39312666 | Create Study | Nr2f1 enhancers have distinct functions in controlling Nr2f1 expression during cortical development. | Proceedings of the National Academy of Sciences of the United States of America | Liu, Zhidong; Ypsilanti, Athéna R; Markenscoff-Papadimitriou, Eirene; Dickel, Diane E; Sanders, Stephan J; Dong, Shan; Pennacchio, Len A; Visel, Axel; Rubenstein, John L | October 1, 2024 | Not Determined |
39294132 | Create Study | Multiplex, single-cell CRISPRa screening for cell type specific regulatory elements. | Nature communications | Chardon, Florence M; McDiarmid, Troy A; Page, Nicholas F; Daza, Riza M; Martin, Beth K; Domcke, Silvia; Regalado, Samuel G; Lalanne, Jean-Benoît; Calderon, Diego; Li, Xiaoyi; Starita, Lea M; Sanders, Stephan J; Ahituv, Nadav; Shendure, Jay | September 18, 2024 | Not Determined |
39141354 | Create Study | Genetic mechanisms for impaired synaptic plasticity in schizophrenia revealed by computational modeling. | Proceedings of the National Academy of Sciences of the United States of America | Mäki-Marttunen, Tuomo; Blackwell, Kim T; Akkouh, Ibrahim; Shadrin, Alexey; Valstad, Mathias; Elvsåshagen, Torbjørn; Linne, Marja-Leena; Djurovic, Srdjan; Einevoll, Gaute T; Andreassen, Ole A | August 20, 2024 | Not Determined |
39131273 | Create Study | Ciliary biology intersects autism and congenital heart disease. | bioRxiv : the preprint server for biology | Teerikorpi, Nia; Lasser, Micaela C; Wang, Sheng; Kostyanovskaya, Elina; Bader, Ethel; Sun, Nawei; Dea, Jeanselle; Nowakowski, Tomasz J; Willsey, A Jeremy; Willsey, Helen Rankin | July 31, 2024 | Not Determined |
39130195 | Create Study | Integrating spatially-resolved transcriptomics data across tissues and individuals: challenges and opportunities. | ArXiv | Guo, Boyi; Ling, Wodan; Kwon, Sang Ho; Panwar, Pratibha; Ghazanfar, Shila; Martinowich, Keri; Hicks, Stephanie C | August 1, 2024 | Not Determined |
39072012 | Create Study | Epigenome-wide association studies identify novel DNA methylation sites associated with PTSD: A meta-analysis of 23 military and civilian cohorts. | medRxiv : the preprint server for health sciences | Katrinli, Seyma; Wani, Agaz H; Maihofer, Adam X; Ratanatharathorn, Andrew; Daskalakis, Nikolaos P; Montalvo-Ortiz, Janitza; Núñez-Ríos, Diana L; Zannas, Anthony S; Zhao, Xiang; Aiello, Allison E; Ashley-Koch, Allison E; Avetyan, Diana; Baker, Dewleen G; Beckham, Jean C; Boks, Marco P; Brick, Leslie A; Bromet, Evelyn; Champagne, Frances A; Chen, Chia-Yen; Dalvie, Shareefa; Dennis, Michelle F; Fatumo, Segun; Fortier, Catherine; Galea, Sandro; Garrett, Melanie E; Geuze, Elbert; Grant, Gerald; Michael A Hauser; Hayes, Jasmeet P; Hemmings, Sian Mj; Huber, Bertrand Russel; Jajoo, Aarti; Jansen, Stefan; Kessler, Ronald C; Kimbrel, Nathan A; King, Anthony P; Kleinman, Joel E; Koen, Nastassja; Koenen, Karestan C; Kuan, Pei-Fen; Liberzon, Israel; Linnstaedt, Sarah D; Lori, Adriana; Luft, Benjamin J; Luykx, Jurjen J; Marx, Christine E; McLean, Samuel A; Mehta, Divya; Milberg, William; Miller, Mark W; Mufford, Mary S; Musanabaganwa, Clarisse; Mutabaruka, Jean; Mutesa, Leon; Nemeroff, Charles B; Nugent, Nicole R; Orcutt, Holly K; Qin, Xue-Jun; Rauch, Sheila A M; Ressler, Kerry J; Risbrough, Victoria B; Rutembesa, Eugène; Rutten, Bart P F; Seedat, Soraya; Stein, Dan J; Stein, Murray B; Toikumo, Sylvanus; Ursano, Robert J; Uwineza, Annette; Verfaellie, Mieke H; Vermetten, Eric; Vinkers, Christiaan H; Ware, Erin B; Wildman, Derek E; Wolf, Erika J; Young, Ross McD; Zhao, Ying; van den Heuvel, Leigh L; PGC-PTSD Epigenetics Workgroup, PsychENCODE PTSD Brainomics Project, Traumatic Stress Brain Research Group; Uddin, Monica; Nievergelt, Caroline M; Smith, Alicia K; Logue, Mark W | July 15, 2024 | Not Determined |
39039045 | Create Study | Protective alleles and precision healthcare in crewed spaceflight. | Nature communications | Rutter, Lindsay A; MacKay, Matthew J; Cope, Henry; Szewczyk, Nathaniel J; Kim, JangKeun; Overbey, Eliah; Tierney, Braden T; Muratani, Masafumi; Lamm, Ben; Bezdan, Daniela; Paul, Amber M; Schmidt, Michael A; Church, George M; Giacomello, Stefania; Mason, Christopher E | July 22, 2024 | Not Determined |
39026810 | Create Study | Dynamic stress- and inflammatory-based regulation of psychiatric risk loci in human neurons. | bioRxiv : the preprint server for biology | Retallick-Townsley, Kayla G; Lee, Seoyeon; Cartwright, Sam; Cohen, Sophie; Sen, Annabel; Jia, Meng; Young, Hannah; Dobbyn, Lee; Deans, Michael; Fernandez-Garcia, Meilin; Huckins, Laura M; Brennand, Kristen J | July 9, 2024 | Not Determined |
38979211 | Create Study | Dynamic Human Gut Microbiome and Immune Shifts During an Immersive Psychosocial Therapeutic Program. | bioRxiv : the preprint server for biology | Zhou, Xin; Ganz, Ariel B; Rayner, Andre; Cheng, Tess Yan; Oba, Haley; Rolnik, Benjamin; Lancaster, Samuel; Lu, Xinrui; Li, Yizhou; Johnson, Jethro S; Hoyd, Rebecca; Spakowicz, Daniel J; Slavich, George M; Snyder, Michael P | June 27, 2024 | Not Determined |
38951512 | Create Study | Distinct genetic liability profiles define clinically relevant patient strata across common diseases. | Nature communications | Trastulla, Lucia; Dolgalev, Georgii; Moser, Sylvain; Jiménez-Barrón, Laura T; Andlauer, Till F M; von Scheidt, Moritz; Schizophrenia Working Group of the Psychiatric Genomics Consortium; Budde, Monika; Heilbronner, Urs; Papiol, Sergi; Teumer, Alexander; Homuth, Georg; Völzke, Henry; Dörr, Marcus; Falkai, Peter; Schulze, Thomas G; Gagneur, Julien; Iorio, Francesco; Müller-Myhsok, Bertram; Schunkert, Heribert; Ziller, Michael J | July 1, 2024 | Not Determined |
38925120 | Create Study | A transcriptomic atlas of the human brain reveals genetically determined aspects of neuropsychiatric health. | American journal of human genetics | Bledsoe, Xavier; Gamazon, Eric R | August 8, 2024 | Not Determined |
38915580 | Create Study | Early Developmental Origins of Cortical Disorders Modeled in Human Neural Stem Cells. | bioRxiv : the preprint server for biology | Mato-Blanco, Xoel; Kim, Suel-Kee; Jourdon, Alexandre; Ma, Shaojie; Tebbenkamp, Andrew T N; Liu, Fuchen; Duque, Alvaro; Vaccarino, Flora M; Sestan, Nenad; Colantuoni, Carlo; Rakic, Pasko; Santpere, Gabriel; Micali, Nicola | June 14, 2024 | Not Determined |
38913688 | Create Study | The Human Developing Cerebral Cortex Is Characterized by an Elevated De Novo Expression of Long Noncoding RNAs in Excitatory Neurons. | Molecular biology and evolution | Morales-Vicente, David A; Tahira, Ana C; Woellner-Santos, Daisy; Amaral, Murilo S; Berzoti-Coelho, Maria G; Verjovski-Almeida, Sergio | July 3, 2024 | Not Determined |
38895212 | Create Study | SpotSweeper: spatially-aware quality control for spatial transcriptomics. | bioRxiv : the preprint server for biology | Totty, Michael; Hicks, Stephanie C; Guo, Boyi | June 9, 2024 | Not Determined |
38862827 | Create Study | Telomeric RNA (TERRA) increases in response to spaceflight and high-altitude climbing. | Communications biology | Al-Turki, Taghreed M; Maranon, David G; Nelson, Christopher B; Lewis, Aidan M; Luxton, Jared J; Taylor, Lynn E; Altina, Noelia; Wu, Fei; Du, Huixun; Kim, JangKeun; Damle, Namita; Overbey, Eliah; Meydan, Cem; Grigorev, Kirill; Winer, Daniel A; Furman, David; Mason, Christopher E; Bailey, Susan M | June 11, 2024 | Not Determined |
38862781 | Create Study | Transcriptomics analysis reveals molecular alterations underpinning spaceflight dermatology. | Communications medicine | Cope, Henry; Elsborg, Jonas; Demharter, Samuel; McDonald, J Tyson; Wernecke, Chiara; Parthasarathy, Hari; Unadkat, Hriday; Chatrathi, Mira; Claudio, Jennifer; Reinsch, Sigrid; Avci, Pinar; Zwart, Sara R; Smith, Scott M; Heer, Martina; Muratani, Masafumi; Meydan, Cem; Overbey, Eliah; Kim, Jangkeun; Chin, Christopher R; Park, Jiwoon; Schisler, Jonathan C; Mason, Christopher E; Szewczyk, Nathaniel J; Willis, Craig R G; Salam, Amr; Beheshti, Afshin | June 11, 2024 | Not Determined |
38862620 | Create Study | Spaceflight induces changes in gene expression profiles linked to insulin and estrogen. | Communications biology | Mathyk, Begum Aydogan; Tabetah, Marshall; Karim, Rashid; Zaksas, Victoria; Kim, JangKeun; Anu, R I; Muratani, Masafumi; Tasoula, Alexia; Singh, Ruth Subhash; Chen, Yen-Kai; Overbey, Eliah; Park, Jiwoon; Cope, Henry; Fazelinia, Hossein; Povero, Davide; Borg, Joseph; Klotz, Remi V; Yu, Min; Young, Steven L; Mason, Christopher E; Szewczyk, Nathaniel; St Clair, Riley M; Karouia, Fathi; Beheshti, Afshin | June 11, 2024 | Not Determined |
38862604 | Create Study | Longitudinal multi-omics analysis of host microbiome architecture and immune responses during short-term spaceflight. | Nature microbiology | Tierney, Braden T; Kim, JangKeun; Overbey, Eliah G; Ryon, Krista A; Foox, Jonathan; Sierra, Maria A; Bhattacharya, Chandrima; Damle, Namita; Najjar, Deena; Park, Jiwoon; Garcia Medina, J Sebastian; Houerbi, Nadia; Meydan, Cem; Wain Hirschberg, Jeremy; Qiu, Jake; Kleinman, Ashley S; Al-Ghalith, Gabriel A; MacKay, Matthew; Afshin, Evan E; Dhir, Raja; Borg, Joseph; Gatt, Christine; Brereton, Nicholas; Readhead, Benjamin P; Beyaz, Semir; Venkateswaran, Kasthuri J; Wiseman, Kelly; Moreno, Juan; Boddicker, Andrew M; Zhao, Junhua; Lajoie, Bryan R; Scott, Ryan T; Altomare, Andrew; Kruglyak, Semyon; Levy, Shawn; Church, George M; Mason, Christopher E | July 1, 2024 | Not Determined |
38862573 | Create Study | Aging and putative frailty biomarkers are altered by spaceflight. | Scientific reports | Camera, Andrea; Tabetah, Marshall; Castañeda, Veronica; Kim, JangKeun; Galsinh, Aman Singh; Haro-Vinueza, Alissen; Salinas, Ivonne; Seylani, Allen; Arif, Shehbeel; Das, Saswati; Mori, Marcelo A; Carano, Anthony; de Oliveira, Lorraine Christine; Muratani, Masafumi; Barker, Richard; Zaksas, Victoria; Goel, Chirag; Dimokidis, Eleni; Taylor, Deanne M; Jeong, Jisu; Overbey, Eliah; Meydan, Cem; Porterfield, D Marshall; Díaz, Juan Esteban; Caicedo, Andrés; Schisler, Jonathan C; Laiakis, Evagelia C; Mason, Christopher E; Kim, Man S; Karouia, Fathi; Szewczyk, Nathaniel J; Beheshti, Afshin | June 11, 2024 | Not Determined |
38862542 | Create Study | Space radiation damage rescued by inhibition of key spaceflight associated miRNAs. | Nature communications | McDonald, J Tyson; Kim, JangKeun; Farmerie, Lily; Johnson, Meghan L; Trovao, Nidia S; Arif, Shehbeel; Siew, Keith; Tsoy, Sergey; Bram, Yaron; Park, Jiwoon; Overbey, Eliah; Ryon, Krista; Haltom, Jeffrey; Singh, Urminder; Enguita, Francisco J; Zaksas, Victoria; Guarnieri, Joseph W; Topper, Michael; Wallace, Douglas C; Meydan, Cem; Baylin, Stephen; Meller, Robert; Muratani, Masafumi; Porterfield, D Marshall; Kaufman, Brett; Mori, Marcelo A; Walsh, Stephen B; Sigaudo-Roussel, Dominique; Mebarek, Saida; Bottini, Massimo; Marquette, Christophe A; Wurtele, Eve Syrkin; Schwartz, Robert E; Galeano, Diego; Mason, Christopher E; Grabham, Peter; Beheshti, Afshin | June 11, 2024 | Not Determined |
38862516 | Create Study | Single-cell multi-ome and immune profiles of the Inspiration4 crew reveal conserved, cell-type, and sex-specific responses to spaceflight. | Nature communications | Kim, JangKeun; Tierney, Braden T; Overbey, Eliah G; Dantas, Ezequiel; Fuentealba, Matias; Park, Jiwoon; Narayanan, S Anand; Wu, Fei; Najjar, Deena; Chin, Christopher R; Meydan, Cem; Loy, Conor; Mathyk, Begum; Klotz, Remi; Ortiz, Veronica; Nguyen, Khiem; Ryon, Krista A; Damle, Namita; Houerbi, Nadia; Patras, Laura I; Schanzer, Nathan; Hutchinson, Gwyneth A; Foox, Jonathan; Bhattacharya, Chandrima; Mackay, Matthew; Afshin, Evan E; Hirschberg, Jeremy Wain; Kleinman, Ashley S; Schmidt, Julian C; Schmidt, Caleb M; Schmidt, Michael A; Beheshti, Afshin; Matei, Irina; Lyden, David; Mullane, Sean; Asadi, Amran; Lenz, Joan S; Mzava, Omary; Yu, Min; Ganesan, Saravanan; De Vlaminck, Iwijn; Melnick, Ari M; Barisic, Darko; Winer, Daniel A; Zwart, Sara R; Crucian, Brian E; Smith, Scott M; Mateus, Jaime; Furman, David; Mason, Christopher E | June 11, 2024 | Not Determined |
38862509 | Create Study | Collection of biospecimens from the inspiration4 mission establishes the standards for the space omics and medical atlas (SOMA). | Nature communications | Overbey, Eliah G; Ryon, Krista; Kim, JangKeun; Tierney, Braden T; Klotz, Remi; Ortiz, Veronica; Mullane, Sean; Schmidt, Julian C; MacKay, Matthew; Damle, Namita; Najjar, Deena; Matei, Irina; Patras, Laura; Garcia Medina, J Sebastian; Kleinman, Ashley S; Wain Hirschberg, Jeremy; Proszynski, Jacqueline; Narayanan, S Anand; Schmidt, Caleb M; Afshin, Evan E; Innes, Lucinda; Saldarriaga, Mateo Mejia; Schmidt, Michael A; Granstein, Richard D; Shirah, Bader; Yu, Min; Lyden, David; Mateus, Jaime; Mason, Christopher E | June 11, 2024 | Not Determined |
38862505 | Create Study | Astronaut omics and the impact of space on the human body at scale. | Nature communications | Rutter, Lindsay A; Cope, Henry; MacKay, Matthew J; Herranz, Raúl; Das, Saswati; Ponomarev, Sergey A; Costes, Sylvain V; Paul, Amber M; Barker, Richard; Taylor, Deanne M; Bezdan, Daniela; Szewczyk, Nathaniel J; Muratani, Masafumi; Mason, Christopher E; Giacomello, Stefania | June 11, 2024 | Not Determined |
38862496 | Create Study | Direct RNA sequencing of astronaut blood reveals spaceflight-associated m6A increases and hematopoietic transcriptional responses. | Nature communications | Grigorev, Kirill; Nelson, Theodore M; Overbey, Eliah G; Houerbi, Nadia; Kim, JangKeun; Najjar, Deena; Damle, Namita; Afshin, Evan E; Ryon, Krista A; Thierry-Mieg, Jean; Thierry-Mieg, Danielle; Melnick, Ari M; Mateus, Jaime; Mason, Christopher E | June 11, 2024 | Not Determined |
38862494 | Create Study | Spatial multi-omics of human skin reveals KRAS and inflammatory responses to spaceflight. | Nature communications | Park, Jiwoon; Overbey, Eliah G; Narayanan, S Anand; Kim, JangKeun; Tierney, Braden T; Damle, Namita; Najjar, Deena; Ryon, Krista A; Proszynski, Jacqueline; Kleinman, Ashley; Hirschberg, Jeremy Wain; MacKay, Matthew; Afshin, Evan E; Granstein, Richard; Gurvitch, Justin; Hudson, Briana M; Rininger, Aric; Mullane, Sean; Church, Sarah E; Meydan, Cem; Church, George; Beheshti, Afshin; Mateus, Jaime; Mason, Christopher E | June 11, 2024 | Not Determined |
38862487 | Create Study | Single-cell analysis identifies conserved features of immune dysfunction in simulated microgravity and spaceflight. | Nature communications | Wu, Fei; Du, Huixun; Overbey, Eliah; Kim, JangKeun; Makhijani, Priya; Martin, Nicolas; Lerner, Chad A; Nguyen, Khiem; Baechle, Jordan; Valentino, Taylor R; Fuentealba, Matias; Bartleson, Juliet M; Halaweh, Heather; Winer, Shawn; Meydan, Cem; Garrett-Bakelman, Francine; Sayed, Nazish; Melov, Simon; Muratani, Masafumi; Gerencser, Akos A; Kasler, Herbert G; Beheshti, Afshin; Mason, Christopher E; Furman, David; Winer, Daniel A | June 11, 2024 | Not Determined |
38862484 | Create Study | Cosmic kidney disease: an integrated pan-omic, physiological and morphological study into spaceflight-induced renal dysfunction. | Nature communications | Siew, Keith; Nestler, Kevin A; Nelson, Charlotte; D'Ambrosio, Viola; Zhong, Chutong; Li, Zhongwang; Grillo, Alessandra; Wan, Elizabeth R; Patel, Vaksha; Overbey, Eliah; Kim, JangKeun; Yun, Sanghee; Vaughan, Michael B; Cheshire, Chris; Cubitt, Laura; Broni-Tabi, Jessica; Al-Jaber, Maneera Yousef; Boyko, Valery; Meydan, Cem; Barker, Peter; Arif, Shehbeel; Afsari, Fatemeh; Allen, Noah; Al-Maadheed, Mohammed; Altinok, Selin; Bah, Nourdine; Border, Samuel; Brown, Amanda L; Burling, Keith; Cheng-Campbell, Margareth; Colón, Lorianna M; Degoricija, Lovorka; Figg, Nichola; Finch, Rebecca; Foox, Jonathan; Faridi, Pouya; French, Alison; Gebre, Samrawit; Gordon, Peter; Houerbi, Nadia; Valipour Kahrood, Hossein; Kiffer, Frederico C; Klosinska, Aleksandra S; Kubik, Angela; Lee, Han-Chung; Li, Yinghui; Lucarelli, Nicholas; Marullo, Anthony L; Matei, Irina; McCann, Colleen M; Mimar, Sayat; Naglah, Ahmed; Nicod, Jérôme; O'Shaughnessy, Kevin M; Oliveira, Lorraine Christine De; Oswalt, Leah; Patras, Laura Ioana; Lai Polo, San-Huei; Rodríguez-Lopez, María; Roufosse, Candice; Sadeghi-Alavijeh, Omid; Sanchez-Hodge, Rebekah; Paul, Anindya S; Schittenhelm, Ralf Bernd; Schweickart, Annalise; Scott, Ryan T; Choy Lim Kam Sian, Terry Chin; da Silveira, Willian A; Slawinski, Hubert; Snell, Daniel; Sosa, Julio; Saravia-Butler, Amanda M; Tabetah, Marshall; Tanuwidjaya, Erwin; Walker-Samuel, Simon; Yang, Xiaoping; Yasmin; Zhang, Haijian; Godovac-Zimmermann, Jasminka; Sarder, Pinaki; Sanders, Lauren M; Costes, Sylvain V; Campbell, Robert A A; Karouia, Fathi; Mohamed-Alis, Vidya; Rodriques, Samuel; Lynham, Steven; Steele, Joel Ricky; Baranzini, Sergio; Fazelinia, Hossein; Dai, Zhongquan; Uruno, Akira; Shiba, Dai; Yamamoto, Masayuki; A C Almeida, Eduardo; Blaber, Elizabeth; Schisler, Jonathan C; Eisch, Amelia J; Muratani, Masafumi; Zwart, Sara R; Smith, Scott M; Galazka, Jonathan M; Mason, Christopher E; Beheshti, Afshin; Walsh, Stephen B | June 11, 2024 | Not Determined |
38862473 | Create Study | Ethical considerations for the age of non-governmental space exploration. | Nature communications | Seylani, Allen; Galsinh, Aman Singh; Tasoula, Alexia; I, Anu R; Camera, Andrea; Calleja-Agius, Jean; Borg, Joseph; Goel, Chirag; Kim, JangKeun; Clark, Kevin B; Das, Saswati; Arif, Shehbeel; Boerrigter, Michael; Coffey, Caroline; Szewczyk, Nathaniel; Mason, Christopher E; Manoli, Maria; Karouia, Fathi; Schwertz, Hansjörg; Beheshti, Afshin; Tulodziecki, Dana | June 11, 2024 | Not Determined |
38862464 | Create Study | Secretome profiling reveals acute changes in oxidative stress, brain homeostasis, and coagulation following short-duration spaceflight. | Nature communications | Houerbi, Nadia; Kim, JangKeun; Overbey, Eliah G; Batra, Richa; Schweickart, Annalise; Patras, Laura; Lucotti, Serena; Ryon, Krista A; Najjar, Deena; Meydan, Cem; Damle, Namita; Chin, Christopher; Narayanan, S Anand; Guarnieri, Joseph W; Widjaja, Gabrielle; Beheshti, Afshin; Tobias, Gabriel; Vatter, Fanny; Hirschberg, Jeremy Wain; Kleinman, Ashley; Afshin, Evan E; MacKay, Matthew; Chen, Qiuying; Miller, Dawson; Gajadhar, Aaron S; Williamson, Lucy; Tandel, Purvi; Yang, Qiu; Chu, Jessica; Benz, Ryan; Siddiqui, Asim; Hornburg, Daniel; Gross, Steven; Shirah, Bader; Krumsiek, Jan; Mateus, Jaime; Mao, Xiao; Matei, Irina; Mason, Christopher E | June 11, 2024 | Not Determined |
38862028 | Create Study | The Space Omics and Medical Atlas (SOMA) and international astronaut biobank. | Nature | Overbey, Eliah G; Kim, JangKeun; Tierney, Braden T; Park, Jiwoon; Houerbi, Nadia; Lucaci, Alexander G; Garcia Medina, Sebastian; Damle, Namita; Najjar, Deena; Grigorev, Kirill; Afshin, Evan E; Ryon, Krista A; Sienkiewicz, Karolina; Patras, Laura; Klotz, Remi; Ortiz, Veronica; MacKay, Matthew; Schweickart, Annalise; Chin, Christopher R; Sierra, Maria A; Valenzuela, Matias F; Dantas, Ezequiel; Nelson, Theodore M; Cekanaviciute, Egle; Deards, Gabriel; Foox, Jonathan; Narayanan, S Anand; Schmidt, Caleb M; Schmidt, Michael A; Schmidt, Julian C; Mullane, Sean; Tigchelaar, Seth Stravers; Levitte, Steven; Westover, Craig; Bhattacharya, Chandrima; Lucotti, Serena; Wain Hirschberg, Jeremy; Proszynski, Jacqueline; Burke, Marissa; Kleinman, Ashley S; Butler, Daniel J; Loy, Conor; Mzava, Omary; Lenz, Joan; Paul, Doru; Mozsary, Christopher; Sanders, Lauren M; Taylor, Lynn E; Patel, Chintan O; Khan, Sharib A; Suhail Mohamad, Mir; Byhaqui, Syed Gufran Ahmad; Aslam, Burhan; Gajadhar, Aaron S; Williamson, Lucy; Tandel, Purvi; Yang, Qiu; Chu, Jessica; Benz, Ryan W; Siddiqui, Asim; Hornburg, Daniel; Blease, Kelly; Moreno, Juan; Boddicker, Andrew; Zhao, Junhua; Lajoie, Bryan; Scott, Ryan T; Gilbert, Rachel R; Lai Polo, San-Huei; Altomare, Andrew; Kruglyak, Semyon; Levy, Shawn; Ariyapala, Ishara; Beer, Joanne; Zhang, Bingqing; Hudson, Briana M; Rininger, Aric; Church, Sarah E; Beheshti, Afshin; Church, George M; Smith, Scott M; Crucian, Brian E; Zwart, Sara R; Matei, Irina; Lyden, David C; Garrett-Bakelman, Francine; Krumsiek, Jan; Chen, Qiuying; Miller, Dawson; Shuga, Joe; Williams, Stephen; Nemec, Corey; Trudel, Guy; Pelchat, Martin; Laneuville, Odette; De Vlaminck, Iwijn; Gross, Steven; Bolton, Kelly L; Bailey, Susan M; Granstein, Richard; Furman, David; Melnick, Ari M; Costes, Sylvain V; Shirah, Bader; Yu, Min; Menon, Anil S; Mateus, Jaime; Meydan, Cem; Mason, Christopher E | August 1, 2024 | Not Determined |
38862026 | Create Study | Molecular and physiological changes in the SpaceX Inspiration4 civilian crew. | Nature | Jones, Christopher W; Overbey, Eliah G; Lacombe, Jerome; Ecker, Adrian J; Meydan, Cem; Ryon, Krista; Tierney, Braden; Damle, Namita; MacKay, Matthew; Afshin, Evan E; Foox, Jonathan; Park, Jiwoon; Nelson, Theodore M; Suhail Mohamad, Mir; Byhaqui, Syed Gufran Ahmad; Aslam, Burhan; Tali, Ummer Akbar; Nisa, Liaqun; Menon, Priya V; Patel, Chintan O; Khan, Sharib A; Ebert, Doug J; Everson, Aaron; Schubert, Michael C; Ali, Nabila N; Sarma, Mallika S; Kim, JangKeun; Houerbi, Nadia; Grigorev, Kirill; Garcia Medina, J Sebastian; Summers, Alexander J; Gu, Jian; Altin, John A; Fattahi, Ali; Hirzallah, Mohammad I; Wu, Jimmy H; Stahn, Alexander C; Beheshti, Afshin; Klotz, Remi; Ortiz, Veronica; Yu, Min; Patras, Laura; Matei, Irina; Lyden, David; Melnick, Ari; Banerjee, Neil; Mullane, Sean; Kleinman, Ashley S; Loesche, Michael; Menon, Anil S; Donoviel, Dorit B; Urquieta, Emmanuel; Mateus, Jaime; Sargsyan, Ashot E; Shelhamer, Mark; Zenhausern, Frederic; Bershad, Eric M; Basner, Mathias; Mason, Christopher E | August 1, 2024 | Not Determined |
38850535 | Create Study | Five autism-associated transcriptional regulators target shared loci proximal to brain-expressed genes. | Cell reports | Fazel Darbandi, Siavash; An, Joon-Yong; Lim, Kenneth; Page, Nicholas F; Liang, Lindsay; Young, David M; Ypsilanti, Athena R; State, Matthew W; Nord, Alex S; Sanders, Stephan J; Rubenstein, John L R | June 25, 2024 | Not Determined |
38798605 | Create Study | CellWalker2: multi-omic discovery of hierarchical cell type relationships and their associations with genomic annotations. | bioRxiv : the preprint server for biology | Hu, Zhirui; Przytycki, Pawel F; Pollard, Katherine S | May 17, 2024 | Not Determined |
38781976 | Create Study | Haploinsufficiency underlies the neurodevelopmental consequences of SLC6A1 variants. | American journal of human genetics | Silva, Dina Buitrago; Trinidad, Marena; Ljungdahl, Alicia; Revalde, Jezrael L; Berguig, Geoffrey Y; Wallace, William; Patrick, Cory S; Bomba, Lorenzo; Arkin, Michelle; Dong, Shan; Estrada, Karol; Hutchinson, Keino; LeBowitz, Jonathan H; Schlessinger, Avner; Johannesen, Katrine M; Møller, Rikke S; Giacomini, Kathleen M; Froelich, Steven; Sanders, Stephan J; Wuster, Arthur | June 6, 2024 | Not Determined |
38781393 | Create Study | Systems biology dissection of PTSD and MDD across brain regions, cell types, and blood. | Science (New York, N.Y.) | Daskalakis, Nikolaos P; Iatrou, Artemis; Chatzinakos, Chris; Jajoo, Aarti; Snijders, Clara; Wylie, Dennis; DiPietro, Christopher P; Tsatsani, Ioulia; Chen, Chia-Yen; Pernia, Cameron D; Soliva-Estruch, Marina; Arasappan, Dhivya; Bharadwaj, Rahul A; Collado-Torres, Leonardo; Wuchty, Stefan; Alvarez, Victor E; Dammer, Eric B; Deep-Soboslay, Amy; Duong, Duc M; Eagles, Nick; Huber, Bertrand R; Huuki, Louise; Holstein, Vincent L; Logue, Mark W; Lugenbühl, Justina F; Maihofer, Adam X; Miller, Mark W; Nievergelt, Caroline M; Pertea, Geo; Ross, Deanna; Sendi, Mohammad S E; Sun, Benjamin B; Tao, Ran; Tooke, James; Wolf, Erika J; Zeier, Zane; PTSD Working Group of Psychiatric Genomics Consortium**; Berretta, Sabina; Champagne, Frances A; Hyde, Thomas; Seyfried, Nicholas T; Shin, Joo Heon; Weinberger, Daniel R; Nemeroff, Charles B; Kleinman, Joel E; Ressler, Kerry J; PTSD Working Group of Psychiatric Genomics Consortium | May 24, 2024 | Not Determined |
38781390 | Create Study | Massively parallel characterization of regulatory elements in the developing human cortex. | Science (New York, N.Y.) | Deng, Chengyu; Whalen, Sean; Steyert, Marilyn; Ziffra, Ryan; Przytycki, Pawel F; Inoue, Fumitaka; Pereira, Daniela A; Capauto, Davide; Norton, Scott; Vaccarino, Flora M; PsychENCODE Consortium‡; Pollen, Alex A; Nowakowski, Tomasz J; Ahituv, Nadav; Pollard, Katherine S; PsychENCODE Consortium | May 24, 2024 | Not Determined |
38781388 | Create Study | Single-cell multi-cohort dissection of the schizophrenia transcriptome. | Science (New York, N.Y.) | Ruzicka, W Brad; Mohammadi, Shahin; Fullard, John F; Davila-Velderrain, Jose; Subburaju, Sivan; Tso, Daniel Reed; Hourihan, Makayla; Jiang, Shan; Lee, Hao-Chih; Bendl, Jaroslav; PsychENCODE Consortium§; Voloudakis, Georgios; Haroutunian, Vahram; Hoffman, Gabriel E; Roussos, Panos; Kellis, Manolis; PsychENCODE Consortium | May 24, 2024 | Not Determined |
38781370 | Create Study | A data-driven single-cell and spatial transcriptomic map of the human prefrontal cortex. | Science (New York, N.Y.) | Huuki-Myers, Louise A; Spangler, Abby; Eagles, Nicholas J; Montgomery, Kelsey D; Kwon, Sang Ho; Guo, Boyi; Grant-Peters, Melissa; Divecha, Heena R; Tippani, Madhavi; Sriworarat, Chaichontat; Nguyen, Annie B; Ravichandran, Prashanthi; Tran, Matthew N; Seyedian, Arta; PsychENCODE Consortium†; Hyde, Thomas M; Kleinman, Joel E; Battle, Alexis; Page, Stephanie C; Ryten, Mina; Hicks, Stephanie C; Martinowich, Keri; Collado-Torres, Leonardo; Maynard, Kristen R; PsychENCODE Consortium | May 24, 2024 | Not Determined |
38781369 | Create Study | Single-cell genomics and regulatory networks for 388 human brains. | Science (New York, N.Y.) | Emani, Prashant S; Liu, Jason J; Clarke, Declan; Jensen, Matthew; Warrell, Jonathan; Gupta, Chirag; Meng, Ran; Lee, Che Yu; Xu, Siwei; Dursun, Cagatay; Lou, Shaoke; Chen, Yuhang; Chu, Zhiyuan; Galeev, Timur; Hwang, Ahyeon; Li, Yunyang; Ni, Pengyu; Zhou, Xiao; PsychENCODE Consortium‡; Bakken, Trygve E; Bendl, Jaroslav; Bicks, Lucy; Chatterjee, Tanima; Cheng, Lijun; Cheng, Yuyan; Dai, Yi; Duan, Ziheng; Flaherty, Mary; Fullard, John F; Gancz, Michael; Garrido-Martín, Diego; Gaynor-Gillett, Sophia; Grundman, Jennifer; Hawken, Natalie; Henry, Ella; Hoffman, Gabriel E; Huang, Ao; Jiang, Yunzhe; Jin, Ting; Jorstad, Nikolas L; Kawaguchi, Riki; Khullar, Saniya; Liu, Jianyin; Liu, Junhao; Liu, Shuang; Ma, Shaojie; Margolis, Michael; Mazariegos, Samantha; Moore, Jill; Moran, Jennifer R; Nguyen, Eric; Phalke, Nishigandha; Pjanic, Milos; Pratt, Henry; Quintero, Diana; Rajagopalan, Ananya S; Riesenmy, Tiernon R; Shedd, Nicole; Shi, Manman; Spector, Megan; Terwilliger, Rosemarie; Travaglini, Kyle J; Wamsley, Brie; Wang, Gaoyuan; Xia, Yan; Xiao, Shaohua; Yang, Andrew C; Zheng, Suchen; Gandal, Michael J; Lee, Donghoon; Lein, Ed S; Roussos, Panos; Sestan, Nenad; Weng, Zhiping; White, Kevin P; Won, Hyejung; Girgenti, Matthew J; Zhang, Jing; Wang, Daifeng; Geschwind, Daniel; Gerstein, Mark; PsychENCODE Consortium | May 24, 2024 | Not Determined |
