin; Laiakis, Evagelia C; Kim, Man S; Meydan, Cem; Kidane, Yared; Rathi, Komal S; Smith, Scott M; Stear, Benjamin; Ying, Yue; Zhang, Yuanchao; Foox, Jonathan; Zanello, Susana; Crucian, Brian; Wang, Dong; Nugent, Adrienne; Costa, Helio A; Zwart, Sara R; Schrepfer, Sonja; Elworth, R A Leo; Sapoval, Nicolae; Treangen, Todd; MacKay, Matthew; Gokhale, Nandan S; Horner, Stacy M; Singh, Larry N; Wallace, Douglas C; Willey, Jeffrey S; Schisler, Jonathan C; Meller, Robert; McDonald, J Tyson; Fisch, Kathleen M; Hardiman, Gary; Taylor, Deanne; Mason, Christopher E; Costes, Sylvain V; Beheshti, Afshin	November 25, 2020	Not Determined
33242416	Create Study	Fundamental Biological Features of Spaceflight: Advancing the Field to Enable Deep-Space Exploration.	Cell	Afshinnekoo, Ebrahim; Scott, Ryan T; MacKay, Matthew J; Pariset, Eloise; Cekanaviciute, Egle; Barker, Richard; Gilroy, Simon; Hassane, Duane; Smith, Scott M; Zwart, Sara R; Nelman-Gonzalez, Mayra; Crucian, Brian E; Ponomarev, Sergey A; Orlov, Oleg I; Shiba, Dai; Muratani, Masafumi; Yamamoto, Masayuki; Richards, Stephanie E; Vaishampayan, Parag A; Meydan, Cem; Foox, Jonathan; Myrrhe, Jacqueline; Istasse, Eric; Singh, Nitin; Venkateswaran, Kasthuri; Keune, Jessica A; Ray, Hami E; Basner, Mathias; Miller, Jack; Vitaterna, Martha Hotz; Taylor, Deanne M; Wallace, Douglas; Rubins, Kathleen; Bailey, Susan M; Grabham, Peter; Costes, Sylvain V; Mason, Christopher E; Beheshti, Afshin	November 25, 2020	Not Determined
33242410	Create Study	Circulating miRNA Spaceflight Signature Reveals Targets for Countermeasure Development.	Cell reports	Malkani, Sherina; Chin, Christopher R; Cekanaviciute, Egle; Mortreux, Marie; Okinula, Hazeem; Tarbier, Marcel; Schreurs, Ann-Sofie; Shirazi-Fard, Yasaman; Tahimic, Candice G T; Rodriguez, Deyra N; Sexton, Brittany S; Butler, Daniel; Verma, Akanksha; Bezdan, Daniela; Durmaz, Ceyda; MacKay, Matthew; Melnick, Ari; Meydan, Cem; Li, Sheng; Garrett-Bakelman, Francine; Fromm, Bastian; Afshinnekoo, Ebrahim; Langhorst, Brad W; Dimalanta, Eileen T; Cheng-Campbell, Margareth; Blaber, Elizabeth; Schisler, Jonathan C; Vanderburg, Charles; Friedländer, Marc R; McDonald, J Tyson; Costes, Sylvain V; Rutkove, Seward; Grabham, Peter; Mason, Christopher E; Beheshti, Afshin	December 8, 2020	Not Determined
33242408	Create Study	Multi-omic, Single-Cell, and Biochemical Profiles of Astronauts Guide Pharmacological Strategies for Returning to Gravity.	Cell reports	Gertz, Monica L; Chin, Christopher R; Tomoiaga, Delia; MacKay, Matthew; Chang, Christina; Butler, Daniel; Afshinnekoo, Ebrahim; Bezdan, Daniela; Schmidt, Michael A; Mozsary, Christopher; Melnick, Ari; Garrett-Bakelman, Francine; Crucian, Brian; Lee, Stuart M C; Zwart, Sara R; Smith, Scott M; Meydan, Cem; Mason, Christopher E	December 8, 2020	Not Determined
33158872	Create Study	Transcriptional priming as a conserved mechanism of lineage diversification in the developing mouse and human neocortex.	Science advances	Li, Zhen; Tyler, William A; Zeldich, Ella; Santpere Baró, Gabriel; Okamoto, Mayumi; Gao, Tianliuyun; Li, Mingfeng; Sestan, Nenad; Haydar, Tarik F	November 1, 2020	Not Determined
33135072	Create Study	Complete deconvolution of DNA methylation signals from complex tissues: a geometric approach.	Bioinformatics (Oxford, England)	Zhang, Weiwei; Wu, Hao; Li, Ziyi	May 23, 2021	Not Determined
33131715	Create Study	Parsing the Functional Impact of Noncoding Genetic Variants in the Brain Epigenome.	Biological psychiatry	Powell, Samuel K; O'Shea, Callan; Brennand, Kristen J; Akbarian, Schahram	January 1, 2021	Not Determined
33109720	Create Study	Evolution of regulatory signatures in primate cortical neurons at cell-type resolution.	Proceedings of the National Academy of Sciences of the United States of America	Kozlenkov, Alexey; Vermunt, Marit W; Apontes, Pasha; Li, Junhao; Hao, Ke; Sherwood, Chet C; Hof, Patrick R; Ely, John J; Wegner, Michael; Mukamel, Eran A; Creyghton, Menno P; Koonin, Eugene V; Dracheva, Stella	November 10, 2020	Not Determined
33057013	Create Study	Genome-wide translational profiling of amygdala Crh-expressing neurons reveals role for CREB in fear extinction learning.	Nature communications	McCullough, Kenneth M; Chatzinakos, Chris; Hartmann, Jakob; Missig, Galen; Neve, Rachael L; Fenster, Robert J; Carlezon Jr, William A; Daskalakis, Nikolaos P; Ressler, Kerry J	October 14, 2020	Not Determined
33046894	Create Study	A systematic evaluation of the design and context dependencies of massively parallel reporter assays.	Nature methods	Klein, Jason C; Agarwal, Vikram; Inoue, Fumitaka; Keith, Aidan; Martin, Beth; Kircher, Martin; Ahituv, Nadav; Shendure, Jay	November 1, 2020	Not Determined
33046718	Create Study	Large eQTL meta-analysis reveals differing patterns between cerebral cortical and cerebellar brain regions.	Scientific data	Sieberts, Solveig K; Perumal, Thanneer M; Carrasquillo, Minerva M; Allen, Mariet; Reddy, Joseph S; Hoffman, Gabriel E; Dang, Kristen K; Calley, John; Ebert, Philip J; Eddy, James; Wang, Xue; Greenwood, Anna K; Mostafavi, Sara; CommonMind Consortium (CMC); The AMP-AD Consortium; Omberg, Larsson; Peters, Mette A; Logsdon, Benjamin A; De Jager, Philip L; Ertekin-Taner, Nilüfer; Mangravite, Lara M	October 12, 2020	Not Determined
33031552	Create Study	Varmole: a biologically drop-connect deep neural network model for prioritizing disease risk variants and genes.	Bioinformatics (Oxford, England)	Nguyen, Nam D; Jin, Ting; Wang, Daifeng	July 19, 2021	Not Determined
33020666	Create Study	A unified framework for joint-tissue transcriptome-wide association and Mendelian randomization analysis.	Nature genetics	Zhou, Dan; Jiang, Yi; Zhong, Xue; Cox, Nancy J; Liu, Chunyu; Gamazon, Eric R	November 1, 2020	Not Determined
33012681	Create Study	Acute Posttraumatic Symptoms Are Associated With Multimodal Neuroimaging Structural Covariance Patterns: A Possible Role for the Neural Substrates of Visual Processing in Posttraumatic Stress Disorder.	Biological psychiatry. Cognitive neuroscience and neuroimaging	Harnett, Nathaniel G; Stevens, Jennifer S; Fani, Negar; van Rooij, Sanne J H; Ely, Timothy D; Michopoulos, Vasiliki; Hudak, Lauren; Rothbaum, Alex O; Hinrichs, Rebecca; Winters, Sterling J; Jovanovic, Tanja; Rothbaum, Barbara O; Nickerson, Lisa D; Ressler, Kerry J	February 1, 2022	Not Determined
32998684	Create Study	Embedding covariate adjustments in tree-based automated machine learning for biomedical big data analyses.	BMC bioinformatics	Manduchi, Elisabetta; Fu, Weixuan; Romano, Joseph D; Ruberto, Stefano; Moore, Jason H	October 1, 2020	Not Determined
32995783	Create Study	Common genetic variation in humans impacts in vitro susceptibility to SARS-CoV-2 infection.	bioRxiv : the preprint server for biology	Dobrindt, Kristina; Hoagland, Daisy A; Seah, Carina; Kassim, Bibi; O'Shea, Callan P; Iskhakova, Marina; Fernando, Michael B; Deans, P J Michael; Powell, Samuel K; Javidfar, Ben; Murphy, Aleta; Peter, Cyril; Møeller, Rasmus; Garcia, Meilin Fernandez; Kimura, Masaki; Iwasawa, Kentaro; Crary, John; Kotton, Darrell N; Takebe, Takanori; Huckins, Laura M; tenOever, Benjamin R; Akbarian, Schahram; Brennand, Kristen J	September 21, 2020	Not Determined
32981139	Create Study	Whole-Brain Image Analysis and Anatomical Atlas 3D Generation Using MagellanMapper.	Current protocols in neuroscience	Young, David M; Duhn, Clif; Gilson, Michael; Nojima, Mai; Yuruk, Deniz; Kumar, Aparna; Yu, Weimiao; Sanders, Stephan J	December 1, 2020	Not Determined
32978376	Create Study	Integrative genomics identifies a convergent molecular subtype that links epigenomic with transcriptomic differences in autism.	Nature communications	Ramaswami, Gokul; Won, Hyejung; Gandal, Michael J; Haney, Jillian; Wang, Jerry C; Wong, Chloe C Y; Sun, Wenjie; Prabhakar, Shyam; Mill, Jonathan; Geschwind, Daniel H	September 25, 2020	Not Determined
32929213	Create Study	Transcription factor POU3F2 regulates TRIM8 expression contributing to cellular functions implicated in schizophrenia.	Molecular psychiatry	Ding, Chaodong; Zhang, Chunling; Kopp, Richard; Kuney, Liz; Meng, Qingtuan; Wang, Le; Xia, Yan; Jiang, Yi; Dai, Rujia; Min, Shishi; Yao, Wei-Dong; Wong, Ma-Li; Ruan, Hongyu; Liu, Chunyu; Chen, Chao	July 1, 2021	Not Determined
32929078	Create Study	Chromatin accessibility mapping of the striatum identifies tyrosine kinase FYN as a therapeutic target for heroin use disorder.	Nature communications	Egervari, Gabor; Akpoyibo, Diana; Rahman, Tanni; Fullard, John F; Callens, James E; Landry, Joseph A; Ly, Annie; Zhou, Xianxiao; Warren, Noël; Hauberg, Mads E; Hoffman, Gabriel; Ellis, Randy; Ferland, Jacqueline-Marie N; Miller, Michael L; Keller, Eva; Zhang, Bin; Roussos, Panos; Hurd, Yasmin L	September 14, 2020	Not Determined
32917675	Create Study	Incomplete annotation has a disproportionate impact on our understanding of Mendelian and complex neurogenetic disorders.	Science advances	Zhang, David; Guelfi, Sebastian; Garcia-Ruiz, Sonia; Costa, Beatrice; Reynolds, Regina H; D'Sa, Karishma; Liu, Wenfei; Courtin, Thomas; Peterson, Amy; Jaffe, Andrew E; Hardy, John; Botía, Juan A; Collado-Torres, Leonardo; Ryten, Mina	June 1, 2020	Not Determined
32914678	Create Study	KEOPS complex expression in the frontal cortex in major depression and schizophrenia.	The world journal of biological psychiatry : the official journal of the World Federation of Societies of Biological Psychiatry	Abel, Mackenzie E; Zhang, Xiaolu; Asah, Sophie M; Wolfinger, Alyssa; McCullumsmith, Robert E; O'Donovan, Sinead M	July 1, 2021	Not Determined
32864809	Create Study	The Parkinson''s Disease Genome-Wide Association Study Locus Browser.	Movement disorders : official journal of the Movement Disorder Society	Grenn, Francis P; Kim, Jonggeol J; Makarious, Mary B; Iwaki, Hirotaka; Illarionova, Anastasia; Brolin, Kajsa; Kluss, Jillian H; Schumacher-Schuh, Artur F; Leonard, Hampton; Faghri, Faraz; Billingsley, Kimberley; Krohn, Lynne; Hall, Ashley; Diez-Fairen, Monica; Periñán, Maria Teresa; Foo, Jia Nee; Sandor, Cynthia; Webber, Caleb; Fiske, Brian K; Gibbs, J Raphael; Nalls, Mike A; Singleton, Andrew B; Bandres-Ciga, Sara; Reed, Xylena; Blauwendraat, Cornelis; International Parkinson's Disease Genomics Consortium (IPDGC)	November 1, 2020	Not Determined
32844198	Create Study	Genetic variants and functional pathways associated with resilience to Alzheimer''s disease.	Brain : a journal of neurology	Dumitrescu, Logan; Mahoney, Emily R; Mukherjee, Shubhabrata; Lee, Michael L; Bush, William S; Engelman, Corinne D; Lu, Qiongshi; Fardo, David W; Trittschuh, Emily H; Mez, Jesse; Kaczorowski, Catherine; Hernandez Saucedo, Hector; Widaman, Keith F; Buckley, Rachel; Properzi, Michael; Mormino, Elizabeth; Yang, Hyun-Sik; Harrison, Tessa; Hedden, Trey; Nho, Kwangsik; Andrews, Shea J; Tommet, Doug; Hadad, Niran; Sanders, R Elizabeth; Ruderfer, Douglas M; Gifford, Katherine A; Moore, Annah M; Cambronero, Francis; Zhong, Xiaoyuan; Raghavan, Neha S; Vardarajan, Badri; Alzheimer’s Disease Neuroimaging Initiative (ADNI); Alzheimer’s Disease Genetics Consortium (ADGC), A4 Study Team; Pericak-Vance, Margaret A; Farrer, Lindsay A; Wang, Li-San; Cruchaga, Carlos; Schellenberg, Gerard; Cox, Nancy J; Haines, Jonathan L; Keene, C Dirk; Saykin, Andrew J; Larson, Eric B; Sperling, Reisa A; Mayeux, Richard; Bennett, David A; Schneider, Julie A; Crane, Paul K; Jefferson, Angela L; Hohman, Timothy J	August 1, 2020	Not Determined
32826963	Create Study	Integrative analyses prioritize GNL3 as a risk gene for bipolar disorder.	Molecular psychiatry	Meng, Qingtuan; Wang, Le; Dai, Rujia; Wang, Jiawen; Ren, Zongyao; Liu, Sihan; Xia, Yan; Jiang, Yi; Duan, Fangyuan; Wang, Kangli; Liu, Chunyu; Chen, Chao	November 1, 2020	Not Determined
32820257	Create Study	The COVID-19 XPRIZE and the need for scalable, fast, and widespread testing.	Nature biotechnology	MacKay, Matthew J; Hooker, Anna C; Afshinnekoo, Ebrahim; Salit, Marc; Kelly, Jason; Feldstein, Jonathan V; Haft, Nick; Schenkel, Doug; Nambi, Subhalaxmi; Cai, Yizhi; Zhang, Feng; Church, George; Dai, Junbiao; Wang, Cliff L; Levy, Shawn; Huber, Jeff; Ji, Hanlee P; Kriegel, Alison; Wyllie, Anne L; Mason, Christopher E	September 1, 2020	Not Determined
32792264	Create Study	Transcriptomic Insight Into the Polygenic Mechanisms Underlying Psychiatric Disorders.	Biological psychiatry	Hernandez, Leanna M; Kim, Minsoo; Hoftman, Gil D; Haney, Jillian R; de la Torre-Ubieta, Luis; Pasaniuc, Bogdan; Gandal, Michael J	January 1, 2021	Not Determined
32791513	Create Study	Independent replications and integrative analyses confirm TRANK1 as a susceptibility gene for bipolar disorder.	Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology	Li, Wenqiang; Cai, Xin; Li, Hui-Juan; Song, Meng; Zhang, Chu-Yi; Yang, Yongfeng; Zhang, Luwen; Zhao, Lijuan; Liu, Weipeng; Wang, Lu; Shao, Minglong; Zhang, Yan; Zhang, Chen; Cai, Jun; Zhou, Dong-Sheng; Li, Xingxing; Hui, Li; Jia, Qiu-Fang; Qu, Na; Zhong, Bao-Liang; Zhang, Shu-Fang; Chen, Jing; Xia, Bin; Li, Yi; Song, Xueqin; Fan, Weixing; Tang, Wei; Tang, Wenxin; Tang, Jinsong; Chen, Xiaogang; Yue, Weihua; Zhang, Dai; Fang, Yiru; Xiao, Xiao; Li, Ming; Lv, Luxian; Chang, Hong	May 1, 2021	Not Determined
32755589	Create Study	RGS6 Mediates Effects of Voluntary Running on Adult Hippocampal Neurogenesis.	Cell reports	Gao, Yu; Shen, Minjie; Gonzalez, Jose Carlos; Dong, Qiping; Kannan, Sudharsan; Hoang, Johnson T; Eisinger, Brian E; Pandey, Jyotsna; Javadi, Sahar; Chang, Qiang; Wang, Daifeng; Overstreet-Wadiche, Linda; Zhao, Xinyu	August 4, 2020	Not Determined
32747830	Create Study	Immune complement and coagulation dysfunction in adverse outcomes of SARS-CoV-2 infection.	Nature medicine	Ramlall, Vijendra; Thangaraj, Phyllis M; Meydan, Cem; Foox, Jonathan; Butler, Daniel; Kim, Jacob; May, Ben; De Freitas, Jessica K; Glicksberg, Benjamin S; Mason, Christopher E; Tatonetti, Nicholas P; Shapira, Sagi D	October 1, 2020	Not Determined
32730587	Create Study	Dream: powerful differential expression analysis for repeated measures designs.	Bioinformatics (Oxford, England)	Hoffman, Gabriel E; Roussos, Panos	April 19, 2021	Not Determined
32727537	Create Study	RADAR: annotation and prioritization of variants in the post-transcriptional regulome of RNA-binding proteins.	Genome biology	Zhang, Jing; Liu, Jason; Lee, Donghoon; Feng, Jo-Jo; Lochovsky, Lucas; Lou, Shaoke; Rutenberg-Schoenberg, Michael; Gerstein, Mark	July 30, 2020	Not Determined
32723400	Create Study	Integrative omics analysis identifies differential biological pathways that are associated with regional grey matter volume changes in major depressive disorder.	Psychological medicine	Sha, Zhiqiang; Banihashemi, Layla	April 1, 2022	Not Determined
32714365	Create Study	Impute.me: An Open-Source, Non-profit Tool for Using Data From Direct-to-Consumer Genetic Testing to Calculate and Interpret Polygenic Risk Scores.	Frontiers in genetics	Folkersen, Lasse; Pain, Oliver; Ingason, Andrés; Werge, Thomas; Lewis, Cathryn M; Austin, Jehannine	January 1, 2020	Not Determined
32707082	Create Study	Neural Stem Cells Direct Axon Guidance via Their Radial Fiber Scaffold.	Neuron	Kaur, Navjot; Han, Wenqi; Li, Zhuo; Madrigal, M Pilar; Shim, Sungbo; Pochareddy, Sirisha; Gulden, Forrest O; Li, Mingfeng; Xu, Xuming; Xing, Xiaojun; Takeo, Yutaka; Li, Zhen; Lu, Kangrong; Imamura Kawasawa, Yuka; Ballester-Lurbe, Begoña; Moreno-Bravo, Juan Antonio; Chédotal, Alain; Terrado, José; Pérez-Roger, Ignacio; Koleske, Anthony J; Sestan, Nenad	September 23, 2020	Not Determined
32679108	Create Study	Tumor Microenvironment-Derived NRG1 Promotes Antiandrogen Resistance in Prostate Cancer.	Cancer cell	Zhang, Zeda; Karthaus, Wouter R; Lee, Young Sun; Gao, Vianne R; Wu, Chao; Russo, Joshua W; Liu, Menghan; Mota, Jose Mauricio; Abida, Wassim; Linton, Eliot; Lee, Eugine; Barnes, Spencer D; Chen, Hsuan-An; Mao, Ninghui; Wongvipat, John; Choi, Danielle; Chen, Xiaoping; Zhao, Huiyong; Manova-Todorova, Katia; de Stanchina, Elisa; Taplin, Mary-Ellen; Balk, Steven P; Rathkopf, Dana E; Gopalan, Anuradha; Carver, Brett S; Mu, Ping; Jiang, Xuejun; Watson, Philip A; Sawyers, Charles L	August 10, 2020	Not Determined
32668441	Create Study	Leveraging large genomic datasets to illuminate the pathobiology of autism spectrum disorders.	Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology	Searles Quick, Veronica B; Wang, Belinda; State, Matthew W	January 1, 2021	Not Determined
32659782	Create Study	PsychENCODE and beyond: transcriptomics and epigenomics of brain development and organoids.	Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology	Jourdon, Alexandre; Scuderi, Soraya; Capauto, Davide; Abyzov, Alexej; Vaccarino, Flora M	January 1, 2021	Not Determined
32641802	Create Study	lentiMPRA and MPRAflow for high-throughput functional characterization of gene regulatory elements.	Nature protocols	Gordon, M Grace; Inoue, Fumitaka; Martin, Beth; Schubach, Max; Agarwal, Vikram; Whalen, Sean; Feng, Shiyun; Zhao, Jingjing; Ashuach, Tal; Ziffra, Ryan; Kreimer, Anat; Georgakopoulos-Soares, Ilias; Yosef, Nir; Ye, Chun Jimmie; Pollard, Katherine S; Shendure, Jay; Kircher, Martin; Ahituv, Nadav	August 1, 2020	Not Determined
32640236	Create Study	Integrated Transcriptome and Network Analysis Reveals Spatiotemporal Dynamics of Calvarial Suturogenesis.	Cell reports	Holmes, Greg; Gonzalez-Reiche, Ana S; Lu, Na; Zhou, Xianxiao; Rivera, Joshua; Kriti, Divya; Sebra, Robert; Williams, Anthony A; Donovan, Michael J; Potter, S Steven; Pinto, Dalila; Zhang, Bin; van Bakel, Harm; Jabs, Ethylin Wang	July 7, 2020	Not Determined
32634676	Create Study	Functional genomics links genetic origins to pathophysiology in neurodegenerative and neuropsychiatric disease.	Current opinion in genetics & development	Wamsley, Brie; Geschwind, Daniel H	December 1, 2020	Not Determined
32632206	Create Study	Older molecular brain age in severe mental illness.	Molecular psychiatry	Lin, Chien-Wei; Chang, Lun-Ching; Ma, Tianzhou; Oh, Hyunjung; French, Beverly; Puralewski, Rachel; Mathews, Fasil; Fang, Yusi; Lewis, David A; Kennedy, James L; Mueller, Daniel; Marshe, Victoria S; Jaffe, Andrew; Chen, Qiang; Ursini, Gianluca; Weinberger, Daniel; Newman, Anne B; Lenze, Eric J; Nikolova, Yuliya S; Tseng, George C; Sibille, Etienne	July 1, 2021	Not Determined
32619508	Create Study	One for All: A Pooled Approach to Classify Functional Impacts of Multiple Mutations.	Cell stem cell	Jourdon, Alexandre; Vaccarino, Flora M	July 2, 2020	Not Determined
32610082	Create Study	A Chromatin Accessibility Atlas of the Developing Human Telencephalon.	Cell	Markenscoff-Papadimitriou, Eirene; Whalen, Sean; Przytycki, Pawel; Thomas, Reuben; Binyameen, Fadya; Nowakowski, Tomasz J; Kriegstein, Arnold R; Sanders, Stephan J; State, Matthew W; Pollard, Katherine S; Rubenstein, John L	August 6, 2020	Not Determined
32609087	Create Study	Homeostatic plasticity fails at the intersection of autism-gene mutations and a novel class of common genetic modifiers.	eLife	Genç, Özgür; An, Joon-Yong; Fetter, Richard D; Kulik, Yelena; Zunino, Giulia; Sanders, Stephan J; Davis, Graeme W	July 1, 2020	Not Determined
32602773	Create Study	Characterizing the dynamic and functional DNA methylation landscape in the developing human cortex.	Epigenetics	Perzel Mandell, Kira A; Price, Amanda J; Wilton, Richard; Collado-Torres, Leonardo; Tao, Ran; Eagles, Nicholas J; Szalay, Alexander S; Hyde, Thomas M; Weinberger, Daniel R; Kleinman, Joel E; Jaffe, Andrew E	January 1, 2021	Not Determined
32578147	Create Study	Investigation of Schizophrenia with Human Induced Pluripotent Stem Cells.	Advances in neurobiology	Powell, Samuel K; O'Shea, Callan P; Shannon, Sara Rose; Akbarian, Schahram; Brennand, Kristen J	January 1, 2020	Not Determined
32561500	Create Study	Identification of Radioresponsive Genes in Esophageal Cancer from Longitudinal and Single Cell Exome Sequencing.	International journal of radiation oncology, biology, physics	Yang, Ling; Zhang, Xiaoyan; MacKay, Matthew; Foox, Jonathan; Hou, Qiang; Zheng, Xiaoli; Zhou, Rongjing; Huang, Ming; Jing, Zhao; Mason, Christopher E; Wu, Shixiu	November 15, 2020	Not Determined
32553197	Create Study	The Bidirectional Relationship of Depression and Inflammation: Double Trouble.	Neuron	Beurel, Eléonore; Toups, Marisa; Nemeroff, Charles B	July 22, 2020	Not Determined
32533064	Create Study	Functional annotation of rare structural variation in the human brain.	Nature communications	Han, Lide; Zhao, Xuefang; Benton, Mary Lauren; Perumal, Thaneer; Collins, Ryan L; Hoffman, Gabriel E; Johnson, Jessica S; Sloofman, Laura; Wang, Harold Z; Stone, Matthew R; CommonMind Consortium; Brennand, Kristen J; Brand, Harrison; Sieberts, Solveig K; Marenco, Stefano; Peters, Mette A; Lipska, Barbara K; Roussos, Panos; Capra, John A; Talkowski, Michael; Ruderfer, Douglas M	June 12, 2020	Not Determined
32511494	Create Study	Identification of Immune complement function as a determinant of adverse SARS-CoV-2 infection outcome.	medRxiv : the preprint server for health sciences	Ramlall, Vijendra; Thangaraj, Phyllis M; Meydan, Cem; Foox, Jonathan; Butler, Daniel; May, Ben; De Freitas, Jessica K; Glicksberg, Benjamin S; Mason, Christopher E; Tatonetti, Nicholas P; Shapira, Sagi D	June 6, 2020	Not Determined
32511352	Create Study	Shotgun Transcriptome and Isothermal Profiling of SARS-CoV-2 Infection Reveals Unique Host Responses, Viral Diversification, and Drug Interactions.	bioRxiv : the preprint server for biology	Butler, Daniel J; Mozsary, Christopher; Meydan, Cem; Danko, David; Foox, Jonathan; Rosiene, Joel; Shaiber, Alon; Afshinnekoo, Ebrahim; MacKay, Matthew; Sedlazeck, Fritz J; Ivanov, Nikolay A; Sierra, Maria; Pohle, Diana; Zietz, Michael; Gisladottir, Undina; Ramlall, Vijendra; Westover, Craig D; Ryon, Krista; Young, Benjamin; Bhattacharya, Chandrima; Ruggiero, Phyllis; Langhorst, Bradley W; Tanner, Nathan; Gawrys, Justyna; Meleshko, Dmitry; Xu, Dong; Steel, Peter A D; Shemesh, Amos J; Xiang, Jenny; Thierry-Mieg, Jean; Thierry-Mieg, Danielle; Schwartz, Robert E; Iftner, Angelika; Bezdan, Daniela; Sipley, John; Cong, Lin; Craney, Arryn; Velu, Priya; Melnick, Ari M; Hajirasouliha, Iman; Horner, Stacy M; Iftner, Thomas; Salvatore, Mirella; Loda, Massimo; Westblade, Lars F; Cushing, Melissa; Levy, Shawn; Wu, Shixiu; Tatonetti, Nicholas; Imielinski, Marcin; Rennert, Hanna; Mason, Christopher E	May 1, 2020	Not Determined
32492425	Create Study	Analysis of Genetically Regulated Gene Expression Identifies a Prefrontal PTSD Gene, SNRNP35, Specific to Military Cohorts.	Cell reports	Huckins, Laura M; Chatzinakos, Chris; Breen, Michael S; Hartmann, Jakob; Klengel, Torsten; da Silva Almeida, Ana C; Dobbyn, Amanda; Girdhar, Kiran; Hoffman, Gabriel E; Klengel, Claudia; Logue, Mark W; Lori, Adriana; Maihofer, Adam X; Morrison, Filomene G; Nguyen, Hoang T; Park, Yongjin; Ruderfer, Douglas; Sloofman, Laura G; van Rooij, Sanne J H; PTSD Working Group of Psychiatric Genomics Consortium; Baker, Dewleen G; Chen, Chia-Yen; Cox, Nancy; Duncan, Laramie E; Geyer, Mark A; Glatt, Stephen J; Im, Hae Kyung; Risbrough, Victoria B; Smoller, Jordan W; Stein, Dan J; Yehuda, Rachel; Liberzon, Israel; Koenen, Karestan C; Jovanovic, Tanja; Kellis, Manolis; Miller, Mark W; Bacanu, Silviu-Alin; Nievergelt, Caroline M; Buxbaum, Joseph D; Sklar, Pamela; Ressler, Kerry J; Stahl, Eli A; Daskalakis, Nikolaos P	June 2, 2020	Not Determined
32424284	Create Study	Shared proteomic effects of cerebral atherosclerosis and Alzheimer''s disease on the human brain.	Nature neuroscience	Wingo, Aliza P; Fan, Wen; Duong, Duc M; Gerasimov, Ekaterina S; Dammer, Eric B; Liu, Yue; Harerimana, Nadia V; White, Bartholomew; Thambisetty, Madhav; Troncoso, Juan C; Kim, Namhee; Schneider, Julie A; Hajjar, Ihab M; Lah, James J; Bennett, David A; Seyfried, Nicholas T; Levey, Allan I; Wingo, Thomas S	June 1, 2020	Not Determined
32404946	Create Study	Cortical cellular diversity and development in schizophrenia.	Molecular psychiatry	Price, Amanda J; Jaffe, Andrew E; Weinberger, Daniel R	January 1, 2021	Not Determined
32375154	Create Study	The NASA Twins Study: The Effect of One Year in Space on Long-Chain Fatty Acid Desaturases and Elongases.	Lifestyle genomics	Schmidt, Michael A; Meydan, Cem; Schmidt, Caleb M; Afshinnekoo, Ebrahim; Mason, Christopher E	January 1, 2020	Not Determined
32375049	Create Study	Variation of Human Neural Stem Cells Generating Organizer States In Vitro before Committing to Cortical Excitatory or Inhibitory Neuronal Fates.	Cell reports	Micali, Nicola; Kim, Suel-Kee; Diaz-Bustamante, Marcelo; Stein-O'Brien, Genevieve; Seo, Seungmae; Shin, Joo-Heon; Rash, Brian G; Ma, Shaojie; Wang, Yanhong; Olivares, Nicolas A; Arellano, Jon I; Maynard, Kristen R; Fertig, Elana J; Cross, Alan J; Bürli, Roland W; Brandon, Nicholas J; Weinberger, Daniel R; Chenoweth, Joshua G; Hoeppner, Daniel J; Sestan, Nenad; Rakic, Pasko; Colantuoni, Carlo; McKay, Ronald D	May 5, 2020	Not Determined
32317787	Create Study	A framework for an evidence-based gene list relevant to autism spectrum disorder.	Nature reviews. Genetics	Schaaf, Christian P; Betancur, Catalina; Yuen, Ryan K C; Parr, Jeremy R; Skuse, David H; Gallagher, Louise; Bernier, Raphael A; Buchanan, Janet A; Buxbaum, Joseph D; Chen, Chun-An; Dies, Kira A; Elsabbagh, Mayada; Firth, Helen V; Frazier, Thomas; Hoang, Ny; Howe, Jennifer; Marshall, Christian R; Michaud, Jacques L; Rennie, Olivia; Szatmari, Peter; Chung, Wendy K; Bolton, Patrick F; Cook, Edwin H; Scherer, Stephen W; Vorstman, Jacob A S	June 1, 2020	Not Determined
32313079	Create Study	Limits in the detection of m6A changes using MeRIP/m6A-seq.	Scientific reports	McIntyre, Alexa B R; Gokhale, Nandan S; Cerchietti, Leandro; Jaffrey, Samie R; Horner, Stacy M; Mason, Christopher E	April 20, 2020	Not Determined
32299488	Create Study	Human in vitro models for understanding mechanisms of autism spectrum disorder.	Molecular autism	Gordon, Aaron; Geschwind, Daniel H	April 16, 2020	Not Determined
32282793	Create Study	DRAMS: A tool to detect and re-align mixed-up samples for integrative studies of multi-omics data.	PLoS computational biology	Jiang, Yi; Giase, Gina; Grennan, Kay; Shieh, Annie W; Xia, Yan; Han, Lide; Wang, Quan; Wei, Qiang; Chen, Rui; Liu, Sihan; White, Kevin P; Chen, Chao; Li, Bingshan; Liu, Chunyu	April 1, 2020	Not Determined
32268104	Create Study	Whole-Genome and RNA Sequencing Reveal Variation and Transcriptomic Coordination in the Developing Human Prefrontal Cortex.	Cell reports	Werling, Donna M; Pochareddy, Sirisha; Choi, Jinmyung; An, Joon-Yong; Sheppard, Brooke; Peng, Minshi; Li, Zhen; Dastmalchi, Claudia; Santpere, Gabriel; Sousa, André M M; Tebbenkamp, Andrew T N; Kaur, Navjot; Gulden, Forrest O; Breen, Michael S; Liang, Lindsay; Gilson, Michael C; Zhao, Xuefang; Dong, Shan; Klei, Lambertus; Cicek, A Ercument; Buxbaum, Joseph D; Adle-Biassette, Homa; Thomas, Jean-Leon; Aldinger, Kimberly A; O'Day, Diana R; Glass, Ian A; Zaitlen, Noah A; Talkowski, Michael E; Roeder, Kathryn; State, Matthew W; Devlin, Bernie; Sanders, Stephan J; Sestan, Nenad	April 7, 2020	Not Determined
32240163	Create Study	Multiview learning for understanding functional multiomics.	PLoS computational biology	Nguyen, Nam D; Wang, Daifeng	April 1, 2020	Not Determined
32220301	Create Study	Loss of CHD1 Promotes Heterogeneous Mechanisms of Resistance to AR-Targeted Therapy via Chromatin Dysregulation.	Cancer cell	Zhang, Zeda; Zhou, Chuanli; Li, Xiaoling; Barnes, Spencer D; Deng, Su; Hoover, Elizabeth; Chen, Chi-Chao; Lee, Young Sun; Zhang, Yanxiao; Wang, Choushi; Metang, Lauren A; Wu, Chao; Tirado, Carla Rodriguez; Johnson, Nickolas A; Wongvipat, John; Navrazhina, Kristina; Cao, Zhen; Choi, Danielle; Huang, Chun-Hao; Linton, Eliot; Chen, Xiaoping; Liang, Yupu; Mason, Christopher E; de Stanchina, Elisa; Abida, Wassim; Lujambio, Amaia; Li, Sheng; Lowe, Scott W; Mendell, Joshua T; Malladi, Venkat S; Sawyers, Charles L; Mu, Ping	April 13, 2020	Not Determined