38781368 | Create Study | Cross-ancestry atlas of gene, isoform, and splicing regulation in the developing human brain. | Science (New York, N.Y.) | Wen, Cindy; Margolis, Michael; Dai, Rujia; Zhang, Pan; Przytycki, Pawel F; Vo, Daniel D; Bhattacharya, Arjun; Matoba, Nana; Tang, Miao; Jiao, Chuan; Kim, Minsoo; Tsai, Ellen; Hoh, Celine; Aygün, Nil; Walker, Rebecca L; Chatzinakos, Christos; Clarke, Declan; Pratt, Henry; PsychENCODE Consortium†; Peters, Mette A; Gerstein, Mark; Daskalakis, Nikolaos P; Weng, Zhiping; Jaffe, Andrew E; Kleinman, Joel E; Hyde, Thomas M; Weinberger, Daniel R; Bray, Nicholas J; Sestan, Nenad; Geschwind, Daniel H; Roeder, Kathryn; Gusev, Alexander; Pasaniuc, Bogdan; Stein, Jason L; Love, Michael I; Pollard, Katherine S; Liu, Chunyu; Gandal, Michael J; PsychENCODE Consortium | May 24, 2024 | Not Determined |
38781336 | Create Study | Evaluating performance and applications of sample-wise cell deconvolution methods on human brain transcriptomic data. | Science advances | Dai, Rujia; Chu, Tianyao; Zhang, Ming; Wang, Xuan; Jourdon, Alexandre; Wu, Feinan; Mariani, Jessica; Vaccarino, Flora M; Lee, Donghoon; Fullard, John F; Hoffman, Gabriel E; Roussos, Panos; Wang, Yue; Wang, Xusheng; Pinto, Dalila; Wang, Sidney H; Zhang, Chunling; PsychENCODE consortium; Chen, Chao; Liu, Chunyu | May 24, 2024 | Not Determined |
38781321 | Create Study | Transcriptomic sex differences in postmortem brain samples from patients with psychiatric disorders. | Science translational medicine | Xia, Yan; Xia, Cuihua; Jiang, Yi; Chen, Yu; Zhou, Jiaqi; Dai, Rujia; Han, Cong; Mao, Zhongzheng; PsychENCODE Consortium; Liu, Chunyu; Chen, Chao | May 29, 2024 | Not Determined |
38778015 | Create Study | Integrating human endogenous retroviruses into transcriptome-wide association studies highlights novel risk factors for major psychiatric conditions. | Nature communications | Duarte, Rodrigo R R; Pain, Oliver; Bendall, Matthew L; de Mulder Rougvie, Miguel; Marston, Jez L; Selvackadunco, Sashika; Troakes, Claire; Leung, Szi Kay; Bamford, Rosemary A; Mill, Jonathan; O'Reilly, Paul F; Srivastava, Deepak P; Nixon, Douglas F; Powell, Timothy R | May 22, 2024 | Not Determined |
38766095 | Create Study | Prioritizing disease-related rare variants by integrating gene expression data. | Research square | Guo, Hanmin; Urban, Alexander Eckehart; Wong, Wing Hung | May 10, 2024 | Not Determined |
38759644 | Create Study | Rigor and reproducibility in human brain organoid research: Where we are and where we need to go. | Stem cell reports | Sandoval, Soraya O; Cappuccio, Gerarda; Kruth, Karina; Osenberg, Sivan; Khalil, Saleh M; Méndez-Albelo, Natasha M; Padmanabhan, Krishnan; Wang, Daifeng; Niciu, Mark J; Bhattacharyya, Anita; Stein, Jason L; Sousa, André M M; Waxman, Elisa A; Buttermore, Elizabeth D; Whye, Dosh; Sirois, Carissa L; Cross-IDDRC Human Stem Cell Consortium; Williams, Aislinn; Maletic-Savatic, Mirjana; Zhao, Xinyu | June 11, 2024 | Not Determined |
38713721 | Create Study | Cartography of teneurin and latrophilin expression reveals spatiotemporal axis heterogeneity in the mouse hippocampus during development. | PLoS biology | Liakath-Ali, Kif; Refaee, Rebecca; Südhof, Thomas C | May 1, 2024 | Not Determined |
38712228 | Create Study | Massively parallel reporter assays and mouse transgenic assays provide complementary information about neuronal enhancer activity. | bioRxiv : the preprint server for biology | Kosicki, Michael; Cintrón, Dianne Laboy; Page, Nicholas F; Georgakopoulos-Soares, Ilias; Akiyama, Jennifer A; Plajzer-Frick, Ingrid; Novak, Catherine S; Kato, Momoe; Hunter, Riana D; von Maydell, Kianna; Barton, Sarah; Godfrey, Patrick; Beckman, Erik; Sanders, Stephan J; Pennacchio, Len A; Ahituv, Nadav | April 23, 2024 | Not Determined |
38712198 | Create Study | An integrated single-nucleus and spatial transcriptomics atlas reveals the molecular landscape of the human hippocampus. | bioRxiv : the preprint server for biology | Nelson, Erik D; Tippani, Madhavi; Ramnauth, Anthony D; Divecha, Heena R; Miller, Ryan A; Eagles, Nicholas J; Pattie, Elizabeth A; Kwon, Sang Ho; Bach, Svitlana V; Kaipa, Uma M; Yao, Jianing; Kleinman, Joel E; Collado-Torres, Leonardo; Han, Shizhong; Maynard, Kristen R; Hyde, Thomas M; Martinowich, Keri; Page, Stephanie C; Hicks, Stephanie C | April 28, 2024 | Not Determined |
38659857 | Create Study | Precision and Accuracy of Single-Cell/Nuclei RNA Sequencing Data. | bioRxiv : the preprint server for biology | Dai, Rujia; Zhang, Ming; Chu, Tianyao; Kopp, Richard; Zhang, Chunling; Liu, Kefu; Wang, Yue; Wang, Xusheng; Chen, Chao; Liu, Chunyu | April 15, 2024 | Not Determined |
38658803 | Create Study | Multimodal joint deconvolution and integrative signature selection in proteomics. | Communications biology | Pan, Yue; Wang, Xusheng; Sun, Jiao; Liu, Chunyu; Peng, Junmin; Li, Qian | April 24, 2024 | Not Determined |
38645177 | Create Study | Sex differences in brain cell-type specific chromatin accessibility in schizophrenia. | Research square | Roussos, Panos; Ma, Yixuan; Girdhar, Kiran; Hoffman, Gabriel; Fullard, John; Bendl, Jaroslav | April 4, 2024 | Not Determined |
38645094 | Create Study | De novo variants in the non-coding spliceosomal snRNA gene RNU4-2 are a frequent cause of syndromic neurodevelopmental disorders. | medRxiv : the preprint server for health sciences | Chen, Yuyang; Dawes, Ruebena; Kim, Hyung Chul; Stenton, Sarah L; Walker, Susan; Ljungdahl, Alicia; Lord, Jenny; Ganesh, Vijay S; Ma, Jialan; Martin-Geary, Alexandra C; Lemire, Gabrielle; D'Souza, Elston N; Dong, Shan; Ellingford, Jamie M; Adams, David R; Allan, Kirsten; Bakshi, Madhura; Baldwin, Erin E; Berger, Seth I; Bernstein, Jonathan A; Brown, Natasha J; Burrage, Lindsay C; Chapman, Kimberly; Compton, Alison G; Cunningham, Chloe A; D'Souza, Precilla; Délot, Emmanuèle C; Dias, Kerith-Rae; Elias, Ellen R; Evans, Carey-Anne; Ewans, Lisa; Ezell, Kimberly; Fraser, Jamie L; Gallacher, Lyndon; Genetti, Casie A; Grant, Christina L; Haack, Tobias; Kuechler, Alma; Lalani, Seema R; Leitão, Elsa; Fevre, Anna Le; Leventer, Richard J; Liebelt, Jan E; Lockhart, Paul J; Ma, Alan S; Macnamara, Ellen F; Maurer, Taylor M; Mendez, Hector R; Montgomery, Stephen B; Nassogne, Marie-Cécile; Neumann, Serena; O'Leary, Melanie; Palmer, Elizabeth E; Phillips, John; Pitsava, Georgia; Pysar, Ryan; Rehm, Heidi L; Reuter, Chloe M; Revencu, Nicole; Riess, Angelika; Rius, Rocio; Rodan, Lance; Roscioli, Tony; Rosenfeld, Jill A; Sachdev, Rani; Simons, Cas; Sisodiya, Sanjay M; Snell, Penny; Clair, Laura; Stark, Zornitza; Tan, Tiong Yang; Tan, Natalie B; Temple, Suzanna El; Thorburn, David R; Tifft, Cynthia J; Uebergang, Eloise; VanNoy, Grace E; Vilain, Eric; Viskochil, David H; Wedd, Laura; Wheeler, Matthew T; White, Susan M; Wojcik, Monica; Wolfe, Lynne A; Wolfenson, Zoe; Xiao, Changrui; Zocche, David; Rubenstein, John L; Markenscoff-Papadimitriou, Eirene; Fica, Sebastian M; Baralle, Diana; Depienne, Christel; MacArthur, Daniel G; Howson, Joanna Mm; Sanders, Stephan J; O'Donnell-Luria, Anne; Whiffin, Nicola | April 9, 2024 | Not Determined |
38634106 | Create Study | Genome and clonal hematopoiesis stability contrasts with immune, cfDNA, mitochondrial, and telomere length changes during short duration spaceflight. | Precision clinical medicine | Garcia-Medina, J Sebastian; Sienkiewicz, Karolina; Narayanan, S Anand; Overbey, Eliah G; Grigorev, Kirill; Ryon, Krista A; Burke, Marissa; Proszynski, Jacqueline; Tierney, Braden; Schmidt, Caleb M; Mencia-Trinchant, Nuria; Klotz, Remi; Ortiz, Veronica; Foox, Jonathan; Chin, Christopher; Najjar, Deena; Matei, Irina; Chan, Irenaeus; Cruchaga, Carlos; Kleinman, Ashley; Kim, JangKeun; Lucaci, Alexander; Loy, Conor; Mzava, Omary; De Vlaminck, Iwijn; Singaraju, Anvita; Taylor, Lynn E; Schmidt, Julian C; Schmidt, Michael A; Blease, Kelly; Moreno, Juan; Boddicker, Andrew; Zhao, Junhua; Lajoie, Bryan; Altomare, Andrew; Kruglyak, Semyon; Levy, Shawn; Yu, Min; Hassane, Duane C; Bailey, Susan M; Bolton, Kelly; Mateus, Jaime; Mason, Christopher E | March 1, 2024 | Not Determined |
38589365 | Create Study | The broad impact of cell death genes on the human disease phenome. | Cell death & disease | Rich, Abigail L; Lin, Phillip; Gamazon, Eric R; Zinkel, Sandra S | April 8, 2024 | Not Determined |
38585978 | Create Study | Immediate-Early Genes as Influencers in Genetic Networks and their Role in Alzheimer''s Disease. | bioRxiv : the preprint server for biology | Zachariou, Margarita; Loizidou, Eleni M; Spyrou, George M | March 29, 2024 | Not Determined |
38570506 | Create Study | Loss of CREBBP and KMT2D cooperate to accelerate lymphomagenesis and shape the lymphoma immune microenvironment. | Nature communications | Li, Jie; Chin, Christopher R; Ying, Hsia-Yuan; Meydan, Cem; Teater, Matthew R; Xia, Min; Farinha, Pedro; Takata, Katsuyoshi; Chu, Chi-Shuen; Jiang, Yiyue; Eagles, Jenna; Passerini, Verena; Tang, Zhanyun; Rivas, Martin A; Weigert, Oliver; Pugh, Trevor J; Chadburn, Amy; Steidl, Christian; Scott, David W; Roeder, Robert G; Mason, Christopher E; Zappasodi, Roberta; Béguelin, Wendy; Melnick, Ari M | April 3, 2024 | Not Determined |
38562832 | Create Study | Validation of Enhancer Regions in Primary Human Neural Progenitor Cells using Capture STARR-seq. | bioRxiv : the preprint server for biology | Gaynor-Gillett, Sophia C; Cheng, Lijun; Shi, Manman; Liu, Jason; Wang, Gaoyuan; Spector, Megan; Flaherty, Mary; Wall, Martha; Hwang, Ahyeon; Gu, Mengting; Chen, Zhanlin; Chen, Yuhang; Consortium, PsychENCODE; Moran, Jennifer R; Zhang, Jing; Lee, Donghoon; Gerstein, Mark; Geschwind, Daniel; White, Kevin P | March 18, 2024 | Not Determined |
38562822 | Create Study | Single-cell genomics and regulatory networks for 388 human brains. | bioRxiv : the preprint server for biology | Emani, Prashant S; Liu, Jason J; Clarke, Declan; Jensen, Matthew; Warrell, Jonathan; Gupta, Chirag; Meng, Ran; Lee, Che Yu; Xu, Siwei; Dursun, Cagatay; Lou, Shaoke; Chen, Yuhang; Chu, Zhiyuan; Galeev, Timur; Hwang, Ahyeon; Li, Yunyang; Ni, Pengyu; Zhou, Xiao; PsychENCODE Consortium; Bakken, Trygve E; Bendl, Jaroslav; Bicks, Lucy; Chatterjee, Tanima; Cheng, Lijun; Cheng, Yuyan; Dai, Yi; Duan, Ziheng; Flaherty, Mary; Fullard, John F; Gancz, Michael; Garrido-Martín, Diego; Gaynor-Gillett, Sophia; Grundman, Jennifer; Hawken, Natalie; Henry, Ella; Hoffman, Gabriel E; Huang, Ao; Jiang, Yunzhe; Jin, Ting; Jorstad, Nikolas L; Kawaguchi, Riki; Khullar, Saniya; Liu, Jianyin; Liu, Junhao; Liu, Shuang; Ma, Shaojie; Margolis, Michael; Mazariegos, Samantha; Moore, Jill; Moran, Jennifer R; Nguyen, Eric; Phalke, Nishigandha; Pjanic, Milos; Pratt, Henry; Quintero, Diana; Rajagopalan, Ananya S; Riesenmy, Tiernon R; Shedd, Nicole; Shi, Manman; Spector, Megan; Terwilliger, Rosemarie; Travaglini, Kyle J; Wamsley, Brie; Wang, Gaoyuan; Xia, Yan; Xiao, Shaohua; Yang, Andrew C; Zheng, Suchen; Gandal, Michael J; Lee, Donghoon; Lein, Ed S; Roussos, Panos; Sestan, Nenad; Weng, Zhiping; White, Kevin P; Won, Hyejung; Girgenti, Matthew J; Zhang, Jing; Wang, Daifeng; Geschwind, Daniel; Gerstein, Mark | March 30, 2024 | Not Determined |
38562756 | Create Study | Prioritizing disease-related rare variants by integrating gene expression data. | bioRxiv : the preprint server for biology | Guo, Hanmin; Urban, Alexander Eckehart; Wong, Wing Hung | March 21, 2024 | Not Determined |
38562739 | Create Study | Identifying associations of de novo noncoding variants with autism through integration of gene expression, sequence and sex information. | bioRxiv : the preprint server for biology | Li, Runjia; Ernst, Jason | March 21, 2024 | Not Determined |
38559190 | Create Study | A systems-biology approach connects aging mechanisms with Alzheimer''s disease pathogenesis. | bioRxiv : the preprint server for biology | Leventhal, Matthew J; Zanella, Camila A; Kang, Byunguk; Peng, Jiajie; Gritsch, David; Liao, Zhixiang; Bukhari, Hassan; Wang, Tao; Pao, Ping-Chieh; Danquah, Serwah; Benetatos, Joseph; Nehme, Ralda; Farhi, Samouil; Tsai, Li-Huei; Dong, Xianjun; Scherzer, Clemens R; Feany, Mel B; Fraenkel, Ernest | March 17, 2024 | Not Determined |
38559085 | Create Study | Functional associations of evolutionarily recent human genes exhibit sensitivity to the 3D genome landscape and disease. | bioRxiv : the preprint server for biology | Fleck, Katherine; Luria, Victor; Garag, Nitanta; Karger, Amir; Hunter, Trevor; Marten, Daniel; Phu, William; Nam, Kee-Myoung; Sestan, Nenad; O'Donnell-Luria, Anne H; Erceg, Jelena | March 17, 2024 | Not Determined |
38528004 | Create Study | SKA2 regulated hyperactive secretory autophagy drives neuroinflammation-induced neurodegeneration. | Nature communications | Hartmann, Jakob; Bajaj, Thomas; Otten, Joy; Klengel, Claudia; Ebert, Tim; Gellner, Anne-Kathrin; Junglas, Ellen; Hafner, Kathrin; Anderzhanova, Elmira A; Tang, Fiona; Missig, Galen; Rexrode, Lindsay; Trussell, Daniel T; Li, Katelyn X; Pöhlmann, Max L; Mackert, Sarah; Geiger, Thomas M; Heinz, Daniel E; Lardenoije, Roy; Dedic, Nina; McCullough, Kenneth M; Próchnicki, Tomasz; Rhomberg, Thomas; Martinelli, Silvia; Payton, Antony; Robinson, Andrew C; Stein, Valentin; Latz, Eicke; Carlezon Jr, William A; Hausch, Felix; Schmidt, Mathias V; Murgatroyd, Chris; Berretta, Sabina; Klengel, Torsten; Pantazopoulos, Harry; Ressler, Kerry J; Gassen, Nils C | March 25, 2024 | Not Determined |
38510173 | Create Study | VistoSeg: Processing utilities for high-resolution images for spatially resolved transcriptomics data. | Biological imaging | Tippani, Madhavi; Divecha, Heena R; Catallini 2nd, Joseph L; Kwon, Sang H; Weber, Lukas M; Spangler, Abby; Jaffe, Andrew E; Hyde, Thomas M; Kleinman, Joel E; Hicks, Stephanie C; Martinowich, Keri; Collado-Torres, Leonardo; Page, Stephanie C; Maynard, Kristen R | January 1, 2023 | Not Determined |
38487694 | Create Study | Performant web-based interactive visualization tool for spatially-resolved transcriptomics experiments. | Biological imaging | Sriworarat, Chaichontat; Nguyen, Annie; Eagles, Nicholas J; Collado-Torres, Leonardo; Martinowich, Keri; Maynard, Kristen R; Hicks, Stephanie C | January 1, 2023 | Not Determined |
38405973 | Create Study | Brain eQTLs of European, African American, and Asian ancestry improve interpretation of schizophrenia GWAS. | medRxiv : the preprint server for health sciences | Chen, Yu; Liu, Sihan; Ren, Zongyao; Wang, Feiran; Jiang, Yi; Dai, Rujia; Duan, Fangyuan; Han, Cong; Ning, Zhilin; Xia, Yan; Li, Miao; Yuan, Kai; Qiu, Wenying; Yan, Xiao-Xin; Dai, Jiapei; Kopp, Richard F; Huang, Jufang; Xu, Shuhua; Tang, Beisha; Gamazon, Eric R; Bigdeli, Tim; Gershon, Elliot; Huang, Hailiang; Ma, Chao; Liu, Chunyu; Chen, Chao | February 16, 2024 | Not Determined |
38405805 | Create Study | Benchmark of cellular deconvolution methods using a multi-assay reference dataset from postmortem human prefrontal cortex. | bioRxiv : the preprint server for biology | Huuki-Myers, Louise A; Montgomery, Kelsey D; Kwon, Sang Ho; Cinquemani, Sophia; Eagles, Nicholas J; Gonzalez-Padilla, Daianna; Maden, Sean K; Kleinman, Joel E; Hyde, Thomas M; Hicks, Stephanie C; Maynard, Kristen R; Collado-Torres, Leonardo | April 7, 2024 | Not Determined |
38382530 | Create Study | Thalamocortical organoids enable in vitro modeling of 22q11.2 microdeletion associated with neuropsychiatric disorders. | Cell stem cell | Shin, David; Kim, Chang N; Ross, Jayden; Hennick, Kelsey M; Wu, Sih-Rong; Paranjape, Neha; Leonard, Rachel; Wang, Jerrick C; Keefe, Matthew G; Pavlovic, Bryan J; Donohue, Kevin C; Moreau, Clara; Wigdor, Emilie M; Larson, H Hanh; Allen, Denise E; Cadwell, Cathryn R; Bhaduri, Aparna; Popova, Galina; Bearden, Carrie E; Pollen, Alex A; Jacquemont, Sebastien; Sanders, Stephan J; Haussler, David; Wiita, Arun P; Frost, Nicholas A; Sohal, Vikaas S; Nowakowski, Tomasz J | March 7, 2024 | Not Determined |
38370821 | Create Study | Functional 3''-UTR Variants Identify Regulatory Mechanisms Impacting Alcohol Use Disorder and Related Traits. | bioRxiv : the preprint server for biology | Chen, Andy B; Yu, Xuhong; Thapa, Kriti S; Gao, Hongyu; Reiter, Jill L; Xuei, Xiaoling; Tsai, Andy P; Landreth, Gary E; Lai, Dongbing; Wang, Yue; Foroud, Tatiana M; Tischfield, Jay A; Edenberg, Howard J; Liu, Yunlong | February 5, 2024 | Not Determined |
38365907 | Create Study | Characterization of enhancer activity in early human neurodevelopment using Massively Parallel Reporter Assay (MPRA) and forebrain organoids. | Scientific reports | Capauto, Davide; Wang, Yifan; Wu, Feinan; Norton, Scott; Mariani, Jessica; Inoue, Fumitaka; Crawford, Gregory E; Ahituv, Nadav; Abyzov, Alexej; Vaccarino, Flora M | February 16, 2024 | Not Determined |
38352580 | Create Study | Spatial domain detection using contrastive self-supervised learning for spatial multi-omics technologies. | bioRxiv : the preprint server for biology | Yao, Jianing; Yu, Jinglun; Caffo, Brian; Page, Stephanie C; Martinowich, Keri; Hicks, Stephanie C | February 4, 2024 | Not Determined |
38321095 | Create Study | Network-based drug repurposing for schizophrenia. | Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology | Truong, Trang T T; Liu, Zoe S J; Panizzutti, Bruna; Kim, Jee Hyun; Dean, Olivia M; Berk, Michael; Walder, Ken | May 1, 2024 | Not Determined |
38314955 | Create Study | Transcriptome-Wide Association Studies (TWAS): Methodologies, Applications, and Challenges. | Current protocols | Evans, Patrick; Nagai, Taylor; Konkashbaev, Anuar; Zhou, Dan; Knapik, Ela W; Gamazon, Eric R | February 1, 2024 | Not Determined |
38266073 | Create Study | The gene expression landscape of the human locus coeruleus revealed by single-nucleus and spatially-resolved transcriptomics. | eLife | Weber, Lukas M; Divecha, Heena R; Tran, Matthew N; Kwon, Sang Ho; Spangler, Abby; Montgomery, Kelsey D; Tippani, Madhavi; Bharadwaj, Rahul; Kleinman, Joel E; Page, Stephanie C; Hyde, Thomas M; Collado-Torres, Leonardo; Maynard, Kristen R; Martinowich, Keri; Hicks, Stephanie C | January 24, 2024 | Not Determined |
38260577 | Create Study | Polygenic risk for schizophrenia converges on alternative polyadenylation as molecular mechanism underlying synaptic impairment. | bioRxiv : the preprint server for biology | Raabe, Florian J; Hausruckinger, Anna; Gagliardi, Miriam; Ahmad, Ruhel; Almeida, Valeria; Galinski, Sabrina; Hoffmann, Anke; Weigert, Liesa; Rummel, Christine K; Murek, Vanessa; Trastulla, Lucia; Jimenez-Barron, Laura; Atella, Alessia; Maidl, Susanne; Menegaz, Danusa; Hauger, Barbara; Wagner, Eva-Maria; Gabellini, Nadia; Kauschat, Beate; Riccardo, Sara; Cesana, Marcella; Papiol, Sergi; Sportelli, Vincenza; Rex-Haffner, Monika; Stolte, Sebastian J; Wehr, Michael C; Salcedo, Tatiana Oviedo; Papazova, Irina; Detera-Wadleigh, Sevilla; McMahon, Francis J; Schmitt, Andrea; Falkai, Peter; Hasan, Alkomiet; Cacchiarelli, Davide; Dannlowski, Udo; Nenadić, Igor; Kircher, Tilo; Scheuss, Volker; Eder, Matthias; Binder, Elisabeth B; Spengler, Dietmar; Rossner, Moritz J; Ziller, Michael J | January 13, 2024 | Not Determined |
38254182 | Create Study | PICALO: principal interaction component analysis for the identification of discrete technical, cell-type, and environmental factors that mediate eQTLs. | Genome biology | Vochteloo, Martijn; Deelen, Patrick; Vink, Britt; BIOS Consortium; Tsai, Ellen A; Runz, Heiko; Andreu-Sánchez, Sergio; Fu, Jingyuan; Zhernakova, Alexandra; Westra, Harm-Jan; Franke, Lude | January 22, 2024 | Not Determined |
38212163 | Create Study | Latent-state and model-based learning in PTSD. | Trends in neurosciences | Cisler, Josh M; Dunsmoor, Joseph E; Fonzo, Gregory A; Nemeroff, Charles B | February 1, 2024 | Not Determined |
38145985 | Create Study | Convergence of the dysregulated regulome in schizophrenia with polygenic risk and evolutionarily constrained enhancers. | Molecular psychiatry | Dong, Pengfei; Voloudakis, Georgios; Fullard, John F; Hoffman, Gabriel E; Roussos, Panos | March 1, 2024 | Not Determined |
38107654 | Create Study | escheR: unified multi-dimensional visualizations with Gestalt principles. | Bioinformatics advances | Guo, Boyi; Huuki-Myers, Louise A; Grant-Peters, Melissa; Collado-Torres, Leonardo; Hicks, Stephanie C | January 1, 2023 | Not Determined |
38060137 | Create Study | The Role of KDM2A and H3K36me2 Demethylation in Modulating MAPK Signaling During Neurodevelopment. | Neuroscience bulletin | Ren, Zongyao; Tang, Haiyan; Zhang, Wendiao; Guo, Minghui; Cui, Jingjie; Wang, Hua; Xie, Bin; Yu, Jing; Chen, Yonghao; Zhang, Ming; Han, Cong; Chu, Tianyao; Liang, Qiuman; Zhao, Shunan; Huang, Yingjie; He, Xuelian; Liu, Kefu; Liu, Chunyu; Chen, Chao | August 1, 2024 | Not Determined |
38055821 | Create Study | Human-specific features and developmental dynamics of the brain N-glycome. | Science advances | Klarić, Thomas S; Gudelj, Ivan; Santpere, Gabriel; Novokmet, Mislav; Vučković, Frano; Ma, Shaojie; Doll, Hannah M; Risgaard, Ryan; Bathla, Shveta; Karger, Amir; Nairn, Angus C; Luria, Victor; Bečeheli, Ivona; Sherwood, Chet C; Ely, John J; Hof, Patrick R; Sousa, André M M; Josić, Djuro; Lauc, Gordan; Sestan, Nenad | December 8, 2023 | Not Determined |
38045413 | Create Study | Spatiotemporal analysis of gene expression in the human dentate gyrus reveals age-associated changes in cellular maturation and neuroinflammation. | bioRxiv : the preprint server for biology | Ramnauth, Anthony D; Tippani, Madhavi; Divecha, Heena R; Papariello, Alexis R; Miller, Ryan A; Nelson, Erik D; Pattie, Elizabeth A; Kleinman, Joel E; Maynard, Kristen R; Collado-Torres, Leonardo; Hyde, Thomas M; Martinowich, Keri; Hicks, Stephanie C; Page, Stephanie C | May 6, 2024 | Not Determined |
38036788 | Create Study | Isoform-level transcriptome-wide association uncovers genetic risk mechanisms for neuropsychiatric disorders in the human brain. | Nature genetics | Bhattacharya, Arjun; Vo, Daniel D; Jops, Connor; Kim, Minsoo; Wen, Cindy; Hervoso, Jonatan L; Pasaniuc, Bogdan; Gandal, Michael J | December 1, 2023 | Not Determined |
37985822 | Create Study | Multi-ancestry genome-wide association study of cannabis use disorder yields insight into disease biology and public health implications. | Nature genetics | Levey, Daniel F; Galimberti, Marco; Deak, Joseph D; Wendt, Frank R; Bhattacharya, Arjun; Koller, Dora; Harrington, Kelly M; Quaden, Rachel; Johnson, Emma C; Gupta, Priya; Biradar, Mahantesh; Lam, Max; Cooke, Megan; Rajagopal, Veera M; Empke, Stefany L L; Zhou, Hang; Nunez, Yaira Z; Kranzler, Henry R; Edenberg, Howard J; Agrawal, Arpana; Smoller, Jordan W; Lencz, Todd; Hougaard, David M; Børglum, Anders D; Demontis, Ditte; Veterans Affairs Million Veteran Program; Gaziano, J Michael; Gandal, Michael J; Polimanti, Renato; Stein, Murray B; Gelernter, Joel | December 1, 2023 | Not Determined |
37961453 | Create Study | Mapping the landscape of lineage-specific dynamic regulation of gene expression using single-cell transcriptomics and application to genetics of complex disease. | medRxiv : the preprint server for health sciences | Abe, Hanna; Lin, Phillip; Zhou, Dan; Ruderfer, Douglas M; Gamazon, Eric R | December 14, 2023 | Not Determined |
37961354 | Create Study | AlphaMissense is better correlated with functional assays of missense impact than earlier prediction algorithms. | bioRxiv : the preprint server for biology | Ljungdahl, Alicia; Kohani, Sayeh; Page, Nicholas F; Wells, Eloise S; Wigdor, Emilie M; Dong, Shan; Sanders, Stephan J | October 27, 2023 | Not Determined |
37949069 | Create Study | FMRP phosphorylation modulates neuronal translation through YTHDF1. | Molecular cell | Zou, Zhongyu; Wei, Jiangbo; Chen, Yantao; Kang, Yunhee; Shi, Hailing; Yang, Fan; Shi, Zhuoyue; Chen, Shijie; Zhou, Ying; Sepich-Poore, Caraline; Zhuang, Xiaoxi; Zhou, Xiaoming; Jiang, Hualiang; Wen, Zhexing; Jin, Peng; Luo, Cheng; He, Chuan | December 7, 2023 | Not Determined |
37932283 | Create Study | Phylogenomics, phenotypic, and functional traits of five novel (Earth-derived) bacterial species isolated from the International Space Station and their prevalence in metagenomes. | Scientific reports | Simpson, Anna C; Sengupta, Pratyay; Zhang, Flora; Hameed, Asif; Parker, Ceth W; Singh, Nitin K; Miliotis, Georgios; Rekha, Punchappady D; Raman, Karthik; Mason, Christopher E; Venkateswaran, Kasthuri | November 6, 2023 | Not Determined |
37904203 | Create Study | DeepGAMI: deep biologically guided auxiliary learning for multimodal integration and imputation to improve genotype-phenotype prediction. | Genome medicine | Chandrashekar, Pramod Bharadwaj; Alatkar, Sayali; Wang, Jiebiao; Hoffman, Gabriel E; He, Chenfeng; Jin, Ting; Khullar, Saniya; Bendl, Jaroslav; Fullard, John F; Roussos, Panos; Wang, Daifeng | October 31, 2023 | Not Determined |
37886514 | Create Study | The neuronal chromatin landscape in adult schizophrenia brains is linked to early fetal development. | Research square | Girdhar, Kiran; Bendl, Jaroslav; Baumgartner, Andrew; Therrien, Karen; Venkatesh, Sanan; Mathur, Deepika; Dong, Pengfei; Rahman, Samir; Kleopoulos, Steven P; Misir, Ruth; Reach, Sarah M; Auluck, Pavan K; Marenco, Stefano; Lewis, David A; Haroutunian, Vahram; Funk, Cory; Voloudakis, Georgios; Hoffman, Gabriel E; Fullard, John F; Roussos, Panos | October 2, 2023 | Not Determined |
37886447 | Create Study | Viral activation and ecological restructuring characterize a microbiome axis of spaceflight-associated immune activation. | Research square | Tierney, Braden T; Kim, JangKeun; Overbey, Eliah G; Ryon, Krista A; Foox, Jonathan; Sierra, Maria; Bhattacharya, Chandrima; Damle, Namita; Najjar, Deena; Park, Jiwoon; Garcia Medina, Sebastian; Houerbi, Nadia; Meydan, Cem; Wain Hershberg, Jeremy; Qiu, Jake; Kleinman, Ashley; Al Ghalith, Gabe; MacKay, Matthew; Afshin, Evan E; Dhir, Raja; Borg, Joseph; Gatt, Christine; Brereton, Nicholas; Readhead, Ben; Beyaz, Semir; Venkateswaran, Kasthuri J; Blease, Kelly; Moreno, Juan; Boddicker, Andrew; Zhao, Junhua; Lajoie, Bryan; Scott, Ryan T; Altomare, Andrew; Kruglyak, Semyon; Levy, Shawn; Church, George; Mason, Christopher E | October 10, 2023 | Not Determined |
37873320 | Create Study | The neuronal chromatin landscape in adult schizophrenia brains is linked to early fetal development. | medRxiv : the preprint server for health sciences | Girdhar, Kiran; Bendl, Jaroslav; Baumgartner, Andrew; Therrien, Karen; Venkatesh, Sanan; Mathur, Deepika; Dong, Pengfei; Rahman, Samir; Kleopoulos, Steven P; Misir, Ruth; Reach, Sarah M; Auluck, Pavan K; Marenco, Stefano; Lewis, David A; Haroutunian, Vahram; Funk, Cory; Voloudakis, Georgios; Hoffman, Gabriel E; Fullard, John F; Roussos, Panos | October 3, 2023 | Not Determined |
37873195 | Create Study | The impact of common variants on gene expression in the human brain: from RNA to protein to schizophrenia risk. | bioRxiv : the preprint server for biology | Liang, Qiuman; Jiang, Yi; Shieh, Annie W; Zhou, Dan; Chen, Rui; Wang, Feiran; Xu, Meng; Niu, Mingming; Wang, Xusheng; Pinto, Dalila; Wang, Yue; Cheng, Lijun; Vadukapuram, Ramu; Zhang, Chunling; Grennan, Kay; Giase, Gina; PsychENCODE Consortium; White, Kevin P; Peng, Junming; Li, Bingshan; Liu, Chunyu; Chen, Chao; Wang, Sidney H | November 10, 2023 | Not Determined |
37858340 | Create Study | Abl2 repairs microtubules and phase separates with tubulin to promote microtubule nucleation. | Current biology : CB | Duan, Daisy; Lyu, Wanqing; Chai, Pengxin; Ma, Shaojie; Wu, Kuanlin; Wu, Chunxiang; Xiong, Yong; Sestan, Nenad; Zhang, Kai; Koleske, Anthony J | November 6, 2023 | Not Determined |
37848091 | Create Study | Evaluating traumatic event scoring schemas for their predictive value to concurrent diagnostic profiles: Texas Childhood Trauma Research Network. | Journal of affective disorders | Aksan, Nazan; Guzick, Andrew G; Taylor, Leslie; Richmond, Robyn; Liberzon, Israel; Cross, Jeremyra; Garza, Cynthia; Rousseau, Justin; Shahidullah, Jeffrey D; Clark, Shaunna L; Rathouz, Paul J; Dodd, Cody G; Cisler, Josh; Newport, D Jeffrey; Wagner, Karen D; Nemeroff, Charles B | January 15, 2024 | Not Determined |
37831723 | Create Study | Investigating trait variability of gene co-expression network architecture in brain by controlling for genomic risk of schizophrenia. | PLoS genetics | Radulescu, Eugenia; Chen, Qiang; Pergola, Giulio; Di Carlo, Pasquale; Han, Shizhong; Shin, Joo Heon; Hyde, Thomas M; Kleinman, Joel E; Weinberger, Daniel R | October 1, 2023 | Not Determined |
37824652 | Create Study | Molecular programs of regional specification and neural stem cell fate progression in macaque telencephalon. | Science (New York, N.Y.) | Micali, Nicola; Ma, Shaojie; Li, Mingfeng; Kim, Suel-Kee; Mato-Blanco, Xoel; Sindhu, Suvimal Kumar; Arellano, Jon I; Gao, Tianliuyun; Shibata, Mikihito; Gobeske, Kevin T; Duque, Alvaro; Santpere, Gabriel; Sestan, Nenad; Rakic, Pasko | October 13, 2023 | Not Determined |
37824614 | Create Study | Multi-omic profiling of the developing human cerebral cortex at the single-cell level. | Science advances | Zhu, Kaiyi; Bendl, Jaroslav; Rahman, Samir; Vicari, James M; Coleman, Claire; Clarence, Tereza; Latouche, Ovaun; Tsankova, Nadejda M; Li, Aiqun; Brennand, Kristen J; Lee, Donghoon; Yuan, Guo-Cheng; Fullard, John F; Roussos, Panos | October 13, 2023 | Not Determined |
37820724 | Create Study | Species-specific FMRP regulation of RACK1 is critical for prenatal cortical development. | Neuron | Shen, Minjie; Sirois, Carissa L; Guo, Yu; Li, Meng; Dong, Qiping; Méndez-Albelo, Natasha M; Gao, Yu; Khullar, Saniya; Kissel, Lee; Sandoval, Soraya O; Wolkoff, Natalie E; Huang, Sabrina X; Xu, Zhiyan; Bryan, Jonathan E; Contractor, Amaya M; Korabelnikov, Tomer; Glass, Ian A; Doherty, Dan; Birth Defects Research Laboratory; Levine, Jon E; Sousa, André M M; Chang, Qiang; Bhattacharyya, Anita; Wang, Daifeng; Werling, Donna M; Zhao, Xinyu | December 20, 2023 | Not Determined |
37811875 | Create Study | Lineage specific 3D genome structure in the adult human brain and neurodevelopmental changes in the chromatin interactome. | Nucleic acids research | Rahman, Samir; Dong, Pengfei; Apontes, Pasha; Fernando, Michael B; Kosoy, Roman; Townsley, Kayla G; Girdhar, Kiran; Bendl, Jaroslav; Shao, Zhiping; Misir, Ruth; Tsankova, Nadia; Kleopoulos, Steven P; Brennand, Kristen J; Fullard, John F; Roussos, Panos | November 10, 2023 | Not Determined |
37777856 | Create Study | GWAS Meta-Analysis of Suicide Attempt: Identification of 12 Genome-Wide Significant Loci and Implication of Genetic Risks for Specific Health Factors. | The American journal of psychiatry | Docherty, Anna R; Mullins, Niamh; Ashley-Koch, Allison E; Qin, Xuejun; Coleman, Jonathan R I; Shabalin, Andrey; Kang, JooEun; Murnyak, Balasz; Wendt, Frank; Adams, Mark; Campos, Adrian I; DiBlasi, Emily; Fullerton, Janice M; Kranzler, Henry R; Bakian, Amanda V; Monson, Eric T; Rentería, Miguel E; Walss-Bass, Consuelo; Andreassen, Ole A; Behera, Chittaranjan; Bulik, Cynthia M; Edenberg, Howard J; Kessler, Ronald C; Mann, J John; Nurnberger Jr, John I; Pistis, Giorgio; Streit, Fabian; Ursano, Robert J; Polimanti, Renato; Dennis, Michelle; Garrett, Melanie; Hair, Lauren; Harvey, Philip; Hauser, Elizabeth R; Hauser, Michael A; Huffman, Jennifer; Jacobson, Daniel; Madduri, Ravi; McMahon, Benjamin; Oslin, David W; Trafton, Jodie; Awasthi, Swapnil; Berrettini, Wade H; Bohus, Martin; Chang, Xiao; Chen, Hsi-Chung; Chen, Wei J; Christensen, Erik D; Crow, Scott; Duriez, Philibert; Edwards, Alexis C; Fernández-Aranda, Fernando; Galfalvy, Hanga; Gandal, Michael; Gorwood, Philip; Guo, Yiran; Hafferty, Jonathan D; Hakonarson, Hakon; Halmi, Katherine A; Hishimoto, Akitoyo; Jain, Sonia; Jamain, Stéphane; Jiménez-Murcia, Susana; Johnson, Craig; Kaplan, Allan S; Kaye, Walter H; Keel, Pamela K; Kennedy, James L; Kim, Minsoo; Klump, Kelly L; Levey, Daniel F; Li, Dong; Liao, Shih-Cheng; Lieb, Klaus; Lilenfeld, Lisa; Marshall, Christian R; Mitchell, James E; Okazaki, Satoshi; Otsuka, Ikuo; Pinto, Dalila; Powers, Abigail; Ramoz, Nicolas; Ripke, Stephan; Roepke, Stefan; Rozanov, Vsevolod; Scherer, Stephen W; Schmahl, Christian; Sokolowski, Marcus; Starnawska, Anna; Strober, Michael; Su, Mei-Hsin; Thornton, Laura M; Treasure, Janet; Ware, Erin B; Watson, Hunna J; Witt, Stephanie H; Woodside, D Blake; Yilmaz, Zeynep; Zillich, Lea; Adolfsson, Rolf; Agartz, Ingrid; Alda, Martin; Alfredsson, Lars; Appadurai, Vivek; Artigas, María Soler; Van der Auwera, Sandra; Azevedo, M Helena; Bass, Nicholas; Bau, Claiton H D; Baune, Bernhard T; Bellivier, Frank; Berger, Klaus; Biernacka, Joanna M; Bigdeli, Tim B; Binder, Elisabeth B; Boehnke, Michael; Boks, Marco P; Braff, David L; Bryant, Richard; Budde, Monika; Byrne, Enda M; Cahn, Wiepke; Castelao, Enrique; Cervilla, Jorge A; Chaumette, Boris; Corvin, Aiden; Craddock, Nicholas; Djurovic, Srdjan; Foo, Jerome C; Forstner, Andreas J; Frye, Mark; Gatt, Justine M; Giegling, Ina; Grabe, Hans J; Green, Melissa J; Grevet, Eugenio H; Grigoroiu-Serbanescu, Maria; Gutierrez, Blanca; Guzman-Parra, Jose; Hamshere, Marian L; Hartmann, Annette M; Hauser, Joanna; Heilmann-Heimbach, Stefanie; Hoffmann, Per; Ising, Marcus; Jones, Ian; Jones, Lisa A; Jonsson, Lina; Kahn, René S; Kelsoe, John R; Kendler, Kenneth S; Kloiber, Stefan; Koenen, Karestan C; Kogevinas, Manolis; Krebs, Marie-Odile; Landén, Mikael; Leboyer, Marion; Lee, Phil H; Levinson, Douglas F; Liao, Calwing; Lissowska, Jolanta; Mayoral, Fermin; McElroy, Susan L; McGrath, Patrick; McGuffin, Peter; McQuillin, Andrew; Mehta, Divya; Melle, Ingrid; Mitchell, Philip B; Molina, Esther; Morken, Gunnar; Nievergelt, Caroline; Nöthen, Markus M; O'Donovan, Michael C; Ophoff, Roel A; Owen, Michael J; Pato, Carlos; Pato, Michele T; Penninx, Brenda W J H; Potash, James B; Power, Robert A; Preisig, Martin; Quested, Digby; Ramos-Quiroga, Josep Antoni; Reif, Andreas; Ribasés, Marta; Richarte, Vanesa; Rietschel, Marcella; Rivera, Margarita; Roberts, Andrea; Roberts, Gloria; Rouleau, Guy A; Rovaris, Diego L; Sanders, Alan R; Schofield, Peter R; Schulze, Thomas G; Scott, Laura J; Serretti, Alessandro; Shi, Jianxin; Sirignano, Lea; Sklar, Pamela; Smeland, Olav B; Smoller, Jordan W; Sonuga-Barke, Edmund (see original citation for additional authors) | October 1, 2023 | Not Determined |
37771758 | Create Study | Hypergraph factorization for multi-tissue gene expression imputation. | Nature machine intelligence | Viñas, Ramon; Joshi, Chaitanya K; Georgiev, Dobrik; Lin, Phillip; Dumitrascu, Bianca; Gamazon, Eric R; Liò, Pietro | July 1, 2023 | Not Determined |
37745891 | Create Study | Dimensional clinical phenotyping using post-mortem brain donor medical records: post-mortem RDoC profiling is associated with Alzheimer''s disease neuropathology. | Alzheimer''s & dementia (Amsterdam, Netherlands) | Vogelgsang, Jonathan; Dan, Shu; Lally, Anna P; Chatigny, Michael; Vempati, Sangeetha; Abston, Joshua; Durning, Peter T; Oakley, Derek H; McCoy, Thomas H; Klengel, Torsten; Berretta, Sabina | January 1, 2023 | Not Determined |
37745552 | Create Study | Systematic identification of disease-causing promoter and untranslated region variants in 8,040 undiagnosed individuals with rare disease. | medRxiv : the preprint server for health sciences | Martin-Geary, Alexandra C; Blakes, Alexander J M; Dawes, Ruebena; Findlay, Scott D; Lord, Jenny; Walker, Susan; Talbot-Martin, Jonathan; Wieder, Nechama; D'Souza, Elston N; Fernandes, Maria; Hilton, Sarah; Lahiri, Nayana; Campbell, Christopher; Jenkinson, Sarah; DeGoede, Christian G E L; Anderson, Emily R; Burge, Christopher B; Sanders, Stephan J; Ellingford, Jamie; Baralle, Diana; Banka, Siddharth; Whiffin, Nicola | September 12, 2023 | Not Determined |
37715107 | Create Study | Decreased CNNM2 expression in prefrontal cortex affects sensorimotor gating function, cognition, dendritic spine morphogenesis and risk of schizophrenia. | Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology | Zhou, Dan-Yang; Su, Xi; Wu, Yong; Yang, Yongfeng; Zhang, Luwen; Cheng, Shumin; Shao, Minglong; Li, Wenqiang; Zhang, Zhaohui; Wang, Lu; Lv, Luxian; Li, Ming; Song, Meng | January 1, 2024 | Not Determined |
37714849 | Create Study | Divergent single cell transcriptome and epigenome alterations in ALS and FTD patients with C9orf72 mutation. | Nature communications | Li, Junhao; Jaiswal, Manoj K; Chien, Jo-Fan; Kozlenkov, Alexey; Jung, Jinyoung; Zhou, Ping; Gardashli, Mahammad; Pregent, Luc J; Engelberg-Cook, Erica; Dickson, Dennis W; Belzil, Veronique V; Mukamel, Eran A; Dracheva, Stella | September 15, 2023 | Not Determined |
37714797 | Create Study | Neuropsychiatric biomarker discovery: go big or go home. | Trends in molecular medicine | Ljungdahl, Alicia; Sanders, Stephan J | November 1, 2023 | Not Determined |
37712493 | Create Study | Novel method of isolating nuclei of human oligodendrocyte precursor cells reveals substantial developmental changes in gene expression and H3K27ac histone modification. | Glia | Kozlenkov, Alexey; Vadukapuram, Ramu; Zhou, Ping; Fam, Peter; Wegner, Michael; Dracheva, Stella | January 1, 2024 | Not Determined |
37696874 | Create Study | A higher dysregulation burden of brain DNA methylation in female patients implicated in the sex bias of Schizophrenia. | Molecular psychiatry | Zhou, Jiaqi; Xia, Yan; Li, Miao; Chen, Yu; Dai, Jiacheng; Liu, Chunyu; Chen, Chao | November 1, 2023 | Not Determined |
37645832 | Create Study | Characterization of enhancer activity in early human neurodevelopment using Massively parallel reporter assay (MPRA) and forebrain organoids. | bioRxiv : the preprint server for biology | Capauto, Davide; Wang, Yifan; Wu, Feinan; Norton, Scott; Mariani, Jessica; Inoue, Fumitaka; Crawford, Gregory E; PsychENCODE Consortium; Ahituv, Nadav; Abyzov, Alexej; Vaccarino, Flora M | August 14, 2023 | Not Determined |
37620341 | Create Study | Human forebrain organoid-based multi-omics analyses of PCCB as a schizophrenia associated gene linked to GABAergic pathways. | Nature communications | Zhang, Wendiao; Zhang, Ming; Xu, Zhenhong; Yan, Hongye; Wang, Huimin; Jiang, Jiamei; Wan, Juan; Tang, Beisha; Liu, Chunyu; Chen, Chao; Meng, Qingtuan | August 24, 2023 | Not Determined |
37592024 | Create Study | Genetic insights into human cortical organization and development through genome-wide analyses of 2,347 neuroimaging phenotypes. | Nature genetics | Warrier, Varun; Stauffer, Eva-Maria; Huang, Qin Qin; Wigdor, Emilie M; Slob, Eric A W; Seidlitz, Jakob; Ronan, Lisa; Valk, Sofie L; Mallard, Travis T; Grotzinger, Andrew D; Romero-Garcia, Rafael; Baron-Cohen, Simon; Geschwind, Daniel H; Lancaster, Madeline A; Murray, Graham K; Gandal, Michael J; Alexander-Bloch, Aaron; Won, Hyejung; Martin, Hilary C; Bullmore, Edward T; Bethlehem, Richard A I | September 1, 2023 | Not Determined |
37580460 | Create Study | Unraveling the cell-type-specific molecular pathways of PTSD: integrating GWAS with brain genomic profiling and in vitro modeling. | Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology | Iatrou, Artemis; Daskalakis, Nikolaos P | January 1, 2024 | Not Determined |
37550530 | Create Study | Genome-wide analysis of a model-derived binge eating disorder phenotype identifies risk loci and implicates iron metabolism. | Nature genetics | Burstein, David; Griffen, Trevor C; Therrien, Karen; Bendl, Jaroslav; Venkatesh, Sanan; Dong, Pengfei; Modabbernia, Amirhossein; Zeng, Biao; Mathur, Deepika; Hoffman, Gabriel; Sysko, Robyn; Hildebrandt, Tom; Voloudakis, Georgios; Roussos, Panos | September 1, 2023 | Not Determined |
37546856 | Create Study | Dopaminoceptive D1 and D2 neurons in ventral hippocampus arbitrate approach and avoidance in anxiety. | bioRxiv : the preprint server for biology | Godino, Arthur; Salery, Marine; Minier-Toribio, Angelica M; Patel, Vishwendra; Fullard, John F; Parise, Eric M; Martinez-Rivera, Freddyson J; Morel, Carole; Roussos, Panos; Blitzer, Robert D; Nestler, Eric J | July 28, 2023 | Not Determined |
37546804 | Create Study | MicroRNA-Mediated Obstruction of Stem-loop Alternative Splicing (MIMOSAS): a global mechanism for the regulation of alternative splicing. | Research square | Zhai, Rong; Ruan, Kai; Perez, German Farinas; Kubat, Miroslav; Liu, Jiaqi; Hofacker, Ivo; Wuchty, Stefan | July 28, 2023 | Not Determined |
37515770 | Create Study | The stability of the myelinating oligodendrocyte transcriptome is regulated by the nuclear lamina. | Cell reports | Pruvost, Mathilde; Patzig, Julia; Yattah, Camila; Selcen, Ipek; Hernandez, Marylens; Park, Hye-Jin; Moyon, Sarah; Liu, Shibo; Morioka, Malia S; Shopland, Lindsay; Al-Dalahmah, Osama; Bendl, Jaroslav; Fullard, John F; Roussos, Panos; Goldman, James; He, Ye; Dupree, Jeffrey L; Casaccia, Patrizia | August 29, 2023 | Not Determined |
37503149 | Create Study | R-loop landscapes in the developing human brain are linked to neural differentiation and cell-type specific transcription. | bioRxiv : the preprint server for biology | LaMarca, Elizabeth A; Saito, Atsushi; Plaza-Jennings, Amara; Espeso-Gil, Sergio; Hellmich, Allyse; Fernando, Michael B; Javidfar, Behnam; Liao, Will; Estill, Molly; Townsley, Kayla; Florio, Anna; Ethridge, James E; Do, Catherine; Tycko, Benjamin; Shen, Li; Kamiya, Atsushi; Tsankova, Nadejda M; Brennand, Kristen J; Akbarian, Schahram | July 18, 2023 | Not Determined |
37502907 | Create Study | Schizophrenia Risk Mapping and Functional Engineering of the 3D Genome in Three Neuronal Subtypes. | bioRxiv : the preprint server for biology | Powell, Samuel K; Liao, Will; O'Shea, Callan; Kammourh, Sarah; Ghorbani, Sadaf; Rigat, Raymond; Elahi, Rahat; Deans, Pj Michael; Le, Derek J; Agarwal, Poonam; Seow, Wei Qiang; Wang, Kevin C; Akbarian, Schahram; Brennand, Kristen J | July 19, 2023 | Not Determined |
37491937 | Create Study | Single-Nucleus Transcriptome Profiling of Dorsolateral Prefrontal Cortex: Mechanistic Roles for Neuronal Gene Expression, Including the 17q21.31 Locus, in PTSD Stress Response. | The American journal of psychiatry | Chatzinakos, Chris; Pernia, Cameron D; Morrison, Filomene G; Iatrou, Artemis; McCullough, Kenneth M; Schuler, Heike; Snijders, Clara; Bajaj, Thomas; DiPietro, Christopher P; Soliva Estruch, Marina; Gassen, Nils C; Anastasopoulos, Constantin; Bharadwaj, Rahul A; Bowlby, Benjamin C; Hartmann, Jakob; Maihofer, Adam X; Nievergelt, Caroline M; Ressler, Nicholas M; Wolf, Erika J; Traumatic Stress Brain Research Group; PTSD BrainOmics Project of the PsychENCODE Consortium; PTSD Working Group of the Psychiatric Genomics Consortium; Carlezon Jr, William A; Krystal, John H; Kleinman, Joel E; Girgenti, Matthew J; Huber, Bertrand R; Kellis, Manolis; Logue, Mark W; Miller, Mark W; Ressler, Kerry J; Daskalakis, Nikolaos P | October 1, 2023 | Not Determined |
37464041 | Create Study | Depression pathophysiology, risk prediction of recurrence and comorbid psychiatric disorders using genome-wide analyses. | Nature medicine | Als, Thomas D; Kurki, Mitja I; Grove, Jakob; Voloudakis, Georgios; Therrien, Karen; Tasanko, Elisa; Nielsen, Trine Tollerup; Naamanka, Joonas; Veerapen, Kumar; Levey, Daniel F; Bendl, Jaroslav; Bybjerg-Grauholm, Jonas; Zeng, Biao; Demontis, Ditte; Rosengren, Anders; Athanasiadis, Georgios; Bækved-Hansen, Marie; Qvist, Per; Bragi Walters, G; Thorgeirsson, Thorgeir; Stefánsson, Hreinn; Musliner, Katherine L; Rajagopal, Veera M; Farajzadeh, Leila; Thirstrup, Janne; Vilhjálmsson, Bjarni J; McGrath, John J; Mattheisen, Manuel; Meier, Sandra; Agerbo, Esben; Stefánsson, Kári; Nordentoft, Merete; Werge, Thomas; Hougaard, David M; Mortensen, Preben B; Stein, Murray B; Gelernter, Joel; Hovatta, Iiris; Roussos, Panos; Daly, Mark J; Mors, Ole; Palotie, Aarno; Børglum, Anders D | July 1, 2023 | Not Determined |
37461605 | Create Study | Phylogenetic affiliations and genomic characterization of novel bacterial species and their abundance in the International Space Station. | Research square | Simpson, Anna C; Sengupta, Pratyay; Zhang, Flora; Hameed, Asif; Parker, Ceth W; Singh, Nitin K; Miliotis, Georgios; Rekha, Punchappady D; Raman, Karthik; Mason, Christopher E; Venkateswaran, Kasthuri | July 6, 2023 | Not Determined |
37454787 | Create Study | Activity-Dependent Transcriptional Program in NGN2+ Neurons Enriched for Genetic Risk for Brain-Related Disorders. | Biological psychiatry | Ma, Yixuan; Bendl, Jaroslav; Hartley, Brigham J; Fullard, John F; Abdelaal, Rawan; Ho, Seok-Man; Kosoy, Roman; Gochman, Peter; Rapoport, Judith; Hoffman, Gabriel E; Brennand, Kristen J; Roussos, Panos | January 15, 2024 | Not Determined |
37451263 | Create Study | Improvement of sensory deficits in fragile X mice by increasing cortical interneuron activity after the critical period. | Neuron | Kourdougli, Nazim; Suresh, Anand; Liu, Benjamin; Juarez, Pablo; Lin, Ashley; Chung, David T; Graven Sams, Anette; Gandal, Michael J; Martínez-Cerdeño, Verónica; Buonomano, Dean V; Hall, Benjamin J; Mombereau, Cédric; Portera-Cailliau, Carlos | September 20, 2023 | Not Determined |
37429865 | Create Study | nnSVG for the scalable identification of spatially variable genes using nearest-neighbor Gaussian processes. | Nature communications | Weber, Lukas M; Saha, Arkajyoti; Datta, Abhirup; Hansen, Kasper D; Hicks, Stephanie C | July 10, 2023 | Not Determined |
37425902 | Create Study | Cell type and condition specific functional annotation of schizophrenia associated non-coding genetic variants. | bioRxiv : the preprint server for biology | Rummel, Christine K; Gagliardi, Miriam; Herholt, Alexander; Ahmad, Ruhel; Murek, Vanessa; Weigert, Liesa; Hausruckinger, Anna; Maidl, Susanne; Jimenez-Barron, Laura; Trastulla, Lucia; Eder, Mathias; Rossner, Moritz; Ziller, Michael J | June 27, 2023 | Not Determined |
37398182 | Create Study | The broad impact of cell death genes on the human disease phenome. | medRxiv : the preprint server for health sciences | Rich, Abigail; Lin, Phillip; Gamazon, Eric; Zinkel, Sandra | June 12, 2023 | Not Determined |
37398170 | Create Study | Minimum entropy framework identifies a novel class of genomic functional elements and reveals regulatory mechanisms at human disease loci. | bioRxiv : the preprint server for biology | Betti, Michael J; Aldrich, Melinda C; Gamazon, Eric R | December 12, 2023 | Not Determined |
37398070 | Create Study | Genetic mechanisms for impaired synaptic plasticity in schizophrenia revealed by computational modelling. | bioRxiv : the preprint server for biology | Mäki-Marttunen, Tuomo; Blackwell, Kim T; Akkouh, Ibrahim; Shadrin, Alexey; Valstad, Mathias; Elvsåshagen, Tobjørn; Linne, Marja-Leena; Djurovic, Srdjan; Einevoll, Gaute T; Andreassen, Ole A | June 14, 2023 | Not Determined |
37396358 | Create Study | Comparative genomic analysis of Cohnella hashimotonis sp. nov. isolated from the International Space Station. | Frontiers in microbiology | Simpson, Anna C; Eedara, V V Ramprasad; Singh, Nitin K; Damle, Namita; Parker, Ceth W; Karouia, Fathi; Mason, Christopher E; Venkateswaran, Kasthuri | January 1, 2023 | Not Determined |
37366052 | Create Study | Pleiotropy of autism-associated chromatin regulators. | Development (Cambridge, England) | Lasser, Micaela; Sun, Nawei; Xu, Yuxiao; Wang, Sheng; Drake, Sam; Law, Karen; Gonzalez, Silvano; Wang, Belinda; Drury, Vanessa; Castillo, Octavio; Zaltsman, Yefim; Dea, Jeanselle; Bader, Ethel; McCluskey, Kate E; State, Matthew W; Willsey, A Jeremy; Willsey, Helen Rankin | July 15, 2023 | Not Determined |
37365192 | Create Study | Elevated levels of FMRP-target MAP1B impair human and mouse neuronal development and mouse social behaviors via autophagy pathway. | Nature communications | Guo, Yu; Shen, Minjie; Dong, Qiping; Méndez-Albelo, Natasha M; Huang, Sabrina X; Sirois, Carissa L; Le, Jonathan; Li, Meng; Jarzembowski, Ezra D; Schoeller, Keegan A; Stockton, Michael E; Horner, Vanessa L; Sousa, André M M; Gao, Yu; Birth Defects Research Laboratory; Levine, Jon E; Wang, Daifeng; Chang, Qiang; Zhao, Xinyu | June 26, 2023 | Not Determined |
37270547 | Create Study | Balanced SET levels favor the correct enhancer repertoire during cell fate acquisition. | Nature communications | Zaghi, Mattia; Banfi, Federica; Massimino, Luca; Volpin, Monica; Bellini, Edoardo; Brusco, Simone; Merelli, Ivan; Barone, Cristiana; Bruni, Michela; Bossini, Linda; Lamparelli, Luigi Antonio; Pintado, Laura; D'Aliberti, Deborah; Spinelli, Silvia; Mologni, Luca; Colasante, Gaia; Ungaro, Federica; Cioni, Jean-Michel; Azzoni, Emanuele; Piazza, Rocco; Montini, Eugenio; Broccoli, Vania; Sessa, Alessandro | June 3, 2023 | Not Determined |
37214898 | Create Study | Distinct genetic liability profiles define clinically relevant patient strata across common diseases. | medRxiv : the preprint server for health sciences | Trastulla, Lucia; Moser, Sylvain; Jiménez-Barrón, Laura T; Andlauer, Till F M; von Scheidt, Moritz; Schizophrenia Working Group of the Psychiatric Genomics Consortium; Budde, Monika; Heilbronner, Urs; Papiol, Sergi; Teumer, Alexander; Homuth, Georg; Falkai, Peter; Völzke, Henry; Dörr, Marcus; Schulze, Thomas G; Gagneur, Julien; Iorio, Francesco; Müller-Myhsok, Bertram; Schunkert, Heribert; Ziller, Michael J | May 11, 2023 | Not Determined |
37205403 | Create Study | Collection of Biospecimens from the Inspiration4 Mission Establishes the Standards for the Space Omics and Medical Atlas (SOMA). | bioRxiv : the preprint server for biology | Overbey, Eliah G; Ryon, Krista; Kim, JangKeun; Tierney, Braden; Klotz, Remi; Ortiz, Veronica; Mullane, Sean; Schmidt, Julian C; MacKay, Matthew; Damle, Namita; Najjar, Deena; Matei, Irina; Patras, Laura; Medina, J Sebastian Garcia; Kleinman, Ashley; Hirschberg, Jeremy Wain; Proszynski, Jacqueline; Narayanan, S Anand; Schmidt, Caleb M; Afshin, Evan E; Innes, Lucinda; Saldarriaga, Mateo Mejia; Schmidt, Michael A; Granstein, Richard D; Shirah, Bader; Yu, Min; Lyden, David; Mateus, Jaime; Mason, Christopher E | May 2, 2023 | Not Determined |
37205394 | Create Study | ZBTB7A regulates MDD-specific chromatin signatures and astrocyte-mediated stress vulnerability in orbitofrontal cortex. | bioRxiv : the preprint server for biology | Fulton, Sasha L; Bendl, Jaroslav; Gameiro-Ros, Isabel; Fullard, John F; Al-Kachak, Amni; Lepack, Ashley E; Stewart, Andrew F; Singh, Sumnima; Poller, Wolfram C; Bastle, Ryan M; Hauberg, Mads E; Fakira, Amanda K; Chen, Min; Cuttoli, Romain Durand-de; Cathomas, Flurin; Ramakrishnan, Aarthi; Gleason, Kelly; Shen, Li; Tamminga, Carol A; Milosevic, Ana; Russo, Scott J; Swirski, Filip; Blitzer, Robert D; Slesinger, Paul A; Roussos, Panos; Maze, Ian | May 4, 2023 | Not Determined |
37197740 | Create Study | Gradient-based sparse principal component analysis with extensions to online learning. | Biometrika | Qiu, Yixuan; Lei, Jing; Roeder, Kathryn | June 1, 2023 | Not Determined |
37188697 | Create Study | Prioritization of potential causative genes for schizophrenia in placenta. | Nature communications | Ursini, Gianluca; Di Carlo, Pasquale; Mukherjee, Sreya; Chen, Qiang; Han, Shizhong; Kim, Jiyoung; Deyssenroth, Maya; Marsit, Carmen J; Chen, Jia; Hao, Ke; Punzi, Giovanna; Weinberger, Daniel R | May 15, 2023 | Not Determined |
37104612 | Create Study | Leveraging base-pair mammalian constraint to understand genetic variation and human disease. | Science (New York, N.Y.) | Sullivan, Patrick F; Meadows, Jennifer R S; Gazal, Steven; Phan, BaDoi N; Li, Xue; Genereux, Diane P; Dong, Michael X; Bianchi, Matteo; Andrews, Gregory; Sakthikumar, Sharadha; Nordin, Jessika; Roy, Ananya; Christmas, Matthew J; Marinescu, Voichita D; Wang, Chao; Wallerman, Ola; Xue, James; Yao, Shuyang; Sun, Quan; Szatkiewicz, Jin; Wen, Jia; Huckins, Laura M; Lawler, Alyssa; Keough, Kathleen C; Zheng, Zhili; Zeng, Jian; Wray, Naomi R; Li, Yun; Johnson, Jessica; Chen, Jiawen; Zoonomia Consortium§; Paten, Benedict; Reilly, Steven K; Hughes, Graham M; Weng, Zhiping; Pollard, Katherine S; Pfenning, Andreas R; Forsberg-Nilsson, Karin; Karlsson, Elinor K; Lindblad-Toh, Kerstin | April 28, 2023 | Not Determined |
37104607 | Create Study | Three-dimensional genome rewiring in loci with human accelerated regions. | Science (New York, N.Y.) | Keough, Kathleen C; Whalen, Sean; Inoue, Fumitaka; Przytycki, Pawel F; Fair, Tyler; Deng, Chengyu; Steyert, Marilyn; Ryu, Hane; Lindblad-Toh, Kerstin; Karlsson, Elinor; Zoonomia Consortium§; Nowakowski, Tomasz; Ahituv, Nadav; Pollen, Alex; Pollard, Katherine S | April 28, 2023 | Not Determined |
37090548 | Create Study | Genetic regulation of cell-type specific chromatin accessibility shapes the etiology of brain diseases. | bioRxiv : the preprint server for biology | Zeng, Biao; Bendl, Jaroslav; Deng, Chengyu; Lee, Donghoon; Misir, Ruth; Reach, Sarah M; Kleopoulos, Steven P; Auluck, Pavan; Marenco, Stefano; Lewis, David A; Haroutunian, Vahram; Ahituv, Nadav; Fullard, John F; Hoffman, Gabriel E; Roussos, Panos | March 2, 2023 | Not Determined |
37034773 | Create Study | Human forebrain organoids-based multi-omics analyses reveal PCCB''s regulation on GABAergic system contributing to schizophrenia. | Research square | Zhang, Wendiao; Zhang, Ming; Xu, Zhenhong; Yan, Hongye; Wang, Huimin; Jiang, Jiamei; Wan, Juan; Tang, Beisha; Liu, Chunyu; Chen, Chao; Meng, Qingtuan | March 29, 2023 | Not Determined |
37034704 | Create Study | Multiplex, single-cell CRISPRa screening for cell type specific regulatory elements. | bioRxiv : the preprint server for biology | Chardon, Florence M; McDiarmid, Troy A; Page, Nicholas F; Daza, Riza M; Martin, Beth; Domcke, Silvia; Regalado, Samuel G; Lalanne, Jean-Benoît; Calderon, Diego; Li, Xiaoyi; Starita, Lea M; Sanders, Stephan J; Ahituv, Nadav; Shendure, Jay | April 30, 2024 | Not Determined |
36993743 | Create Study | Evaluating performance and applications of sample-wise cell deconvolution methods on human brain transcriptomic data. | bioRxiv : the preprint server for biology | Dai, Rujia; Chu, Tianyao; Zhang, Ming; Wang, Xuan; Jourdon, Alexandre; Wu, Feinan; Mariani, Jessica; Vaccarino, Flora M; Lee, Donghoon; Fullard, John F; Hoffman, Gabriel E; Roussos, Panos; Wang, Yue; Wang, Xusheng; Pinto, Dalila; Wang, Sidney H; Zhang, Chunling; PsychENCODE consortium; Chen, Chao; Liu, Chunyu | March 15, 2023 | Not Determined |
36993732 | Create Study | escheR: Unified multi-dimensional visualizations with Gestalt principles. | bioRxiv : the preprint server for biology | Guo, Boyi; Huuki-Myers, Louise A; Grant-Peters, Melissa; Collado-Torres, Leonardo; Hicks, Stephanie C | June 8, 2023 | Not Determined |
36993726 | Create Study | Developmental isoform diversity in the human neocortex informs neuropsychiatric risk mechanisms. | bioRxiv : the preprint server for biology | Patowary, Ashok; Zhang, Pan; Jops, Connor; Vuong, Celine K; Ge, Xinzhu; Hou, Kangcheng; Kim, Minsoo; Gong, Naihua; Margolis, Michael; Vo, Daniel; Wang, Xusheng; Liu, Chunyu; Pasaniuc, Bogdan; Li, Jingyi Jessica; Gandal, Michael J; de la Torre-Ubieta, Luis | October 11, 2023 | Not Determined |