32184385	Create Study	Further confirmation of netrin 1 receptor (DCC) as a depression risk gene via integrations of multi-omics data.	Translational psychiatry	Li, Hui-Juan; Qu, Na; Hui, Li; Cai, Xin; Zhang, Chu-Yi; Zhong, Bao-Liang; Zhang, Shu-Fang; Chen, Jing; Xia, Bin; Wang, Lu; Jia, Qiu-Fang; Li, Wei; Chang, Hong; Xiao, Xiao; Li, Ming; Li, Yi	March 17, 2020	Not Determined
32167531	Create Study	Robust partial reference-free cell composition estimation from tissue expression.	Bioinformatics (Oxford, England)	Li, Ziyi; Guo, Zhenxing; Cheng, Ying; Jin, Peng; Wu, Hao	June 1, 2020	Not Determined
32143829	Create Study	Gene Expression in Patient-Derived Neural Progenitors Implicates WNT5A Signaling in the Etiology of Schizophrenia.	Biological psychiatry	Evgrafov, Oleg V; Armoskus, Chris; Wrobel, Bozena B; Spitsyna, Valeria N; Souaiaia, Tade; Herstein, Jennifer S; Walker, Christopher P; Nguyen, Joseph D; Camarena, Adrian; Weitz, Jonathan R; Kim, Jae Mun Hugo; Lopez Duarte, Edder; Wang, Kai; Simpson, George M; Sobell, Janet L; Medeiros, Helena; Pato, Michele T; Pato, Carlos N; Knowles, James A	August 1, 2020	Not Determined
32114783	Create Study	Translating Across Circuits and Genetics Toward Progress in Fear- and Anxiety-Related Disorders.	The American journal of psychiatry	Ressler, Kerry J	March 1, 2020	Not Determined
32081027	Create Study	Dynamic N6-methyladenosine RNA methylation in brain and diseases.	Epigenomics	Shafik, Andrew M; Allen, Emily G; Jin, Peng	February 1, 2020	Not Determined
32079618	Create Study	Recounting the FANTOM CAGE-Associated Transcriptome.	Genome research	Imada, Eddie Luidy; Sanchez, Diego Fernando; Collado-Torres, Leonardo; Wilks, Christopher; Matam, Tejasvi; Dinalankara, Wikum; Stupnikov, Aleksey; Lobo-Pereira, Francisco; Yip, Chi-Wai; Yasuzawa, Kayoko; Kondo, Naoto; Itoh, Masayoshi; Suzuki, Harukazu; Kasukawa, Takeya; Hon, Chung-Chau; de Hoon, Michiel J L; Shin, Jay W; Carninci, Piero; Jaffe, Andrew E; Leek, Jeffrey T; Favorov, Alexander; Franco, Gloria R; Langmead, Ben; Marchionni, Luigi	July 1, 2020	Not Determined
32075678	Create Study	A chromosomal connectome for psychiatric and metabolic risk variants in adult dopaminergic neurons.	Genome medicine	Espeso-Gil, Sergio; Halene, Tobias; Bendl, Jaroslav; Kassim, Bibi; Ben Hutta, Gabriella; Iskhakova, Marina; Shokrian, Neda; Auluck, Pavan; Javidfar, Behnam; Rajarajan, Prashanth; Chandrasekaran, Sandhya; Peter, Cyril J; Cote, Alanna; Birnbaum, Rebecca; Liao, Will; Borrman, Tyler; Wiseman, Jennifer; Bell, Aaron; Bannon, Michael J; Roussos, Panagiotis; Crary, John F; Weng, Zhiping; Marenco, Stefano; Lipska, Barbara; Tsankova, Nadejda M; Huckins, Laura; Jiang, Yan; Akbarian, Schahram	February 19, 2020	Not Determined
32033924	Create Study	Nervous and Endocrine System Dysfunction in Posttraumatic Stress Disorder: An Overview and Consideration of Sex as a Biological Variable.	Biological psychiatry. Cognitive neuroscience and neuroimaging	Seligowski, Antonia V; Harnett, Nathaniel G; Merker, Julia B; Ressler, Kerry J	April 1, 2020	Not Determined
32003784	Create Study	decorate: differential epigenetic correlation test.	Bioinformatics (Oxford, England)	Hoffman, Gabriel E; Bendl, Jaroslav; Girdhar, Kiran; Roussos, Panos	May 1, 2020	Not Determined
31981491	Create Study	Large-Scale Exome Sequencing Study Implicates Both Developmental and Functional Changes in the Neurobiology of Autism.	Cell	Satterstrom, F Kyle; Kosmicki, Jack A; Wang, Jiebiao; Breen, Michael S; De Rubeis, Silvia; An, Joon-Yong; Peng, Minshi; Collins, Ryan; Grove, Jakob; Klei, Lambertus; Stevens, Christine; Reichert, Jennifer; Mulhern, Maureen S; Artomov, Mykyta; Gerges, Sherif; Sheppard, Brooke; Xu, Xinyi; Bhaduri, Aparna; Norman, Utku; Brand, Harrison; Schwartz, Grace; Nguyen, Rachel; Guerrero, Elizabeth E; Dias, Caroline; Autism Sequencing Consortium; iPSYCH-Broad Consortium; Betancur, Catalina; Cook, Edwin H; Gallagher, Louise; Gill, Michael; Sutcliffe, James S; Thurm, Audrey; Zwick, Michael E; Børglum, Anders D; State, Matthew W; Cicek, A Ercument; Talkowski, Michael E; Cutler, David J; Devlin, Bernie; Sanders, Stephan J; Roeder, Kathryn; Daly, Mark J; Buxbaum, Joseph D	February 6, 2020	Not Determined
31949163	Create Study	Autism spectrum disorder.	Nature reviews. Disease primers	Lord, Catherine; Brugha, Traolach S; Charman, Tony; Cusack, James; Dumas, Guillaume; Frazier, Thomas; Jones, Emily J H; Jones, Rebecca M; Pickles, Andrew; State, Matthew W; Taylor, Julie Lounds; Veenstra-VanderWeele, Jeremy	January 16, 2020	Not Determined
31907405	Create Study	The therapeutic landscape for cells engineered with chimeric antigen receptors.	Nature biotechnology	MacKay, Matthew; Afshinnekoo, Ebrahim; Rub, Jonathan; Hassan, Ciaran; Khunte, Mihir; Baskaran, Nithyashri; Owens, Bryan; Liu, Lauren; Roboz, Gail J; Guzman, Monica L; Melnick, Ari M; Wu, Shixiu; Mason, Christopher E	February 1, 2020	Not Determined
31886035	Create Study	Translating current biomedical therapies for long duration, deep space missions.	Precision clinical medicine	Iosim, Sonia; MacKay, Matthew; Westover, Craig; Mason, Christopher E	December 1, 2019	Not Determined
31857689	Create Study	Altered white matter microstructural organization in posttraumatic stress disorder across 3047 adults: results from the PGC-ENIGMA PTSD consortium.	Molecular psychiatry	Dennis, Emily L; Disner, Seth G; Fani, Negar; Salminen, Lauren E; Logue, Mark; Clarke, Emily K; Haswell, Courtney C; Averill, Christopher L; Baugh, Lee A; Bomyea, Jessica; Bruce, Steven E; Cha, Jiook; Choi, Kyle; Davenport, Nicholas D; Densmore, Maria; du Plessis, Stefan; Forster, Gina L; Frijling, Jessie L; Gonenc, Atilla; Gruber, Staci; Grupe, Daniel W; Guenette, Jeffrey P; Hayes, Jasmeet; Hofmann, David; Ipser, Jonathan; Jovanovic, Tanja; Kelly, Sinead; Kennis, Mitzy; Kinzel, Philipp; Koch, Saskia B J; Koerte, Inga; Koopowitz, Sheri; Korgaonkar, Mayuresh; Krystal, John; Lebois, Lauren A M; Li, Gen; Magnotta, Vincent A; Manthey, Antje; May, Geoff J; Menefee, Deleene S; Nawijn, Laura; Nelson, Steven M; Neufeld, Richard W J; Nitschke, Jack B; O'Doherty, Daniel; Peverill, Matthew; Ressler, Kerry J; Roos, Annerine; Sheridan, Margaret A; Sierk, Anika; Simmons, Alan; Simons, Raluca M; Simons, Jeffrey S; Stevens, Jennifer; Suarez-Jimenez, Benjamin; Sullivan, Danielle R; Théberge, Jean; Tran, Jana K; van den Heuvel, Leigh; van der Werff, Steven J A; van Rooij, Sanne J H; van Zuiden, Mirjam; Velez, Carmen; Verfaellie, Mieke; Vermeiren, Robert R J M; Wade, Benjamin S C; Wager, Tor; Walter, Henrik; Winternitz, Sherry; Wolff, Jonathan; York, Gerald; Zhu, Ye; Zhu, Xi; Abdallah, Chadi G; Bryant, Richard; Daniels, Judith K; Davidson, Richard J; Fercho, Kelene A; Franz, Carol; Geuze, Elbert; Gordon, Evan M; Kaufman, Milissa L; Kremen, William S; Lagopoulos, Jim; Lanius, Ruth A; Lyons, Michael J; McCauley, Stephen R; McGlinchey, Regina; McLaughlin, Katie A; Milberg, William; Neria, Yuval; Olff, Miranda; Seedat, Soraya; Shenton, Martha; Sponheim, Scott R; Stein, Dan J; Stein, Murray B; Straube, Thomas; Tate, David F; van der Wee, Nic J A; Veltman, Dick J; Wang, Li; Wilde, Elisabeth A; Thompson, Paul M; Kochunov, Peter; Jahanshad, Neda; Morey, Rajendra A	August 1, 2021	Not Determined
31852722	Create Study	Characterizing the nuclear and cytoplasmic transcriptomes in developing and mature human cortex uncovers new insight into psychiatric disease gene regulation.	Genome research	Price, Amanda J; Hwang, Taeyoung; Tao, Ran; Burke, Emily E; Rajpurohit, Anandita; Shin, Joo Heon; Hyde, Thomas M; Kleinman, Joel E; Jaffe, Andrew E; Weinberger, Daniel R	January 1, 2020	Not Determined
31819045	Create Study	The depression GWAS risk allele predicts smaller cerebellar gray matter volume and reduced SIRT1 mRNA expression in Chinese population.	Translational psychiatry	Liu, Weipeng; Yan, Hao; Zhou, Danyang; Cai, Xin; Zhang, Yuyanan; Li, Shiyi; Li, Huijuan; Li, Shiwu; Zhou, Dong-Sheng; Li, Xingxing; Zhang, Chen; Sun, Yan; Dai, Jia-Pei; Zhong, Jingmei; Yao, Yong-Gang; Luo, Xiong-Jian; Fang, Yiru; Zhang, Dai; Ma, Yina; Yue, Weihua; Li, Ming; Xiao, Xiao	December 9, 2019	Not Determined
31810760	Create Study	Altered m6A Modification of Specific Cellular Transcripts Affects Flaviviridae Infection.	Molecular cell	Gokhale, Nandan S; McIntyre, Alexa B R; Mattocks, Melissa D; Holley, Christopher L; Lazear, Helen M; Mason, Christopher E; Horner, Stacy M	February 6, 2020	Not Determined
31788036	Create Study	Alu insertion polymorphisms shared by Papio baboons and Theropithecus gelada reveal an intertwined common ancestry.	Mobile DNA	Walker, Jerilyn A; Jordan, Vallmer E; Storer, Jessica M; Steely, Cody J; Gonzalez-Quiroga, Paulina; Beckstrom, Thomas O; Rewerts, Lydia C; St Romain, Corey P; Rockwell, Catherine E; Rogers, Jeffrey; Jolly, Clifford J; Konkel, Miriam K; Baboon Genome Analysis Consortium; Batzer, Mark A	January 1, 2019	Not Determined
31778651	Create Study	Modeling the Evolution of Human Brain Development Using Organoids.	Cell	Muchnik, Sydney Keaton; Lorente-Galdos, Belen; Santpere, Gabriel; Sestan, Nenad	November 27, 2019	Not Determined
31631012	Create Study	Identification and Massively Parallel Characterization of Regulatory Elements Driving Neural Induction.	Cell stem cell	Inoue, Fumitaka; Kreimer, Anat; Ashuach, Tal; Ahituv, Nadav; Yosef, Nir	November 7, 2019	Not Determined
31626773	Create Study	Genetic Control of Expression and Splicing in Developing Human Brain Informs Disease Mechanisms.	Cell	Walker, Rebecca L; Ramaswami, Gokul; Hartl, Christopher; Mancuso, Nicholas; Gandal, Michael J; de la Torre-Ubieta, Luis; Pasaniuc, Bogdan; Stein, Jason L; Geschwind, Daniel H	October 17, 2019	Not Determined
31608310	Create Study	Psychiatric Genetics, Epigenetics, and Cellular Models in Coming Years.	Journal of psychiatry and brain science	Liu, Chunyu; Faraone, Stephen V; Glatt, Stephen J	January 1, 2019	Not Determined
31599933	Create Study	Evaluating Chromatin Accessibility Differences Across Multiple Primate Species Using a Joint Modeling Approach.	Genome biology and evolution	Edsall, Lee E; Berrio, Alejandro; Majoros, William H; Swain-Lenz, Devjanee; Morrow, Shauna; Shibata, Yoichiro; Safi, Alexias; Wray, Gregory A; Crawford, Gregory E; Allen, Andrew S	October 1, 2019	Not Determined
31563948	Create Study	Melanin Concentrating Hormone Signaling Deficits in Schizophrenia: Association With Memory and Social Impairments and Abnormal Sensorimotor Gating.	The international journal of neuropsychopharmacology	Vawter, Marquis P; Schulmann, Anton; Alhassen, Lamees; Alhassen, Wedad; Hamzeh, Abdul Rezzak; Sakr, Jasmine; Pauluk, Lucas; Yoshimura, Ryan; Wang, Xuejie; Dai, Qi; Sanathara, Nayna; Civelli, Olivier; Alachkar, Amal	March 10, 2020	Not Determined
31554518	Create Study	Divergent neuronal DNA methylation patterns across human cortical development reveal critical periods and a unique role of CpH methylation.	Genome biology	Price, Amanda J; Collado-Torres, Leonardo; Ivanov, Nikolay A; Xia, Wei; Burke, Emily E; Shin, Joo Heon; Tao, Ran; Ma, Liang; Jia, Yankai; Hyde, Thomas M; Kleinman, Joel E; Weinberger, Daniel R; Jaffe, Andrew E	September 26, 2019	Not Determined
31551426	Create Study	CommonMind Consortium provides transcriptomic and epigenomic data for Schizophrenia and Bipolar Disorder.	Scientific data	Hoffman, Gabriel E; Bendl, Jaroslav; Voloudakis, Georgios; Montgomery, Kelsey S; Sloofman, Laura; Wang, Ying-Chih; Shah, Hardik R; Hauberg, Mads E; Johnson, Jessica S; Girdhar, Kiran; Song, Lingyun; Fullard, John F; Kramer, Robin; Hahn, Chang-Gyu; Gur, Raquel; Marenco, Stefano; Lipska, Barbara K; Lewis, David A; Haroutunian, Vahram; Hemby, Scott; Sullivan, Patrick; Akbarian, Schahram; Chess, Andrew; Buxbaum, Joseph D; Crawford, Greg E; Domenici, Enrico; Devlin, Bernie; Sieberts, Solveig K; Peters, Mette A; Roussos, Panos	September 24, 2019	Not Determined
31544924	Create Study	Functional interpretation of genetic variants using deep learning predicts impact on chromatin accessibility and histone modification.	Nucleic acids research	Hoffman, Gabriel E; Bendl, Jaroslav; Girdhar, Kiran; Schadt, Eric E; Roussos, Panos	November 18, 2019	Not Determined
31537091	Create Study	The Devastating Clinical Consequences of Child Abuse and Neglect: Increased Disease Vulnerability and Poor Treatment Response in Mood Disorders.	The American journal of psychiatry	Lippard, Elizabeth T C; Nemeroff, Charles B	January 1, 2020	Not Determined
31534116	Create Study	Inflammation-related biomarkers in major psychiatric disorders: a cross-disorder assessment of reproducibility and specificity in 43 meta-analyses.	Translational psychiatry	Yuan, Ning; Chen, Yu; Xia, Yan; Dai, Jiacheng; Liu, Chunyu	September 18, 2019	Not Determined
31519912	Create Study	Pre- and peri-implantation Zika virus infection impairs fetal development by targeting trophectoderm cells.	Nature communications	Tan, Lei; Lacko, Lauretta A; Zhou, Ting; Tomoiaga, Delia; Hurtado, Romulo; Zhang, Tuo; Sevilla, Ana; Zhong, Aaron; Mason, Christopher E; Noggle, Scott; Evans, Todd; Stuhlmann, Heidi; Schwartz, Robert E; Chen, Shuibing	September 13, 2019	Not Determined
31501426	Create Study	Accurate detection of m6A RNA modifications in native RNA sequences.	Nature communications	Liu, Huanle; Begik, Oguzhan; Lucas, Morghan C; Ramirez, Jose Miguel; Mason, Christopher E; Wiener, David; Schwartz, Schraga; Mattick, John S; Smith, Martin A; Novoa, Eva Maria	September 9, 2019	Not Determined
31484546	Create Study	TOAST: improving reference-free cell composition estimation by cross-cell type differential analysis.	Genome biology	Li, Ziyi; Wu, Hao	September 4, 2019	Not Determined
31455887	Create Study	Global landscape and genetic regulation of RNA editing in cortical samples from individuals with schizophrenia.	Nature neuroscience	Breen, Michael S; Dobbyn, Amanda; Li, Qin; Roussos, Panos; Hoffman, Gabriel E; Stahl, Eli; Chess, Andrew; Sklar, Pamela; Li, Jin Billy; Devlin, Bernie; Buxbaum, Joseph D; CommonMind Consortium	September 1, 2019	Not Determined
31455884	Create Study	Profiling allele-specific gene expression in brains from individuals with autism spectrum disorder reveals preferential minor allele usage.	Nature neuroscience	Lee, Changhoon; Kang, Eun Yong; Gandal, Michael J; Eskin, Eleazar; Geschwind, Daniel H	September 1, 2019	Not Determined
31444360	Create Study	Integrative transcriptome imputation reveals tissue-specific and shared biological mechanisms mediating susceptibility to complex traits.	Nature communications	Zhang, Wen; Voloudakis, Georgios; Rajagopal, Veera M; Readhead, Ben; Dudley, Joel T; Schadt, Eric E; Björkegren, Johan L M; Kim, Yungil; Fullard, John F; Hoffman, Gabriel E; Roussos, Panos	August 23, 2019	Not Determined
31424545	Create Study	Comparative Genomic Characterization of the Multimammate Mouse Mastomys coucha.	Molecular biology and evolution	Hardin, Aaron; Nevonen, Kimberly A; Eckalbar, Walter L; Carbone, Lucia; Ahituv, Nadav	December 1, 2019	Not Determined
31399567	Create Study	Diurnal rhythms in gene expression in the prefrontal cortex in schizophrenia.	Nature communications	Seney, Marianne L; Cahill, Kelly; Enwright 3rd, John F; Logan, Ryan W; Huo, Zhiguang; Zong, Wei; Tseng, George; McClung, Colleen A	August 9, 2019	Not Determined
31395865	Create Study	Saturation mutagenesis of twenty disease-associated regulatory elements at single base-pair resolution.	Nature communications	Kircher, Martin; Xiong, Chenling; Martin, Beth; Schubach, Max; Inoue, Fumitaka; Bell, Robert J A; Costello, Joseph F; Shendure, Jay; Ahituv, Nadav	August 8, 2019	Not Determined
31348493	Create Study	Diverse and dynamic DNA modifications in brain and diseases.	Human molecular genetics	Armstrong, Matthew J; Jin, Yulin; Allen, Emily G; Jin, Peng	November 21, 2019	Not Determined
31303374	Create Study	A Single-Cell Transcriptomic Atlas of Human Neocortical Development during Mid-gestation.	Neuron	Polioudakis, Damon; de la Torre-Ubieta, Luis; Langerman, Justin; Elkins, Andrew G; Shi, Xu; Stein, Jason L; Vuong, Celine K; Nichterwitz, Susanne; Gevorgian, Melinda; Opland, Carli K; Lu, Daning; Connell, William; Ruzzo, Elizabeth K; Lowe, Jennifer K; Hadzic, Tarik; Hinz, Flora I; Sabri, Shan; Lowry, William E; Gerstein, Mark B; Plath, Kathrin; Geschwind, Daniel H	September 4, 2019	Not Determined
31283446	Create Study	Regulation of Viral Infection by the RNA Modification N6-Methyladenosine.	Annual review of virology	Williams, Graham D; Gokhale, Nandan S; Horner, Stacy M	September 29, 2019	Not Determined
31279629	Create Study	Building a Hybrid Physical-Statistical Classifier for Predicting the Effect of Variants Related to Protein-Drug Interactions.	Structure (London, England : 1993)	Wang, Bo; Yan, Chengfei; Lou, Shaoke; Emani, Prashant; Li, Bian; Xu, Min; Kong, Xiangmeng; Meyerson, William; Yang, Yucheng T; Lee, Donghoon; Gerstein, Mark	September 3, 2019	Not Determined
31230762	Create Study	The Autism-Associated Gene Scn2a Contributes to Dendritic Excitability and Synaptic Function in the Prefrontal Cortex.	Neuron	Spratt, Perry W E; Ben-Shalom, Roy; Keeshen, Caroline M; Burke Jr, Kenneth J; Clarkson, Rebecca L; Sanders, Stephan J; Bender, Kevin J	August 21, 2019	Not Determined
31174959	Create Study	Regional Heterogeneity in Gene Expression, Regulation, and Coherence in the Frontal Cortex and Hippocampus across Development and Schizophrenia.	Neuron	Collado-Torres, Leonardo; Burke, Emily E; Peterson, Amy; Shin, JooHeon; Straub, Richard E; Rajpurohit, Anandita; Semick, Stephen A; Ulrich, William S; BrainSeq Consortium; Price, Amanda J; Valencia, Cristian; Tao, Ran; Deep-Soboslay, Amy; Hyde, Thomas M; Kleinman, Joel E; Weinberger, Daniel R; Jaffe, Andrew E	July 17, 2019	Not Determined
31173711	Create Study	Breakthrough Moments: Yoshiki Sasai''s Discoveries in the Third Dimension.	Cell stem cell	Mariani, Jessica; Vaccarino, Flora M	June 6, 2019	Not Determined
31160561	Create Study	Human evolved regulatory elements modulate genes involved in cortical expansion and neurodevelopmental disease susceptibility.	Nature communications	Won, Hyejung; Huang, Jerry; Opland, Carli K; Hartl, Chris L; Geschwind, Daniel H	June 3, 2019	Not Determined
31131957	Create Study	Meta-analysis of massively parallel reporter assays enables prediction of regulatory function across cell types.	Human mutation	Kreimer, Anat; Yan, Zhongxia; Ahituv, Nadav; Yosef, Nir	September 1, 2019	Not Determined
31083650	Create Study	Rapid antigen diversification through mitotic recombination in the human malaria parasite Plasmodium falciparum.	PLoS biology	Zhang, Xu; Alexander, Noah; Leonardi, Irina; Mason, Christopher; Kirkman, Laura A; Deitsch, Kirk W	May 1, 2019	Not Determined
31056284	Create Study	Selenium Drives a Transcriptional Adaptive Program to Block Ferroptosis and Treat Stroke.	Cell	Alim, Ishraq; Caulfield, Joseph T; Chen, Yingxin; Swarup, Vivek; Geschwind, Daniel H; Ivanova, Elena; Seravalli, Javier; Ai, Youxi; Sansing, Lauren H; Ste Marie, Emma J; Hondal, Robert J; Mukherjee, Sushmita; Cave, John W; Sagdullaev, Botir T; Karuppagounder, Saravanan S; Ratan, Rajiv R	May 16, 2019	Not Determined
31048727	Create Study	The critical importance of basic animal research for neuropsychiatric disorders.	Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology	Bale, Tracy L; Abel, Ted; Akil, Huda; Carlezon Jr, William A; Moghaddam, Bita; Nestler, Eric J; Ressler, Kerry J; Thompson, Scott M	July 1, 2019	Not Determined
30988527	Create Study	A Bayesian framework that integrates multi-omics data and gene networks predicts risk genes from schizophrenia GWAS data.	Nature neuroscience	Wang, Quan; Chen, Rui; Cheng, Feixiong; Wei, Qiang; Ji, Ying; Yang, Hai; Zhong, Xue; Tao, Ran; Wen, Zhexing; Sutcliffe, James S; Liu, Chunyu; Cook, Edwin H; Cox, Nancy J; Li, Bingshan	May 1, 2019	Not Determined
30976116	Create Study	Gene Expression Profiles Associated with Brain Aging are Altered in Schizophrenia.	Scientific reports	Sabunciyan, Sarven	April 11, 2019	Not Determined
30976086	Create Study	Sex-differential DNA methylation and associated regulation networks in human brain implicated in the sex-biased risks of psychiatric disorders.	Molecular psychiatry	Xia, Yan; Dai, Rujia; Wang, Kangli; Jiao, Chuan; Zhang, Chunling; Xu, Yuchen; Li, Honglei; Jing, Xi; Chen, Yu; Jiang, Yi; Kopp, Richard F; Giase, Gina; Chen, Chao; Liu, Chunyu	March 1, 2021	Not Determined
30946827	Create Study	Deconstructing the Gestalt: Mechanisms of Fear, Threat, and Trauma Memory Encoding.	Neuron	Maddox, Stephanie A; Hartmann, Jakob; Ross, Rachel A; Ressler, Kerry J	April 3, 2019	Not Determined
30903684	Create Study	Dissecting differential signals in high-throughput data from complex tissues.	Bioinformatics (Oxford, England)	Li, Ziyi; Wu, Zhijin; Jin, Peng; Wu, Hao	October 15, 2019	Not Determined
30901538	Create Study	Defining the Genetic, Genomic, Cellular, and Diagnostic Architectures of Psychiatric Disorders.	Cell	Sullivan, Patrick F; Geschwind, Daniel H	March 21, 2019	Not Determined
30881380	Create Study	Epigenetic Modifications in Acute Myeloid Leukemia: Prognosis, Treatment, and Heterogeneity.	Frontiers in genetics	Goldman, Samantha L; Hassan, Ciaran; Khunte, Mihir; Soldatenko, Arielle; Jong, Yunji; Afshinnekoo, Ebrahim; Mason, Christopher E	January 1, 2019	Not Determined
30881372	Create Study	The Impact of Heterogeneity on Single-Cell Sequencing.	Frontiers in genetics	Goldman, Samantha L; MacKay, Matthew; Afshinnekoo, Ebrahim; Melnick, Ari M; Wu, Shuxiu; Mason, Christopher E	January 1, 2019	Not Determined
30773596	Create Study	Chromatin organization modulates the origin of heritable structural variations in human genome.	Nucleic acids research	Roychowdhury, Tanmoy; Abyzov, Alexej	April 8, 2019	Not Determined
30718479	Create Study	Single-molecule sequencing detection of N6-methyladenine in microbial reference materials.	Nature communications	McIntyre, Alexa B R; Alexander, Noah; Grigorev, Kirill; Bezdan, Daniela; Sichtig, Heike; Chiu, Charles Y; Mason, Christopher E	February 4, 2019	Not Determined
30692689	Create Study	A genome-wide association study of shared risk across psychiatric disorders implicates gene regulation during fetal neurodevelopment.	Nature neuroscience	Schork, Andrew J; Won, Hyejung; Appadurai, Vivek; Nudel, Ron; Gandal, Mike; Delaneau, Olivier; Revsbech Christiansen, Malene; Hougaard, David M; Bækved-Hansen, Marie; Bybjerg-Grauholm, Jonas; Giørtz Pedersen, Marianne; Agerbo, Esben; Bøcker Pedersen, Carsten; Neale, Benjamin M; Daly, Mark J; Wray, Naomi R; Nordentoft, Merete; Mors, Ole; Børglum, Anders D; Bo Mortensen, Preben; Buil, Alfonso; Thompson, Wesley K; Geschwind, Daniel H; Werge, Thomas	March 1, 2019	Not Determined
30677551	Create Study	Shared and derived features of cellular diversity in the human cerebral cortex.	Current opinion in neurobiology	Miller, Daniel J; Bhaduri, Aparna; Sestan, Nenad; Kriegstein, Arnold	June 1, 2019	Not Determined
30655504	Create Study	Assessment of somatic single-nucleotide variation in brain tissue of cases with schizophrenia.	Translational psychiatry	Fullard, John F; Charney, Alexander W; Voloudakis, Georgios; Uzilov, Andrew V; Haroutunian, Vahram; Roussos, Panos	January 17, 2019	Not Determined
30591030	Create Study	iMEGES: integrated mental-disorder GEnome score by deep neural network for prioritizing the susceptibility genes for mental disorders in personal genomes.	BMC bioinformatics	Khan, Atlas; Liu, Qian; Wang, Kai	December 28, 2018	Not Determined
30555922	Create Study	Using 3D epigenomic maps of primary olfactory neuronal cells from living individuals to understand gene regulation.	Science advances	Rhie, Suhn K; Schreiner, Shannon; Witt, Heather; Armoskus, Chris; Lay, Fides D; Camarena, Adrian; Spitsyna, Valeria N; Guo, Yu; Berman, Benjamin P; Evgrafov, Oleg V; Knowles, James A; Farnham, Peggy J	December 1, 2018	Not Determined
30545965	Create Study	The DGCR5 long noncoding RNA may regulate expression of several schizophrenia-related genes.	Science translational medicine	Meng, Qingtuan; Wang, Kangli; Brunetti, Tonya; Xia, Yan; Jiao, Chuan; Dai, Rujia; Fitzgerald, Dominic; Thomas, Amber; Jay, Lindsey; Eckart, Heather; Grennan, Kay; Imamura-Kawasawa, Yuka; Li, Mingfeng; Sestan, Nenad; White, Kevin P; Chen, Chao; Liu, Chunyu	December 19, 2018	Not Determined
30545964	Create Study	The transcription factor POU3F2 regulates a gene coexpression network in brain tissue from patients with psychiatric disorders.	Science translational medicine	Chen, Chao; Meng, Qingtuan; Xia, Yan; Ding, Chaodong; Wang, Le; Dai, Rujia; Cheng, Lijun; Gunaratne, Preethi; Gibbs, Richard A; Min, Shishi; Coarfa, Cristian; Reid, Jeffrey G; Zhang, Chunling; Jiao, Chuan; Jiang, Yi; Giase, Gina; Thomas, Amber; Fitzgerald, Dominic; Brunetti, Tonya; Shieh, Annie; Xia, Cuihua; Wang, Yongjun; Wang, Yunpeng; Badner, Judith A; Gershon, Elliot S; White, Kevin P; Liu, Chunyu	December 19, 2018	Not Determined
30545881	Create Study	Revealing the brain''s molecular architecture.	Science (New York, N.Y.)	PsychENCODE Consortium	December 14, 2018	Not Determined
30545857	Create Study	Comprehensive functional genomic resource and integrative model for the human brain.	Science (New York, N.Y.)	Wang, Daifeng; Liu, Shuang; Warrell, Jonathan; Won, Hyejung; Shi, Xu; Navarro, Fabio C P; Clarke, Declan; Gu, Mengting; Emani, Prashant; Yang, Yucheng T; Xu, Min; Gandal, Michael J; Lou, Shaoke; Zhang, Jing; Park, Jonathan J; Yan, Chengfei; Rhie, Suhn Kyong; Manakongtreecheep, Kasidet; Zhou, Holly; Nathan, Aparna; Peters, Mette; Mattei, Eugenio; Fitzgerald, Dominic; Brunetti, Tonya; Moore, Jill; Jiang, Yan; Girdhar, Kiran; Hoffman, Gabriel E; Kalayci, Selim; Gümüş, Zeynep H; Crawford, Gregory E; PsychENCODE Consortium; Roussos, Panos; Akbarian, Schahram; Jaffe, Andrew E; White, Kevin P; Weng, Zhiping; Sestan, Nenad; Geschwind, Daniel H; Knowles, James A; Gerstein, Mark B	December 14, 2018	Not Determined
30545856	Create Study	Transcriptome-wide isoform-level dysregulation in ASD, schizophrenia, and bipolar disorder.	Science (New York, N.Y.)	Gandal, Michael J; Zhang, Pan; Hadjimichael, Evi; Walker, Rebecca L; Chen, Chao; Liu, Shuang; Won, Hyejung; van Bakel, Harm; Varghese, Merina; Wang, Yongjun; Shieh, Annie W; Haney, Jillian; Parhami, Sepideh; Belmont, Judson; Kim, Minsoo; Moran Losada, Patricia; Khan, Zenab; Mleczko, Justyna; Xia, Yan; Dai, Rujia; Wang, Daifeng; Yang, Yucheng T; Xu, Min; Fish, Kenneth; Hof, Patrick R; Warrell, Jonathan; Fitzgerald, Dominic; White, Kevin; Jaffe, Andrew E; PsychENCODE Consortium; Peters, Mette A; Gerstein, Mark; Liu, Chunyu; Iakoucheva, Lilia M; Pinto, Dalila; Geschwind, Daniel H	December 14, 2018	Not Determined
30545855	Create Study	Spatiotemporal transcriptomic divergence across human and macaque brain development.	Science (New York, N.Y.)	Zhu, Ying; Sousa, André M M; Gao, Tianliuyun; Skarica, Mario; Li, Mingfeng; Santpere, Gabriel; Esteller-Cucala, Paula; Juan, David; Ferrández-Peral, Luis; Gulden, Forrest O; Yang, Mo; Miller, Daniel J; Marques-Bonet, Tomas; Imamura Kawasawa, Yuka; Zhao, Hongyu; Sestan, Nenad	December 14, 2018	Not Determined
30545854	Create Study	Integrative functional genomic analysis of human brain development and neuropsychiatric risks.	Science (New York, N.Y.)	Li, Mingfeng; Santpere, Gabriel; Imamura Kawasawa, Yuka; Evgrafov, Oleg V; Gulden, Forrest O; Pochareddy, Sirisha; Sunkin, Susan M; Li, Zhen; Shin, Yurae; Zhu, Ying; Sousa, André M M; Werling, Donna M; Kitchen, Robert R; Kang, Hyo Jung; Pletikos, Mihovil; Choi, Jinmyung; Muchnik, Sydney; Xu, Xuming; Wang, Daifeng; Lorente-Galdos, Belen; Liu, Shuang; Giusti-Rodríguez, Paola; Won, Hyejung; de Leeuw, Christiaan A; Pardiñas, Antonio F; BrainSpan Consortium; PsychENCODE Consortium; PsychENCODE Developmental Subgroup; Hu, Ming; Jin, Fulai; Li, Yun; Owen, Michael J; O'Donovan, Michael C; Walters, James T R; Posthuma, Danielle; Reimers, Mark A; Levitt, Pat; Weinberger, Daniel R; Hyde, Thomas M; Kleinman, Joel E; Geschwind, Daniel H; Hawrylycz, Michael J; State, Matthew W; Sanders, Stephan J; Sullivan, Patrick F; Gerstein, Mark B; Lein, Ed S; Knowles, James A; Sestan, Nenad	December 14, 2018	Not Determined