36993467 | Create Study | A Transcriptomic Atlas of the Human Brain Reveals Genetically Determined Aspects of Neuropsychiatric Health. | medRxiv : the preprint server for health sciences | Bledsoe, Xavier; Gamazon, Eric R | June 4, 2023 | Not Determined |
36991491 | Create Study | Holobiont Urbanism: sampling urban beehives reveals cities'' metagenomes. | Environmental microbiome | Hénaff, Elizabeth; Najjar, Devora; Perez, Miguel; Flores, Regina; Woebken, Christopher; Mason, Christopher E; Slavin, Kevin | March 30, 2023 | Not Determined |
36945630 | Create Study | Cross-ancestry, cell-type-informed atlas of gene, isoform, and splicing regulation in the developing human brain. | medRxiv : the preprint server for health sciences | Wen, Cindy; Margolis, Michael; Dai, Rujia; Zhang, Pan; Przytycki, Pawel F; Vo, Daniel D; Bhattacharya, Arjun; Matoba, Nana; Jiao, Chuan; Kim, Minsoo; Tsai, Ellen; Hoh, Celine; Aygün, Nil; Walker, Rebecca L; Chatzinakos, Christos; Clarke, Declan; Pratt, Henry; Consortium, PsychENCODE; Peters, Mette A; Gerstein, Mark; Daskalakis, Nikolaos P; Weng, Zhiping; Jaffe, Andrew E; Kleinman, Joel E; Hyde, Thomas M; Weinberger, Daniel R; Bray, Nicholas J; Sestan, Nenad; Geschwind, Daniel H; Roeder, Kathryn; Gusev, Alexander; Pasaniuc, Bogdan; Stein, Jason L; Love, Michael I; Pollard, Katherine S; Liu, Chunyu; Gandal, Michael J | March 6, 2023 | Not Determined |
36945512 | Create Study | Leveraging Base Pair Mammalian Constraint to Understand Genetic Variation and Human Disease. | bioRxiv : the preprint server for biology | Sullivan, Patrick F; Meadows, Jennifer R S; Gazal, Steven; Phan, BaDoi N; Li, Xue; Genereux, Diane P; Dong, Michael X; Bianchi, Matteo; Andrews, Gregory; Sakthikumar, Sharadha; Nordin, Jessika; Roy, Ananya; Christmas, Matthew J; Marinescu, Voichita D; Wallerman, Ola; Xue, James R; Li, Yun; Yao, Shuyang; Sun, Quan; Szatkiewicz, Jin; Wen, Jia; Huckins, Laura M; Lawler, Alyssa J; Keough, Kathleen C; Zheng, Zhili; Zeng, Jian; Wray, Naomi R; Johnson, Jessica; Chen, Jiawen; Zoonomia Consortium; Paten, Benedict; Reilly, Steven K; Hughes, Graham M; Weng, Zhiping; Pollard, Katherine S; Pfenning, Andreas R; Forsberg-Nilsson, Karin; Karlsson, Elinor K; Lindblad-Toh, Kerstin | March 10, 2023 | Not Determined |
36936070 | Create Study | BOMA, a machine-learning framework for comparative gene expression analysis across brains and organoids. | Cell reports methods | He, Chenfeng; Kalafut, Noah Cohen; Sandoval, Soraya O; Risgaard, Ryan; Sirois, Carissa L; Yang, Chen; Khullar, Saniya; Suzuki, Marin; Huang, Xiang; Chang, Qiang; Zhao, Xinyu; Sousa, Andre M M; Wang, Daifeng | February 27, 2023 | Not Determined |
36932057 | Create Study | Antipsychotic drug use complicates assessment of gene expression changes associated with schizophrenia. | Translational psychiatry | Schulmann, Anton; Marenco, Stefano; Vawter, Marquis P; Akula, Nirmala; Limon, Agenor; Mandal, Ajeet; Auluck, Pavan K; Patel, Yash; Lipska, Barbara K; McMahon, Francis J | March 17, 2023 | Not Determined |
36882872 | Create Study | Multi-ancestry phenome-wide association of complement component 4 variation with psychiatric and brain phenotypes in youth. | Genome biology | Hernandez, Leanna M; Kim, Minsoo; Zhang, Pan; Bethlehem, Richard A I; Hoftman, Gil; Loughnan, Robert; Smith, Diana; Bookheimer, Susan Y; Fan, Chun Chieh; Bearden, Carrie E; Thompson, Wesley K; Gandal, Michael J | March 7, 2023 | Not Determined |
36873728 | Create Study | Genetics and epigenetics of stress: New avenues for an old concept. | Neurobiology of stress | Soliva-Estruch, Marina; Tamashiro, Kellie L; Daskalakis, Nikolaos P | March 1, 2023 | Not Determined |
36862688 | Create Study | Neuron-specific transcriptomic signatures indicate neuroinflammation and altered neuronal activity in ASD temporal cortex. | Proceedings of the National Academy of Sciences of the United States of America | Zhang, Pan; Omanska, Alicja; Ander, Bradley P; Gandal, Michael J; Stamova, Boryana; Schumann, Cynthia M | March 7, 2023 | Not Determined |
36857101 | Create Study | No Increased Detection of Nucleic Acids of CNS-related Viruses in the Brains of Patients with Schizophrenia, Bipolar Disorder, and Autism Spectrum Disorder. | Schizophrenia bulletin | Min, Shishi; Gandal, Michael J; Kopp, Richard F; Liu, Chunyu; Chen, Chao | May 3, 2023 | Not Determined |
36834916 | Create Study | Characterization of De Novo Promoter Variants in Autism Spectrum Disorder with Massively Parallel Reporter Assays. | International journal of molecular sciences | Koesterich, Justin; An, Joon-Yong; Inoue, Fumitaka; Sohota, Ajuni; Ahituv, Nadav; Sanders, Stephan J; Kreimer, Anat | February 9, 2023 | Not Determined |
36824961 | Create Study | Integrated single cell and unsupervised spatial transcriptomic analysis defines molecular anatomy of the human dorsolateral prefrontal cortex. | bioRxiv : the preprint server for biology | Huuki-Myers, Louise; Spangler, Abby; Eagles, Nick; Montgomery, Kelsey D; Kwon, Sang Ho; Guo, Boyi; Grant-Peters, Melissa; Divecha, Heena R; Tippani, Madhavi; Sriworarat, Chaichontat; Nguyen, Annie B; Ravichandran, Prashanthi; Tran, Matthew N; Seyedian, Arta; PsychENCODE consortium; Hyde, Thomas M; Kleinman, Joel E; Battle, Alexis; Page, Stephanie C; Ryten, Mina; Hicks, Stephanie C; Martinowich, Keri; Collado-Torres, Leonardo; Maynard, Kristen R | February 15, 2023 | Not Determined |
36824845 | Create Study | Massively parallel characterization of psychiatric disorder-associated and cell-type-specific regulatory elements in the developing human cortex. | bioRxiv : the preprint server for biology | Deng, Chengyu; Whalen, Sean; Steyert, Marilyn; Ziffra, Ryan; Przytycki, Pawel F; Inoue, Fumitaka; Pereira, Daniela A; Capauto, Davide; Norton, Scott; Vaccarino, Flora M; Pollen, Alex; Nowakowski, Tomasz J; Ahituv, Nadav; Pollard, Katherine S | February 16, 2023 | Not Determined |
36798347 | Create Study | More than a Feeling: Dermatological Changes Impacted by Spaceflight. | Research square | Cope, Henry; Elsborg, Jonas; Demharter, Samuel; Mcdonald, J Tyson; Wernecke, Chiara; Parthasarathy, Hari; Unadkat, Hriday; Chatrathi, Mira; Claudio, Jennifer; Reinsch, Sigrid; Zwart, Sara; Smith, Scott; Heer, Martina; Muratani, Masafumi; Meydan, Cem; Overbey, Eliah; Kim, JangKeun; Park, Jiwoon; Schisler, Jonathan; Mason, Christopher; Szewczyk, Nathaniel; Willis, Craig; Salam, Amr; Beheshti, Afshin | February 10, 2023 | Not Determined |
36790927 | Create Study | Genomic profiling of HIV-1 integration in microglia cells links viral integration to the topologically associated domains. | Cell reports | Rheinberger, Mona; Costa, Ana Luisa; Kampmann, Martin; Glavas, Dunja; Shytaj, Iart Luca; Sreeram, Sheetal; Penzo, Carlotta; Tibroni, Nadine; Garcia-Mesa, Yoelvis; Leskov, Konstantin; Fackler, Oliver T; Vlahovicek, Kristian; Karn, Jonathan; Lucic, Bojana; Herrmann, Carl; Lusic, Marina | February 28, 2023 | Not Determined |
36778507 | Create Study | A Higher Dysregulation Burden of Brain DNA Methylation in Female Patients Implicated in the Sex Bias of Schizophrenia. | Research square | Chen, Chao; Zhou, Jiaqi; Xia, Yan; Li, Miao; Chen, Yu; Dai, Jiacheng; Liu, Chunyu | January 30, 2023 | Not Determined |
36747726 | Create Study | Performant web-based interactive visualization tool for spatially-resolved transcriptomics experiments. | bioRxiv : the preprint server for biology | Sriworarat, Chaichontat; Nguyen, Annie; Eagles, Nicholas J; Collado-Torres, Leonardo; Martinowich, Keri; Maynard, Kristen R; Hicks, Stephanie C | February 23, 2023 | Not Determined |
36711948 | Create Study | Detecting and Adjusting for Hidden Biases due to Phenotype Misclassification in Genome-Wide Association Studies. | medRxiv : the preprint server for health sciences | Burstein, David; Hoffman, Gabriel; Mathur, Deepika; Venkatesh, Sanan; Therrien, Karen; Fanous, Ayman H; Bigdeli, Tim B; Harvey, Philip D; Roussos, Panos; Voloudakis, Georgios | January 18, 2023 | Not Determined |
36711601 | Create Study | pTDP-43 levels correlate with cell type specific molecular alterations in the prefrontal cortex of C9orf72 ALS/FTD patients. | bioRxiv : the preprint server for biology | Wang, Hsiao-Lin V; Xiang, Jian-Feng; Yuan, Chenyang; Veire, Austin M; Gendron, Tania F; Murray, Melissa E; Tansey, Malú G; Hu, Jian; Gearing, Marla; Glass, Jonathan D; Jin, Peng; Corces, Victor G; McEachin, Zachary T | June 13, 2024 | Not Determined |
36702997 | Create Study | Genome-wide analyses of ADHD identify 27 risk loci, refine the genetic architecture and implicate several cognitive domains. | Nature genetics | Demontis, Ditte; Walters, G Bragi; Athanasiadis, Georgios; Walters, Raymond; Therrien, Karen; Nielsen, Trine Tollerup; Farajzadeh, Leila; Voloudakis, Georgios; Bendl, Jaroslav; Zeng, Biau; Zhang, Wen; Grove, Jakob; Als, Thomas D; Duan, Jinjie; Satterstrom, F Kyle; Bybjerg-Grauholm, Jonas; Bækved-Hansen, Marie; Gudmundsson, Olafur O; Magnusson, Sigurdur H; Baldursson, Gisli; Davidsdottir, Katrin; Haraldsdottir, Gyda S; Agerbo, Esben; Hoffman, Gabriel E; Dalsgaard, Søren; Martin, Joanna; Ribasés, Marta; Boomsma, Dorret I; Soler Artigas, Maria; Roth Mota, Nina; Howrigan, Daniel; Medland, Sarah E; Zayats, Tetyana; Rajagopal, Veera M; ADHD Working Group of the Psychiatric Genomics Consortium; iPSYCH-Broad Consortium; Nordentoft, Merete; Mors, Ole; Hougaard, David M; Mortensen, Preben Bo; Daly, Mark J; Faraone, Stephen V; Stefansson, Hreinn; Roussos, Panos; Franke, Barbara; Werge, Thomas; Neale, Benjamin M; Stefansson, Kari; Børglum, Anders D | February 1, 2023 | Not Determined |
36672826 | Create Study | Ozone Disinfection for Elimination of Bacteria and Degradation of SARS-CoV2 RNA for Medical Environments. | Genes | Westover, Craig; Rahmatulloev, Savlatjon; Danko, David; Afshin, Evan E; O'Hara, Niamh B; Ounit, Rachid; Bezdan, Daniela; Mason, Christopher E | December 28, 2022 | Not Determined |
36652379 | Create Study | The relationship between case-control differential gene expression from brain tissue and genetic associations in schizophrenia. | American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics | Clifton, Nicholas E; Schulmann, Anton; Schizophrenia Working Group of the Psychiatric Genomics Consortium; Holmans, Peter A; O'Donovan, Michael C; Vawter, Marquis P | January 1, 2023 | Not Determined |
36648426 | Create Study | Predicting brain-regional gene regulatory networks from multi-omics for Alzheimer''s disease phenotypes and Covid-19 severity. | Human molecular genetics | Khullar, Saniya; Wang, Daifeng | May 18, 2023 | Not Determined |
36640767 | Create Study | Machine learning dissection of human accelerated regions in primate neurodevelopment. | Neuron | Whalen, Sean; Inoue, Fumitaka; Ryu, Hane; Fair, Tyler; Markenscoff-Papadimitriou, Eirene; Keough, Kathleen; Kircher, Martin; Martin, Beth; Alvarado, Beatriz; Elor, Orry; Laboy Cintron, Dianne; Williams, Alex; Hassan Samee, Md Abul; Thomas, Sean; Krencik, Robert; Ullian, Erik M; Kriegstein, Arnold; Rubenstein, John L; Shendure, Jay; Pollen, Alex A; Ahituv, Nadav; Pollard, Katherine S | March 15, 2023 | Not Determined |
36624241 | Create Study | Genome-wide association study of school grades identifies genetic overlap between language ability, psychopathology and creativity. | Scientific reports | Rajagopal, Veera M; Ganna, Andrea; Coleman, Jonathan R I; Allegrini, Andrea; Voloudakis, Georgios; Grove, Jakob; Als, Thomas D; Horsdal, Henriette T; Petersen, Liselotte; Appadurai, Vivek; Schork, Andrew; Buil, Alfonso; Bulik, Cynthia M; Bybjerg-Grauholm, Jonas; Bækvad-Hansen, Marie; Hougaard, David M; Mors, Ole; Nordentoft, Merete; Werge, Thomas; iPSYCH-Broad Consortium; Mortensen, Preben Bo; Breen, Gerome; Roussos, Panos; Plomin, Robert; Agerbo, Esben; Børglum, Anders D; Demontis, Ditte | January 9, 2023 | Not Determined |
36514162 | Create Study | Spatial omics technologies at multimodal and single cell/subcellular level. | Genome biology | Park, Jiwoon; Kim, Junbum; Lewy, Tyler; Rice, Charles M; Elemento, Olivier; Rendeiro, André F; Mason, Christopher E | December 13, 2022 | Not Determined |
36504281 | Create Study | The genetic regulation of protein expression in cerebrospinal fluid. | EMBO molecular medicine | Hansson, Oskar; Kumar, Atul; Janelidze, Shorena; Stomrud, Erik; Insel, Philip S; Blennow, Kaj; Zetterberg, Henrik; Fauman, Eric; Hedman, Åsa K; Nagle, Michael W; Whelan, Christopher D; Baird, Denis; Mälarstig, Anders; Mattsson-Carlgren, Niklas | January 11, 2023 | Not Determined |
36495218 | Create Study | GeneticsMakie.jl: a versatile and scalable toolkit for visualizing locus-level genetic and genomic data. | Bioinformatics (Oxford, England) | Kim, Minsoo; Vo, Daniel D; Kumagai, Michi E; Jops, Connor T; Gandal, Michael J | January 1, 2023 | Not Determined |
36477833 | Create Study | Insights from incorporating quantum computing into drug design workflows. | Bioinformatics (Oxford, England) | Lau, Bayo; Emani, Prashant S; Chapman, Jackson; Yao, Lijing; Lam, Tarsus; Merrill, Paul; Warrell, Jonathan; Gerstein, Mark B; Lam, Hugo Y K | January 1, 2023 | Not Determined |
36474001 | Create Study | Microglia-containing human brain organoids for the study of brain development and pathology. | Molecular psychiatry | Zhang, Wendiao; Jiang, Jiamei; Xu, Zhenhong; Yan, Hongye; Tang, Beisha; Liu, Chunyu; Chen, Chao; Meng, Qingtuan | January 1, 2023 | Not Determined |
36424644 | Create Study | Illuminating links between cis-regulators and trans-acting variants in the human prefrontal cortex. | Genome medicine | Liu, Shuang; Won, Hyejung; Clarke, Declan; Matoba, Nana; Khullar, Saniya; Mu, Yudi; Wang, Daifeng; Gerstein, Mark | November 24, 2022 | Not Determined |
36424395 | Create Study | Neuroimmune transcriptome changes in patient brains of psychiatric and neurological disorders. | Molecular psychiatry | Chen, Yu; Dai, Jiacheng; Tang, Longfei; Mikhailova, Tatiana; Liang, Qiuman; Li, Miao; Zhou, Jiaqi; Kopp, Richard F; Weickert, Cynthia; Chen, Chao; Liu, Chunyu | February 1, 2023 | Not Determined |
36413071 | Create Study | IMMerge: merging imputation data at scale. | Bioinformatics (Oxford, England) | Zhu, Wanying; Chen, Hung-Hsin; Petty, Alexander S; Petty, Lauren E; Polikowsky, Hannah G; Gamazon, Eric R; Below, Jennifer E; Highland, Heather M | January 1, 2023 | Not Determined |
36386965 | Create Study | Differential H3K9me2 heterochromatin levels and concordant mRNA expression in postmortem brain tissue of individuals with schizophrenia, bipolar, and controls. | Frontiers in psychiatry | Rizavi, Hooriyah S; Chase, Kayla A; Liu, Chunyu; Gavin, Hannah; Rosen, Cherise; Xia, Cuihua; Guidotti, Alessandro; Sharma, Rajiv P | January 1, 2022 | Not Determined |
36380236 | Create Study | Rare tandem repeat expansions associate with genes involved in synaptic and neuronal signaling functions in schizophrenia. | Molecular psychiatry | Wen, Jia; Trost, Brett; Engchuan, Worrawat; Halvorsen, Matthew; Pallotto, Linda M; Mitina, Aleksandra; Ancalade, NaEshia; Farrell, Martilias; Backstrom, Ian; Guo, Keyi; Pellecchia, Giovanna; Thiruvahindrapuram, Bhooma; Giusti-Rodriguez, Paola; Rosen, Jonathan David; Li, Yun; Won, Hyejung; Magnusson, Patrik K E; Gyllensten, Ulf; Bassett, Anne S; Hultman, Christina M; Sullivan, Patrick F; Yuen, Ryan K C; Szatkiewicz, Jin P | January 1, 2023 | Not Determined |
36370000 | Create Study | GALC variants affect galactosylceramidase enzymatic activity and risk of Parkinson''s disease. | Brain : a journal of neurology | Senkevich, Konstantin; Zorca, Cornelia E; Dworkind, Aliza; Rudakou, Uladzislau; Somerville, Emma; Yu, Eric; Ermolaev, Alexey; Nikanorova, Daria; Ahmad, Jamil; Ruskey, Jennifer A; Asayesh, Farnaz; Spiegelman, Dan; Fahn, Stanley; Waters, Cheryl; Monchi, Oury; Dauvilliers, Yves; Dupré, Nicolas; Greenbaum, Lior; Hassin-Baer, Sharon; Grenn, Francis P; Chiang, Ming Sum Ruby; Sardi, S Pablo; Vanderperre, Benoît; Blauwendraat, Cornelis; Trempe, Jean-François; Fon, Edward A; Durcan, Thomas M; Alcalay, Roy N; Gan-Or, Ziv | May 2, 2023 | Not Determined |
36341024 | Create Study | Best practices for multi-ancestry, meta-analytic transcriptome-wide association studies: Lessons from the Global Biobank Meta-analysis Initiative. | Cell genomics | Bhattacharya, Arjun; Hirbo, Jibril B; Zhou, Dan; Zhou, Wei; Zheng, Jie; Kanai, Masahiro; Global Biobank Meta-analysis Initiative; Pasaniuc, Bogdan; Gamazon, Eric R; Cox, Nancy J | October 12, 2022 | Not Determined |
36323788 | Create Study | Broad transcriptomic dysregulation occurs across the cerebral cortex in ASD. | Nature | Gandal, Michael J; Haney, Jillian R; Wamsley, Brie; Yap, Chloe X; Parhami, Sepideh; Emani, Prashant S; Chang, Nathan; Chen, George T; Hoftman, Gil D; de Alba, Diego; Ramaswami, Gokul; Hartl, Christopher L; Bhattacharya, Arjun; Luo, Chongyuan; Jin, Ting; Wang, Daifeng; Kawaguchi, Riki; Quintero, Diana; Ou, Jing; Wu, Ye Emily; Parikshak, Neelroop N; Swarup, Vivek; Belgard, T Grant; Gerstein, Mark; Pasaniuc, Bogdan; Geschwind, Daniel H | November 1, 2022 | Not Determined |
36323256 | Create Study | Spatiotemporal and genetic regulation of A-to-I editing throughout human brain development. | Cell reports | Cuddleston, Winston H; Fan, Xuanjia; Sloofman, Laura; Liang, Lindsay; Mossotto, Enrico; Moore, Kendall; Zipkowitz, Sarah; Wang, Minghui; Zhang, Bin; Wang, Jiebiao; Sestan, Nenad; Devlin, Bernie; Roeder, Kathryn; Sanders, Stephan J; Buxbaum, Joseph D; Breen, Michael S | November 1, 2022 | Not Determined |
36289406 | Create Study | Annotating genetic variants to target genes using H-MAGMA. | Nature protocols | Sey, Nancy Y A; Pratt, Brandon M; Won, Hyejung | January 1, 2023 | Not Determined |
36264161 | Create Study | An Aged/Autoimmune B-cell Program Defines the Early Transformation of Extranodal Lymphomas. | Cancer discovery | Venturutti, Leandro; Rivas, Martin A; Pelzer, Benedikt W; Flümann, Ruth; Hansen, Julia; Karagiannidis, Ioannis; Xia, Min; McNally, Dylan R; Isshiki, Yusuke; Lytle, Andrew; Teater, Matt; Chin, Christopher R; Meydan, Cem; Knittel, Gero; Ricker, Edd; Mason, Christopher E; Ye, Xiaofei; Pan-Hammarström, Qiang; Steidl, Christian; Scott, David W; Reinhardt, Hans Christian; Pernis, Alessandra B; Béguelin, Wendy; Melnick, Ari M | January 9, 2023 | Not Determined |
36183905 | Create Study | Challenges and opportunities for precision medicine in neurodevelopmental disorders. | Advanced drug delivery reviews | Chen, George T; Geschwind, Daniel H | December 1, 2022 | Not Determined |
36179695 | Create Study | TGFβ superfamily signaling regulates the state of human stem cell pluripotency and capacity to create well-structured telencephalic organoids. | Stem cell reports | Watanabe, Momoko; Buth, Jessie E; Haney, Jillian R; Vishlaghi, Neda; Turcios, Felix; Elahi, Lubayna S; Gu, Wen; Pearson, Caroline A; Kurdian, Arinnae; Baliaouri, Natella V; Collier, Amanda J; Miranda, Osvaldo A; Dunn, Natassia; Chen, Di; Sabri, Shan; Torre-Ubieta, Luis de la; Clark, Amander T; Plath, Kathrin; Christofk, Heather R; Kornblum, Harley I; Gandal, Michael J; Novitch, Bennett G | October 11, 2022 | Not Determined |
36163279 | Create Study | Population-level variation in enhancer expression identifies disease mechanisms in the human brain. | Nature genetics | Dong, Pengfei; Hoffman, Gabriel E; Apontes, Pasha; Bendl, Jaroslav; Rahman, Samir; Fernando, Michael B; Zeng, Biao; Vicari, James M; Zhang, Wen; Girdhar, Kiran; Townsley, Kayla G; Misir, Ruth; CommonMind Consortium; Brennand, Kristen J; Haroutunian, Vahram; Voloudakis, Georgios; Fullard, John F; Roussos, Panos | October 1, 2022 | Not Determined |
36163277 | Create Study | Identification of shared and differentiating genetic architecture for autism spectrum disorder, attention-deficit hyperactivity disorder and case subgroups. | Nature genetics | Mattheisen, Manuel; Grove, Jakob; Als, Thomas D; Martin, Joanna; Voloudakis, Georgios; Meier, Sandra; Demontis, Ditte; Bendl, Jaroslav; Walters, Raymond; Carey, Caitlin E; Rosengren, Anders; Strom, Nora I; Hauberg, Mads Engel; Zeng, Biao; Hoffman, Gabriel; Zhang, Wen; Bybjerg-Grauholm, Jonas; Bækvad-Hansen, Marie; Agerbo, Esben; Cormand, Bru; Nordentoft, Merete; Werge, Thomas; Mors, Ole; Hougaard, David M; Buxbaum, Joseph D; Faraone, Stephen V; Franke, Barbara; Dalsgaard, Søren; Mortensen, Preben B; Robinson, Elise B; Roussos, Panos; Neale, Benjamin M; Daly, Mark J; Børglum, Anders D | October 1, 2022 | Not Determined |
36124823 | Create Study | Specific Associations Between Type of Childhood Abuse and Elevated C-Reactive Protein in Young Adult Psychiatric Rehabilitation Participants. | The international journal of neuropsychopharmacology | Jabbi, Mbemba M; Harvey, Philip D; Kotwicki, Raymond J; Nemeroff, Charles B | November 17, 2022 | Not Determined |
36123423 | Create Study | Comment on: What genes are differentially expressed in individuals with schizophrenia? A systematic review. | Molecular psychiatry | Hoffman, Gabriel E; Jaffe, Andrew E; Gandal, Michael J; Collado-Torres, Leonardo; Sieberts, Solveig K; Devlin, Bernie; Geschwind, Daniel H; Weinberger, Daniel R; Roussos, Panos | February 1, 2023 | Not Determined |
36094096 | Create Study | Integrating multi-omics summary data using a Mendelian randomization framework. | Briefings in bioinformatics | Jin, Chong; Lee, Brian; Shen, Li; Long, Qi; Alzheimer’s Disease Neuroimaging Initiative; Alzheimer’s Disease Metabolomics Consortium | November 19, 2022 | Not Determined |
36085003 | Create Study | Focus on your locus with a massively parallel reporter assay. | Journal of neurodevelopmental disorders | McAfee, Jessica C; Bell, Jessica L; Krupa, Oleh; Matoba, Nana; Stein, Jason L; Won, Hyejung | September 9, 2022 | Not Determined |
36083269 | Create Study | Building integrative functional maps of gene regulation. | Human molecular genetics | Xu, Jinrui; Pratt, Henry E; Moore, Jill E; Gerstein, Mark B; Weng, Zhiping | October 20, 2022 | Not Determined |
36070559 | Create Study | Enhancer Function and Evolutionary Roles of Human Accelerated Regions. | Annual review of genetics | Whalen, Sean; Pollard, Katherine S | November 30, 2022 | Not Determined |
36064543 | Create Study | A translational genomics approach identifies IL10RB as the top candidate gene target for COVID-19 susceptibility. | NPJ genomic medicine | Voloudakis, Georgios; Vicari, James M; Venkatesh, Sanan; Hoffman, Gabriel E; Dobrindt, Kristina; Zhang, Wen; Beckmann, Noam D; Higgins, Christina A; Argyriou, Stathis; Jiang, Shan; Hoagland, Daisy; Gao, Lina; Corvelo, André; Cho, Kelly; Lee, Kyung Min; Bian, Jiantao; Lee, Jennifer S; Iyengar, Sudha K; Luoh, Shiuh-Wen; Akbarian, Schahram; Striker, Robert; Assimes, Themistocles L; Schadt, Eric E; Lynch, Julie A; Merad, Miriam; tenOever, Benjamin R; Charney, Alexander W; Mount Sinai COVID-19 Biobank; VA Million Veteran Program COVID-19 Science Initiative; Brennand, Kristen J; Fullard, John F; Roussos, Panos | September 5, 2022 | Not Determined |
36057282 | Create Study | Multiplexed functional genomic assays to decipher the noncoding genome. | Human molecular genetics | Cooper, Yonatan A; Guo, Qiuyu; Geschwind, Daniel H | October 20, 2022 | Not Determined |
36050550 | Create Study | Polygenic enrichment distinguishes disease associations of individual cells in single-cell RNA-seq data. | Nature genetics | Zhang, Martin Jinye; Hou, Kangcheng; Dey, Kushal K; Sakaue, Saori; Jagadeesh, Karthik A; Weinand, Kathryn; Taychameekiatchai, Aris; Rao, Poorvi; Pisco, Angela Oliveira; Zou, James; Wang, Bruce; Gandal, Michael; Raychaudhuri, Soumya; Pasaniuc, Bogdan; Price, Alkes L | October 1, 2022 | Not Determined |
36007006 | Create Study | Molecular and cellular evolution of the primate dorsolateral prefrontal cortex. | Science (New York, N.Y.) | Ma, Shaojie; Skarica, Mario; Li, Qian; Xu, Chuan; Risgaard, Ryan D; Tebbenkamp, Andrew T N; Mato-Blanco, Xoel; Kovner, Rothem; Krsnik, Željka; de Martin, Xabier; Luria, Victor; Martí-Pérez, Xavier; Liang, Dan; Karger, Amir; Schmidt, Danielle K; Gomez-Sanchez, Zachary; Qi, Cai; Gobeske, Kevin T; Pochareddy, Sirisha; Debnath, Ashwin; Hottman, Cade J; Spurrier, Joshua; Teo, Leon; Boghdadi, Anthony G; Homman-Ludiye, Jihane; Ely, John J; Daadi, Etienne W; Mi, Da; Daadi, Marcel; Marín, Oscar; Hof, Patrick R; Rasin, Mladen-Roko; Bourne, James; Sherwood, Chet C; Santpere, Gabriel; Girgenti, Matthew J; Strittmatter, Stephen M; Sousa, André M M; Sestan, Nenad | September 30, 2022 | Not Determined |
35915230 | Create Study | Single-cell transcriptional profiling in brain reward structures. | Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology | Day, Jeremy J; Martinowich, Keri | January 1, 2023 | Not Determined |
35851062 | Create Study | High-throughput techniques enable advances in the roles of DNA and RNA secondary structures in transcriptional and post-transcriptional gene regulation. | Genome biology | Georgakopoulos-Soares, Ilias; Chan, Candace S Y; Ahituv, Nadav; Hemberg, Martin | July 18, 2022 | Not Determined |
35849618 | Create Study | Single-cell network biology characterizes cell type gene regulation for drug repurposing and phenotype prediction in Alzheimer''s disease. | PLoS computational biology | Gupta, Chirag; Xu, Jielin; Jin, Ting; Khullar, Saniya; Liu, Xiaoyu; Alatkar, Sayali; Cheng, Feixiong; Wang, Daifeng | July 1, 2022 | Not Determined |
35844224 | Create Study | Distinct Phenotypes of Inflammation Associated Macrophages and Microglia in the Prefrontal Cortex Schizophrenia Compared to Controls. | Frontiers in neuroscience | Zhu, Yunting; Webster, Maree J; Murphy, Caitlin E; Middleton, Frank A; Massa, Paul T; Liu, Chunyu; Dai, Rujia; Weickert, Cyndi Shannon | January 1, 2022 | Not Determined |
35767289 | Create Study | Convergence and Divergence of Rare Genetic Disorders on Brain Phenotypes: A Review. | JAMA psychiatry | Raznahan, Armin; Won, Hyejung; Glahn, David C; Jacquemont, Sébastien | August 1, 2022 | Not Determined |
35750513 | Create Study | The Neuroepigenome: Implications of Chemical and Physical Modifications of Genomic DNA in Schizophrenia. | Biological psychiatry | Girdhar, Kiran; Rahman, Samir; Dong, Pengfei; Fullard, John F; Roussos, Panos | September 15, 2022 | Not Determined |
35689177 | Create Study | spatialLIBD: an R/Bioconductor package to visualize spatially-resolved transcriptomics data. | BMC genomics | Pardo, Brenda; Spangler, Abby; Weber, Lukas M; Page, Stephanie C; Hicks, Stephanie C; Jaffe, Andrew E; Martinowich, Keri; Maynard, Kristen R; Collado-Torres, Leonardo | June 10, 2022 | Not Determined |
35680911 | Create Study | Association between resting-state functional brain connectivity and gene expression is altered in autism spectrum disorder. | Nature communications | Berto, Stefano; Treacher, Alex H; Caglayan, Emre; Luo, Danni; Haney, Jillian R; Gandal, Michael J; Geschwind, Daniel H; Montillo, Albert A; Konopka, Genevieve | June 9, 2022 | Not Determined |
35588487 | Create Study | Revisiting the Need for a PTSD Brain Bank; Commentary on Friedman. | Psychiatry | Vermetten, Eric; Snijders, Clara; Daskalakis, Nikolaos P; Rutten, Bart P F | January 1, 2022 | Not Determined |