30545853	Create Study	Transcriptome and epigenome landscape of human cortical development modeled in organoids.	Science (New York, N.Y.)	Amiri, Anahita; Coppola, Gianfilippo; Scuderi, Soraya; Wu, Feinan; Roychowdhury, Tanmoy; Liu, Fuchen; Pochareddy, Sirisha; Shin, Yurae; Safi, Alexias; Song, Lingyun; Zhu, Ying; Sousa, André M M; PsychENCODE Consortium; Gerstein, Mark; Crawford, Gregory E; Sestan, Nenad; Abyzov, Alexej; Vaccarino, Flora M	December 14, 2018	Not Determined
30545852	Create Study	Genome-wide de novo risk score implicates promoter variation in autism spectrum disorder.	Science (New York, N.Y.)	An, Joon-Yong; Lin, Kevin; Zhu, Lingxue; Werling, Donna M; Dong, Shan; Brand, Harrison; Wang, Harold Z; Zhao, Xuefang; Schwartz, Grace B; Collins, Ryan L; Currall, Benjamin B; Dastmalchi, Claudia; Dea, Jeanselle; Duhn, Clif; Gilson, Michael C; Klei, Lambertus; Liang, Lindsay; Markenscoff-Papadimitriou, Eirene; Pochareddy, Sirisha; Ahituv, Nadav; Buxbaum, Joseph D; Coon, Hilary; Daly, Mark J; Kim, Young Shin; Marth, Gabor T; Neale, Benjamin M; Quinlan, Aaron R; Rubenstein, John L; Sestan, Nenad; State, Matthew W; Willsey, A Jeremy; Talkowski, Michael E; Devlin, Bernie; Roeder, Kathryn; Sanders, Stephan J	December 14, 2018	Not Determined
30545851	Create Study	Neuron-specific signatures in the chromosomal connectome associated with schizophrenia risk.	Science (New York, N.Y.)	Rajarajan, Prashanth; Borrman, Tyler; Liao, Will; Schrode, Nadine; Flaherty, Erin; Casiño, Charlize; Powell, Samuel; Yashaswini, Chittampalli; LaMarca, Elizabeth A; Kassim, Bibi; Javidfar, Behnam; Espeso-Gil, Sergio; Li, Aiqun; Won, Hyejung; Geschwind, Daniel H; Ho, Seok-Man; MacDonald, Matthew; Hoffman, Gabriel E; Roussos, Panos; Zhang, Bin; Hahn, Chang-Gyu; Weng, Zhiping; Brennand, Kristen J; Akbarian, Schahram	December 14, 2018	Not Determined
30420340	Create Study	Next-Generation Sequencing in Autism Spectrum Disorder.	Cold Spring Harbor perspectives in medicine	Sanders, Stephan J	August 1, 2019	Not Determined
30359605	Create Study	Lost in Translation: Traversing the Complex Path from Genomics to Therapeutics in Autism Spectrum Disorder.	Neuron	Sestan, Nenad; State, Matthew W	October 24, 2018	Not Determined
30318146	Create Study	The 7q11.23 Protein DNAJC30 Interacts with ATP Synthase and Links Mitochondria to Brain Development.	Cell	Tebbenkamp, Andrew T N; Varela, Luis; Choi, Jinmyung; Paredes, Miguel I; Giani, Alice M; Song, Jae Eun; Sestan-Pesa, Matija; Franjic, Daniel; Sousa, André M M; Liu, Zhong-Wu; Li, Mingfeng; Bichsel, Candace; Koch, Marco; Szigeti-Buck, Klara; Liu, Fuchen; Li, Zhuo; Kawasawa, Yuka I; Paspalas, Constantinos D; Mineur, Yann S; Prontera, Paolo; Merla, Giuseppe; Picciotto, Marina R; Arnsten, Amy F T; Horvath, Tamas L; Sestan, Nenad	November 1, 2018	Not Determined
30283037	Create Study	Adolescent exposure to Δ9-tetrahydrocannabinol alters the transcriptional trajectory and dendritic architecture of prefrontal pyramidal neurons.	Molecular psychiatry	Miller, Michael L; Chadwick, Benjamin; Dickstein, Dara L; Purushothaman, Immanuel; Egervari, Gabor; Rahman, Tanni; Tessereau, Chloe; Hof, Patrick R; Roussos, Panos; Shen, Li; Baxter, Mark G; Hurd, Yasmin L	April 1, 2019	Not Determined
30263963	Create Study	A unique role for DNA (hydroxy)methylation in epigenetic regulation of human inhibitory neurons.	Science advances	Kozlenkov, Alexey; Li, Junhao; Apontes, Pasha; Hurd, Yasmin L; Byne, William M; Koonin, Eugene V; Wegner, Michael; Mukamel, Eran A; Dracheva, Stella	September 1, 2018	Not Determined
30224808	Create Study	Enhancers active in dopamine neurons are a primary link between genetic variation and neuropsychiatric disease.	Nature neuroscience	Dong, Xianjun; Liao, Zhixiang; Gritsch, David; Hadzhiev, Yavor; Bai, Yunfei; Locascio, Joseph J; Guennewig, Boris; Liu, Ganqiang; Blauwendraat, Cornelis; Wang, Tao; Adler, Charles H; Hedreen, John C; Faull, Richard L M; Frosch, Matthew P; Nelson, Peter T; Rizzu, Patrizia; Cooper, Antony A; Heutink, Peter; Beach, Thomas G; Mattick, John S; Müller, Ferenc; Scherzer, Clemens R	October 1, 2018	Not Determined
30177255	Create Study	Transcriptomic Evidence for Alterations in Astrocytes and Parvalbumin Interneurons in Subjects With Bipolar Disorder and Schizophrenia.	Biological psychiatry	Toker, Lilah; Mancarci, Burak Ogan; Tripathy, Shreejoy; Pavlidis, Paul	December 1, 2018	Not Determined
30125121	Create Study	Isoform-Level Interpretation of High-Throughput Proteomics Data Enabled by Deep Integration with RNA-seq.	Journal of proteome research	Carlyle, Becky C; Kitchen, Robert R; Zhang, Jing; Wilson, Rashaun S; Lam, Tukiet T; Rozowsky, Joel S; Williams, Kenneth R; Sestan, Nenad; Gerstein, Mark B; Nairn, Angus C	October 5, 2018	Not Determined
30104368	Create Study	N6-methyladenosine modification of hepatitis B virus RNA differentially regulates the viral life cycle.	Proceedings of the National Academy of Sciences of the United States of America	Imam, Hasan; Khan, Mohsin; Gokhale, Nandan S; McIntyre, Alexa B R; Kim, Geon-Woo; Jang, Jae Young; Kim, Seong-Jun; Mason, Christopher E; Horner, Stacy M; Siddiqui, Aleem	August 28, 2018	Not Determined
30087329	Create Study	Evaluation of chromatin accessibility in prefrontal cortex of individuals with schizophrenia.	Nature communications	Bryois, Julien; Garrett, Melanie E; Song, Lingyun; Safi, Alexias; Giusti-Rodriguez, Paola; Johnson, Graham D; Shieh, Annie W; Buil, Alfonso; Fullard, John F; Roussos, Panos; Sklar, Pamela; Akbarian, Schahram; Haroutunian, Vahram; Stockmeier, Craig A; Wray, Gregory A; White, Kevin P; Liu, Chunyu; Reddy, Timothy E; Ashley-Koch, Allison; Sullivan, Patrick F; Crawford, Gregory E	August 7, 2018	Not Determined
30054570	Create Study	Brain circuit dysfunction in post-traumatic stress disorder: from mouse to man.	Nature reviews. Neuroscience	Fenster, Robert J; Lebois, Lauren A M; Ressler, Kerry J; Suh, Junghyup	September 1, 2018	Not Determined
30053424	Create Study	The Psychiatric Cell Map Initiative: A Convergent Systems Biological Approach to Illuminating Key Molecular Pathways in Neuropsychiatric Disorders.	Cell	Willsey, A Jeremy; Morris, Montana T; Wang, Sheng; Willsey, Helen R; Sun, Nawei; Teerikorpi, Nia; Baum, Tierney B; Cagney, Gerard; Bender, Kevin J; Desai, Tejal A; Srivastava, Deepak; Davis, Graeme W; Doudna, Jennifer; Chang, Edward; Sohal, Vikaas; Lowenstein, Daniel H; Li, Hao; Agard, David; Keiser, Michael J; Shoichet, Brian; von Zastrow, Mark; Mucke, Lennart; Finkbeiner, Steven; Gan, Li; Sestan, Nenad; Ward, Michael E; Huttenhain, Ruth; Nowakowski, Tomasz J; Bellen, Hugo J; Frank, Loren M; Khokha, Mustafa K; Lifton, Richard P; Kampmann, Martin; Ideker, Trey; State, Matthew W; Krogan, Nevan J	July 26, 2018	Not Determined
30050107	Create Study	Developmental and genetic regulation of the human cortex transcriptome illuminate schizophrenia pathogenesis.	Nature neuroscience	Jaffe, Andrew E; Straub, Richard E; Shin, Joo Heon; Tao, Ran; Gao, Yuan; Collado-Torres, Leonardo; Kam-Thong, Tony; Xi, Hualin S; Quan, Jie; Chen, Qiang; Colantuoni, Carlo; Ulrich, William S; Maher, Brady J; Deep-Soboslay, Amy; BrainSeq Consortium; Cross, Alan J; Brandon, Nicholas J; Leek, Jeffrey T; Hyde, Thomas M; Kleinman, Joel E; Weinberger, Daniel R	August 1, 2018	Not Determined
30038276	Create Study	Cell-specific histone modification maps in the human frontal lobe link schizophrenia risk to the neuronal epigenome.	Nature neuroscience	Girdhar, Kiran; Hoffman, Gabriel E; Jiang, Yan; Brown, Leanne; Kundakovic, Marija; Hauberg, Mads E; Francoeur, Nancy J; Wang, Ying-Chih; Shah, Hardik; Kavanagh, David H; Zharovsky, Elizabeth; Jacobov, Rivka; Wiseman, Jennifer R; Park, Royce; Johnson, Jessica S; Kassim, Bibi S; Sloofman, Laura; Mattei, Eugenio; Weng, Zhiping; Sieberts, Solveig K; Peters, Mette A; Harris, Brent T; Lipska, Barbara K; Sklar, Pamela; Roussos, Panos; Akbarian, Schahram	August 1, 2018	Not Determined
29985970	Create Study	BrainEXP: a database featuring with spatiotemporal expression variations and co-expression organizations in human brains.	Bioinformatics (Oxford, England)	Jiao, Chuan; Yan, Pengpeng; Xia, Cuihua; Shen, Zhaoming; Tan, Zexi; Tan, Yanyan; Wang, Kangli; Jiang, Yi; Huang, Lingling; Dai, Rujia; Wei, Yu; Xia, Yan; Meng, Qingtuan; Ouyang, Yanmei; Yi, Liu; Duan, Fangyuan; Dai, Jiacheng; Zhao, Shunan; Liu, Chunyu; Chen, Chao	January 1, 2019	Not Determined
29955163	Create Study	Molecular windows into the human brain for psychiatric disorders.	Molecular psychiatry	Egervari, Gabor; Kozlenkov, Alexey; Dracheva, Stella; Hurd, Yasmin L	May 1, 2019	Not Determined
29945882	Create Study	An atlas of chromatin accessibility in the adult human brain.	Genome research	Fullard, John F; Hauberg, Mads E; Bendl, Jaroslav; Egervari, Gabor; Cirnaru, Maria-Daniela; Reach, Sarah M; Motl, Jan; Ehrlich, Michelle E; Hurd, Yasmin L; Roussos, Panos	August 1, 2018	Not Determined
29942042	Create Study	A decade in psychiatric GWAS research.	Molecular psychiatry	Horwitz, Tanya; Lam, Katie; Chen, Yu; Xia, Yan; Liu, Chunyu	March 1, 2019	Not Determined
29892006	Create Study	Brain Cell Type Specific Gene Expression and Co-expression Network Architectures.	Scientific reports	McKenzie, Andrew T; Wang, Minghui; Hauberg, Mads E; Fullard, John F; Kozlenkov, Alexey; Keenan, Alexandra; Hurd, Yasmin L; Dracheva, Stella; Casaccia, Patrizia; Roussos, Panos; Zhang, Bin	June 11, 2018	Not Determined
29740122	Create Study	Differential activity of transcribed enhancers in the prefrontal cortex of 537 cases with schizophrenia and controls.	Molecular psychiatry	Hauberg, Mads E; Fullard, John F; Zhu, Lingxue; Cohain, Ariella T; Giambartolomei, Claudia; Misir, Ruth; Reach, Sarah; Johnson, Jessica S; Wang, Minghui; Mattheisen, Manuel; Børglum, Anders Dupont; Zhang, Bin; Sieberts, Solveig K; Peters, Mette A; Domenici, Enrico; Schadt, Eric E; Devlin, Bernie; Sklar, Pamela; Roeder, Kathryn; Roussos, Panos; CommonMind Consortium	November 1, 2019	Not Determined
29700473	Create Study	An analytical framework for whole-genome sequence association studies and its implications for autism spectrum disorder.	Nature genetics	Werling, Donna M; Brand, Harrison; An, Joon-Yong; Stone, Matthew R; Zhu, Lingxue; Glessner, Joseph T; Collins, Ryan L; Dong, Shan; Layer, Ryan M; Markenscoff-Papadimitriou, Eirene; Farrell, Andrew; Schwartz, Grace B; Wang, Harold Z; Currall, Benjamin B; Zhao, Xuefang; Dea, Jeanselle; Duhn, Clif; Erdman, Carolyn A; Gilson, Michael C; Yadav, Rachita; Handsaker, Robert E; Kashin, Seva; Klei, Lambertus; Mandell, Jeffrey D; Nowakowski, Tomasz J; Liu, Yuwen; Pochareddy, Sirisha; Smith, Louw; Walker, Michael F; Waterman, Matthew J; He, Xin; Kriegstein, Arnold R; Rubenstein, John L; Sestan, Nenad; McCarroll, Steven A; Neale, Benjamin M; Coon, Hilary; Willsey, A Jeremy; Buxbaum, Joseph D; Daly, Mark J; State, Matthew W; Quinlan, Aaron R; Marth, Gabor T; Roeder, Kathryn; Devlin, Bernie; Talkowski, Michael E; Sanders, Stephan J	April 26, 2018	Not Determined
29691375	Create Study	THC exposure of human iPSC neurons impacts genes associated with neuropsychiatric disorders.	Translational psychiatry	Guennewig, Boris; Bitar, Maina; Obiorah, Ifeanyi; Hanks, James; O'Brien, Elizabeth A; Kaczorowski, Dominik C; Hurd, Yasmin L; Roussos, Panos; Brennand, Kristen J; Barry, Guy	April 25, 2018	Not Determined
29632383	Create Study	Transcriptome-wide association study of schizophrenia and chromatin activity yields mechanistic disease insights.	Nature genetics	Gusev, Alexander; Mancuso, Nicholas; Won, Hyejung; Kousi, Maria; Finucane, Hilary K; Reshef, Yakir; Song, Lingyun; Safi, Alexias; Schizophrenia Working Group of the Psychiatric Genomics Consortium; McCarroll, Steven; Neale, Benjamin M; Ophoff, Roel A; O'Donovan, Michael C; Crawford, Gregory E; Geschwind, Daniel H; Katsanis, Nicholas; Sullivan, Patrick F; Pasaniuc, Bogdan; Price, Alkes L	April 1, 2018	Not Determined
29632380	Create Study	Heritability enrichment of specifically expressed genes identifies disease-relevant tissues and cell types.	Nature genetics	Finucane, Hilary K; Reshef, Yakir A; Anttila, Verneri; Slowikowski, Kamil; Gusev, Alexander; Byrnes, Andrea; Gazal, Steven; Loh, Po-Ru; Lareau, Caleb; Shoresh, Noam; Genovese, Giulio; Saunders, Arpiar; Macosko, Evan; Pollack, Samuela; Brainstorm Consortium; Perry, John R B; Buenrostro, Jason D; Bernstein, Bradley E; Raychaudhuri, Soumya; McCarroll, Steven; Neale, Benjamin M; Price, Alkes L	April 1, 2018	Not Determined
29605855	Create Study	Defining Regulatory Elements in the Human Genome Using Nucleosome Occupancy and Methylome Sequencing (NOMe-Seq).	Methods in molecular biology (Clifton, N.J.)	Rhie, Suhn Kyong; Schreiner, Shannon; Farnham, Peggy J	January 1, 2018	Not Determined
29579179	Create Study	A Bayesian framework for multiple trait colocalization from summary association statistics.	Bioinformatics (Oxford, England)	Giambartolomei, Claudia; Zhenli Liu, Jimmy; Zhang, Wen; Hauberg, Mads; Shi, Huwenbo; Boocock, James; Pickrell, Joe; Jaffe, Andrew E; CommonMind Consortium; Pasaniuc, Bogdan; Roussos, Panos	August 1, 2018	Not Determined
29562236	Create Study	De novo mutations in regulatory elements in neurodevelopmental disorders.	Nature	Short, Patrick J; McRae, Jeremy F; Gallone, Giuseppe; Sifrim, Alejandro; Won, Hyejung; Geschwind, Daniel H; Wright, Caroline F; Firth, Helen V; FitzPatrick, David R; Barrett, Jeffrey C; Hurles, Matthew E	March 29, 2018	Not Determined
29483656	Create Study	Common schizophrenia alleles are enriched in mutation-intolerant genes and in regions under strong background selection.	Nature genetics	Pardiñas, Antonio F; Holmans, Peter; Pocklington, Andrew J; Escott-Price, Valentina; Ripke, Stephan; Carrera, Noa; Legge, Sophie E; Bishop, Sophie; Cameron, Darren; Hamshere, Marian L; Han, Jun; Hubbard, Leon; Lynham, Amy; Mantripragada, Kiran; Rees, Elliott; MacCabe, James H; McCarroll, Steven A; Baune, Bernhard T; Breen, Gerome; Byrne, Enda M; Dannlowski, Udo; Eley, Thalia C; Hayward, Caroline; Martin, Nicholas G; McIntosh, Andrew M; Plomin, Robert; Porteous, David J; Wray, Naomi R; Caballero, Armando; Geschwind, Daniel H; Huckins, Laura M; Ruderfer, Douglas M; Santiago, Enrique; Sklar, Pamela; Stahl, Eli A; Won, Hyejung; Agerbo, Esben; Als, Thomas D; Andreassen, Ole A; Bækvad-Hansen, Marie; Mortensen, Preben Bo; Pedersen, Carsten Bøcker; Børglum, Anders D; Bybjerg-Grauholm, Jonas; Djurovic, Srdjan; Durmishi, Naser; Pedersen, Marianne Giørtz; Golimbet, Vera; Grove, Jakob; Hougaard, David M; Mattheisen, Manuel; Molden, Espen; Mors, Ole; Nordentoft, Merete; Pejovic-Milovancevic, Milica; Sigurdsson, Engilbert; Silagadze, Teimuraz; Hansen, Christine Søholm; Stefansson, Kari; Stefansson, Hreinn; Steinberg, Stacy; Tosato, Sarah; Werge, Thomas; GERAD1 Consortium; CRESTAR Consortium; Collier, David A; Rujescu, Dan; Kirov, George; Owen, Michael J; O'Donovan, Michael C; Walters, James T R	March 1, 2018	Not Determined
29472441	Create Study	Early emergence of cortical interneuron diversity in the mouse embryo.	Science (New York, N.Y.)	Mi, Da; Li, Zhen; Lim, Lynette; Li, Mingfeng; Moissidis, Monika; Yang, Yifei; Gao, Tianliuyun; Hu, Tim Xiaoming; Pratt, Thomas; Price, David J; Sestan, Nenad; Marín, Oscar	April 6, 2018	Not Determined
29469594	Create Study	Positional effects revealed in Illumina methylation array and the impact on analysis.	Epigenomics	Jiao, Chuan; Zhang, Chunling; Dai, Rujia; Xia, Yan; Wang, Kangli; Giase, Gina; Chen, Chao; Liu, Chunyu	May 1, 2018	Not Determined
29439242	Create Study	Shared molecular neuropathology across major psychiatric disorders parallels polygenic overlap.	Science (New York, N.Y.)	Gandal, Michael J; Haney, Jillian R; Parikshak, Neelroop N; Leppa, Virpi; Ramaswami, Gokul; Hartl, Chris; Schork, Andrew J; Appadurai, Vivek; Buil, Alfonso; Werge, Thomas M; Liu, Chunyu; White, Kevin P; CommonMind Consortium; PsychENCODE Consortium; iPSYCH-BROAD Working Group; Horvath, Steve; Geschwind, Daniel H	February 9, 2018	Not Determined
29351917	Create Study	A Novel Method for Rapid Molecular Subgrouping of Medulloblastoma.	Clinical cancer research : an official journal of the American Association for Cancer Research	Gómez, Soledad; Garrido-Garcia, Alícia; Garcia-Gerique, Laura; Lemos, Isadora; Suñol, Mariona; de Torres, Carmen; Kulis, Marta; Pérez-Jaume, Sara; Carcaboso, Ángel M; Luu, Betty; Kieran, Mark W; Jabado, Nada; Kozlenkov, Alexey; Dracheva, Stella; Ramaswamy, Vijay; Hovestadt, Volker; Johann, Pascal; Jones, David T W; Pfister, Stefan M; Morales La Madrid, Andrés; Cruz, Ofelia; Taylor, Michael D; Martin-Subero, Jose-Ignacio; Mora, Jaume; Lavarino, Cinzia	March 15, 2018	Not Determined
29307494	Create Study	The Dynamic Landscape of Open Chromatin during Human Cortical Neurogenesis.	Cell	de la Torre-Ubieta, Luis; Stein, Jason L; Won, Hyejung; Opland, Carli K; Liang, Dan; Lu, Daning; Geschwind, Daniel H	January 11, 2018	Not Determined
29217587	Create Study	Different mutational rates and mechanisms in human cells at pregastrulation and neurogenesis.	Science (New York, N.Y.)	Bae, Taejeong; Tomasini, Livia; Mariani, Jessica; Zhou, Bo; Roychowdhury, Tanmoy; Franjic, Daniel; Pletikos, Mihovil; Pattni, Reenal; Chen, Bo-Juen; Venturini, Elisa; Riley-Gillis, Bridget; Sestan, Nenad; Urban, Alexander E; Abyzov, Alexej; Vaccarino, Flora M	February 2, 2018	Not Determined
29184206	Create Study	A multiregional proteomic survey of the postnatal human brain.	Nature neuroscience	Carlyle, Becky C; Kitchen, Robert R; Kanyo, Jean E; Voss, Edward Z; Pletikos, Mihovil; Sousa, André M M; Lam, TuKiet T; Gerstein, Mark B; Sestan, Nenad; Nairn, Angus C	December 1, 2017	Not Determined
29170230	Create Study	Molecular and cellular reorganization of neural circuits in the human lineage.	Science (New York, N.Y.)	Sousa, André M M; Zhu, Ying; Raghanti, Mary Ann; Kitchen, Robert R; Onorati, Marco; Tebbenkamp, Andrew T N; Stutz, Bernardo; Meyer, Kyle A; Li, Mingfeng; Kawasawa, Yuka Imamura; Liu, Fuchen; Perez, Raquel Garcia; Mele, Marta; Carvalho, Tiago; Skarica, Mario; Gulden, Forrest O; Pletikos, Mihovil; Shibata, Akemi; Stephenson, Alexa R; Edler, Melissa K; Ely, John J; Elsworth, John D; Horvath, Tamas L; Hof, Patrick R; Hyde, Thomas M; Kleinman, Joel E; Weinberger, Daniel R; Reimers, Mark; Lifton, Richard P; Mane, Shrikant M; Noonan, James P; State, Matthew W; Lein, Ed S; Knowles, James A; Marques-Bonet, Tomas; Sherwood, Chet C; Gerstein, Mark B; Sestan, Nenad	November 24, 2017	Not Determined
29117547	Create Study	A Prostate Cancer Risk Element Functions as a Repressive Loop that Regulates HOXA13.	Cell reports	Luo, Zhifei; Rhie, Suhn Kyong; Lay, Fides D; Farnham, Peggy J	November 7, 2017	Not Determined
29098072	Create Study	Molecular underpinnings of neurodegenerative disorders: striatal-enriched protein tyrosine phosphatase signaling and synaptic plasticity.	F1000Research	Lombroso, Paul J; Ogren, Marilee; Kurup, Pradeep; Nairn, Angus C	January 1, 2016	Not Determined
29043067	Create Study	recount workflow: Accessing over 70,000 human RNA-seq samples with Bioconductor.	F1000Research	Collado-Torres, Leonardo; Nellore, Abhinav; Jaffe, Andrew E	January 1, 2017	Not Determined
29020636	Create Study	Self-Organized Cerebral Organoids with Human-Specific Features Predict Effective Drugs to Combat Zika Virus Infection.	Cell reports	Watanabe, Momoko; Buth, Jessie E; Vishlaghi, Neda; de la Torre-Ubieta, Luis; Taxidis, Jiannis; Khakh, Baljit S; Coppola, Giovanni; Pearson, Caroline A; Yamauchi, Ken; Gong, Danyang; Dai, Xinghong; Damoiseaux, Robert; Aliyari, Roghiyh; Liebscher, Simone; Schenke-Layland, Katja; Caneda, Christine; Huang, Eric J; Zhang, Ye; Cheng, Genhong; Geschwind, Daniel H; Golshani, Peyman; Sun, Ren; Novitch, Bennett G	October 10, 2017	Not Determined
28794184	Create Study	Post-transcriptional regulation of mouse neurogenesis by Pumilio proteins.	Genes & development	Zhang, Meng; Chen, Dong; Xia, Jing; Han, Wenqi; Cui, Xiekui; Neuenkirchen, Nils; Hermes, Gretchen; Sestan, Nenad; Lin, Haifan	July 1, 2017	Not Determined
28783139	Create Study	Antipsychotic-induced Hdac2 transcription via NF-κB leads to synaptic and cognitive side effects.	Nature neuroscience	Ibi, Daisuke; de la Fuente Revenga, Mario; Kezunovic, Nebojsa; Muguruza, Carolina; Saunders, Justin M; Gaitonde, Supriya A; Moreno, José L; Ijaz, Maryum K; Santosh, Vishaka; Kozlenkov, Alexey; Holloway, Terrell; Seto, Jeremy; García-Bea, Aintzane; Kurita, Mitsumasa; Mosley, Grace E; Jiang, Yan; Christoffel, Daniel J; Callado, Luis F; Russo, Scott J; Dracheva, Stella; López-Giménez, Juan F; Ge, Yongchao; Escalante, Carlos R; Meana, J Javier; Akbarian, Schahram; Huntley, George W; González-Maeso, Javier	September 1, 2017	Not Determined
28751609	Create Study	Control of species-dependent cortico-motoneuronal connections underlying manual dexterity.	Science (New York, N.Y.)	Gu, Zirong; Kalambogias, John; Yoshioka, Shin; Han, Wenqi; Li, Zhuo; Kawasawa, Yuka Imamura; Pochareddy, Sirisha; Li, Zhen; Liu, Fuchen; Xu, Xuming; Wijeratne, H. R. Sagara; Ueno, Masaki; Blatz, Emily; Salomone, Joseph; Kumanogoh, Atsushi; Rasin, Mladen-Roko; Gebelein, Brian; Weirauch, Matthew T; Sestan, Nenad; Martin, John H; Yoshida, Yutaka	July 28, 2017	Not Determined
28708995	Create Study	Evolution of the Human Nervous System Function, Structure, and Development.	Cell	Sousa, André M M; Meyer, Kyle A; Santpere, Gabriel; Gulden, Forrest O; Sestan, Nenad	July 13, 2017	Not Determined
28686855	Create Study	Large-Scale Identification of Common Trait and Disease Variants Affecting Gene Expression.	American journal of human genetics	Hauberg, Mads Engel; Zhang, Wen; Giambartolomei, Claudia; Franzén, Oscar; Morris, David L; Vyse, Timothy J; Ruusalepp, Arno; CommonMind Consortium; Sklar, Pamela; Schadt, Eric E; Björkegren, Johan L M; Roussos, Panos	July 6, 2017	Not Determined
28671686	Create Study	The methyltransferase SETDB1 regulates a large neuron-specific topological chromatin domain.	Nature genetics	Jiang, Yan; Loh, Yong-Hwee Eddie; Rajarajan, Prashanth; Hirayama, Teruyoshi; Liao, Will; Kassim, Bibi S; Javidfar, Behnam; Hartley, Brigham J; Kleofas, Lisa; Park, Royce B; Labonte, Benoit; Ho, Seok-Man; Chandrasekaran, Sandhya; Do, Catherine; Ramirez, Brianna R; Peter, Cyril J; C W, Julia T; Safaie, Brian M; Morishita, Hirofumi; Roussos, Panos; Nestler, Eric J; Schaefer, Anne; Tycko, Benjamin; Brennand, Kristen J; Yagi, Takeshi; Shen, Li; Akbarian, Schahram	August 1, 2017	Not Determined
28634288	Create Study	qSVA framework for RNA quality correction in differential expression analysis.	Proceedings of the National Academy of Sciences of the United States of America	Jaffe, Andrew E; Tao, Ran; Norris, Alexis L; Kealhofer, Marc; Nellore, Abhinav; Shin, Joo Heon; Kim, Dewey; Jia, Yankai; Hyde, Thomas M; Kleinman, Joel E; Straub, Richard E; Leek, Jeffrey T; Weinberger, Daniel R	July 3, 2017	Not Determined
28552197	Create Study	Large-Scale Identification of Common Trait and Disease Variants Affecting Gene Expression.	American journal of human genetics	Hauberg, Mads Engel; Zhang, Wen; Giambartolomei, Claudia; Franzén, Oscar; Morris, David L; Vyse, Timothy J; Ruusalepp, Arno; CommonMind Consortium; Sklar, Pamela; Schadt, Eric E; Björkegren, Johan L M; Roussos, Panos	June 1, 2017	Not Determined
28533516	Create Study	ASD restricted and repetitive behaviors associated at 17q21.33: genes prioritized by expression in fetal brains.	Molecular psychiatry	Cantor, R M; Navarro, L; Won, H; Walker, R L; Lowe, J K; Geschwind, D H	April 1, 2018	Not Determined
28431175	Create Study	minepath.org: a free interactive pathway analysis web server.	Nucleic acids research	Koumakis, Lefteris; Roussos, Panos; Potamias, George	July 3, 2017	Not Determined
28398307	Create Study	Reproducible RNA-seq analysis using recount2.	Nature biotechnology	Collado-Torres, Leonardo; Nellore, Abhinav; Kammers, Kai; Ellis, Shannon E; Taub, Margaret A; Hansen, Kasper D; Jaffe, Andrew E; Langmead, Ben; Leek, Jeffrey T	April 11, 2017	Not Determined
28335009	Create Study	Open chromatin profiling of human postmortem brain infers functional roles for non-coding schizophrenia loci.	Human molecular genetics	Fullard, John F; Giambartolomei, Claudia; Hauberg, Mads E; Xu, Ke; Voloudakis, Georgios; Shao, Zhiping; Bare, Christopher; Dudley, Joel T; Mattheisen, Manuel; Robakis, Nikolaos K; Haroutunian, Vahram; Roussos, Panos	May 15, 2017	Not Determined
28334242	Create Study	Reciprocal Connections Between Cortex and Thalamus Contribute to Retinal Axon Targeting to Dorsal Lateral Geniculate Nucleus.	Cerebral cortex (New York, N.Y. : 1991)	Diao, Yupu; Cui, Liyuan; Chen, Yuqing; Burbridge, Timothy J; Han, Wenqi; Wirth, Brunhilde; Sestan, Nenad; Crair, Michael C; Zhang, Jiayi	April 1, 2018	Not Determined
28256214	Create Study	Opposing Effects on NaV1.2 Function Underlie Differences Between SCN2A Variants Observed in Individuals With Autism Spectrum Disorder or Infantile Seizures.	Biological psychiatry	Ben-Shalom, Roy; Keeshen, Caroline M; Berrios, Kiara N; An, Joon Y; Sanders, Stephan J; Bender, Kevin J	August 1, 2017	Not Determined
28253736	Create Study	Identification of Developmental and Behavioral Markers Associated With Genetic Abnormalities in Autism Spectrum Disorder.	The American journal of psychiatry	Bishop, Somer L; Farmer, Cristan; Bal, Vanessa; Robinson, Elise B; Willsey, A Jeremy; Werling, Donna M; Havdahl, Karoline Alexandra; Sanders, Stephan J; Thurm, Audrey	June 1, 2017	Not Determined
28252112	Create Study	Parallel changes in serum proteins and diffusion tensor imaging in methamphetamine-associated psychosis.	Scientific reports	Breen, Michael S; Uhlmann, Anne; Ozcan, Sureyya; Chan, Man; Pinto, Dalila; Bahn, Sabine; Stein, Dan J	March 2, 2017	Not Determined
28204568	Create Study	Differential Gene Expression in the Human Brain Is Associated with Conserved, but Not Accelerated, Noncoding Sequences.	Molecular biology and evolution	Meyer, Kyle A; Marques-Bonet, Tomas; Sestan, Nenad	May 1, 2017	Not Determined
28082376	Create Study	Axonal ribosomes and mRNAs associate with fragile X granules in adult rodent and human brains.	Human molecular genetics	Akins, Michael R; Berk-Rauch, Hanna E; Kwan, Kenneth Y; Mitchell, Molly E; Shepard, Katherine A; Korsak, Lulu I T; Stackpole, Emily E; Warner-Schmidt, Jennifer L; Sestan, Nenad; Cameron, Heather A; Fallon, Justin R	January 1, 2017	Not Determined
27930330	Create Study	Simultaneous dimension reduction and adjustment for confounding variation.	Proceedings of the National Academy of Sciences of the United States of America	Lin, Zhixiang; Yang, Can; Zhu, Ying; Duchi, John; Fu, Yao; Wang, Yong; Jiang, Bai; Zamanighomi, Mahdi; Xu, Xuming; Li, Mingfeng; Sestan, Nenad; Zhao, Hongyu; Wong, Wing Hung	December 20, 2016	Not Determined
27891212	Create Study	The role of sex-differential biology in risk for autism spectrum disorder.	Biology of sex differences	Werling, Donna M	January 1, 2016	Not Determined
27863698	Create Study	Striatal H3K27 Acetylation Linked to Glutamatergic Gene Dysregulation in Human Heroin Abusers Holds Promise as Therapeutic Target.	Biological psychiatry	Egervari, Gabor; Landry, Joseph; Callens, James; Fullard, John F; Roussos, Panos; Keller, Eva; Hurd, Yasmin L	April 1, 2017	Not Determined
27814521	Create Study	The Central Nervous System and the Gut Microbiome.	Cell	Sharon, Gil; Sampson, Timothy R; Geschwind, Daniel H; Mazmanian, Sarkis K	November 3, 2016	Not Determined
27760116	Create Study	Chromosome conformation elucidates regulatory relationships in developing human brain.	Nature	Won, Hyejung; de la Torre-Ubieta, Luis; Stein, Jason L; Parikshak, Neelroop N; Huang, Jerry; Opland, Carli K; Gandal, Michael J; Sutton, Gavin J; Hormozdiari, Farhad; Lu, Daning; Lee, Changhoon; Eskin, Eleazar; Voineagu, Irina; Ernst, Jason; Geschwind, Daniel H	October 27, 2016	Not Determined
27732689	Create Study	Activity-Dependent Changes in Gene Expression in Schizophrenia Human-Induced Pluripotent Stem Cell Neurons.	JAMA psychiatry	Roussos, Panos; Guennewig, Boris; Kaczorowski, Dominik C; Barry, Guy; Brennand, Kristen J	November 1, 2016	Not Determined