35573091 | Create Study | High-throughput characterization of the role of non-B DNA motifs on promoter function. | Cell genomics | Georgakopoulos-Soares, Ilias; Victorino, Jesus; Parada, Guillermo E; Agarwal, Vikram; Zhao, Jingjing; Wong, Hei Yuen; Umar, Mubarak Ishaq; Elor, Orry; Muhwezi, Allan; An, Joon-Yong; Sanders, Stephan J; Kwok, Chun Kit; Inoue, Fumitaka; Hemberg, Martin; Ahituv, Nadav | April 13, 2022 | Not Determined |
35552371 | Create Study | Sex differences in the genetic architecture of cognitive resilience to Alzheimer''s disease. | Brain : a journal of neurology | Eissman, Jaclyn M; Dumitrescu, Logan; Mahoney, Emily R; Smith, Alexandra N; Mukherjee, Shubhabrata; Lee, Michael L; Scollard, Phoebe; Choi, Seo Eun; Bush, William S; Engelman, Corinne D; Lu, Qiongshi; Fardo, David W; Trittschuh, Emily H; Mez, Jesse; Kaczorowski, Catherine C; Hernandez Saucedo, Hector; Widaman, Keith F; Buckley, Rachel F; Properzi, Michael J; Mormino, Elizabeth C; Yang, Hyun Sik; Harrison, Theresa M; Hedden, Trey; Nho, Kwangsik; Andrews, Shea J; Tommet, Douglas; Hadad, Niran; Sanders, R Elizabeth; Ruderfer, Douglas M; Gifford, Katherine A; Zhong, Xiaoyuan; Raghavan, Neha S; Vardarajan, Badri N; Alzheimer’s Disease Neuroimaging Initiative (ADNI); Alzheimer’s Disease Genetics Consortium (ADGC); A4 Study Team; Pericak-Vance, Margaret A; Farrer, Lindsay A; Wang, Li San; Cruchaga, Carlos; Schellenberg, Gerard D; Cox, Nancy J; Haines, Jonathan L; Keene, C Dirk; Saykin, Andrew J; Larson, Eric B; Sperling, Reisa A; Mayeux, Richard; Cuccaro, Michael L; Bennett, David A; Schneider, Julie A; Crane, Paul K; Jefferson, Angela L; Hohman, Timothy J | July 29, 2022 | Not Determined |
35549943 | Create Study | Sustained correction of hippocampal neurogenic and cognitive deficits after a brief treatment by Nutlin-3 in a mouse model of fragile X syndrome. | BMC medicine | Javadi, Sahar; Li, Yue; Sheng, Jie; Zhao, Lucy; Fu, Yao; Wang, Daifeng; Zhao, Xinyu | May 13, 2022 | Not Determined |
35482478 | Create Study | SpatialExperiment: infrastructure for spatially-resolved transcriptomics data in R using Bioconductor. | Bioinformatics (Oxford, England) | Righelli, Dario; Weber, Lukas M; Crowell, Helena L; Pardo, Brenda; Collado-Torres, Leonardo; Ghazanfar, Shila; Lun, Aaron T L; Hicks, Stephanie C; Risso, Davide | May 26, 2022 | Not Determined |
35480297 | Create Study | A deep manifold-regularized learning model for improving phenotype prediction from multi-modal data. | Nature computational science | Nguyen, Nam D; Huang, Jiawei; Wang, Daifeng | January 1, 2022 | Not Determined |
35474104 | Create Study | Epitranscriptomic dynamics in brain development and disease. | Molecular psychiatry | Shafik, Andrew M; Allen, Emily G; Jin, Peng | September 1, 2022 | Not Determined |
35440779 | Create Study | Genomics, convergent neuroscience and progress in understanding autism spectrum disorder. | Nature reviews. Neuroscience | Willsey, Helen Rankin; Willsey, A Jeremy; Wang, Belinda; State, Matthew W | June 1, 2022 | Not Determined |
35422469 | Create Study | Chromatin architecture in addiction circuitry identifies risk genes and potential biological mechanisms underlying cigarette smoking and alcohol use traits. | Molecular psychiatry | Sey, Nancy Y A; Hu, Benxia; Iskhakova, Marina; Lee, Sool; Sun, Huaigu; Shokrian, Neda; Ben Hutta, Gabriella; Marks, Jesse A; Quach, Bryan C; Johnson, Eric O; Hancock, Dana B; Akbarian, Schahram; Won, Hyejung | July 1, 2022 | Not Determined |
35379910 | Create Study | The impact of educational attainment, intelligence and intellectual disability on schizophrenia: a Swedish population-based register and genetic study. | Molecular psychiatry | Song, Jie; Yao, Shuyang; Kowalec, Kaarina; Lu, Yi; Sariaslan, Amir; Szatkiewicz, Jin P; Larsson, Henrik; Lichtenstein, Paul; Hultman, Christina M; Sullivan, Patrick F | May 1, 2022 | Not Determined |
35351869 | Create Study | Human forebrain organoids reveal connections between valproic acid exposure and autism risk. | Translational psychiatry | Meng, Qingtuan; Zhang, Wendiao; Wang, Xuan; Jiao, Chuan; Xu, Sheng; Liu, Chunyu; Tang, Beisha; Chen, Chao | March 29, 2022 | Not Determined |
35332326 | Create Study | Chromatin domain alterations linked to 3D genome organization in a large cohort of schizophrenia and bipolar disorder brains. | Nature neuroscience | Girdhar, Kiran; Hoffman, Gabriel E; Bendl, Jaroslav; Rahman, Samir; Dong, Pengfei; Liao, Will; Hauberg, Mads E; Sloofman, Laura; Brown, Leanne; Devillers, Olivia; Kassim, Bibi S; Wiseman, Jennifer R; Park, Royce; Zharovsky, Elizabeth; Jacobov, Rivky; Flatow, Elie; Kozlenkov, Alexey; Gilgenast, Thomas; Johnson, Jessica S; Couto, Lizette; Peters, Mette A; Phillips-Cremins, Jennifer E; Hahn, Chang-Gyu; Gur, Raquel E; Tamminga, Carol A; Lewis, David A; Haroutunian, Vahram; PsychENCODE Consortium; Dracheva, Stella; Lipska, Barbara K; Marenco, Stefano; Kundakovic, Marija; Fullard, John F; Jiang, Yan; Roussos, Panos; Akbarian, Schahram | April 1, 2022 | Not Determined |
35315433 | Create Study | Massively parallel reporter perturbation assays uncover temporal regulatory architecture during neural differentiation. | Nature communications | Kreimer, Anat; Ashuach, Tal; Inoue, Fumitaka; Khodaverdian, Alex; Deng, Chengyu; Yosef, Nir; Ahituv, Nadav | March 21, 2022 | Not Determined |
35274675 | Create Study | CellWalkR: an R package for integrating and visualizing single-cell and bulk data to resolve regulatory elements. | Bioinformatics (Oxford, England) | Przytycki, Pawel F; Pollard, Katherine S | April 28, 2022 | Not Determined |
35272348 | Create Study | LRcell: detecting the source of differential expression at the sub-cell-type level from bulk RNA-seq data. | Briefings in bioinformatics | Ma, Wenjing; Sharma, Sumeet; Jin, Peng; Gourley, Shannon L; Qin, Zhaohui S | May 13, 2022 | Not Determined |
35260864 | Create Study | Amygdala and anterior cingulate transcriptomes from individuals with bipolar disorder reveal downregulated neuroimmune and synaptic pathways. | Nature neuroscience | Zandi, Peter P; Jaffe, Andrew E; Goes, Fernando S; Burke, Emily E; Collado-Torres, Leonardo; Huuki-Myers, Louise; Seyedian, Arta; Lin, Yian; Seifuddin, Fayaz; Pirooznia, Mehdi; Ross, Christopher A; Kleinman, Joel E; Weinberger, Daniel R; Hyde, Thomas M | March 1, 2022 | Not Determined |
35236118 | Create Study | Genetics and Brain Transcriptomics of Completed Suicide. | The American journal of psychiatry | Punzi, Giovanna; Ursini, Gianluca; Chen, Qiang; Radulescu, Eugenia; Tao, Ran; Huuki, Louise A; Di Carlo, Pasquale; Collado-Torres, Leonardo; Shin, Joo Heon; Catanesi, Roberto; Jaffe, Andrew E; Hyde, Thomas M; Kleinman, Joel E; Mackay, Trudy F C; Weinberger, Daniel R | March 1, 2022 | Not Determined |
35233546 | Create Study | System-wide transcriptome damage and tissue identity loss in COVID-19 patients. | Cell reports. Medicine | Park, Jiwoon; Foox, Jonathan; Hether, Tyler; Danko, David C; Warren, Sarah; Kim, Youngmi; Reeves, Jason; Butler, Daniel J; Mozsary, Christopher; Rosiene, Joel; Shaiber, Alon; Afshin, Evan E; MacKay, Matthew; Rendeiro, André F; Bram, Yaron; Chandar, Vasuretha; Geiger, Heather; Craney, Arryn; Velu, Priya; Melnick, Ari M; Hajirasouliha, Iman; Beheshti, Afshin; Taylor, Deanne; Saravia-Butler, Amanda; Singh, Urminder; Wurtele, Eve Syrkin; Schisler, Jonathan; Fennessey, Samantha; Corvelo, André; Zody, Michael C; Germer, Soren; Salvatore, Steven; Levy, Shawn; Wu, Shixiu; Tatonetti, Nicholas P; Shapira, Sagi; Salvatore, Mirella; Westblade, Lars F; Cushing, Melissa; Rennert, Hanna; Kriegel, Alison J; Elemento, Olivier; Imielinski, Marcin; Rice, Charles M; Borczuk, Alain C; Meydan, Cem; Schwartz, Robert E; Mason, Christopher E | February 15, 2022 | Not Determined |
35170363 | Create Study | Evaluating the challenges and reproducibility of studies investigating DNA methylation signatures of psychological stress. | Epigenomics | Zhang, Yun; Liu, Chunyu | April 1, 2022 | Not Determined |
35136070 | Create Study | SMAP is a pipeline for sample matching in proteogenomics. | Nature communications | Li, Ling; Niu, Mingming; Erickson, Alyssa; Luo, Jie; Rowbotham, Kincaid; Guo, Kai; Huang, He; Li, Yuxin; Jiang, Yi; Hur, Junguk; Liu, Chunyu; Peng, Junmin; Wang, Xusheng | February 8, 2022 | Not Determined |
35132260 | Create Study | Curated variation benchmarks for challenging medically relevant autosomal genes. | Nature biotechnology | Wagner, Justin; Olson, Nathan D; Harris, Lindsay; McDaniel, Jennifer; Cheng, Haoyu; Fungtammasan, Arkarachai; Hwang, Yih-Chii; Gupta, Richa; Wenger, Aaron M; Rowell, William J; Khan, Ziad M; Farek, Jesse; Zhu, Yiming; Pisupati, Aishwarya; Mahmoud, Medhat; Xiao, Chunlin; Yoo, Byunggil; Sahraeian, Sayed Mohammad Ebrahim; Miller, Danny E; Jáspez, David; Lorenzo-Salazar, José M; Muñoz-Barrera, Adrián; Rubio-Rodríguez, Luis A; Flores, Carlos; Narzisi, Giuseppe; Evani, Uday Shanker; Clarke, Wayne E; Lee, Joyce; Mason, Christopher E; Lincoln, Stephen E; Miga, Karen H; Ebbert, Mark T W; Shumate, Alaina; Li, Heng; Chin, Chen-Shan; Zook, Justin M; Sedlazeck, Fritz J | May 1, 2022 | Not Determined |
35115012 | Create Study | Comparison of confound adjustment methods in the construction of gene co-expression networks. | Genome biology | Cote, Alanna C; Young, Hannah E; Huckins, Laura M | February 3, 2022 | Not Determined |
35084939 | Create Study | A single-cell atlas of the normal and malformed human brain vasculature. | Science (New York, N.Y.) | Winkler, Ethan A; Kim, Chang N; Ross, Jayden M; Garcia, Joseph H; Gil, Eugene; Oh, Irene; Chen, Lindsay Q; Wu, David; Catapano, Joshua S; Raygor, Kunal; Narsinh, Kazim; Kim, Helen; Weinsheimer, Shantel; Cooke, Daniel L; Walcott, Brian P; Lawton, Michael T; Gupta, Nalin; Zlokovic, Berislav V; Chang, Edward F; Abla, Adib A; Lim, Daniel A; Nowakowski, Tomasz J | March 4, 2022 | Not Determined |
35074468 | Create Study | Betacoronavirus-specific alternate splicing. | Genomics | Karlebach, Guy; Aronow, Bruce; Baylin, Stephen B; Butler, Daniel; Foox, Jonathan; Levy, Shawn; Meydan, Cem; Mozsary, Christopher; Saravia-Butler, Amanda M; Taylor, Deanne M; Wurtele, Eve; Mason, Christopher E; Beheshti, Afshin; Robinson, Peter N | March 1, 2022 | Not Determined |
35058635 | Create Study | Multi-ancestry eQTL meta-analysis of human brain identifies candidate causal variants for brain-related traits. | Nature genetics | Zeng, Biao; Bendl, Jaroslav; Kosoy, Roman; Fullard, John F; Hoffman, Gabriel E; Roussos, Panos | February 1, 2022 | Not Determined |
35045295 | Create Study | A bidirectional competitive interaction between circHomer1 and Homer1b within the orbitofrontal cortex regulates reversal learning. | Cell reports | Hafez, Alexander K; Zimmerman, Amber J; Papageorgiou, Grigorios; Chandrasekaran, Jayapriya; Amoah, Stephen K; Lin, Rixing; Lozano, Evelyn; Pierotti, Caroline; Dell'Orco, Michela; Hartley, Brigham J; Alural, Begüm; Lalonde, Jasmin; Esposito, John Matthew; Berretta, Sabina; Squassina, Alessio; Chillotti, Caterina; Voloudakis, Georgios; Shao, Zhiping; Fullard, John F; Brennand, Kristen J; Turecki, Gustavo; Roussos, Panos; Perlis, Roy H; Haggarty, Stephen J; Perrone-Bizzozero, Nora; Brigman, Jonathan L; Mellios, Nikolaos | January 18, 2022 | Not Determined |
34912114 | Create Study | Individual human cortical progenitors can produce excitatory and inhibitory neurons. | Nature | Delgado, Ryan N; Allen, Denise E; Keefe, Matthew G; Mancia Leon, Walter R; Ziffra, Ryan S; Crouch, Elizabeth E; Alvarez-Buylla, Arturo; Nowakowski, Tomasz J | January 1, 2022 | Not Determined |
34888418 | Create Study | Children and Adolescents'' Psychological Well-Being Became Worse in Heavily Hit Chinese Provinces during the COVID-19 Epidemic. | Journal of psychiatry and brain science | Ma, Jing; Ding, Jun; Hu, Jiawen; Wang, Kai; Xiao, Shuaijun; Luo, Ting; Yu, Shuxiang; Liu, Chuntao; Xu, Yunxuan; Liu, Yingxian; Wang, Changhong; Guo, Suqin; Yang, Xiaohua; Song, Haidong; Geng, Yaoguo; Jin, Yu; Chen, Huayun; Liu, Chunyu | October 1, 2021 | Not Determined |
34872606 | Create Study | The SEQC2 epigenomics quality control (EpiQC) study. | Genome biology | Foox, Jonathan; Nordlund, Jessica; Lalancette, Claudia; Gong, Ting; Lacey, Michelle; Lent, Samantha; Langhorst, Bradley W; Ponnaluri, V K Chaithanya; Williams, Louise; Padmanabhan, Karthik Ramaswamy; Cavalcante, Raymond; Lundmark, Anders; Butler, Daniel; Mozsary, Christopher; Gurvitch, Justin; Greally, John M; Suzuki, Masako; Menor, Mark; Nasu, Masaki; Alonso, Alicia; Sheridan, Caroline; Scherer, Andreas; Bruinsma, Stephen; Golda, Gosia; Muszynska, Agata; Łabaj, Paweł P; Campbell, Matthew A; Wos, Frank; Raine, Amanda; Liljedahl, Ulrika; Axelsson, Tomas; Wang, Charles; Chen, Zhong; Yang, Zhaowei; Li, Jing; Yang, Xiaopeng; Wang, Hongwei; Melnick, Ari; Guo, Shang; Blume, Alexander; Franke, Vedran; Ibanez de Caceres, Inmaculada; Rodriguez-Antolin, Carlos; Rosas, Rocio; Davis, Justin Wade; Ishii, Jennifer; Megherbi, Dalila B; Xiao, Wenming; Liao, Will; Xu, Joshua; Hong, Huixiao; Ning, Baitang; Tong, Weida; Akalin, Altuna; Wang, Yunliang; Deng, Youping; Mason, Christopher E | December 6, 2021 | Not Determined |
34822785 | Create Study | Fundamental Biological Features of Spaceflight: Advancing the Field to Enable Deep-Space Exploration. | Cell | Afshinnekoo, Ebrahim; Scott, Ryan T; MacKay, Matthew J; Pariset, Eloise; Cekanaviciute, Egle; Barker, Richard; Gilroy, Simon; Hassane, Duane; Smith, Scott M; Zwart, Sara R; Nelman-Gonzalez, Mayra; Crucian, Brian E; Ponomarev, Sergey A; Orlov, Oleg I; Shiba, Dai; Muratani, Masafumi; Yamamoto, Masayuki; Richards, Stephanie E; Vaishampayan, Parag A; Meydan, Cem; Foox, Jonathan; Myrrhe, Jacqueline; Istasse, Eric; Singh, Nitin; Venkateswaran, Kasthuri; Keune, Jessica A; Ray, Hami E; Basner, Mathias; Miller, Jack; Vitaterna, Martha Hotz; Taylor, Deanne M; Wallace, Douglas; Rubins, Kathleen; Bailey, Susan M; Grabham, Peter; Costes, Sylvain V; Mason, Christopher E; Beheshti, Afshin | November 24, 2021 | Not Determined |
34819502 | Create Study | LSD1 inhibition sustains T cell invigoration with a durable response to PD-1 blockade. | Nature communications | Liu, Yi; Debo, Brian; Li, Mingfeng; Shi, Zhennan; Sheng, Wanqiang; Shi, Yang | November 24, 2021 | Not Determined |
34799674 | Create Study | Manifold learning analysis suggests strategies to align single-cell multimodal data of neuronal electrophysiology and transcriptomics. | Communications biology | Huang, Jiawei; Sheng, Jie; Wang, Daifeng | November 19, 2021 | Not Determined |
34798047 | Create Study | Transcriptomic taxonomy and neurogenic trajectories of adult human, macaque, and pig hippocampal and entorhinal cells. | Neuron | Franjic, Daniel; Skarica, Mario; Ma, Shaojie; Arellano, Jon I; Tebbenkamp, Andrew T N; Choi, Jinmyung; Xu, Chuan; Li, Qian; Morozov, Yury M; Andrijevic, David; Vrselja, Zvonimir; Spajic, Ana; Santpere, Gabriel; Li, Mingfeng; Zhang, Shupei; Liu, Yang; Spurrier, Joshua; Zhang, Le; Gudelj, Ivan; Rapan, Lucija; Takahashi, Hideyuki; Huttner, Anita; Fan, Rong; Strittmatter, Stephen M; Sousa, Andre M M; Rakic, Pasko; Sestan, Nenad | February 2, 2022 | Not Determined |
34788620 | Create Study | Full-length transcript sequencing of human and mouse cerebral cortex identifies widespread isoform diversity and alternative splicing. | Cell reports | Leung, Szi Kay; Jeffries, Aaron R; Castanho, Isabel; Jordan, Ben T; Moore, Karen; Davies, Jonathan P; Dempster, Emma L; Bray, Nicholas J; O'Neill, Paul; Tseng, Elizabeth; Ahmed, Zeshan; Collier, David A; Jeffery, Erin D; Prabhakar, Shyam; Schalkwyk, Leonard; Jops, Connor; Gandal, Michael J; Sheynkman, Gloria M; Hannon, Eilis; Mill, Jonathan | November 16, 2021 | Not Determined |
34758195 | Create Study | Engagement of vascular early response genes typifies mild cognitive impairment. | Alzheimer''s & dementia : the journal of the Alzheimer''s Association | Katsel, Pavel; Fam, Peter; Tan, Weilun; Khan, Sonia; Gama-Sosa, Miguel; De Gasperi, Rita; Roussos, Panos; Robinson, Ari; Cooper, Itzik; Schnaider-Beeri, Michal; Haroutunian, Vahram | July 1, 2022 | Not Determined |
34749795 | Create Study | The Sequencing Quality Control 2 study: establishing community standards for sequencing in precision medicine. | Genome biology | Mercer, Tim R; Xu, Joshua; Mason, Christopher E; Tong, Weida; MAQC/SEQC2 Consortium | November 8, 2021 | Not Determined |
34737457 | Create Study | Recognizing the importance of childhood maltreatment as a critical factor in psychiatric diagnoses, treatment, research, prevention, and education. | Molecular psychiatry | Teicher, Martin H; Gordon, Jeoffry B; Nemeroff, Charles B | March 1, 2022 | Not Determined |
34728797 | Create Study | Amygdala DCX and blood Cdk14 are implicated as cross-species indicators of individual differences in fear, extinction, and resilience to trauma exposure. | Molecular psychiatry | Maheu, M E; Sharma, S; King, G; Maddox, S A; Wingo, A; Lori, A; Michopoulos, V; Richardson, R; Ressler, K J | February 1, 2022 | Not Determined |
34680927 | Create Study | Evaluation of Genotype-Based Gene Expression Model Performance: A Cross-Framework and Cross-Dataset Study. | Genes | Tavares, Vânia; Monteiro, Joana; Vassos, Evangelos; Coleman, Jonathan; Prata, Diana | September 28, 2021 | Not Determined |
34674833 | Create Study | Multiple Comparisons and Inappropriate Statistical Testing Lead to Spurious Sex Differences in Gene Expression. | Biological psychiatry | Mukamel, Eran A | January 1, 2022 | Not Determined |
34668925 | Create Study | Use of the PsycheMERGE Network to Investigate the Association Between Depression Polygenic Scores and White Blood Cell Count. | JAMA psychiatry | Sealock, Julia M; Lee, Younga H; Moscati, Arden; Venkatesh, Sanan; Voloudakis, Georgios; Straub, Peter; Singh, Kritika; Feng, Yen-Chen A; Ge, Tian; Roussos, Panos; Smoller, Jordan W; Chen, Guanhua; Davis, Lea K | December 1, 2021 | Not Determined |
34663447 | Create Study | Comprehensive multi-omics integration identifies differentially active enhancers during human brain development with clinical relevance. | Genome medicine | Yousefi, Soheil; Deng, Ruizhi; Lanko, Kristina; Salsench, Eva Medico; Nikoncuk, Anita; van der Linde, Herma C; Perenthaler, Elena; van Ham, Tjakko J; Mulugeta, Eskeatnaf; Barakat, Tahsin Stefan | October 19, 2021 | Not Determined |
34663425 | Create Study | DNA methylation-calling tools for Oxford Nanopore sequencing: a survey and human epigenome-wide evaluation. | Genome biology | Liu, Yang; Rosikiewicz, Wojciech; Pan, Ziwei; Jillette, Nathaniel; Wang, Ping; Taghbalout, Aziz; Foox, Jonathan; Mason, Christopher; Carroll, Martin; Cheng, Albert; Li, Sheng | October 18, 2021 | Not Determined |
34652256 | Create Study | Spatiotemporal specificity of correlated DNA methylation and gene expression pairs across different human tissues and stages of brain development. | Epigenetics | Wang, Kangli; Dai, Rujia; Xia, Yan; Tian, Jianghua; Jiao, Chuan; Mikhailova, Tatiana; Zhang, Chunling; Chen, Chao; Liu, Chunyu | October 1, 2022 | Not Determined |
34646915 | Create Study | Gene expression in the dorsolateral and ventromedial prefrontal cortices implicates immune-related gene networks in PTSD. | Neurobiology of stress | Logue, Mark W; Zhou, Zhenwei; Morrison, Filomene G; Wolf, Erika J; Daskalakis, Nikolaos P; Chatzinakos, Christos; Georgiadis, Foivos; Labadorf, Adam T; Girgenti, Matthew J; Young, Keith A; Williamson, Douglas E; Zhao, Xiang; Grenier, Jaclyn Garza; Traumatic Stress Brain Research Group; Huber, Bertrand Russell; Miller, Mark W | November 1, 2021 | Not Determined |
34632689 | Create Study | Sites of active gene regulation in the prenatal frontal cortex and their role in neuropsychiatric disorders. | American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics | Kouakou, Manuela R; Cameron, Darren; Hannon, Eilis; Dempster, Emma L; Mill, Jonathan; Hill, Matthew J; Bray, Nicholas J | September 1, 2021 | Not Determined |
34616060 | Create Study | Single-cell epigenomics reveals mechanisms of human cortical development. | Nature | Ziffra, Ryan S; Kim, Chang N; Ross, Jayden M; Wilfert, Amy; Turner, Tychele N; Haeussler, Maximilian; Casella, Alex M; Przytycki, Pawel F; Keough, Kathleen C; Shin, David; Bogdanoff, Derek; Kreimer, Anat; Pollard, Katherine S; Ament, Seth A; Eichler, Evan E; Ahituv, Nadav; Nowakowski, Tomasz J | October 1, 2021 | Not Determined |
34599306 | Create Study | Hominini-specific regulation of CBLN2 increases prefrontal spinogenesis. | Nature | Shibata, Mikihito; Pattabiraman, Kartik; Muchnik, Sydney K; Kaur, Navjot; Morozov, Yury M; Cheng, Xiaoyang; Waxman, Stephen G; Sestan, Nenad | October 1, 2021 | Not Determined |
34599305 | Create Study | Regulation of prefrontal patterning and connectivity by retinoic acid. | Nature | Shibata, Mikihito; Pattabiraman, Kartik; Lorente-Galdos, Belen; Andrijevic, David; Kim, Suel-Kee; Kaur, Navjot; Muchnik, Sydney K; Xing, Xiaojun; Santpere, Gabriel; Sousa, Andre M M; Sestan, Nenad | October 1, 2021 | Not Determined |
34584908 | Create Study | From genetics to systems biology of stress-related mental disorders. | Neurobiology of stress | Dalvie, Shareefa; Chatzinakos, Chris; Al Zoubi, Obada; Georgiadis, Foivos; PGC-PTSD Systems Biology workgroup; Lancashire, Lee; Daskalakis, Nikolaos P | November 1, 2021 | Not Determined |
34545196 | Create Study | Prefrontal cortex, amygdala, and threat processing: implications for PTSD. | Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology | Alexandra Kredlow, M; Fenster, Robert J; Laurent, Emma S; Ressler, Kerry J; Phelps, Elizabeth A | January 1, 2022 | Not Determined |
34536354 | Create Study | Human microglia states are conserved across experimental models and regulate neural stem cell responses in chimeric organoids. | Cell stem cell | Popova, Galina; Soliman, Sarah S; Kim, Chang N; Keefe, Matthew G; Hennick, Kelsey M; Jain, Samhita; Li, Tao; Tejera, Dario; Shin, David; Chhun, Bryant B; McGinnis, Christopher S; Speir, Matthew; Gartner, Zev J; Mehta, Shalin B; Haeussler, Maximilian; Hengen, Keith B; Ransohoff, Richard R; Piao, Xianhua; Nowakowski, Tomasz J | December 2, 2021 | Not Determined |
34508786 | Create Study | Multiomic biological approaches to the study of child abuse and neglect. | Pharmacology, biochemistry, and behavior | Layfield, Savannah Dee; Duffy, Lucie Anne; Phillips, Karlye Allison; Lardenoije, Roy; Klengel, Torsten; Ressler, Kerry J | November 1, 2021 | Not Determined |
34504351 | Create Study | Performance assessment of DNA sequencing platforms in the ABRF Next-Generation Sequencing Study. | Nature biotechnology | Foox, Jonathan; Tighe, Scott W; Nicolet, Charles M; Zook, Justin M; Byrska-Bishop, Marta; Clarke, Wayne E; Khayat, Michael M; Mahmoud, Medhat; Laaguiby, Phoebe K; Herbert, Zachary T; Warner, Derek; Grills, George S; Jen, Jin; Levy, Shawn; Xiang, Jenny; Alonso, Alicia; Zhao, Xia; Zhang, Wenwei; Teng, Fei; Zhao, Yonggang; Lu, Haorong; Schroth, Gary P; Narzisi, Giuseppe; Farmerie, William; Sedlazeck, Fritz J; Baldwin, Don A; Mason, Christopher E | September 1, 2021 | Not Determined |
34497263 | Create Study | Characterising the shared genetic determinants of bipolar disorder, schizophrenia and risk-taking. | Translational psychiatry | Hindley, Guy; Bahrami, Shahram; Steen, Nils Eiel; O'Connell, Kevin S; Frei, Oleksandr; Shadrin, Alexey; Bettella, Francesco; Rødevand, Linn; Fan, Chun C; Dale, Anders M; Djurovic, Srdjan; Smeland, Olav B; Andreassen, Ole A | September 8, 2021 | Not Determined |
34493831 | Create Study | Induction of dopaminergic neurons for neuronal subtype-specific modeling of psychiatric disease risk. | Molecular psychiatry | Powell, Samuel K; O'Shea, Callan; Townsley, Kayla; Prytkova, Iya; Dobrindt, Kristina; Elahi, Rahat; Iskhakova, Marina; Lambert, Tova; Valada, Aditi; Liao, Will; Ho, Seok-Man; Slesinger, Paul A; Huckins, Laura M; Akbarian, Schahram; Brennand, Kristen J | May 1, 2023 | Not Determined |
34489590 | Create Study | An updated guide for the perplexed: cytometry in the high-dimensional era. | Nature immunology | Liechti, Thomas; Weber, Lukas M; Ashhurst, Thomas M; Stanley, Natalie; Prlic, Martin; Van Gassen, Sofie; Mair, Florian | October 1, 2021 | Not Determined |
34483043 | Create Study | Advances in profiling chromatin architecture shed light on the regulatory dynamics underlying brain disorders. | Seminars in cell & developmental biology | Pratt, Brandon M; Won, Hyejung | January 1, 2022 | Not Determined |
34478631 | Create Study | Rewiring of human neurodevelopmental gene regulatory programs by human accelerated regions. | Neuron | Girskis, Kelly M; Stergachis, Andrew B; DeGennaro, Ellen M; Doan, Ryan N; Qian, Xuyu; Johnson, Matthew B; Wang, Peter P; Sejourne, Gabrielle M; Nagy, M Aurel; Pollina, Elizabeth A; Sousa, André M M; Shin, Taehwan; Kenny, Connor J; Scotellaro, Julia L; Debo, Brian M; Gonzalez, Dilenny M; Rento, Lariza M; Yeh, Rebecca C; Song, Janet H T; Beaudin, Marc; Fan, Jean; Kharchenko, Peter V; Sestan, Nenad; Greenberg, Michael E; Walsh, Christopher A | October 20, 2021 | Not Determined |
34469739 | Create Study | Full-length isoform transcriptome of the developing human brain provides further insights into autism. | Cell reports | Chau, Kevin K; Zhang, Pan; Urresti, Jorge; Amar, Megha; Pramod, Akula Bala; Chen, Jiaye; Thomas, Amy; Corominas, Roser; Lin, Guan Ning; Iakoucheva, Lilia M | August 31, 2021 | Not Determined |
34446734 | Create Study | Epigenetic inactivation of the autophagy-lysosomal system in appendix in Parkinson''s disease. | Nature communications | Gordevicius, Juozas; Li, Peipei; Marshall, Lee L; Killinger, Bryan A; Lang, Sean; Ensink, Elizabeth; Kuhn, Nathan C; Cui, Wei; Maroof, Nazia; Lauria, Roberta; Rueb, Christina; Siebourg-Polster, Juliane; Maliver, Pierre; Lamp, Jared; Vega, Irving; Manfredsson, Fredric P; Britschgi, Markus; Labrie, Viviane | August 26, 2021 | Not Determined |
34433407 | Create Study | A pipeline for RNA-seq based eQTL analysis with automated quality control procedures. | BMC bioinformatics | Wang, Tao; Liu, Yongzhuang; Ruan, Junpeng; Dong, Xianjun; Wang, Yadong; Peng, Jiajie | August 25, 2021 | Not Determined |
34426698 | Create Study | Identification of neural oscillations and epileptiform changes in human brain organoids. | Nature neuroscience | Samarasinghe, Ranmal A; Miranda, Osvaldo A; Buth, Jessie E; Mitchell, Simon; Ferando, Isabella; Watanabe, Momoko; Allison, Thomas F; Kurdian, Arinnae; Fotion, Namie N; Gandal, Michael J; Golshani, Peyman; Plath, Kathrin; Lowry, William E; Parent, Jack M; Mody, Istvan; Novitch, Bennett G | October 1, 2021 | Not Determined |
34425903 | Create Study | Developmental dynamics of voltage-gated sodium channel isoform expression in the human and mouse brain. | Genome medicine | Liang, Lindsay; Fazel Darbandi, Siavash; Pochareddy, Sirisha; Gulden, Forrest O; Gilson, Michael C; Sheppard, Brooke K; Sahagun, Atehsa; An, Joon-Yong; Werling, Donna M; Rubenstein, John L R; Sestan, Nenad; Bender, Kevin J; Sanders, Stephan J | August 23, 2021 | Not Determined |