27694310	Create Study	Flexible expressed region analysis for RNA-seq with derfinder.	Nucleic acids research	Collado-Torres, Leonardo; Nellore, Abhinav; Frazee, Alyssa C; Wilks, Christopher; Love, Michael I; Langmead, Ben; Irizarry, Rafael A; Leek, Jeffrey T; Jaffe, Andrew E	January 25, 2017	Not Determined
27668656	Create Study	TSHZ3 deletion causes an autism syndrome and defects in cortical projection neurons.	Nature genetics	Caubit, Xavier; Gubellini, Paolo; Andrieux, Joris; Roubertoux, Pierre L; Metwaly, Mehdi; Jacq, Bernard; Fatmi, Ahmed; Had-Aissouni, Laurence; Kwan, Kenneth Y; Salin, Pascal; Carlier, Michèle; Liedén, Agne; Rudd, Eva; Shinawi, Marwan; Vincent-Delorme, Catherine; Cuisset, Jean-Marie; Lemaitre, Marie-Pierre; Abderrehamane, Fatimetou; Duban, Bénédicte; Lemaitre, Jean-François; Woolf, Adrian S; Bockenhauer, Detlef; Severac, Dany; Dubois, Emeric; Zhu, Ying; Sestan, Nenad; Garratt, Alistair N; Lydia Kerkerian-Le, Goff; Fasano, Laurent	November 1, 2016	Not Determined
27668389	Create Study	Gene expression elucidates functional impact of polygenic risk for schizophrenia.	Nature neuroscience	Fromer, Menachem; Roussos, Panos; Sieberts, Solveig K; Johnson, Jessica S; Kavanagh, David H; Perumal, Thanneer M; Ruderfer, Douglas M; Oh, Edwin C; Topol, Aaron; Shah, Hardik R; Klei, Lambertus L; Kramer, Robin; Pinto, Dalila; Gümüş, Zeynep H; Cicek, A Ercument; Dang, Kristen K; Browne, Andrew; Lu, Cong; Xie, Lu; Readhead, Ben; Stahl, Eli A; Xiao, Jianqiu; Parvizi, Mahsa; Hamamsy, Tymor; Fullard, John F; Wang, Ying-Chih; Mahajan, Milind C; Derry, Jonathan M J; Dudley, Joel T; Hemby, Scott E; Logsdon, Benjamin A; Talbot, Konrad; Raj, Towfique; Bennett, David A; De Jager, Philip L; Zhu, Jun; Zhang, Bin; Sullivan, Patrick F; Chess, Andrew; Purcell, Shaun M; Shinobu, Leslie A; Mangravite, Lara M; Toyoshiba, Hiroyoshi; Gur, Raquel E; Hahn, Chang-Gyu; Lewis, David A; Haroutunian, Vahram; Peters, Mette A; Lipska, Barbara K; Buxbaum, Joseph D; Schadt, Eric E; Hirai, Keisuke; Roeder, Kathryn; Brennand, Kristen J; Katsanis, Nicholas; Domenici, Enrico; Devlin, Bernie; Sklar, Pamela	November 1, 2016	Not Determined
27568284	Create Study	Zika Virus Disrupts Phospho-TBK1 Localization and Mitosis in Human Neuroepithelial Stem Cells and Radial Glia.	Cell reports	Onorati, Marco; Li, Zhen; Liu, Fuchen; Sousa, André M M; Nakagawa, Naoki; Li, Mingfeng; Dell'Anno, Maria Teresa; Gulden, Forrest O; Pochareddy, Sirisha; Tebbenkamp, Andrew T N; Han, Wenqi; Pletikos, Mihovil; Gao, Tianliuyun; Zhu, Ying; Bichsel, Candace; Varela, Luis; Szigeti-Buck, Klara; Lisgo, Steven; Zhang, Yalan; Testen, Anze; Gao, Xiao-Bing; Mlakar, Jernej; Popovic, Mara; Flamand, Marie; Strittmatter, Stephen M; Kaczmarek, Leonard K; Anton, E S; Horvath, Tamas L; Lindenbach, Brett D; Sestan, Nenad	September 6, 2016	Not Determined
27113501	Create Study	Practical Guidelines for High-Resolution Epigenomic Profiling of Nucleosomal Histones in Postmortem Human Brain Tissue.	Biological psychiatry	Kundakovic, Marija; Jiang, Yan; Kavanagh, David H; Dincer, Aslihan; Brown, Leanne; Pothula, Venu; Zharovsky, Elizabeth; Park, Royce; Jacobov, Rivka; Magro, Isabelle; Kassim, Bibi; Wiseman, Jennifer; Dang, Kristen; Sieberts, Solveig K; Roussos, Panos; Fromer, Menachem; Harris, Brent; Lipska, Barbara K; Peters, Mette A; Sklar, Pamela; Akbarian, Schahram	January 15, 2017	Not Determined
27073125	Create Study	RNA-seq analysis of developing olfactory bulb projection neurons.	Molecular and cellular neurosciences	Kawasawa, Yuka Imamura; Salzberg, Anna C; Li, Mingfeng; Šestan, Nenad; Greer, Charles A; Imamura, Fumiaki	July 1, 2016	Not Determined
26926866	Create Study	A Markov random field-based approach for joint estimation of differentially expressed genes in mouse transcriptome data.	Statistical applications in genetics and molecular biology	Lin, Zhixiang; Li, Mingfeng; Sestan, Nenad; Zhao, Hongyu	April 1, 2016	Not Determined
26924435	Create Study	Down Syndrome Developmental Brain Transcriptome Reveals Defective Oligodendrocyte Differentiation and Myelination.	Neuron	Olmos-Serrano, Jose Luis; Kang, Hyo Jung; Tyler, William A; Silbereis, John C; Cheng, Feng; Zhu, Ying; Pletikos, Mihovil; Jankovic-Rapan, Lucija; Cramer, Nathan P; Galdzicki, Zygmunt; Goodliffe, Joseph; Peters, Alan; Sethares, Claire; Delalle, Ivana; Golden, Jeffrey A; Haydar, Tarik F; Sestan, Nenad	March 16, 2016	Not Determined
26827128	Create Study	Understanding the genetic liability to schizophrenia through the neuroepigenome.	Schizophrenia research	Fullard, John F; Halene, Tobias B; Giambartolomei, Claudia; Haroutunian, Vahram; Akbarian, Schahram; Roussos, Panos	November 1, 2016	Not Determined
26796689	Create Study	The Cellular and Molecular Landscapes of the Developing Human Central Nervous System.	Neuron	Silbereis, John C; Pochareddy, Sirisha; Zhu, Ying; Li, Mingfeng; Sestan, Nenad	January 20, 2016	Not Determined
26776227	Create Study	NeuN+ neuronal nuclei in non-human primate prefrontal cortex and subcortical white matter after clozapine exposure.	Schizophrenia research	Halene, Tobias B; Kozlenkov, Alexey; Jiang, Yan; Mitchell, Amanda C; Javidfar, Behnam; Dincer, Aslihan; Park, Royce; Wiseman, Jennifer; Croxson, Paula L; Giannaris, Eustathia Lela; Hof, Patrick R; Roussos, Panos; Dracheva, Stella; Hemby, Scott E; Akbarian, Schahram	February 1, 2016	Not Determined
26685806	Create Study	Postmortem human brain genomics in neuropsychiatric disorders--how far can we go?	Current opinion in neurobiology	Jaffe, Andrew E	February 1, 2016	Not Determined
26637798	Create Study	Targeted DNA Sequencing from Autism Spectrum Disorder Brains Implicates Multiple Genetic Mechanisms.	Neuron	D'Gama, Alissa M; Pochareddy, Sirisha; Li, Mingfeng; Jamuar, Saumya S; Reiff, Rachel E; Lam, Anh-Thu N; Sestan, Nenad; Walsh, Christopher A	December 2, 2015	Not Determined
26619358	Create Study	Mapping DNA methylation across development, genotype and schizophrenia in the human frontal cortex.	Nature neuroscience	Jaffe, Andrew E; Gao, Yuan; Deep-Soboslay, Amy; Tao, Ran; Hyde, Thomas M; Weinberger, Daniel R; Kleinman, Joel E	January 1, 2016	Not Determined
26612861	Create Study	Substantial DNA methylation differences between two major neuronal subtypes in human brain.	Nucleic acids research	Kozlenkov, Alexey; Wang, Minghui; Roussos, Panos; Rudchenko, Sergei; Barbu, Mihaela; Bibikova, Marina; Klotzle, Brandy; Dwork, Andrew J; Zhang, Bin; Hurd, Yasmin L; Koonin, Eugene V; Wegner, Michael; Dracheva, Stella	April 7, 2016	Not Determined
26610635	Create Study	Creating Patient-Specific Neural Cells for the In Vitro Study of Brain Disorders.	Stem cell reports	Brennand, Kristen J; Marchetto, M Carol; Benvenisty, Nissim; Brüstle, Oliver; Ebert, Allison; Izpisua Belmonte, Juan Carlos; Kaykas, Ajamete; Lancaster, Madeline A; Livesey, Frederick J; McConnell, Michael J; McKay, Ronald D; Morrow, Eric M; Muotri, Alysson R; Panchision, David M; Rubin, Lee L; Sawa, Akira; Soldner, Frank; Song, Hongjun; Studer, Lorenz; Temple, Sally; Vaccarino, Flora M; Wu, Jun; Vanderhaeghen, Pierre; Gage, Fred H; Jaenisch, Rudolf	December 8, 2015	Not Determined
26605881	Create Study	The PsychENCODE project.	Nature neuroscience	PsychENCODE Consortium; Akbarian, Schahram; Liu, Chunyu; Knowles, James A; Vaccarino, Flora M; Farnham, Peggy J; Crawford, Gregory E; Jaffe, Andrew E; Pinto, Dalila; Dracheva, Stella; Geschwind, Daniel H; Mill, Jonathan; Nairn, Angus C; Abyzov, Alexej; Pochareddy, Sirisha; Prabhakar, Shyam; Weissman, Sherman; Sullivan, Patrick F; State, Matthew W; Weng, Zhiping; Peters, Mette A; White, Kevin P; Gerstein, Mark B; Amiri, Anahita; Armoskus, Chris; Ashley-Koch, Allison E; Bae, Taejeong; Beckel-Mitchener, Andrea; Berman, Benjamin P; Coetzee, Gerhard A; Coppola, Gianfilippo; Francoeur, Nancy; Fromer, Menachem; Gao, Robert; Grennan, Kay; Herstein, Jennifer; Kavanagh, David H; Ivanov, Nikolay A; Jiang, Yan; Kitchen, Robert R; Kozlenkov, Alexey; Kundakovic, Marija; Li, Mingfeng; Li, Zhen; Liu, Shuang; Mangravite, Lara M; Mattei, Eugenio; Markenscoff-Papadimitriou, Eirene; Navarro, Fábio C P; North, Nicole; Omberg, Larsson; Panchision, David; Parikshak, Neelroop; Poschmann, Jeremie; Price, Amanda J; Purcaro, Michael; Reddy, Timothy E; Roussos, Panos; Schreiner, Shannon; Scuderi, Soraya; Sebra, Robert; Shibata, Mikihito; Shieh, Annie W; Skarica, Mario; Sun, Wenjie; Swarup, Vivek; Thomas, Amber; Tsuji, Junko; van Bakel, Harm; Wang, Daifeng; Wang, Yongjun; Wang, Kai; Werling, Donna M; Willsey, A Jeremy; Witt, Heather; Won, Hyejung; Wong, Chloe C Y; Wray, Gregory A; Wu, Emily Y; Xu, Xuming; Yao, Lijing; Senthil, Geetha; Lehner, Thomas; Sklar, Pamela; Sestan, Nenad	December 1, 2015	Not Determined
26575220	Create Study	Deciphering H3K4me3 broad domains associated with gene-regulatory networks and conserved epigenomic landscapes in the human brain.	Translational psychiatry	Dincer, A; Gavin, D P; Xu, K; Zhang, B; Dudley, J T; Schadt, E E; Akbarian, S	November 17, 2015	Not Determined
26481319	Create Study	Psychiatric genetics in China: achievements and challenges.	Molecular psychiatry	Liu, Chunyu; Saffen, David; Schulze, Thomas G; Burmeister, Margit; Sham, Pak Chung; Yao, Yong-Gang; Kuo, Po-Hsiu; Chen, Chao; An, Yu; Dai, Jiapei; Yue, Weihua; Li, Miao Xin; Xue, Hong; Su, Bing; Chen, Li; Shi, Yongyong; Qiao, Mingqi; Liu, Tiebang; Xia, Kun; Chan, Raymond C K	January 1, 2016	Not Determined
26446758	Create Study	Demystifying the secret mission of enhancers: linking distal regulatory elements to target genes.	Critical reviews in biochemistry and molecular biology	Yao, Lijing; Berman, Benjamin P; Farnham, Peggy J	January 1, 2015	Not Determined
26338991	Create Study	Impact of a cis-associated gene expression SNP on chromosome 20q11.22 on bipolar disorder susceptibility, hippocampal structure and cognitive performance.	The British journal of psychiatry : the journal of mental science	Li, Ming; Luo, Xiong-jian; Landén, Mikael; Bergen, Sarah E; Hultman, Christina M; Li, Xiao; Zhang, Wen; Yao, Yong-Gang; Zhang, Chen; Liu, Jiewei; Mattheisen, Manuel; Cichon, Sven; Mühleisen, Thomas W; Degenhardt, Franziska A; Nöthen, Markus M; Schulze, Thomas G; Grigoroiu-Serbanescu, Maria; Li, Hao; Fuller, Chris K; Chen, Chunhui; Dong, Qi; Chen, Chuansheng; Jamain, Stéphane; Leboyer, Marion; Bellivier, Frank; Etain, Bruno; Kahn, Jean-Pierre; Henry, Chantal; Preisig, Martin; Kutalik, Zoltán; Castelao, Enrique; Wright, Adam; Mitchell, Philip B; Fullerton, Janice M; Schofield, Peter R; Montgomery, Grant W; Medland, Sarah E; Gordon, Scott D; Martin, Nicholas G; MooDS Consortium; Swedish Bipolar Study Group; Rietschel, Marcella; Liu, Chunyu; Kleinman, Joel E; Hyde, Thomas M; Weinberger, Daniel R; Su, Bing	February 1, 2016	Not Determined
25884877	Create Study	Loregic: a method to characterize the cooperative logic of regulatory factors.	PLoS computational biology	Wang, Daifeng; Yan, Koon-Kiu; Sisu, Cristina; Cheng, Chao; Rozowsky, Joel; Meyerson, William; Gerstein, Mark B	April 1, 2015	Not Determined
25849321	Create Study	Genes with de novo mutations are shared by four neuropsychiatric disorders discovered from NPdenovo database.	Molecular psychiatry	Li, Jinchen; Cai, Tao; Jiang, Yi; Chen, Huiqian; He, Xin; Chen, Chao; Li, Xianfeng; Shao, Qianzhi; Ran, Xia; Li, Zhongshan; Xia, Kun; Liu, Chunyu; Sun, Zhong Sheng; Wu, Jinyu	February 1, 2016	Not Determined
25810521	Create Study	Spatially heterogeneous choroid plexus transcriptomes encode positional identity and contribute to regional CSF production.	The Journal of neuroscience : the official journal of the Society for Neuroscience	Lun, Melody P; Johnson, Matthew B; Broadbelt, Kevin G; Watanabe, Momoko; Kang, Young-Jin; Chau, Kevin F; Springel, Mark W; Malesz, Alexandra; Sousa, André M M; Pletikos, Mihovil; Adelita, Tais; Calicchio, Monica L; Zhang, Yong; Holtzman, Michael J; Lidov, Hart G W; Sestan, Nenad; Steen, Hanno; Monuki, Edwin S; Lehtinen, Maria K	March 25, 2015	Not Determined
25745370	Create Study	The use of stem cells to study autism spectrum disorder.	The Yale journal of biology and medicine	Ardhanareeswaran, Karthikeyan; Coppola, Gianfilippo; Vaccarino, Flora	March 1, 2015	Not Determined
25652815	Create Study	Genetics and epigenetics of circadian rhythms and their potential roles in neuropsychiatric disorders.	Neuroscience bulletin	Liu, Chunyu; Chung, Michael	February 1, 2015	Not Determined
25624274	Create Study	From trans to cis: transcriptional regulatory networks in neocortical development.	Trends in genetics : TIG	Shibata, Mikihito; Gulden, Forrest O; Sestan, Nenad	February 1, 2015	Not Determined
25501035	Create Study	Developmental regulation of human cortex transcription and its clinical relevance at single base resolution.	Nature neuroscience	Jaffe, Andrew E; Shin, Jooheon; Collado-Torres, Leonardo; Leek, Jeffrey T; Tao, Ran; Li, Chao; Gao, Yuan; Jia, Yankai; Maher, Brady J; Hyde, Thomas M; Kleinman, Joel E; Weinberger, Daniel R	January 1, 2015	Not Determined
25464374	Create Study	Autism spectrum disorders: from genes to neurobiology.	Current opinion in neurobiology	Willsey, A Jeremy; State, Matthew W	February 1, 2015	Not Determined
25453756	Create Study	A role for noncoding variation in schizophrenia.	Cell reports	Roussos, Panos; Mitchell, Amanda C; Voloudakis, Georgios; Fullard, John F; Pothula, Venu M; Tsang, Jonathan; Stahl, Eli A; Georgakopoulos, Anastasios; Ruderfer, Douglas M; Charney, Alexander; Okada, Yukinori; Siminovitch, Katherine A; Worthington, Jane; Padyukov, Leonid; Klareskog, Lars; Gregersen, Peter K; Plenge, Robert M; Raychaudhuri, Soumya; Fromer, Menachem; Purcell, Shaun M; Brennand, Kristen J; Robakis, Nikolaos K; Schadt, Eric E; Akbarian, Schahram; Sklar, Pamela	November 20, 2014	Not Determined
25243493	Create Study	Correlation between DNA methylation and gene expression in the brains of patients with bipolar disorder and schizophrenia.	Bipolar disorders	Chen, Chao; Zhang, Chunling; Cheng, Lijun; Reilly, James L; Bishop, Jeffrey R; Sweeney, John A; Chen, Hua-Yun; Gershon, Elliot S; Liu, Chunyu	December 1, 2014	Not Determined

helpcenter.collection.publications-tab

Collection - Publications

The number of Publications is displayed in parentheses next to the tab name. Clicking on any of the Publication Titles will open the Publication in a new internet browsing tab.

Collection Owners, Program Officers, and users with Submission or Administrative Privileges for the Collection may mark a publication as either Relevant or Not Relevant in the Status column.

Frequently Asked Questions

How can I determine if a publication is relevant?

Publications are considered relevant to a collection when the data shared is directly related to the project or collection.
Where does the NDA get the publications?

PubMed, an online library containing journals, articles, and medical research. Sponsored by NiH and National Library of Medicine (NLM).

Glossary

Create Study

A link to the Create an NDA Study page that can be clicked to start creating an NDA Study with information such as the title, journal and authors automatically populated.
Not Determined Publication

Indicates that the publication has not yet been reviewed and/or marked as Relevant or Not Relevant so it has not been determined whether an NDA Study is expected.
Not Relevant Publication

A publication that is not based on data related to the aims of the grant/project associated with the Collection or not based on any data such as a review article and, therefore, an NDA Study is not expected to be created.
PubMed

PubMed provides citation information for biomedical and life sciences publications and is managed by the U.S. National Institutes of Health's National Library of Medicine.
PubMed ID

The PUBMed ID is the unique ID number for the publication as recorded in the PubMed database.
Relevant Publication

A publication that is based on data related to the aims of the grant/project associated with the Collection and, therefore, an NDA Study is expected to be created.

Contact NDA Help Desk

Data Expected List: Mandatory Data Structures

These data structures are mandatory for your NDA Collection. Please update the Targeted Enrollment number to accurately represent the number of subjects you expect to submit for the entire study.

For NIMH HIV-related research that involves human research participants: Select the dictionary or dictionaries most appropriate for your research. If your research does not require all three data dictionaries, just ignore the ones you do not need. There is no need to delete extra data dictionaries from your NDA Collection. You can adjust the Targeted Enrollment column in the Data Expected tab to “0” for those unnecessary data dictionaries. At least one of the three data dictionaries must have a non-zero value.

Data Expected	Targeted Enrollment	Initial Submission	Subjects Submitted	Initial Share	Subjects Shared	Status
Research Subject and Pedigree	1	01/15/2019	0	05/15/2019	0	Approved

To create your project's Data Expected list, use the "+New Data Expected" to add or request existing structures and to request new Data Structures that are not in the NDA Data Dictionary.

If the Structure you need already exists, locate it and specify your dates and enrollment when adding it to your Data Expected list. If you require changes to the Structure you need, select the indicator stating "No, it requires changes to meet research needs," and upload a file containing your requested changes.

If the structure you need is not yet defined in the Data Dictionary, you can select "Upload Definition" and attach the necessary materials to request its creation.

When selecting the expected dates for your data, make sure to follow the standard Data Sharing Regimen and choose dates within the date ranges that correspond to your project start and end dates.

Please visit the Completing Your Data Expected Tutorial for more information.

Data Expected List: Data Structures per Research Aims

These data structures are specific to your research aims and should list all data structures in which data will be collected and submitted for this NDA Collection. Please update the Targeted Enrollment number to accurately represent the number of subjects you expect to submit for the entire study.

Data Expected	Targeted Enrollment	Initial Submission	Subjects Submitted	Initial Share	Status
Genomics/omics	3,200	03/14/2024	0	07/14/2024	Approved
Summary	3,200	03/18/2024	185	07/18/2024	Approved
Hi-C	3,200	03/14/2024	26	07/14/2024	Approved
Bisulfite Sequencing	3,200	03/14/2024	253	07/14/2024	Approved
ChIP Sequencing	3,200	03/14/2024	782	07/14/2024	Approved
SNP Array	3,200	03/14/2024	2,306	07/14/2024	Approved
RNA Sequencing	3,200	03/14/2024	2,261	07/14/2024	Approved
Whole Genome Sequencing	3,200	03/14/2024	441	07/14/2024	Approved
ATAC Sequencing	3,200	03/08/2024	584	07/08/2024	Approved
Proteomics samples	3,200	03/14/2024	325	07/14/2024	Approved
PsychENCODE/Common Mind Summary	3,200	03/18/2024	3,331	07/18/2024	Approved
Nucleosome Occupancy and Methylome Sequencing	3,200	03/14/2024	5	07/14/2024	Approved
PsychENCODE NOMe Sequencing	100	03/13/2024	0	07/13/2024	Requested New

Structure not yet defined

No Status history for this Data Expected has been recorded yet

helpcenter.collection.data-expected-tab

Collection - Data Expected

The Data Expected tab displays the list of all data that NDA expects to receive in association with the Collection as defined by the contributing researcher, as well as the dates for the expected initial upload of the data, and when it is first expected to be shared, or with the research community. Above the primary table of Data Expected, any publications determined to be relevant to the data within the Collection are also displayed - members of the contributing research group can use these to define NDA Studies, connecting those papers to underlying data in NDA.

The tab is used both as a reference for those accessing shared data, providing information on what is expected and when it will be shared, and as the primary tracking mechanism for contributing projects. It is used by both contributing primary researchers, secondary researchers, and NIH Program and Grants Management staff.

Researchers who are starting their project need to update their Data Expected list to include all the Data Structures they are collecting under their grant and set their initial submission and sharing schedule according to the NDA Data Sharing Regimen.

To add existing Data Structures from the Data Dictionary, to request new Data Structure that are not in the Dictionary, or to request changes to existing Data Structures, click "+New Data Expected".

For step-by-step instructions on how to add existing Data Structures, request changes to an existing Structure, or request a new Data Structure, please visit the Completing Your Data Expected Tutorial.

If you are a contributing researcher creating this list for the first time, or making changes to the list as your project progress, please note the following:

Although items you add to the list and changes you make are displayed, they are not committed to the system until you Save the entire page using the "Save" button at the bottom of your screen. Please Save after every change to ensure none of your work is lost.
If you attempt to add a new structure, the title you provide must be unique - if another structure exists with the same name your change will fail.
Adding a new structure to this list is the only way to request the creation of a new Data Dictionary definition.

Frequently Asked Questions

What is an NDA Data Structure?

An NDA Data Structure is comprised of multiple Data Elements to make up an electronic definition of an assessment, measure, questionnaire, etc will have a corresponding Data Structure.
What is the NDA Data Dictionary?

The NDA Data Dictionary is comprised of electronic definitions known as Data Structures.

Glossary

Analyzed Data

Data specific to the primary aims of the research being conducted (e.g. outcome measures, other dependent variables, observations, laboratory results, analyzed images, volumetric data, etc.) including processed images.
Data Item

Items listed on the Data Expected list in the Collection which may be an individual and discrete Data Structure, Data Structure Category, or Data Structure Group.
Data Structure

A defined organization and group of Data Elements to represent an electronic definition of a measure, assessment, questionnaire, or collection of data points. Data structures that have been defined in the NDA Data Dictionary are available at https://nda.nih.gov/general-query.html?q=query=data-structure
Data Structure Category

An NDA term describing the affiliation of a Data Structure to a Category, which may be disease/disorder or diagnosis related (Depression, ADHD, Psychosis), specific to data type (MRI, eye tracking, omics), or type of data (physical exam, IQ).
Data Structure Group

A Data Item listed on the Data Expected tab of a Collection that indicates a group of Data Structures (e.g., ADOS or SCID) for which data may be submitted instead of a specific Data Structure identified by version, module, edition, etc. For example, the ADOS Data Structure Category includes every ADOS Data Structure such as ADOS Module 1, ADOS Module 2, ADOS Module 1 - 2nd Edition, etc. The SCID Data Structure Group includes every SCID Data Structure such as SCID Mania, SCID V Mania, SCID PTSD, SCID-V Diagnosis, and more.
Evaluated Data

A new Data Structure category, Evaluated Data is analyzed data resulting from the use of computational pipelines in the Cloud and can be uploaded directly back to a miNDAR database. Evaluated Data is expected to be listed as a Data Item in the Collection's Data Expected Tab.
Imaging Data

Imaging+ is an NDA term which encompasses all imaging related data including, but not limited to, images (DTI, MRI, PET, Structural, Spectroscopy, etc.) as well as neurosignal data (EEG, fMRI, MEG, EGG, eye tracking, etc.) and Evaluated Data.
Initial Share Date

Initial Submission and Initial Share dates should be populated according to the NDA Data Sharing Terms and Conditions. Any modifications to these will go through the approval processes outlined above. Data will be shared with authorized users upon publication (via an NDA Study) or 1-2 years after the grant end date specified on the first Notice of Award, as defined in the applicable Data Sharing Terms and Conditions.
Initial Submission Date

Initial Submission and Initial Share dates should be populated according to these NDA Data Sharing Terms and Conditions. Any modifications to these will go through the approval processes outlined above. Data for all subjects is not expected on the Initial Submission Date and modifications may be made as necessary based on the project's conduct.
Research Subject and Pedigree

An NDA created Data Structure used to convey basic information about the subject such as demographics, pedigree (links family GUIDs), diagnosis/phenotype, and sample location that are critical to allow for easier querying of shared data.
Submission Cycle

The NDA has two Submission Cycles per year - January 15 and July 15.
Submission Exemption

An interface to notify NDA that data may not be submitted during the upcoming/current submission cycle.

Contact NDA Help Desk

Collection Owners and those with Collection Administrator permission, may edit a collection. The following is currently available for Edit on this page:

Associated Studies

Studies that have been defined using data from a Collection are important criteria to determine the value of data shared. The number of subjects column displays the counts from this Collection that are included in a Study, out of the total number of subjects in that study. The Data Use column represents whether or not the study is a primary analysis of the data or a secondary analysis. State indicates whether the study is private or shared with the research community.

Study NameFilter by Study Name	AbstractFilter by Abstract	Collection/Study SubjectsFilter by Collection/Study Subjects	Data UsageFilter by Data Usage	StateFilter by State
Cross-ancestry, cell-type-informed atlas of gene, isoform, and splicing regulation in the developing human brain.	Genomic regulatory elements active in the developing human brain are notably enriched in genetic risk for neuropsychiatric disorders, including autism spectrum disorder (ASD), schizophrenia, and bipolar disorder. However, prioritizing the specific risk genes and candidate molecular mechanisms underlying these genetic enrichments has been hindered by the lack of a single unified large-scale gene regulatory atlas of human brain development. Here, we uniformly process and systematically characterize gene, isoform, and splicing quantitative trait loci (xQTLs) in 672 fetal brain samples from unique subjects across multiple ancestral populations. We identify 15,752 genes harboring a significant xQTL and map 3,739 eQTLs to a specific cellular context. We observe a striking drop in gene expression and splicing heritability as the human brain develops. Isoform-level regulation, particularly in the second trimester, mediates the greatest proportion of heritability across multiple psychiatric GWAS, compared with eQTLs. Via colocalization and TWAS, we prioritize biological mechanisms for ~60% of GWAS loci across five neuropsychiatric disorders, nearly two-fold that observed in the adult brain. Finally, we build a comprehensive set of developmentally regulated gene and isoform co-expression networks capturing unique genetic enrichments across disorders. Together, this work provides a comprehensive view of genetic regulation across human brain development as well as the stage-and cell type-informed mechanistic underpinnings of neuropsychiatric disorders.	158/158	Primary Analysis	Shared

* Data not on individual level

helpcenter.collection.associated-studies-tab

Collection - Associated Studies

Clicking on the Study Title will open the study details in a new internet browser tab. The Abstract is available for viewing, providing the background explanation of the study, as provided by the Collection Owner.

Primary v. Secondary Analysis: The Data Usage column will have one of these two choices. An associated study that is listed as being used for Primary Analysis indicates at least some and potentially all of the data used was originally collected by the creator of the NDA Study. Secondary Analysis indicates the Study owner was not involved in the collection of data, and may be used as supporting data.

Private v. Shared State: Studies that remain private indicate the associated study is only available to users who are able to access the collection. A shared study is accessible to the general public.

Frequently Asked Questions

How do I associate a study to my collection?

Studies are associated to the Collection automatically when the data is defined in the Study.

Glossary

Associated Studies Tab

A tab in a Collection that lists the NDA Studies that have been created using data from that Collection including both Primary and Secondary Analysis NDA Studies.

Contact NDA Help Desk

Edit

Choose File:	Select File
File Type:
Description:

Exemption Type*
From Date*
To Date*
Reason*	Characters Remaining:

Disclaimer

Filter Cart

Frequently Asked Questions

Glossary