34416157 | Create Study | Brain-trait-associated variants impact cell-type-specific gene regulation during neurogenesis. | American journal of human genetics | Aygün, Nil; Elwell, Angela L; Liang, Dan; Lafferty, Michael J; Cheek, Kerry E; Courtney, Kenan P; Mory, Jessica; Hadden-Ford, Ellie; Krupa, Oleh; de la Torre-Ubieta, Luis; Geschwind, Daniel H; Love, Michael I; Stein, Jason L | September 2, 2021 | Not Determined |
34413513 | Create Study | A human forebrain organoid model of fragile X syndrome exhibits altered neurogenesis and highlights new treatment strategies. | Nature neuroscience | Kang, Yunhee; Zhou, Ying; Li, Yujing; Han, Yanfei; Xu, Jie; Niu, Weibo; Li, Ziyi; Liu, Shiying; Feng, Hao; Huang, Wen; Duan, Ranhui; Xu, Tianmin; Raj, Nisha; Zhang, Feiran; Dou, Juan; Xu, Chongchong; Wu, Hao; Bassell, Gary J; Warren, Stephen T; Allen, Emily G; Jin, Peng; Wen, Zhexing | October 1, 2021 | Not Determined |
34411509 | Create Study | A convergent molecular network underlying autism and congenital heart disease. | Cell systems | Rosenthal, Sara Brin; Willsey, Helen Rankin; Xu, Yuxiao; Mei, Yuan; Dea, Jeanselle; Wang, Sheng; Curtis, Charlotte; Sempou, Emily; Khokha, Mustafa K; Chi, Neil C; Willsey, Arthur Jeremy; Fisch, Kathleen M; Ideker, Trey | November 17, 2021 | Not Determined |
34332145 | Create Study | Direct reprogramming induces vascular regeneration post muscle ischemic injury. | Molecular therapy : the journal of the American Society of Gene Therapy | Kaur, Keerat; Hadas, Yoav; Kurian, Ann Anu; Żak, Magdalena M; Yoo, Jimeen; Mahmood, Asharee; Girard, Hanna; Komargodski, Rinat; Io, Toshiro; Santini, Maria Paola; Sultana, Nishat; Sharkar, Mohammad Tofael Kabir; Magadum, Ajit; Fargnoli, Anthony; Yoon, Seonghun; Chepurko, Elena; Chepurko, Vadim; Eliyahu, Efrat; Pinto, Dalila; Lebeche, Djamel; Kovacic, Jason C; Hajjar, Roger J; Rafii, Shahin; Zangi, Lior | October 6, 2021 | Not Determined |
34323598 | Create Study | DNA methylation differences in cortical grey and white matter in schizophrenia. | Epigenomics | Berdenis van Berlekom, Amber; Notman, Nina; Sneeboer, Marjolein Am; Snijders, Gijsje Jlj; Houtepen, Lotte C; Nispeling, Danny M; He, Yujie; Dracheva, Stella; Hol, Elly M; Kahn, René S; de Witte, Lot D; Boks, Marco P; Psychiatric Donor Program of the Netherlands Brain Bank (NBB-PSY) | August 1, 2021 | Not Determined |
34294919 | Create Study | Coexpression network architecture reveals the brain-wide and multiregional basis of disease susceptibility. | Nature neuroscience | Hartl, Christopher L; Ramaswami, Gokul; Pembroke, William G; Muller, Sandrine; Pintacuda, Greta; Saha, Ashis; Parsana, Princy; Battle, Alexis; Lage, Kasper; Geschwind, Daniel H | September 1, 2021 | Not Determined |
34230929 | Create Study | Betacoronavirus-specific alternate splicing. | bioRxiv : the preprint server for biology | Karlebach, Guy; Aronow, Bruce; Baylin, Stephen B; Butler, Daniel; Foox, Jonathan; Levy, Shawn; Meydan, Cem; Mozsary, Christopher; Saravia-Butler, Amanda M; Taylor, Deanne M; Wurtele, Eve; Mason, Christopher E; Beheshti, Afshin; Robinson, Peter N | July 2, 2021 | Not Determined |
34188182 | Create Study | Transcriptome-wide association study of post-trauma symptom trajectories identified GRIN3B as a potential biomarker for PTSD development. | Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology | Lori, Adriana; Schultebraucks, Katharina; Galatzer-Levy, Isaac; Daskalakis, Nikolaos P; Katrinli, Seyma; Smith, Alicia K; Myers, Amanda J; Richholt, Ryan; Huentelman, Matthew; Guffanti, Guia; Wuchty, Stefan; Gould, Felicia; Harvey, Philip D; Nemeroff, Charles B; Jovanovic, Tanja; Gerasimov, Ekaterina S; Maples-Keller, Jessica L; Stevens, Jennifer S; Michopoulos, Vasiliki; Rothbaum, Barbara O; Wingo, Aliza P; Ressler, Kerry J | September 1, 2021 | Not Determined |
34172755 | Create Study | Neuronal and glial 3D chromatin architecture informs the cellular etiology of brain disorders. | Nature communications | Hu, Benxia; Won, Hyejung; Mah, Won; Park, Royce B; Kassim, Bibi; Spiess, Keeley; Kozlenkov, Alexey; Crowley, Cheynna A; Pochareddy, Sirisha; PsychENCODE Consortium; Li, Yun; Dracheva, Stella; Sestan, Nenad; Akbarian, Schahram; Geschwind, Daniel H | June 25, 2021 | Not Determined |
34162698 | Create Study | Haplotype diversity and sequence heterogeneity of human telomeres. | Genome research | Grigorev, Kirill; Foox, Jonathan; Bezdan, Daniela; Butler, Daniel; Luxton, Jared J; Reed, Jake; McKenna, Miles J; Taylor, Lynn; George, Kerry A; Meydan, Cem; Bailey, Susan M; Mason, Christopher E | July 1, 2021 | Not Determined |
34161768 | Create Study | Transcriptional repression by FEZF2 restricts alternative identities of cortical projection neurons. | Cell reports | Tsyporin, Jeremiah; Tastad, David; Ma, Xiaokuang; Nehme, Antoine; Finn, Thomas; Huebner, Liora; Liu, Guoping; Gallardo, Daisy; Makhamreh, Amr; Roberts, Jacqueline M; Katzman, Solomon; Sestan, Nenad; McConnell, Susan K; Yang, Zhengang; Qiu, Shenfeng; Chen, Bin | June 22, 2021 | Not Determined |
34154796 | Create Study | Sex Differences in the Human Brain Transcriptome of Cases With Schizophrenia. | Biological psychiatry | Hoffman, Gabriel E; Ma, Yixuan; Montgomery, Kelsey S; Bendl, Jaroslav; Jaiswal, Manoj Kumar; Kozlenkov, Alex; Peters, Mette A; Dracheva, Stella; Fullard, John F; Chess, Andrew; Devlin, Bernie; Sieberts, Solveig K; Roussos, Panos | January 1, 2022 | Not Determined |
34140698 | Create Study | Spatial and cell type transcriptional landscape of human cerebellar development. | Nature neuroscience | Aldinger, Kimberly A; Thomson, Zachary; Phelps, Ian G; Haldipur, Parthiv; Deng, Mei; Timms, Andrew E; Hirano, Matthew; Santpere, Gabriel; Roco, Charles; Rosenberg, Alexander B; Lorente-Galdos, Belen; Gulden, Forrest O; O'Day, Diana; Overman, Lynne M; Lisgo, Steven N; Alexandre, Paula; Sestan, Nenad; Doherty, Dan; Dobyns, William B; Seelig, Georg; Glass, Ian A; Millen, Kathleen J | August 1, 2021 | Not Determined |
34140357 | Create Study | Common genetic variation influencing human white matter microstructure. | Science (New York, N.Y.) | Zhao, Bingxin; Li, Tengfei; Yang, Yue; Wang, Xifeng; Luo, Tianyou; Shan, Yue; Zhu, Ziliang; Xiong, Di; Hauberg, Mads E; Bendl, Jaroslav; Fullard, John F; Roussos, Panagiotis; Li, Yun; Stein, Jason L; Zhu, Hongtu | June 18, 2021 | Not Determined |
34125905 | Create Study | Cell type hierarchy reconstruction via reconciliation of multi-resolution cluster tree. | Nucleic acids research | Peng, Minshi; Wamsley, Brie; Elkins, Andrew G; Geschwind, Daniel H; Wei, Yuting; Roeder, Kathryn | September 20, 2021 | Not Determined |
34100031 | Create Study | IL10RB as a key regulator of COVID-19 host susceptibility and severity. | medRxiv : the preprint server for health sciences | Voloudakis, Georgios; Hoffman, Gabriel; Venkatesh, Sanan; Lee, Kyung Min; Dobrindt, Kristina; Vicari, James M; Zhang, Wen; Beckmann, Noam D; Jiang, Shan; Hoagland, Daisy; Bian, Jiantao; Gao, Lina; Corvelo, André; Cho, Kelly; Lee, Jennifer S; Iyengar, Sudha K; Luoh, Shiuh-Wen; Akbarian, Schahram; Striker, Robert; Assimes, Themistocles L; Schadt, Eric E; Merad, Miriam; tenOever, Benjamin R; Charney, Alexander W; Mount Sinai COVID-19 Biobank; VA Million Veteran Program COVID-19 Science Initiative; Brennand, Kristen J; Lynch, Julie A; Fullard, John F; Roussos, Panos | June 2, 2021 | Not Determined |
34077736 | Create Study | Mineralocorticoid receptors dampen glucocorticoid receptor sensitivity to stress via regulation of FKBP5. | Cell reports | Hartmann, Jakob; Bajaj, Thomas; Klengel, Claudia; Chatzinakos, Chris; Ebert, Tim; Dedic, Nina; McCullough, Kenneth M; Lardenoije, Roy; Joëls, Marian; Meijer, Onno C; McCann, Katharine E; Dudek, Serena M; Sarabdjitsingh, R Angela; Daskalakis, Nikolaos P; Klengel, Torsten; Gassen, Nils C; Schmidt, Mathias V; Ressler, Kerry J | June 1, 2021 | Not Determined |
34054421 | Create Study | Drug Response-Related DNA Methylation Changes in Schizophrenia, Bipolar Disorder, and Major Depressive Disorder. | Frontiers in neuroscience | Zhou, Jiaqi; Li, Miao; Wang, Xueying; He, Yuwen; Xia, Yan; Sweeney, John A; Kopp, Richard F; Liu, Chunyu; Chen, Chao | January 1, 2021 | Not Determined |
34044854 | Create Study | scGRNom: a computational pipeline of integrative multi-omics analyses for predicting cell-type disease genes and regulatory networks. | Genome medicine | Jin, Ting; Rehani, Peter; Ying, Mufang; Huang, Jiawei; Liu, Shuang; Roussos, Panagiotis; Wang, Daifeng | May 27, 2021 | Not Determined |
34039416 | Create Study | Characterization of the public transit air microbiome and resistome reveals geographical specificity. | Microbiome | Leung, M H Y; Tong, X; Bøifot, K O; Bezdan, D; Butler, D J; Danko, D C; Gohli, J; Green, D C; Hernandez, M T; Kelly, F J; Levy, S; Mason-Buck, G; Nieto-Caballero, M; Syndercombe-Court, D; Udekwu, K; Young, B G; Mason, C E; Dybwad, M; Lee, P K H | May 26, 2021 | Not Determined |
34035472 | Create Study | Identifying nootropic drug targets via large-scale cognitive GWAS and transcriptomics. | Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology | Lam, Max; Chen, Chia-Yen; Ge, Tian; Xia, Yan; Hill, David W; Trampush, Joey W; Yu, Jin; Knowles, Emma; Davies, Gail; Stahl, Eli A; Huckins, Laura; Liewald, David C; Djurovic, Srdjan; Melle, Ingrid; Christoforou, Andrea; Reinvang, Ivar; DeRosse, Pamela; Lundervold, Astri J; Steen, Vidar M; Espeseth, Thomas; Räikkönen, Katri; Widen, Elisabeth; Palotie, Aarno; Eriksson, Johan G; Giegling, Ina; Konte, Bettina; Hartmann, Annette M; Roussos, Panos; Giakoumaki, Stella; Burdick, Katherine E; Payton, Antony; Ollier, William; Chiba-Falek, Ornit; Koltai, Deborah C; Need, Anna C; Cirulli, Elizabeth T; Voineskos, Aristotle N; Stefanis, Nikos C; Avramopoulos, Dimitrios; Hatzimanolis, Alex; Smyrnis, Nikolaos; Bilder, Robert M; Freimer, Nelson B; Cannon, Tyrone D; London, Edythe; Poldrack, Russell A; Sabb, Fred W; Congdon, Eliza; Conley, Emily Drabant; Scult, Matthew A; Dickinson, Dwight; Straub, Richard E; Donohoe, Gary; Morris, Derek; Corvin, Aiden; Gill, Michael; Hariri, Ahmad R; Weinberger, Daniel R; Pendleton, Neil; Bitsios, Panos; Rujescu, Dan; Lahti, Jari; Le Hellard, Stephanie; Keller, Matthew C; Andreassen, Ole A; Deary, Ian J; Glahn, David C; Huang, Hailiang; Liu, Chunyu; Malhotra, Anil K; Lencz, Todd | September 1, 2021 | Not Determined |
34019542 | Create Study | Leveraging eQTLs to identify individual-level tissue of interest for a complex trait. | PLoS computational biology | Majumdar, Arunabha; Giambartolomei, Claudia; Cai, Na; Haldar, Tanushree; Schwarz, Tommer; Gandal, Michael; Flint, Jonathan; Pasaniuc, Bogdan | May 1, 2021 | Not Determined |
34017130 | Create Study | Cell-type-specific effects of genetic variation on chromatin accessibility during human neuronal differentiation. | Nature neuroscience | Liang, Dan; Elwell, Angela L; Aygün, Nil; Krupa, Oleh; Wolter, Justin M; Kyere, Felix A; Lafferty, Michael J; Cheek, Kerry E; Courtney, Kenan P; Yusupova, Marianna; Garrett, Melanie E; Ashley-Koch, Allison; Crawford, Gregory E; Love, Michael I; de la Torre-Ubieta, Luis; Geschwind, Daniel H; Stein, Jason L | July 1, 2021 | Not Determined |
33997155 | Create Study | Genomic factors underlying sex differences in trauma-related disorders. | Neurobiology of stress | Ponomareva, Olga Y; Ressler, Kerry J | May 1, 2021 | Not Determined |
33969380 | Create Study | Review of multi-omics data resources and integrative analysis for human brain disorders. | Briefings in functional genomics | Dong, Xianjun; Liu, Chunyu; Dozmorov, Mikhail | July 17, 2021 | Not Determined |
33958802 | Create Study | Brain gene co-expression networks link complement signaling with convergent synaptic pathology in schizophrenia. | Nature neuroscience | Kim, Minsoo; Haney, Jillian R; Zhang, Pan; Hernandez, Leanna M; Wang, Lee-Kai; Perez-Cano, Laura; Loohuis, Loes M Olde; de la Torre-Ubieta, Luis; Gandal, Michael J | June 1, 2021 | Not Determined |
33947435 | Create Study | Genome-wide histone acetylation analysis reveals altered transcriptional regulation in the Parkinson''s disease brain. | Molecular neurodegeneration | Toker, Lilah; Tran, Gia T; Sundaresan, Janani; Tysnes, Ole-Bjørn; Alves, Guido; Haugarvoll, Kristoffer; Nido, Gonzalo S; Dölle, Christian; Tzoulis, Charalampos | May 5, 2021 | Not Determined |
33934884 | Create Study | Sex Differences in Molecular Rhythms in the Human Cortex. | Biological psychiatry | Logan, Ryan W; Xue, Xiangning; Ketchesin, Kyle D; Hoffman, Gabriel; Roussos, Panos; Tseng, George; McClung, Colleen A; Seney, Marianne L | January 1, 2022 | Not Determined |
33909211 | Create Study | Case Report: Association of Comorbid Psychiatric Disorders and Sigmoid Prolapse with de novo POGZ Mutation. | Journal of autism and developmental disorders | Wright, Cary M; Guter, Stephen J; Cook, Edwin H | March 1, 2022 | Not Determined |
33904573 | Create Study | Identification of cell-type-specific marker genes from co-expression patterns in tissue samples. | Bioinformatics (Oxford, England) | Qiu, Yixuan; Wang, Jiebiao; Lei, Jing; Roeder, Kathryn | October 11, 2021 | Not Determined |
33902714 | Create Study | Performance evaluation of high-volume electret filter air samplers in aerosol microbiome research. | Environmental microbiome | Bøifot, Kari Oline; Gohli, Jostein; Skogan, Gunnar; Dybwad, Marius | July 28, 2020 | Not Determined |
33893716 | Create Study | Integration of evidence across human and model organism studies: A meeting report. | Genes, brain, and behavior | Palmer, Rohan H C; Johnson, Emma C; Won, Hyejung; Polimanti, Renato; Kapoor, Manav; Chitre, Apurva; Bogue, Molly A; Benca-Bachman, Chelsie E; Parker, Clarissa C; Verma, Anurag; Reynolds, Timothy; Ernst, Jason; Bray, Michael; Kwon, Soo Bin; Lai, Dongbing; Quach, Bryan C; Gaddis, Nathan C; Saba, Laura; Chen, Hao; Hawrylycz, Michael; Zhang, Shan; Zhou, Yuan; Mahaffey, Spencer; Fischer, Christian; Sanchez-Roige, Sandra; Bandrowski, Anita; Lu, Qing; Shen, Li; Philip, Vivek; Gelernter, Joel; Bierut, Laura J; Hancock, Dana B; Edenberg, Howard J; Johnson, Eric O; Nestler, Eric J; Barr, Peter B; Prins, Pjotr; Smith, Desmond J; Akbarian, Schahram; Thorgeirsson, Thorgeir; Walton, Dave; Baker, Erich; Jacobson, Daniel; Palmer, Abraham A; Miles, Michael; Chesler, Elissa J; Emerson, Jake; Agrawal, Arpana; Martone, Maryann; Williams, Robert W | April 23, 2021 | Not Determined |
33885362 | Create Study | The cis-regulatory effects of modern human-specific variants. | eLife | Weiss, Carly V; Harshman, Lana; Inoue, Fumitaka; Fraser, Hunter B; Petrov, Dmitri A; Ahituv, Nadav; Gokhman, David | April 22, 2021 | Not Determined |
33863995 | Create Study | FXR1 regulation of parvalbumin interneurons in the prefrontal cortex is critical for schizophrenia-like behaviors. | Molecular psychiatry | Shen, Minjie; Guo, Yu; Dong, Qiping; Gao, Yu; Stockton, Michael E; Li, Meng; Kannan, Sudharsan; Korabelnikov, Tomer; Schoeller, Keegan A; Sirois, Carissa L; Zhou, Chen; Le, Jonathan; Wang, Daifeng; Chang, Qiang; Sun, Qian-Quan; Zhao, Xinyu | November 1, 2021 | Not Determined |
33846625 | Create Study | Brain proteome-wide association study implicates novel proteins in depression pathogenesis. | Nature neuroscience | Wingo, Thomas S; Liu, Yue; Gerasimov, Ekaterina S; Gockley, Jake; Logsdon, Benjamin A; Duong, Duc M; Dammer, Eric B; Lori, Adriana; Kim, Paul J; Ressler, Kerry J; Beach, Thomas G; Reiman, Eric M; Epstein, Michael P; De Jager, Philip L; Lah, James J; Bennett, David A; Seyfried, Nicholas T; Levey, Allan I; Wingo, Aliza P | June 1, 2021 | Not Determined |
33833052 | Create Study | A model and test for coordinated polygenic epistasis in complex traits. | Proceedings of the National Academy of Sciences of the United States of America | Sheppard, Brooke; Rappoport, Nadav; Loh, Po-Ru; Sanders, Stephan J; Zaitlen, Noah; Dahl, Andy | April 13, 2021 | Not Determined |
33795001 | Create Study | A comprehensive metagenomics framework to characterize organisms relevant for planetary protection. | Microbiome | Danko, David C; Sierra, Maria A; Benardini, James N; Guan, Lisa; Wood, Jason M; Singh, Nitin; Seuylemezian, Arman; Butler, Daniel J; Ryon, Krista; Kuchin, Katerina; Meleshko, Dmitry; Bhattacharya, Chandrima; Venkateswaran, Kasthuri J; Mason, Christopher E | April 1, 2021 | Not Determined |
33767611 | Create Study | The Perils of Navigating Activity-Dependent Alternative Splicing of Neurexins. | Frontiers in molecular neuroscience | Liakath-Ali, Kif; Südhof, Thomas C | January 1, 2021 | Not Determined |
33712587 | Create Study | Shotgun transcriptome, spatial omics, and isothermal profiling of SARS-CoV-2 infection reveals unique host responses, viral diversification, and drug interactions. | Nature communications | Butler, Daniel; Mozsary, Christopher; Meydan, Cem; Foox, Jonathan; Rosiene, Joel; Shaiber, Alon; Danko, David; Afshinnekoo, Ebrahim; MacKay, Matthew; Sedlazeck, Fritz J; Ivanov, Nikolay A; Sierra, Maria; Pohle, Diana; Zietz, Michael; Gisladottir, Undina; Ramlall, Vijendra; Sholle, Evan T; Schenck, Edward J; Westover, Craig D; Hassan, Ciaran; Ryon, Krista; Young, Benjamin; Bhattacharya, Chandrima; Ng, Dianna L; Granados, Andrea C; Santos, Yale A; Servellita, Venice; Federman, Scot; Ruggiero, Phyllis; Fungtammasan, Arkarachai; Chin, Chen-Shan; Pearson, Nathaniel M; Langhorst, Bradley W; Tanner, Nathan A; Kim, Youngmi; Reeves, Jason W; Hether, Tyler D; Warren, Sarah E; Bailey, Michael; Gawrys, Justyna; Meleshko, Dmitry; Xu, Dong; Couto-Rodriguez, Mara; Nagy-Szakal, Dorottya; Barrows, Joseph; Wells, Heather; O'Hara, Niamh B; Rosenfeld, Jeffrey A; Chen, Ying; Steel, Peter A D; Shemesh, Amos J; Xiang, Jenny; Thierry-Mieg, Jean; Thierry-Mieg, Danielle; Iftner, Angelika; Bezdan, Daniela; Sanchez, Elizabeth; Campion Jr, Thomas R; Sipley, John; Cong, Lin; Craney, Arryn; Velu, Priya; Melnick, Ari M; Shapira, Sagi; Hajirasouliha, Iman; Borczuk, Alain; Iftner, Thomas; Salvatore, Mirella; Loda, Massimo; Westblade, Lars F; Cushing, Melissa; Wu, Shixiu; Levy, Shawn; Chiu, Charles; Schwartz, Robert E; Tatonetti, Nicholas; Rennert, Hanna; Imielinski, Marcin; Mason, Christopher E | March 12, 2021 | Not Determined |
33684137 | Create Study | MOSTWAS: Multi-Omic Strategies for Transcriptome-Wide Association Studies. | PLoS genetics | Bhattacharya, Arjun; Li, Yun; Love, Michael I | March 1, 2021 | Not Determined |
33658382 | Create Study | Integration and transfer learning of single-cell transcriptomes via cFIT. | Proceedings of the National Academy of Sciences of the United States of America | Peng, Minshi; Li, Yue; Wamsley, Brie; Wei, Yuting; Roeder, Kathryn | March 9, 2021 | Not Determined |
33657363 | Create Study | Post-transcriptional regulation of antiviral gene expression by N6-methyladenosine. | Cell reports | McFadden, Michael J; McIntyre, Alexa B R; Mourelatos, Haralambos; Abell, Nathan S; Gokhale, Nandan S; Ipas, Hélène; Xhemalçe, Blerta; Mason, Christopher E; Horner, Stacy M | March 2, 2021 | Not Determined |
33636110 | Create Study | Common Genetic Variation in Humans Impacts In Vitro Susceptibility to SARS-CoV-2 Infection. | Stem cell reports | Dobrindt, Kristina; Hoagland, Daisy A; Seah, Carina; Kassim, Bibi; O'Shea, Callan P; Murphy, Aleta; Iskhakova, Marina; Fernando, Michael B; Powell, Samuel K; Deans, P J Michael; Javidfar, Ben; Peter, Cyril; Møller, Rasmus; Uhl, Skyler A; Garcia, Meilin Fernandez; Kimura, Masaki; Iwasawa, Kentaro; Crary, John F; Kotton, Darrell N; Takebe, Takanori; Huckins, Laura M; tenOever, Benjamin R; Akbarian, Schahram; Brennand, Kristen J | March 9, 2021 | Not Determined |
33628435 | Create Study | netDx: Software for building interpretable patient classifiers by multi-''omic data integration using patient similarity networks. | F1000Research | Pai, Shraddha; Weber, Philipp; Isserlin, Ruth; Kaka, Hussam; Hui, Shirley; Shah, Muhammad Ahmad; Giudice, Luca; Giugno, Rosalba; Nøhr, Anne Krogh; Baumbach, Jan; Bader, Gary D | January 1, 2020 | Not Determined |
33603232 | Create Study | Publisher Correction: Transcriptome-scale spatial gene expression in the human dorsolateral prefrontal cortex. | Nature neuroscience | Maynard, Kristen R; Collado-Torres, Leonardo; Weber, Lukas M; Uytingco, Cedric; Barry, Brianna K; Williams, Stephen R; Catallini 2nd, Joseph L; Tran, Matthew N; Besich, Zachary; Tippani, Madhavi; Chew, Jennifer; Yin, Yifeng; Kleinman, Joel E; Hyde, Thomas M; Rao, Nikhil; Hicks, Stephanie C; Martinowich, Keri; Jaffe, Andrew E | April 1, 2021 | Not Determined |
33583425 | Create Study | CellWalker integrates single-cell and bulk data to resolve regulatory elements across cell types in complex tissues. | Genome biology | Przytycki, Pawel F; Pollard, Katherine S | February 14, 2021 | Not Determined |
33576176 | Create Study | Increasing the resolution and precision of psychiatric genome-wide association studies by re-imputing summary statistics using a large, diverse reference panel. | American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics | Chatzinakos, Chris; Lee, Donghyung; Cai, Na; Vladimirov, Vladimir I; Webb, Bradley T; Riley, Brien P; Flint, Jonathan; Kendler, Kenneth S; Ressler, Kerry J; Daskalakis, Nikolaos P; Bacanu, Silviu-Alin | January 1, 2021 | Not Determined |
33570495 | Create Study | Constructing and optimizing 3D atlases from 2D data with application to the developing mouse brain. | eLife | Young, David M; Fazel Darbandi, Siavash; Schwartz, Grace; Bonzell, Zachary; Yuruk, Deniz; Nojima, Mai; Gole, Laurent C; Rubenstein, John Lr; Yu, Weimiao; Sanders, Stephan J | February 11, 2021 | Not Determined |
33558695 | Create Study | Transcriptome-scale spatial gene expression in the human dorsolateral prefrontal cortex. | Nature neuroscience | Maynard, Kristen R; Collado-Torres, Leonardo; Weber, Lukas M; Uytingco, Cedric; Barry, Brianna K; Williams, Stephen R; Catallini 2nd, Joseph L; Tran, Matthew N; Besich, Zachary; Tippani, Madhavi; Chew, Jennifer; Yin, Yifeng; Kleinman, Joel E; Hyde, Thomas M; Rao, Nikhil; Hicks, Stephanie C; Martinowich, Keri; Jaffe, Andrew E | March 1, 2021 | Not Determined |
33521749 | Create Study | Cell-free DNA tissues of origin by methylation profiling reveals significant cell, tissue, and organ-specific injury related to COVID-19 severity. | Med (New York, N.Y.) | Cheng, Alexandre Pellan; Cheng, Matthew Pellan; Gu, Wei; Sesing Lenz, Joan; Hsu, Elaine; Schurr, Erwin; Bourque, Guillaume; Bourgey, Mathieu; Ritz, Jerome; Marty, Francisco M; Chiu, Charles Y; Vinh, Donald C; De Vlaminck, Iwijn | April 9, 2021 | Not Determined |
33513360 | Create Study | Cell-to-Cell Adhesion and Neurogenesis in Human Cortical Development: A Study Comparing 2D Monolayers with 3D Organoid Cultures. | Stem cell reports | Scuderi, Soraya; Altobelli, Giovanna G; Cimini, Vincenzo; Coppola, Gianfilippo; Vaccarino, Flora M | February 9, 2021 | Not Determined |
33471102 | Create Study | SCAN-ATAC-Sim: a scalable and efficient method for simulating single-cell ATAC-seq data from bulk-tissue experiments. | Bioinformatics (Oxford, England) | Chen, Zhanlin; Zhang, Jing; Liu, Jason; Zhang, Zixuan; Zhu, Jiangqi; Lee, Donghoon; Xu, Min; Gerstein, Mark | July 19, 2021 | Not Determined |
33422639 | Create Study | Maternal autoimmunity and inflammation are associated with childhood tics and obsessive-compulsive disorder: Transcriptomic data show common enriched innate immune pathways. | Brain, behavior, and immunity | Jones, Hannah F; Han, Velda X; Patel, Shrujna; Gloss, Brian S; Soler, Nicolette; Ho, Alvin; Sharma, Suvasini; Kothur, Kavitha; Nosadini, Margherita; Wienholt, Louise; Hardwick, Chris; Barnes, Elizabeth H; Lim, Jacqueline R; Alshammery, Sarah; Nielsen, Timothy C; Wong, Melanie; Hofer, Markus J; Nassar, Natasha; Gold, Wendy; Brilot, Fabienne; Mohammad, Shekeeb S; Dale, Russell C | May 1, 2021 | Not Determined |
33402207 | Create Study | N6-methyladenosine dynamics in neurodevelopment and aging, and its potential role in Alzheimer''s disease. | Genome biology | Shafik, Andrew M; Zhang, Feiran; Guo, Zhenxing; Dai, Qing; Pajdzik, Kinga; Li, Yangping; Kang, Yunhee; Yao, Bing; Wu, Hao; He, Chuan; Allen, Emily G; Duan, Ranhui; Jin, Peng | January 5, 2021 | Not Determined |
33398186 | Create Study | Quantum computing at the frontiers of biological sciences. | Nature methods | Emani, Prashant S; Warrell, Jonathan; Anticevic, Alan; Bekiranov, Stefan; Gandal, Michael; McConnell, Michael J; Sapiro, Guillermo; Aspuru-Guzik, Alán; Baker, Justin T; Bastiani, Matteo; Murray, John D; Sotiropoulos, Stamatios N; Taylor, Jacob; Senthil, Geetha; Lehner, Thomas; Gerstein, Mark B; Harrow, Aram W | July 1, 2021 | Not Determined |
33384012 | Create Study | Autism Spectrum Disorder Genetics and the Search for Pathological Mechanisms. | The American journal of psychiatry | Manoli, Devanand S; State, Matthew W | January 1, 2021 | Not Determined |
33376973 | Create Study | Cell-free DNA (cfDNA) and Exosome Profiling from a Year-Long Human Spaceflight Reveals Circulating Biomarkers. | iScience | Bezdan, Daniela; Grigorev, Kirill; Meydan, Cem; Pelissier Vatter, Fanny A; Cioffi, Michele; Rao, Varsha; MacKay, Matthew; Nakahira, Kiichi; Burnham, Philip; Afshinnekoo, Ebrahim; Westover, Craig; Butler, Daniel; Mozsary, Chris; Donahoe, Timothy; Foox, Jonathan; Mishra, Tejaswini; Lucotti, Serena; Rana, Brinda K; Melnick, Ari M; Zhang, Haiying; Matei, Irina; Kelsen, David; Yu, Kenneth; Lyden, David C; Taylor, Lynn; Bailey, Susan M; Snyder, Michael P; Garrett-Bakelman, Francine E; Ossowski, Stephan; De Vlaminck, Iwijn; Mason, Christopher E | December 18, 2020 | Not Determined |
33336201 | Create Study | A New Era for Space Life Science: International Standards for Space Omics Processing. | Patterns (New York, N.Y.) | Rutter, Lindsay; Barker, Richard; Bezdan, Daniela; Cope, Henry; Costes, Sylvain V; Degoricija, Lovorka; Fisch, Kathleen M; Gabitto, Mariano I; Gebre, Samrawit; Giacomello, Stefania; Gilroy, Simon; Green, Stefan J; Mason, Christopher E; Reinsch, Sigrid S; Szewczyk, Nathaniel J; Taylor, Deanne M; Galazka, Jonathan M; Herranz, Raul; Muratani, Masafumi | December 11, 2020 | Not Determined |
33319166 | Create Study | Transcriptional response modules characterize IL-1β and IL-6 activity in COVID-19. | iScience | Bell, Lucy C K; Meydan, Cem; Kim, Jacob; Foox, Jonathan; Butler, Daniel; Mason, Christopher E; Shapira, Sagi D; Noursadeghi, Mahdad; Pollara, Gabriele | January 22, 2021 | Not Determined |
33305308 | Create Study | ECMarker: interpretable machine learning model identifies gene expression biomarkers predicting clinical outcomes and reveals molecular mechanisms of human disease in early stages. | Bioinformatics (Oxford, England) | Jin, Ting; Nguyen, Nam D; Talos, Flaminia; Wang, Daifeng | May 23, 2021 | Not Determined |
33299992 | Create Study | Transcriptional response modules characterise IL-1β and IL-6 activity in COVID-19. | bioRxiv : the preprint server for biology | Bell, Lucy Ck; Meydan, Cem; Kim, Jacob; Foox, Jonathan; Butler, Daniel; Mason, Christopher E; Shapira, Sagi D; Noursadeghi, Mahdad; Pollara, Gabriele | December 3, 2020 | Not Determined |
33272361 | Create Study | Polygenicity in Psychiatry-Like It or Not, We Have to Understand It. | Biological psychiatry | Gandal, Michael J; Geschwind, Daniel H | January 1, 2021 | Not Determined |
33246552 | Create Study | Functional Genomics Identify a Regulatory Risk Variation rs4420550 in the 16p11.2 Schizophrenia-Associated Locus. | Biological psychiatry | Chang, Hong; Cai, Xin; Li, Hui-Juan; Liu, Wei-Peng; Zhao, Li-Juan; Zhang, Chu-Yi; Wang, Jun-Yang; Liu, Jie-Wei; Ma, Xiao-Lei; Wang, Lu; Yao, Yong-Gang; Luo, Xiong-Jian; Li, Ming; Xiao, Xiao | February 1, 2021 | Not Determined |
33242417 | Create Study | Comprehensive Multi-omics Analysis Reveals Mitochondrial Stress as a Central Biological Hub for Spaceflight Impact. | Cell | da Silveira, Willian A; Fazelinia, Hossein; Rosenthal, Sara Brin; Laiakis, Evagelia C; Kim, Man S; Meydan, Cem; Kidane, Yared; Rathi, Komal S; Smith, Scott M; Stear, Benjamin; Ying, Yue; Zhang, Yuanchao; Foox, Jonathan; Zanello, Susana; Crucian, Brian; Wang, Dong; Nugent, Adrienne; Costa, Helio A; Zwart, Sara R; Schrepfer, Sonja; Elworth, R A Leo; Sapoval, Nicolae; Treangen, Todd; MacKay, Matthew; Gokhale, Nandan S; Horner, Stacy M; Singh, Larry N; Wallace, Douglas C; Willey, Jeffrey S; Schisler, Jonathan C; Meller, Robert; McDonald, J Tyson; Fisch, Kathleen M; Hardiman, Gary; Taylor, Deanne; Mason, Christopher E; Costes, Sylvain V; Beheshti, Afshin | November 25, 2020 | Not Determined |
33242416 | Create Study | Fundamental Biological Features of Spaceflight: Advancing the Field to Enable Deep-Space Exploration. | Cell | Afshinnekoo, Ebrahim; Scott, Ryan T; MacKay, Matthew J; Pariset, Eloise; Cekanaviciute, Egle; Barker, Richard; Gilroy, Simon; Hassane, Duane; Smith, Scott M; Zwart, Sara R; Nelman-Gonzalez, Mayra; Crucian, Brian E; Ponomarev, Sergey A; Orlov, Oleg I; Shiba, Dai; Muratani, Masafumi; Yamamoto, Masayuki; Richards, Stephanie E; Vaishampayan, Parag A; Meydan, Cem; Foox, Jonathan; Myrrhe, Jacqueline; Istasse, Eric; Singh, Nitin; Venkateswaran, Kasthuri; Keune, Jessica A; Ray, Hami E; Basner, Mathias; Miller, Jack; Vitaterna, Martha Hotz; Taylor, Deanne M; Wallace, Douglas; Rubins, Kathleen; Bailey, Susan M; Grabham, Peter; Costes, Sylvain V; Mason, Christopher E; Beheshti, Afshin | November 25, 2020 | Not Determined |
33242410 | Create Study | Circulating miRNA Spaceflight Signature Reveals Targets for Countermeasure Development. | Cell reports | Malkani, Sherina; Chin, Christopher R; Cekanaviciute, Egle; Mortreux, Marie; Okinula, Hazeem; Tarbier, Marcel; Schreurs, Ann-Sofie; Shirazi-Fard, Yasaman; Tahimic, Candice G T; Rodriguez, Deyra N; Sexton, Brittany S; Butler, Daniel; Verma, Akanksha; Bezdan, Daniela; Durmaz, Ceyda; MacKay, Matthew; Melnick, Ari; Meydan, Cem; Li, Sheng; Garrett-Bakelman, Francine; Fromm, Bastian; Afshinnekoo, Ebrahim; Langhorst, Brad W; Dimalanta, Eileen T; Cheng-Campbell, Margareth; Blaber, Elizabeth; Schisler, Jonathan C; Vanderburg, Charles; Friedländer, Marc R; McDonald, J Tyson; Costes, Sylvain V; Rutkove, Seward; Grabham, Peter; Mason, Christopher E; Beheshti, Afshin | December 8, 2020 | Not Determined |
33242408 | Create Study | Multi-omic, Single-Cell, and Biochemical Profiles of Astronauts Guide Pharmacological Strategies for Returning to Gravity. | Cell reports | Gertz, Monica L; Chin, Christopher R; Tomoiaga, Delia; MacKay, Matthew; Chang, Christina; Butler, Daniel; Afshinnekoo, Ebrahim; Bezdan, Daniela; Schmidt, Michael A; Mozsary, Christopher; Melnick, Ari; Garrett-Bakelman, Francine; Crucian, Brian; Lee, Stuart M C; Zwart, Sara R; Smith, Scott M; Meydan, Cem; Mason, Christopher E | December 8, 2020 | Not Determined |
33158872 | Create Study | Transcriptional priming as a conserved mechanism of lineage diversification in the developing mouse and human neocortex. | Science advances | Li, Zhen; Tyler, William A; Zeldich, Ella; Santpere Baró, Gabriel; Okamoto, Mayumi; Gao, Tianliuyun; Li, Mingfeng; Sestan, Nenad; Haydar, Tarik F | November 1, 2020 | Not Determined |
33149216 | Create Study | Common schizophrenia risk variants are enriched in open chromatin regions of human glutamatergic neurons. | Nature communications | Hauberg, Mads E; Creus-Muncunill, Jordi; Bendl, Jaroslav; Kozlenkov, Alexey; Zeng, Biao; Corwin, Chuhyon; Chowdhury, Sarah; Kranz, Harald; Hurd, Yasmin L; Wegner, Michael; Børglum, Anders D; Dracheva, Stella; Ehrlich, Michelle E; Fullard, John F; Roussos, Panos | November 4, 2020 | Not Determined |
33135072 | Create Study | Complete deconvolution of DNA methylation signals from complex tissues: a geometric approach. | Bioinformatics (Oxford, England) | Zhang, Weiwei; Wu, Hao; Li, Ziyi | May 23, 2021 | Not Determined |
33131715 | Create Study | Parsing the Functional Impact of Noncoding Genetic Variants in the Brain Epigenome. | Biological psychiatry | Powell, Samuel K; O'Shea, Callan; Brennand, Kristen J; Akbarian, Schahram | January 1, 2021 | Not Determined |
33109720 | Create Study | Evolution of regulatory signatures in primate cortical neurons at cell-type resolution. | Proceedings of the National Academy of Sciences of the United States of America | Kozlenkov, Alexey; Vermunt, Marit W; Apontes, Pasha; Li, Junhao; Hao, Ke; Sherwood, Chet C; Hof, Patrick R; Ely, John J; Wegner, Michael; Mukamel, Eran A; Creyghton, Menno P; Koonin, Eugene V; Dracheva, Stella | November 10, 2020 | Not Determined |
33057013 | Create Study | Genome-wide translational profiling of amygdala Crh-expressing neurons reveals role for CREB in fear extinction learning. | Nature communications | McCullough, Kenneth M; Chatzinakos, Chris; Hartmann, Jakob; Missig, Galen; Neve, Rachael L; Fenster, Robert J; Carlezon Jr, William A; Daskalakis, Nikolaos P; Ressler, Kerry J | October 14, 2020 | Not Determined |
33046894 | Create Study | A systematic evaluation of the design and context dependencies of massively parallel reporter assays. | Nature methods | Klein, Jason C; Agarwal, Vikram; Inoue, Fumitaka; Keith, Aidan; Martin, Beth; Kircher, Martin; Ahituv, Nadav; Shendure, Jay | November 1, 2020 | Not Determined |
33046718 | Create Study | Large eQTL meta-analysis reveals differing patterns between cerebral cortical and cerebellar brain regions. | Scientific data | Sieberts, Solveig K; Perumal, Thanneer M; Carrasquillo, Minerva M; Allen, Mariet; Reddy, Joseph S; Hoffman, Gabriel E; Dang, Kristen K; Calley, John; Ebert, Philip J; Eddy, James; Wang, Xue; Greenwood, Anna K; Mostafavi, Sara; CommonMind Consortium (CMC); The AMP-AD Consortium; Omberg, Larsson; Peters, Mette A; Logsdon, Benjamin A; De Jager, Philip L; Ertekin-Taner, Nilüfer; Mangravite, Lara M | October 12, 2020 | Not Determined |
33031552 | Create Study | Varmole: a biologically drop-connect deep neural network model for prioritizing disease risk variants and genes. | Bioinformatics (Oxford, England) | Nguyen, Nam D; Jin, Ting; Wang, Daifeng | July 19, 2021 | Not Determined |
33020666 | Create Study | A unified framework for joint-tissue transcriptome-wide association and Mendelian randomization analysis. | Nature genetics | Zhou, Dan; Jiang, Yi; Zhong, Xue; Cox, Nancy J; Liu, Chunyu; Gamazon, Eric R | November 1, 2020 | Not Determined |
33012681 | Create Study | Acute Posttraumatic Symptoms Are Associated With Multimodal Neuroimaging Structural Covariance Patterns: A Possible Role for the Neural Substrates of Visual Processing in Posttraumatic Stress Disorder. | Biological psychiatry. Cognitive neuroscience and neuroimaging | Harnett, Nathaniel G; Stevens, Jennifer S; Fani, Negar; van Rooij, Sanne J H; Ely, Timothy D; Michopoulos, Vasiliki; Hudak, Lauren; Rothbaum, Alex O; Hinrichs, Rebecca; Winters, Sterling J; Jovanovic, Tanja; Rothbaum, Barbara O; Nickerson, Lisa D; Ressler, Kerry J | February 1, 2022 | Not Determined |
32998684 | Create Study | Embedding covariate adjustments in tree-based automated machine learning for biomedical big data analyses. | BMC bioinformatics | Manduchi, Elisabetta; Fu, Weixuan; Romano, Joseph D; Ruberto, Stefano; Moore, Jason H | October 1, 2020 | Not Determined |
32995783 | Create Study | Common genetic variation in humans impacts in vitro susceptibility to SARS-CoV-2 infection. | bioRxiv : the preprint server for biology | Dobrindt, Kristina; Hoagland, Daisy A; Seah, Carina; Kassim, Bibi; O'Shea, Callan P; Iskhakova, Marina; Fernando, Michael B; Deans, P J Michael; Powell, Samuel K; Javidfar, Ben; Murphy, Aleta; Peter, Cyril; Møeller, Rasmus; Garcia, Meilin Fernandez; Kimura, Masaki; Iwasawa, Kentaro; Crary, John; Kotton, Darrell N; Takebe, Takanori; Huckins, Laura M; tenOever, Benjamin R; Akbarian, Schahram; Brennand, Kristen J | September 21, 2020 | Not Determined |
32981139 | Create Study | Whole-Brain Image Analysis and Anatomical Atlas 3D Generation Using MagellanMapper. | Current protocols in neuroscience | Young, David M; Duhn, Clif; Gilson, Michael; Nojima, Mai; Yuruk, Deniz; Kumar, Aparna; Yu, Weimiao; Sanders, Stephan J | December 1, 2020 | Not Determined |
32978376 | Create Study | Integrative genomics identifies a convergent molecular subtype that links epigenomic with transcriptomic differences in autism. | Nature communications | Ramaswami, Gokul; Won, Hyejung; Gandal, Michael J; Haney, Jillian; Wang, Jerry C; Wong, Chloe C Y; Sun, Wenjie; Prabhakar, Shyam; Mill, Jonathan; Geschwind, Daniel H | September 25, 2020 | Not Determined |
32929213 | Create Study | Transcription factor POU3F2 regulates TRIM8 expression contributing to cellular functions implicated in schizophrenia. | Molecular psychiatry | Ding, Chaodong; Zhang, Chunling; Kopp, Richard; Kuney, Liz; Meng, Qingtuan; Wang, Le; Xia, Yan; Jiang, Yi; Dai, Rujia; Min, Shishi; Yao, Wei-Dong; Wong, Ma-Li; Ruan, Hongyu; Liu, Chunyu; Chen, Chao | July 1, 2021 | Not Determined |
32929078 | Create Study | Chromatin accessibility mapping of the striatum identifies tyrosine kinase FYN as a therapeutic target for heroin use disorder. | Nature communications | Egervari, Gabor; Akpoyibo, Diana; Rahman, Tanni; Fullard, John F; Callens, James E; Landry, Joseph A; Ly, Annie; Zhou, Xianxiao; Warren, Noël; Hauberg, Mads E; Hoffman, Gabriel; Ellis, Randy; Ferland, Jacqueline-Marie N; Miller, Michael L; Keller, Eva; Zhang, Bin; Roussos, Panos; Hurd, Yasmin L | September 14, 2020 | Not Determined |
32917675 | Create Study | Incomplete annotation has a disproportionate impact on our understanding of Mendelian and complex neurogenetic disorders. | Science advances | Zhang, David; Guelfi, Sebastian; Garcia-Ruiz, Sonia; Costa, Beatrice; Reynolds, Regina H; D'Sa, Karishma; Liu, Wenfei; Courtin, Thomas; Peterson, Amy; Jaffe, Andrew E; Hardy, John; Botía, Juan A; Collado-Torres, Leonardo; Ryten, Mina | June 1, 2020 | Not Determined |
32914678 | Create Study | KEOPS complex expression in the frontal cortex in major depression and schizophrenia. | The world journal of biological psychiatry : the official journal of the World Federation of Societies of Biological Psychiatry | Abel, Mackenzie E; Zhang, Xiaolu; Asah, Sophie M; Wolfinger, Alyssa; McCullumsmith, Robert E; O'Donovan, Sinead M | July 1, 2021 | Not Determined |
32864809 | Create Study | The Parkinson''s Disease Genome-Wide Association Study Locus Browser. | Movement disorders : official journal of the Movement Disorder Society | Grenn, Francis P; Kim, Jonggeol J; Makarious, Mary B; Iwaki, Hirotaka; Illarionova, Anastasia; Brolin, Kajsa; Kluss, Jillian H; Schumacher-Schuh, Artur F; Leonard, Hampton; Faghri, Faraz; Billingsley, Kimberley; Krohn, Lynne; Hall, Ashley; Diez-Fairen, Monica; Periñán, Maria Teresa; Foo, Jia Nee; Sandor, Cynthia; Webber, Caleb; Fiske, Brian K; Gibbs, J Raphael; Nalls, Mike A; Singleton, Andrew B; Bandres-Ciga, Sara; Reed, Xylena; Blauwendraat, Cornelis; International Parkinson's Disease Genomics Consortium (IPDGC) | November 1, 2020 | Not Determined |
32844198 | Create Study | Genetic variants and functional pathways associated with resilience to Alzheimer''s disease. | Brain : a journal of neurology | Dumitrescu, Logan; Mahoney, Emily R; Mukherjee, Shubhabrata; Lee, Michael L; Bush, William S; Engelman, Corinne D; Lu, Qiongshi; Fardo, David W; Trittschuh, Emily H; Mez, Jesse; Kaczorowski, Catherine; Hernandez Saucedo, Hector; Widaman, Keith F; Buckley, Rachel; Properzi, Michael; Mormino, Elizabeth; Yang, Hyun-Sik; Harrison, Tessa; Hedden, Trey; Nho, Kwangsik; Andrews, Shea J; Tommet, Doug; Hadad, Niran; Sanders, R Elizabeth; Ruderfer, Douglas M; Gifford, Katherine A; Moore, Annah M; Cambronero, Francis; Zhong, Xiaoyuan; Raghavan, Neha S; Vardarajan, Badri; Alzheimer’s Disease Neuroimaging Initiative (ADNI); Alzheimer’s Disease Genetics Consortium (ADGC), A4 Study Team; Pericak-Vance, Margaret A; Farrer, Lindsay A; Wang, Li-San; Cruchaga, Carlos; Schellenberg, Gerard; Cox, Nancy J; Haines, Jonathan L; Keene, C Dirk; Saykin, Andrew J; Larson, Eric B; Sperling, Reisa A; Mayeux, Richard; Bennett, David A; Schneider, Julie A; Crane, Paul K; Jefferson, Angela L; Hohman, Timothy J | August 1, 2020 | Not Determined |
32826963 | Create Study | Integrative analyses prioritize GNL3 as a risk gene for bipolar disorder. | Molecular psychiatry | Meng, Qingtuan; Wang, Le; Dai, Rujia; Wang, Jiawen; Ren, Zongyao; Liu, Sihan; Xia, Yan; Jiang, Yi; Duan, Fangyuan; Wang, Kangli; Liu, Chunyu; Chen, Chao | November 1, 2020 | Not Determined |
32820257 | Create Study | The COVID-19 XPRIZE and the need for scalable, fast, and widespread testing. | Nature biotechnology | MacKay, Matthew J; Hooker, Anna C; Afshinnekoo, Ebrahim; Salit, Marc; Kelly, Jason; Feldstein, Jonathan V; Haft, Nick; Schenkel, Doug; Nambi, Subhalaxmi; Cai, Yizhi; Zhang, Feng; Church, George; Dai, Junbiao; Wang, Cliff L; Levy, Shawn; Huber, Jeff; Ji, Hanlee P; Kriegel, Alison; Wyllie, Anne L; Mason, Christopher E | September 1, 2020 | Not Determined |
32792264 | Create Study | Transcriptomic Insight Into the Polygenic Mechanisms Underlying Psychiatric Disorders. | Biological psychiatry | Hernandez, Leanna M; Kim, Minsoo; Hoftman, Gil D; Haney, Jillian R; de la Torre-Ubieta, Luis; Pasaniuc, Bogdan; Gandal, Michael J | January 1, 2021 | Not Determined |
32791513 | Create Study | Independent replications and integrative analyses confirm TRANK1 as a susceptibility gene for bipolar disorder. | Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology | Li, Wenqiang; Cai, Xin; Li, Hui-Juan; Song, Meng; Zhang, Chu-Yi; Yang, Yongfeng; Zhang, Luwen; Zhao, Lijuan; Liu, Weipeng; Wang, Lu; Shao, Minglong; Zhang, Yan; Zhang, Chen; Cai, Jun; Zhou, Dong-Sheng; Li, Xingxing; Hui, Li; Jia, Qiu-Fang; Qu, Na; Zhong, Bao-Liang; Zhang, Shu-Fang; Chen, Jing; Xia, Bin; Li, Yi; Song, Xueqin; Fan, Weixing; Tang, Wei; Tang, Wenxin; Tang, Jinsong; Chen, Xiaogang; Yue, Weihua; Zhang, Dai; Fang, Yiru; Xiao, Xiao; Li, Ming; Lv, Luxian; Chang, Hong | May 1, 2021 | Not Determined |
32755589 | Create Study | RGS6 Mediates Effects of Voluntary Running on Adult Hippocampal Neurogenesis. | Cell reports | Gao, Yu; Shen, Minjie; Gonzalez, Jose Carlos; Dong, Qiping; Kannan, Sudharsan; Hoang, Johnson T; Eisinger, Brian E; Pandey, Jyotsna; Javadi, Sahar; Chang, Qiang; Wang, Daifeng; Overstreet-Wadiche, Linda; Zhao, Xinyu | August 4, 2020 | Not Determined |
32747830 | Create Study | Immune complement and coagulation dysfunction in adverse outcomes of SARS-CoV-2 infection. | Nature medicine | Ramlall, Vijendra; Thangaraj, Phyllis M; Meydan, Cem; Foox, Jonathan; Butler, Daniel; Kim, Jacob; May, Ben; De Freitas, Jessica K; Glicksberg, Benjamin S; Mason, Christopher E; Tatonetti, Nicholas P; Shapira, Sagi D | October 1, 2020 | Not Determined |
32730587 | Create Study | Dream: powerful differential expression analysis for repeated measures designs. | Bioinformatics (Oxford, England) | Hoffman, Gabriel E; Roussos, Panos | April 19, 2021 | Not Determined |
32727537 | Create Study | RADAR: annotation and prioritization of variants in the post-transcriptional regulome of RNA-binding proteins. | Genome biology | Zhang, Jing; Liu, Jason; Lee, Donghoon; Feng, Jo-Jo; Lochovsky, Lucas; Lou, Shaoke; Rutenberg-Schoenberg, Michael; Gerstein, Mark | July 30, 2020 | Not Determined |
32723400 | Create Study | Integrative omics analysis identifies differential biological pathways that are associated with regional grey matter volume changes in major depressive disorder. | Psychological medicine | Sha, Zhiqiang; Banihashemi, Layla | April 1, 2022 | Not Determined |
32714365 | Create Study | Impute.me: An Open-Source, Non-profit Tool for Using Data From Direct-to-Consumer Genetic Testing to Calculate and Interpret Polygenic Risk Scores. | Frontiers in genetics | Folkersen, Lasse; Pain, Oliver; Ingason, Andrés; Werge, Thomas; Lewis, Cathryn M; Austin, Jehannine | January 1, 2020 | Not Determined |
32707082 | Create Study | Neural Stem Cells Direct Axon Guidance via Their Radial Fiber Scaffold. | Neuron | Kaur, Navjot; Han, Wenqi; Li, Zhuo; Madrigal, M Pilar; Shim, Sungbo; Pochareddy, Sirisha; Gulden, Forrest O; Li, Mingfeng; Xu, Xuming; Xing, Xiaojun; Takeo, Yutaka; Li, Zhen; Lu, Kangrong; Imamura Kawasawa, Yuka; Ballester-Lurbe, Begoña; Moreno-Bravo, Juan Antonio; Chédotal, Alain; Terrado, José; Pérez-Roger, Ignacio; Koleske, Anthony J; Sestan, Nenad | September 23, 2020 | Not Determined |
32679108 | Create Study | Tumor Microenvironment-Derived NRG1 Promotes Antiandrogen Resistance in Prostate Cancer. | Cancer cell | Zhang, Zeda; Karthaus, Wouter R; Lee, Young Sun; Gao, Vianne R; Wu, Chao; Russo, Joshua W; Liu, Menghan; Mota, Jose Mauricio; Abida, Wassim; Linton, Eliot; Lee, Eugine; Barnes, Spencer D; Chen, Hsuan-An; Mao, Ninghui; Wongvipat, John; Choi, Danielle; Chen, Xiaoping; Zhao, Huiyong; Manova-Todorova, Katia; de Stanchina, Elisa; Taplin, Mary-Ellen; Balk, Steven P; Rathkopf, Dana E; Gopalan, Anuradha; Carver, Brett S; Mu, Ping; Jiang, Xuejun; Watson, Philip A; Sawyers, Charles L | August 10, 2020 | Not Determined |
32668441 | Create Study | Leveraging large genomic datasets to illuminate the pathobiology of autism spectrum disorders. | Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology | Searles Quick, Veronica B; Wang, Belinda; State, Matthew W | January 1, 2021 | Not Determined |
32659782 | Create Study | PsychENCODE and beyond: transcriptomics and epigenomics of brain development and organoids. | Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology | Jourdon, Alexandre; Scuderi, Soraya; Capauto, Davide; Abyzov, Alexej; Vaccarino, Flora M | January 1, 2021 | Not Determined |
32641802 | Create Study | lentiMPRA and MPRAflow for high-throughput functional characterization of gene regulatory elements. | Nature protocols | Gordon, M Grace; Inoue, Fumitaka; Martin, Beth; Schubach, Max; Agarwal, Vikram; Whalen, Sean; Feng, Shiyun; Zhao, Jingjing; Ashuach, Tal; Ziffra, Ryan; Kreimer, Anat; Georgakopoulos-Soares, Ilias; Yosef, Nir; Ye, Chun Jimmie; Pollard, Katherine S; Shendure, Jay; Kircher, Martin; Ahituv, Nadav | August 1, 2020 | Not Determined |
32640236 | Create Study | Integrated Transcriptome and Network Analysis Reveals Spatiotemporal Dynamics of Calvarial Suturogenesis. | Cell reports | Holmes, Greg; Gonzalez-Reiche, Ana S; Lu, Na; Zhou, Xianxiao; Rivera, Joshua; Kriti, Divya; Sebra, Robert; Williams, Anthony A; Donovan, Michael J; Potter, S Steven; Pinto, Dalila; Zhang, Bin; van Bakel, Harm; Jabs, Ethylin Wang | July 7, 2020 | Not Determined |
32634676 | Create Study | Functional genomics links genetic origins to pathophysiology in neurodegenerative and neuropsychiatric disease. | Current opinion in genetics & development | Wamsley, Brie; Geschwind, Daniel H | December 1, 2020 | Not Determined |
32632206 | Create Study | Older molecular brain age in severe mental illness. | Molecular psychiatry | Lin, Chien-Wei; Chang, Lun-Ching; Ma, Tianzhou; Oh, Hyunjung; French, Beverly; Puralewski, Rachel; Mathews, Fasil; Fang, Yusi; Lewis, David A; Kennedy, James L; Mueller, Daniel; Marshe, Victoria S; Jaffe, Andrew; Chen, Qiang; Ursini, Gianluca; Weinberger, Daniel; Newman, Anne B; Lenze, Eric J; Nikolova, Yuliya S; Tseng, George C; Sibille, Etienne | July 1, 2021 | Not Determined |
32619508 | Create Study | One for All: A Pooled Approach to Classify Functional Impacts of Multiple Mutations. | Cell stem cell | Jourdon, Alexandre; Vaccarino, Flora M | July 2, 2020 | Not Determined |
32610082 | Create Study | A Chromatin Accessibility Atlas of the Developing Human Telencephalon. | Cell | Markenscoff-Papadimitriou, Eirene; Whalen, Sean; Przytycki, Pawel; Thomas, Reuben; Binyameen, Fadya; Nowakowski, Tomasz J; Kriegstein, Arnold R; Sanders, Stephan J; State, Matthew W; Pollard, Katherine S; Rubenstein, John L | August 6, 2020 | Not Determined |
32609087 | Create Study | Homeostatic plasticity fails at the intersection of autism-gene mutations and a novel class of common genetic modifiers. | eLife | Genç, Özgür; An, Joon-Yong; Fetter, Richard D; Kulik, Yelena; Zunino, Giulia; Sanders, Stephan J; Davis, Graeme W | July 1, 2020 | Not Determined |
32602773 | Create Study | Characterizing the dynamic and functional DNA methylation landscape in the developing human cortex. | Epigenetics | Perzel Mandell, Kira A; Price, Amanda J; Wilton, Richard; Collado-Torres, Leonardo; Tao, Ran; Eagles, Nicholas J; Szalay, Alexander S; Hyde, Thomas M; Weinberger, Daniel R; Kleinman, Joel E; Jaffe, Andrew E | January 1, 2021 | Not Determined |
32578147 | Create Study | Investigation of Schizophrenia with Human Induced Pluripotent Stem Cells. | Advances in neurobiology | Powell, Samuel K; O'Shea, Callan P; Shannon, Sara Rose; Akbarian, Schahram; Brennand, Kristen J | January 1, 2020 | Not Determined |
32561500 | Create Study | Identification of Radioresponsive Genes in Esophageal Cancer from Longitudinal and Single Cell Exome Sequencing. | International journal of radiation oncology, biology, physics | Yang, Ling; Zhang, Xiaoyan; MacKay, Matthew; Foox, Jonathan; Hou, Qiang; Zheng, Xiaoli; Zhou, Rongjing; Huang, Ming; Jing, Zhao; Mason, Christopher E; Wu, Shixiu | November 15, 2020 | Not Determined |
32553197 | Create Study | The Bidirectional Relationship of Depression and Inflammation: Double Trouble. | Neuron | Beurel, Eléonore; Toups, Marisa; Nemeroff, Charles B | July 22, 2020 | Not Determined |
32533064 | Create Study | Functional annotation of rare structural variation in the human brain. | Nature communications | Han, Lide; Zhao, Xuefang; Benton, Mary Lauren; Perumal, Thaneer; Collins, Ryan L; Hoffman, Gabriel E; Johnson, Jessica S; Sloofman, Laura; Wang, Harold Z; Stone, Matthew R; CommonMind Consortium; Brennand, Kristen J; Brand, Harrison; Sieberts, Solveig K; Marenco, Stefano; Peters, Mette A; Lipska, Barbara K; Roussos, Panos; Capra, John A; Talkowski, Michael; Ruderfer, Douglas M | June 12, 2020 | Not Determined |
32511494 | Create Study | Identification of Immune complement function as a determinant of adverse SARS-CoV-2 infection outcome. | medRxiv : the preprint server for health sciences | Ramlall, Vijendra; Thangaraj, Phyllis M; Meydan, Cem; Foox, Jonathan; Butler, Daniel; May, Ben; De Freitas, Jessica K; Glicksberg, Benjamin S; Mason, Christopher E; Tatonetti, Nicholas P; Shapira, Sagi D | June 6, 2020 | Not Determined |
32511352 | Create Study | Shotgun Transcriptome and Isothermal Profiling of SARS-CoV-2 Infection Reveals Unique Host Responses, Viral Diversification, and Drug Interactions. | bioRxiv : the preprint server for biology | Butler, Daniel J; Mozsary, Christopher; Meydan, Cem; Danko, David; Foox, Jonathan; Rosiene, Joel; Shaiber, Alon; Afshinnekoo, Ebrahim; MacKay, Matthew; Sedlazeck, Fritz J; Ivanov, Nikolay A; Sierra, Maria; Pohle, Diana; Zietz, Michael; Gisladottir, Undina; Ramlall, Vijendra; Westover, Craig D; Ryon, Krista; Young, Benjamin; Bhattacharya, Chandrima; Ruggiero, Phyllis; Langhorst, Bradley W; Tanner, Nathan; Gawrys, Justyna; Meleshko, Dmitry; Xu, Dong; Steel, Peter A D; Shemesh, Amos J; Xiang, Jenny; Thierry-Mieg, Jean; Thierry-Mieg, Danielle; Schwartz, Robert E; Iftner, Angelika; Bezdan, Daniela; Sipley, John; Cong, Lin; Craney, Arryn; Velu, Priya; Melnick, Ari M; Hajirasouliha, Iman; Horner, Stacy M; Iftner, Thomas; Salvatore, Mirella; Loda, Massimo; Westblade, Lars F; Cushing, Melissa; Levy, Shawn; Wu, Shixiu; Tatonetti, Nicholas; Imielinski, Marcin; Rennert, Hanna; Mason, Christopher E | May 1, 2020 | Not Determined |
32492425 | Create Study | Analysis of Genetically Regulated Gene Expression Identifies a Prefrontal PTSD Gene, SNRNP35, Specific to Military Cohorts. | Cell reports | Huckins, Laura M; Chatzinakos, Chris; Breen, Michael S; Hartmann, Jakob; Klengel, Torsten; da Silva Almeida, Ana C; Dobbyn, Amanda; Girdhar, Kiran; Hoffman, Gabriel E; Klengel, Claudia; Logue, Mark W; Lori, Adriana; Maihofer, Adam X; Morrison, Filomene G; Nguyen, Hoang T; Park, Yongjin; Ruderfer, Douglas; Sloofman, Laura G; van Rooij, Sanne J H; PTSD Working Group of Psychiatric Genomics Consortium; Baker, Dewleen G; Chen, Chia-Yen; Cox, Nancy; Duncan, Laramie E; Geyer, Mark A; Glatt, Stephen J; Im, Hae Kyung; Risbrough, Victoria B; Smoller, Jordan W; Stein, Dan J; Yehuda, Rachel; Liberzon, Israel; Koenen, Karestan C; Jovanovic, Tanja; Kellis, Manolis; Miller, Mark W; Bacanu, Silviu-Alin; Nievergelt, Caroline M; Buxbaum, Joseph D; Sklar, Pamela; Ressler, Kerry J; Stahl, Eli A; Daskalakis, Nikolaos P | June 2, 2020 | Not Determined |
32424284 | Create Study | Shared proteomic effects of cerebral atherosclerosis and Alzheimer''s disease on the human brain. | Nature neuroscience | Wingo, Aliza P; Fan, Wen; Duong, Duc M; Gerasimov, Ekaterina S; Dammer, Eric B; Liu, Yue; Harerimana, Nadia V; White, Bartholomew; Thambisetty, Madhav; Troncoso, Juan C; Kim, Namhee; Schneider, Julie A; Hajjar, Ihab M; Lah, James J; Bennett, David A; Seyfried, Nicholas T; Levey, Allan I; Wingo, Thomas S | June 1, 2020 | Not Determined |
32404946 | Create Study | Cortical cellular diversity and development in schizophrenia. | Molecular psychiatry | Price, Amanda J; Jaffe, Andrew E; Weinberger, Daniel R | January 1, 2021 | Not Determined |
32375154 | Create Study | The NASA Twins Study: The Effect of One Year in Space on Long-Chain Fatty Acid Desaturases and Elongases. | Lifestyle genomics | Schmidt, Michael A; Meydan, Cem; Schmidt, Caleb M; Afshinnekoo, Ebrahim; Mason, Christopher E | January 1, 2020 | Not Determined |
32375049 | Create Study | Variation of Human Neural Stem Cells Generating Organizer States In Vitro before Committing to Cortical Excitatory or Inhibitory Neuronal Fates. | Cell reports | Micali, Nicola; Kim, Suel-Kee; Diaz-Bustamante, Marcelo; Stein-O'Brien, Genevieve; Seo, Seungmae; Shin, Joo-Heon; Rash, Brian G; Ma, Shaojie; Wang, Yanhong; Olivares, Nicolas A; Arellano, Jon I; Maynard, Kristen R; Fertig, Elana J; Cross, Alan J; Bürli, Roland W; Brandon, Nicholas J; Weinberger, Daniel R; Chenoweth, Joshua G; Hoeppner, Daniel J; Sestan, Nenad; Rakic, Pasko; Colantuoni, Carlo; McKay, Ronald D | May 5, 2020 | Not Determined |
32317787 | Create Study | A framework for an evidence-based gene list relevant to autism spectrum disorder. | Nature reviews. Genetics | Schaaf, Christian P; Betancur, Catalina; Yuen, Ryan K C; Parr, Jeremy R; Skuse, David H; Gallagher, Louise; Bernier, Raphael A; Buchanan, Janet A; Buxbaum, Joseph D; Chen, Chun-An; Dies, Kira A; Elsabbagh, Mayada; Firth, Helen V; Frazier, Thomas; Hoang, Ny; Howe, Jennifer; Marshall, Christian R; Michaud, Jacques L; Rennie, Olivia; Szatmari, Peter; Chung, Wendy K; Bolton, Patrick F; Cook, Edwin H; Scherer, Stephen W; Vorstman, Jacob A S | June 1, 2020 | Not Determined |
32313079 | Create Study | Limits in the detection of m6A changes using MeRIP/m6A-seq. | Scientific reports | McIntyre, Alexa B R; Gokhale, Nandan S; Cerchietti, Leandro; Jaffrey, Samie R; Horner, Stacy M; Mason, Christopher E | April 20, 2020 | Not Determined |
32299488 | Create Study | Human in vitro models for understanding mechanisms of autism spectrum disorder. | Molecular autism | Gordon, Aaron; Geschwind, Daniel H | April 16, 2020 | Not Determined |
32282793 | Create Study | DRAMS: A tool to detect and re-align mixed-up samples for integrative studies of multi-omics data. | PLoS computational biology | Jiang, Yi; Giase, Gina; Grennan, Kay; Shieh, Annie W; Xia, Yan; Han, Lide; Wang, Quan; Wei, Qiang; Chen, Rui; Liu, Sihan; White, Kevin P; Chen, Chao; Li, Bingshan; Liu, Chunyu | April 1, 2020 | Not Determined |
32268104 | Create Study | Whole-Genome and RNA Sequencing Reveal Variation and Transcriptomic Coordination in the Developing Human Prefrontal Cortex. | Cell reports | Werling, Donna M; Pochareddy, Sirisha; Choi, Jinmyung; An, Joon-Yong; Sheppard, Brooke; Peng, Minshi; Li, Zhen; Dastmalchi, Claudia; Santpere, Gabriel; Sousa, André M M; Tebbenkamp, Andrew T N; Kaur, Navjot; Gulden, Forrest O; Breen, Michael S; Liang, Lindsay; Gilson, Michael C; Zhao, Xuefang; Dong, Shan; Klei, Lambertus; Cicek, A Ercument; Buxbaum, Joseph D; Adle-Biassette, Homa; Thomas, Jean-Leon; Aldinger, Kimberly A; O'Day, Diana R; Glass, Ian A; Zaitlen, Noah A; Talkowski, Michael E; Roeder, Kathryn; State, Matthew W; Devlin, Bernie; Sanders, Stephan J; Sestan, Nenad | April 7, 2020 | Not Determined |
32240163 | Create Study | Multiview learning for understanding functional multiomics. | PLoS computational biology | Nguyen, Nam D; Wang, Daifeng | April 1, 2020 | Not Determined |
32220301 | Create Study | Loss of CHD1 Promotes Heterogeneous Mechanisms of Resistance to AR-Targeted Therapy via Chromatin Dysregulation. | Cancer cell | Zhang, Zeda; Zhou, Chuanli; Li, Xiaoling; Barnes, Spencer D; Deng, Su; Hoover, Elizabeth; Chen, Chi-Chao; Lee, Young Sun; Zhang, Yanxiao; Wang, Choushi; Metang, Lauren A; Wu, Chao; Tirado, Carla Rodriguez; Johnson, Nickolas A; Wongvipat, John; Navrazhina, Kristina; Cao, Zhen; Choi, Danielle; Huang, Chun-Hao; Linton, Eliot; Chen, Xiaoping; Liang, Yupu; Mason, Christopher E; de Stanchina, Elisa; Abida, Wassim; Lujambio, Amaia; Li, Sheng; Lowe, Scott W; Mendell, Joshua T; Malladi, Venkat S; Sawyers, Charles L; Mu, Ping | April 13, 2020 | Not Determined |
32184385 | Create Study | Further confirmation of netrin 1 receptor (DCC) as a depression risk gene via integrations of multi-omics data. | Translational psychiatry | Li, Hui-Juan; Qu, Na; Hui, Li; Cai, Xin; Zhang, Chu-Yi; Zhong, Bao-Liang; Zhang, Shu-Fang; Chen, Jing; Xia, Bin; Wang, Lu; Jia, Qiu-Fang; Li, Wei; Chang, Hong; Xiao, Xiao; Li, Ming; Li, Yi | March 17, 2020 | Not Determined |
32167531 | Create Study | Robust partial reference-free cell composition estimation from tissue expression. | Bioinformatics (Oxford, England) | Li, Ziyi; Guo, Zhenxing; Cheng, Ying; Jin, Peng; Wu, Hao | June 1, 2020 | Not Determined |
32143829 | Create Study | Gene Expression in Patient-Derived Neural Progenitors Implicates WNT5A Signaling in the Etiology of Schizophrenia. | Biological psychiatry | Evgrafov, Oleg V; Armoskus, Chris; Wrobel, Bozena B; Spitsyna, Valeria N; Souaiaia, Tade; Herstein, Jennifer S; Walker, Christopher P; Nguyen, Joseph D; Camarena, Adrian; Weitz, Jonathan R; Kim, Jae Mun Hugo; Lopez Duarte, Edder; Wang, Kai; Simpson, George M; Sobell, Janet L; Medeiros, Helena; Pato, Michele T; Pato, Carlos N; Knowles, James A | August 1, 2020 | Not Determined |
32114783 | Create Study | Translating Across Circuits and Genetics Toward Progress in Fear- and Anxiety-Related Disorders. | The American journal of psychiatry | Ressler, Kerry J | March 1, 2020 | Not Determined |
32081027 | Create Study | Dynamic N6-methyladenosine RNA methylation in brain and diseases. | Epigenomics | Shafik, Andrew M; Allen, Emily G; Jin, Peng | February 1, 2020 | Not Determined |
32079618 | Create Study | Recounting the FANTOM CAGE-Associated Transcriptome. | Genome research | Imada, Eddie Luidy; Sanchez, Diego Fernando; Collado-Torres, Leonardo; Wilks, Christopher; Matam, Tejasvi; Dinalankara, Wikum; Stupnikov, Aleksey; Lobo-Pereira, Francisco; Yip, Chi-Wai; Yasuzawa, Kayoko; Kondo, Naoto; Itoh, Masayoshi; Suzuki, Harukazu; Kasukawa, Takeya; Hon, Chung-Chau; de Hoon, Michiel J L; Shin, Jay W; Carninci, Piero; Jaffe, Andrew E; Leek, Jeffrey T; Favorov, Alexander; Franco, Gloria R; Langmead, Ben; Marchionni, Luigi | July 1, 2020 | Not Determined |
32075678 | Create Study | A chromosomal connectome for psychiatric and metabolic risk variants in adult dopaminergic neurons. | Genome medicine | Espeso-Gil, Sergio; Halene, Tobias; Bendl, Jaroslav; Kassim, Bibi; Ben Hutta, Gabriella; Iskhakova, Marina; Shokrian, Neda; Auluck, Pavan; Javidfar, Behnam; Rajarajan, Prashanth; Chandrasekaran, Sandhya; Peter, Cyril J; Cote, Alanna; Birnbaum, Rebecca; Liao, Will; Borrman, Tyler; Wiseman, Jennifer; Bell, Aaron; Bannon, Michael J; Roussos, Panagiotis; Crary, John F; Weng, Zhiping; Marenco, Stefano; Lipska, Barbara; Tsankova, Nadejda M; Huckins, Laura; Jiang, Yan; Akbarian, Schahram | February 19, 2020 | Not Determined |
32033924 | Create Study | Nervous and Endocrine System Dysfunction in Posttraumatic Stress Disorder: An Overview and Consideration of Sex as a Biological Variable. | Biological psychiatry. Cognitive neuroscience and neuroimaging | Seligowski, Antonia V; Harnett, Nathaniel G; Merker, Julia B; Ressler, Kerry J | April 1, 2020 | Not Determined |
32003784 | Create Study | decorate: differential epigenetic correlation test. | Bioinformatics (Oxford, England) | Hoffman, Gabriel E; Bendl, Jaroslav; Girdhar, Kiran; Roussos, Panos | May 1, 2020 | Not Determined |
31981491 | Create Study | Large-Scale Exome Sequencing Study Implicates Both Developmental and Functional Changes in the Neurobiology of Autism. | Cell | Satterstrom, F Kyle; Kosmicki, Jack A; Wang, Jiebiao; Breen, Michael S; De Rubeis, Silvia; An, Joon-Yong; Peng, Minshi; Collins, Ryan; Grove, Jakob; Klei, Lambertus; Stevens, Christine; Reichert, Jennifer; Mulhern, Maureen S; Artomov, Mykyta; Gerges, Sherif; Sheppard, Brooke; Xu, Xinyi; Bhaduri, Aparna; Norman, Utku; Brand, Harrison; Schwartz, Grace; Nguyen, Rachel; Guerrero, Elizabeth E; Dias, Caroline; Autism Sequencing Consortium; iPSYCH-Broad Consortium; Betancur, Catalina; Cook, Edwin H; Gallagher, Louise; Gill, Michael; Sutcliffe, James S; Thurm, Audrey; Zwick, Michael E; Børglum, Anders D; State, Matthew W; Cicek, A Ercument; Talkowski, Michael E; Cutler, David J; Devlin, Bernie; Sanders, Stephan J; Roeder, Kathryn; Daly, Mark J; Buxbaum, Joseph D | February 6, 2020 | Not Determined |
31949163 | Create Study | Autism spectrum disorder. | Nature reviews. Disease primers | Lord, Catherine; Brugha, Traolach S; Charman, Tony; Cusack, James; Dumas, Guillaume; Frazier, Thomas; Jones, Emily J H; Jones, Rebecca M; Pickles, Andrew; State, Matthew W; Taylor, Julie Lounds; Veenstra-VanderWeele, Jeremy | January 16, 2020 | Not Determined |
31907405 | Create Study | The therapeutic landscape for cells engineered with chimeric antigen receptors. | Nature biotechnology | MacKay, Matthew; Afshinnekoo, Ebrahim; Rub, Jonathan; Hassan, Ciaran; Khunte, Mihir; Baskaran, Nithyashri; Owens, Bryan; Liu, Lauren; Roboz, Gail J; Guzman, Monica L; Melnick, Ari M; Wu, Shixiu; Mason, Christopher E | February 1, 2020 | Not Determined |
31886035 | Create Study | Translating current biomedical therapies for long duration, deep space missions. | Precision clinical medicine | Iosim, Sonia; MacKay, Matthew; Westover, Craig; Mason, Christopher E | December 1, 2019 | Not Determined |
31857689 | Create Study | Altered white matter microstructural organization in posttraumatic stress disorder across 3047 adults: results from the PGC-ENIGMA PTSD consortium. | Molecular psychiatry | Dennis, Emily L; Disner, Seth G; Fani, Negar; Salminen, Lauren E; Logue, Mark; Clarke, Emily K; Haswell, Courtney C; Averill, Christopher L; Baugh, Lee A; Bomyea, Jessica; Bruce, Steven E; Cha, Jiook; Choi, Kyle; Davenport, Nicholas D; Densmore, Maria; du Plessis, Stefan; Forster, Gina L; Frijling, Jessie L; Gonenc, Atilla; Gruber, Staci; Grupe, Daniel W; Guenette, Jeffrey P; Hayes, Jasmeet; Hofmann, David; Ipser, Jonathan; Jovanovic, Tanja; Kelly, Sinead; Kennis, Mitzy; Kinzel, Philipp; Koch, Saskia B J; Koerte, Inga; Koopowitz, Sheri; Korgaonkar, Mayuresh; Krystal, John; Lebois, Lauren A M; Li, Gen; Magnotta, Vincent A; Manthey, Antje; May, Geoff J; Menefee, Deleene S; Nawijn, Laura; Nelson, Steven M; Neufeld, Richard W J; Nitschke, Jack B; O'Doherty, Daniel; Peverill, Matthew; Ressler, Kerry J; Roos, Annerine; Sheridan, Margaret A; Sierk, Anika; Simmons, Alan; Simons, Raluca M; Simons, Jeffrey S; Stevens, Jennifer; Suarez-Jimenez, Benjamin; Sullivan, Danielle R; Théberge, Jean; Tran, Jana K; van den Heuvel, Leigh; van der Werff, Steven J A; van Rooij, Sanne J H; van Zuiden, Mirjam; Velez, Carmen; Verfaellie, Mieke; Vermeiren, Robert R J M; Wade, Benjamin S C; Wager, Tor; Walter, Henrik; Winternitz, Sherry; Wolff, Jonathan; York, Gerald; Zhu, Ye; Zhu, Xi; Abdallah, Chadi G; Bryant, Richard; Daniels, Judith K; Davidson, Richard J; Fercho, Kelene A; Franz, Carol; Geuze, Elbert; Gordon, Evan M; Kaufman, Milissa L; Kremen, William S; Lagopoulos, Jim; Lanius, Ruth A; Lyons, Michael J; McCauley, Stephen R; McGlinchey, Regina; McLaughlin, Katie A; Milberg, William; Neria, Yuval; Olff, Miranda; Seedat, Soraya; Shenton, Martha; Sponheim, Scott R; Stein, Dan J; Stein, Murray B; Straube, Thomas; Tate, David F; van der Wee, Nic J A; Veltman, Dick J; Wang, Li; Wilde, Elisabeth A; Thompson, Paul M; Kochunov, Peter; Jahanshad, Neda; Morey, Rajendra A | August 1, 2021 | Not Determined |
31852722 | Create Study | Characterizing the nuclear and cytoplasmic transcriptomes in developing and mature human cortex uncovers new insight into psychiatric disease gene regulation. | Genome research | Price, Amanda J; Hwang, Taeyoung; Tao, Ran; Burke, Emily E; Rajpurohit, Anandita; Shin, Joo Heon; Hyde, Thomas M; Kleinman, Joel E; Jaffe, Andrew E; Weinberger, Daniel R | January 1, 2020 | Not Determined |
31819045 | Create Study | The depression GWAS risk allele predicts smaller cerebellar gray matter volume and reduced SIRT1 mRNA expression in Chinese population. | Translational psychiatry | Liu, Weipeng; Yan, Hao; Zhou, Danyang; Cai, Xin; Zhang, Yuyanan; Li, Shiyi; Li, Huijuan; Li, Shiwu; Zhou, Dong-Sheng; Li, Xingxing; Zhang, Chen; Sun, Yan; Dai, Jia-Pei; Zhong, Jingmei; Yao, Yong-Gang; Luo, Xiong-Jian; Fang, Yiru; Zhang, Dai; Ma, Yina; Yue, Weihua; Li, Ming; Xiao, Xiao | December 9, 2019 | Not Determined |
31810760 | Create Study | Altered m6A Modification of Specific Cellular Transcripts Affects Flaviviridae Infection. | Molecular cell | Gokhale, Nandan S; McIntyre, Alexa B R; Mattocks, Melissa D; Holley, Christopher L; Lazear, Helen M; Mason, Christopher E; Horner, Stacy M | February 6, 2020 | Not Determined |
31788036 | Create Study | Alu insertion polymorphisms shared by Papio baboons and Theropithecus gelada reveal an intertwined common ancestry. | Mobile DNA | Walker, Jerilyn A; Jordan, Vallmer E; Storer, Jessica M; Steely, Cody J; Gonzalez-Quiroga, Paulina; Beckstrom, Thomas O; Rewerts, Lydia C; St Romain, Corey P; Rockwell, Catherine E; Rogers, Jeffrey; Jolly, Clifford J; Konkel, Miriam K; Baboon Genome Analysis Consortium; Batzer, Mark A | January 1, 2019 | Not Determined |
31778651 | Create Study | Modeling the Evolution of Human Brain Development Using Organoids. | Cell | Muchnik, Sydney Keaton; Lorente-Galdos, Belen; Santpere, Gabriel; Sestan, Nenad | November 27, 2019 | Not Determined |
31631012 | Create Study | Identification and Massively Parallel Characterization of Regulatory Elements Driving Neural Induction. | Cell stem cell | Inoue, Fumitaka; Kreimer, Anat; Ashuach, Tal; Ahituv, Nadav; Yosef, Nir | November 7, 2019 | Not Determined |
31626773 | Create Study | Genetic Control of Expression and Splicing in Developing Human Brain Informs Disease Mechanisms. | Cell | Walker, Rebecca L; Ramaswami, Gokul; Hartl, Christopher; Mancuso, Nicholas; Gandal, Michael J; de la Torre-Ubieta, Luis; Pasaniuc, Bogdan; Stein, Jason L; Geschwind, Daniel H | October 17, 2019 | Not Determined |
31608310 | Create Study | Psychiatric Genetics, Epigenetics, and Cellular Models in Coming Years. | Journal of psychiatry and brain science | Liu, Chunyu; Faraone, Stephen V; Glatt, Stephen J | January 1, 2019 | Not Determined |
31599933 | Create Study | Evaluating Chromatin Accessibility Differences Across Multiple Primate Species Using a Joint Modeling Approach. | Genome biology and evolution | Edsall, Lee E; Berrio, Alejandro; Majoros, William H; Swain-Lenz, Devjanee; Morrow, Shauna; Shibata, Yoichiro; Safi, Alexias; Wray, Gregory A; Crawford, Gregory E; Allen, Andrew S | October 1, 2019 | Not Determined |
31563948 | Create Study | Melanin Concentrating Hormone Signaling Deficits in Schizophrenia: Association With Memory and Social Impairments and Abnormal Sensorimotor Gating. | The international journal of neuropsychopharmacology | Vawter, Marquis P; Schulmann, Anton; Alhassen, Lamees; Alhassen, Wedad; Hamzeh, Abdul Rezzak; Sakr, Jasmine; Pauluk, Lucas; Yoshimura, Ryan; Wang, Xuejie; Dai, Qi; Sanathara, Nayna; Civelli, Olivier; Alachkar, Amal | March 10, 2020 | Not Determined |
31554518 | Create Study | Divergent neuronal DNA methylation patterns across human cortical development reveal critical periods and a unique role of CpH methylation. | Genome biology | Price, Amanda J; Collado-Torres, Leonardo; Ivanov, Nikolay A; Xia, Wei; Burke, Emily E; Shin, Joo Heon; Tao, Ran; Ma, Liang; Jia, Yankai; Hyde, Thomas M; Kleinman, Joel E; Weinberger, Daniel R; Jaffe, Andrew E | September 26, 2019 | Not Determined |
31551426 | Create Study | CommonMind Consortium provides transcriptomic and epigenomic data for Schizophrenia and Bipolar Disorder. | Scientific data | Hoffman, Gabriel E; Bendl, Jaroslav; Voloudakis, Georgios; Montgomery, Kelsey S; Sloofman, Laura; Wang, Ying-Chih; Shah, Hardik R; Hauberg, Mads E; Johnson, Jessica S; Girdhar, Kiran; Song, Lingyun; Fullard, John F; Kramer, Robin; Hahn, Chang-Gyu; Gur, Raquel; Marenco, Stefano; Lipska, Barbara K; Lewis, David A; Haroutunian, Vahram; Hemby, Scott; Sullivan, Patrick; Akbarian, Schahram; Chess, Andrew; Buxbaum, Joseph D; Crawford, Greg E; Domenici, Enrico; Devlin, Bernie; Sieberts, Solveig K; Peters, Mette A; Roussos, Panos | September 24, 2019 | Not Determined |
31544924 | Create Study | Functional interpretation of genetic variants using deep learning predicts impact on chromatin accessibility and histone modification. | Nucleic acids research | Hoffman, Gabriel E; Bendl, Jaroslav; Girdhar, Kiran; Schadt, Eric E; Roussos, Panos | November 18, 2019 | Not Determined |
31537091 | Create Study | The Devastating Clinical Consequences of Child Abuse and Neglect: Increased Disease Vulnerability and Poor Treatment Response in Mood Disorders. | The American journal of psychiatry | Lippard, Elizabeth T C; Nemeroff, Charles B | January 1, 2020 | Not Determined |
31534116 | Create Study | Inflammation-related biomarkers in major psychiatric disorders: a cross-disorder assessment of reproducibility and specificity in 43 meta-analyses. | Translational psychiatry | Yuan, Ning; Chen, Yu; Xia, Yan; Dai, Jiacheng; Liu, Chunyu | September 18, 2019 | Not Determined |
31519912 | Create Study | Pre- and peri-implantation Zika virus infection impairs fetal development by targeting trophectoderm cells. | Nature communications | Tan, Lei; Lacko, Lauretta A; Zhou, Ting; Tomoiaga, Delia; Hurtado, Romulo; Zhang, Tuo; Sevilla, Ana; Zhong, Aaron; Mason, Christopher E; Noggle, Scott; Evans, Todd; Stuhlmann, Heidi; Schwartz, Robert E; Chen, Shuibing | September 13, 2019 | Not Determined |
31501426 | Create Study | Accurate detection of m6A RNA modifications in native RNA sequences. | Nature communications | Liu, Huanle; Begik, Oguzhan; Lucas, Morghan C; Ramirez, Jose Miguel; Mason, Christopher E; Wiener, David; Schwartz, Schraga; Mattick, John S; Smith, Martin A; Novoa, Eva Maria | September 9, 2019 | Not Determined |
31484546 | Create Study | TOAST: improving reference-free cell composition estimation by cross-cell type differential analysis. | Genome biology | Li, Ziyi; Wu, Hao | September 4, 2019 | Not Determined |
31455887 | Create Study | Global landscape and genetic regulation of RNA editing in cortical samples from individuals with schizophrenia. | Nature neuroscience | Breen, Michael S; Dobbyn, Amanda; Li, Qin; Roussos, Panos; Hoffman, Gabriel E; Stahl, Eli; Chess, Andrew; Sklar, Pamela; Li, Jin Billy; Devlin, Bernie; Buxbaum, Joseph D; CommonMind Consortium | September 1, 2019 | Not Determined |
31455884 | Create Study | Profiling allele-specific gene expression in brains from individuals with autism spectrum disorder reveals preferential minor allele usage. | Nature neuroscience | Lee, Changhoon; Kang, Eun Yong; Gandal, Michael J; Eskin, Eleazar; Geschwind, Daniel H | September 1, 2019 | Not Determined |
31444360 | Create Study | Integrative transcriptome imputation reveals tissue-specific and shared biological mechanisms mediating susceptibility to complex traits. | Nature communications | Zhang, Wen; Voloudakis, Georgios; Rajagopal, Veera M; Readhead, Ben; Dudley, Joel T; Schadt, Eric E; Björkegren, Johan L M; Kim, Yungil; Fullard, John F; Hoffman, Gabriel E; Roussos, Panos | August 23, 2019 | Not Determined |
31424545 | Create Study | Comparative Genomic Characterization of the Multimammate Mouse Mastomys coucha. | Molecular biology and evolution | Hardin, Aaron; Nevonen, Kimberly A; Eckalbar, Walter L; Carbone, Lucia; Ahituv, Nadav | December 1, 2019 | Not Determined |
31399567 | Create Study | Diurnal rhythms in gene expression in the prefrontal cortex in schizophrenia. | Nature communications | Seney, Marianne L; Cahill, Kelly; Enwright 3rd, John F; Logan, Ryan W; Huo, Zhiguang; Zong, Wei; Tseng, George; McClung, Colleen A | August 9, 2019 | Not Determined |
31395865 | Create Study | Saturation mutagenesis of twenty disease-associated regulatory elements at single base-pair resolution. | Nature communications | Kircher, Martin; Xiong, Chenling; Martin, Beth; Schubach, Max; Inoue, Fumitaka; Bell, Robert J A; Costello, Joseph F; Shendure, Jay; Ahituv, Nadav | August 8, 2019 | Not Determined |
31348493 | Create Study | Diverse and dynamic DNA modifications in brain and diseases. | Human molecular genetics | Armstrong, Matthew J; Jin, Yulin; Allen, Emily G; Jin, Peng | November 21, 2019 | Not Determined |
31303374 | Create Study | A Single-Cell Transcriptomic Atlas of Human Neocortical Development during Mid-gestation. | Neuron | Polioudakis, Damon; de la Torre-Ubieta, Luis; Langerman, Justin; Elkins, Andrew G; Shi, Xu; Stein, Jason L; Vuong, Celine K; Nichterwitz, Susanne; Gevorgian, Melinda; Opland, Carli K; Lu, Daning; Connell, William; Ruzzo, Elizabeth K; Lowe, Jennifer K; Hadzic, Tarik; Hinz, Flora I; Sabri, Shan; Lowry, William E; Gerstein, Mark B; Plath, Kathrin; Geschwind, Daniel H | September 4, 2019 | Not Determined |
31283446 | Create Study | Regulation of Viral Infection by the RNA Modification N6-Methyladenosine. | Annual review of virology | Williams, Graham D; Gokhale, Nandan S; Horner, Stacy M | September 29, 2019 | Not Determined |
31279629 | Create Study | Building a Hybrid Physical-Statistical Classifier for Predicting the Effect of Variants Related to Protein-Drug Interactions. | Structure (London, England : 1993) | Wang, Bo; Yan, Chengfei; Lou, Shaoke; Emani, Prashant; Li, Bian; Xu, Min; Kong, Xiangmeng; Meyerson, William; Yang, Yucheng T; Lee, Donghoon; Gerstein, Mark | September 3, 2019 | Not Determined |
31230762 | Create Study | The Autism-Associated Gene Scn2a Contributes to Dendritic Excitability and Synaptic Function in the Prefrontal Cortex. | Neuron | Spratt, Perry W E; Ben-Shalom, Roy; Keeshen, Caroline M; Burke Jr, Kenneth J; Clarkson, Rebecca L; Sanders, Stephan J; Bender, Kevin J | August 21, 2019 | Not Determined |
31174959 | Create Study | Regional Heterogeneity in Gene Expression, Regulation, and Coherence in the Frontal Cortex and Hippocampus across Development and Schizophrenia. | Neuron | Collado-Torres, Leonardo; Burke, Emily E; Peterson, Amy; Shin, JooHeon; Straub, Richard E; Rajpurohit, Anandita; Semick, Stephen A; Ulrich, William S; BrainSeq Consortium; Price, Amanda J; Valencia, Cristian; Tao, Ran; Deep-Soboslay, Amy; Hyde, Thomas M; Kleinman, Joel E; Weinberger, Daniel R; Jaffe, Andrew E | July 17, 2019 | Not Determined |
31173711 | Create Study | Breakthrough Moments: Yoshiki Sasai''s Discoveries in the Third Dimension. | Cell stem cell | Mariani, Jessica; Vaccarino, Flora M | June 6, 2019 | Not Determined |
31160561 | Create Study | Human evolved regulatory elements modulate genes involved in cortical expansion and neurodevelopmental disease susceptibility. | Nature communications | Won, Hyejung; Huang, Jerry; Opland, Carli K; Hartl, Chris L; Geschwind, Daniel H | June 3, 2019 | Not Determined |
31131957 | Create Study | Meta-analysis of massively parallel reporter assays enables prediction of regulatory function across cell types. | Human mutation | Kreimer, Anat; Yan, Zhongxia; Ahituv, Nadav; Yosef, Nir | September 1, 2019 | Not Determined |
31083650 | Create Study | Rapid antigen diversification through mitotic recombination in the human malaria parasite Plasmodium falciparum. | PLoS biology | Zhang, Xu; Alexander, Noah; Leonardi, Irina; Mason, Christopher; Kirkman, Laura A; Deitsch, Kirk W | May 1, 2019 | Not Determined |
31056284 | Create Study | Selenium Drives a Transcriptional Adaptive Program to Block Ferroptosis and Treat Stroke. | Cell | Alim, Ishraq; Caulfield, Joseph T; Chen, Yingxin; Swarup, Vivek; Geschwind, Daniel H; Ivanova, Elena; Seravalli, Javier; Ai, Youxi; Sansing, Lauren H; Ste Marie, Emma J; Hondal, Robert J; Mukherjee, Sushmita; Cave, John W; Sagdullaev, Botir T; Karuppagounder, Saravanan S; Ratan, Rajiv R | May 16, 2019 | Not Determined |
31048727 | Create Study | The critical importance of basic animal research for neuropsychiatric disorders. | Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology | Bale, Tracy L; Abel, Ted; Akil, Huda; Carlezon Jr, William A; Moghaddam, Bita; Nestler, Eric J; Ressler, Kerry J; Thompson, Scott M | July 1, 2019 | Not Determined |
30988527 | Create Study | A Bayesian framework that integrates multi-omics data and gene networks predicts risk genes from schizophrenia GWAS data. | Nature neuroscience | Wang, Quan; Chen, Rui; Cheng, Feixiong; Wei, Qiang; Ji, Ying; Yang, Hai; Zhong, Xue; Tao, Ran; Wen, Zhexing; Sutcliffe, James S; Liu, Chunyu; Cook, Edwin H; Cox, Nancy J; Li, Bingshan | May 1, 2019 | Not Determined |
30976116 | Create Study | Gene Expression Profiles Associated with Brain Aging are Altered in Schizophrenia. | Scientific reports | Sabunciyan, Sarven | April 11, 2019 | Not Determined |
30976086 | Create Study | Sex-differential DNA methylation and associated regulation networks in human brain implicated in the sex-biased risks of psychiatric disorders. | Molecular psychiatry | Xia, Yan; Dai, Rujia; Wang, Kangli; Jiao, Chuan; Zhang, Chunling; Xu, Yuchen; Li, Honglei; Jing, Xi; Chen, Yu; Jiang, Yi; Kopp, Richard F; Giase, Gina; Chen, Chao; Liu, Chunyu | March 1, 2021 | Not Determined |
30946827 | Create Study | Deconstructing the Gestalt: Mechanisms of Fear, Threat, and Trauma Memory Encoding. | Neuron | Maddox, Stephanie A; Hartmann, Jakob; Ross, Rachel A; Ressler, Kerry J | April 3, 2019 | Not Determined |
30903684 | Create Study | Dissecting differential signals in high-throughput data from complex tissues. | Bioinformatics (Oxford, England) | Li, Ziyi; Wu, Zhijin; Jin, Peng; Wu, Hao | October 15, 2019 | Not Determined |
30901538 | Create Study | Defining the Genetic, Genomic, Cellular, and Diagnostic Architectures of Psychiatric Disorders. | Cell | Sullivan, Patrick F; Geschwind, Daniel H | March 21, 2019 | Not Determined |
30881380 | Create Study | Epigenetic Modifications in Acute Myeloid Leukemia: Prognosis, Treatment, and Heterogeneity. | Frontiers in genetics | Goldman, Samantha L; Hassan, Ciaran; Khunte, Mihir; Soldatenko, Arielle; Jong, Yunji; Afshinnekoo, Ebrahim; Mason, Christopher E | January 1, 2019 | Not Determined |
30881372 | Create Study | The Impact of Heterogeneity on Single-Cell Sequencing. | Frontiers in genetics | Goldman, Samantha L; MacKay, Matthew; Afshinnekoo, Ebrahim; Melnick, Ari M; Wu, Shuxiu; Mason, Christopher E | January 1, 2019 | Not Determined |
30773596 | Create Study | Chromatin organization modulates the origin of heritable structural variations in human genome. | Nucleic acids research | Roychowdhury, Tanmoy; Abyzov, Alexej | April 8, 2019 | Not Determined |
30718479 | Create Study | Single-molecule sequencing detection of N6-methyladenine in microbial reference materials. | Nature communications | McIntyre, Alexa B R; Alexander, Noah; Grigorev, Kirill; Bezdan, Daniela; Sichtig, Heike; Chiu, Charles Y; Mason, Christopher E | February 4, 2019 | Not Determined |
30692689 | Create Study | A genome-wide association study of shared risk across psychiatric disorders implicates gene regulation during fetal neurodevelopment. | Nature neuroscience | Schork, Andrew J; Won, Hyejung; Appadurai, Vivek; Nudel, Ron; Gandal, Mike; Delaneau, Olivier; Revsbech Christiansen, Malene; Hougaard, David M; Bækved-Hansen, Marie; Bybjerg-Grauholm, Jonas; Giørtz Pedersen, Marianne; Agerbo, Esben; Bøcker Pedersen, Carsten; Neale, Benjamin M; Daly, Mark J; Wray, Naomi R; Nordentoft, Merete; Mors, Ole; Børglum, Anders D; Bo Mortensen, Preben; Buil, Alfonso; Thompson, Wesley K; Geschwind, Daniel H; Werge, Thomas | March 1, 2019 | Not Determined |
30677551 | Create Study | Shared and derived features of cellular diversity in the human cerebral cortex. | Current opinion in neurobiology | Miller, Daniel J; Bhaduri, Aparna; Sestan, Nenad; Kriegstein, Arnold | June 1, 2019 | Not Determined |
30655504 | Create Study | Assessment of somatic single-nucleotide variation in brain tissue of cases with schizophrenia. | Translational psychiatry | Fullard, John F; Charney, Alexander W; Voloudakis, Georgios; Uzilov, Andrew V; Haroutunian, Vahram; Roussos, Panos | January 17, 2019 | Not Determined |
30591030 | Create Study | iMEGES: integrated mental-disorder GEnome score by deep neural network for prioritizing the susceptibility genes for mental disorders in personal genomes. | BMC bioinformatics | Khan, Atlas; Liu, Qian; Wang, Kai | December 28, 2018 | Not Determined |
30555922 | Create Study | Using 3D epigenomic maps of primary olfactory neuronal cells from living individuals to understand gene regulation. | Science advances | Rhie, Suhn K; Schreiner, Shannon; Witt, Heather; Armoskus, Chris; Lay, Fides D; Camarena, Adrian; Spitsyna, Valeria N; Guo, Yu; Berman, Benjamin P; Evgrafov, Oleg V; Knowles, James A; Farnham, Peggy J | December 1, 2018 | Not Determined |
30545965 | Create Study | The DGCR5 long noncoding RNA may regulate expression of several schizophrenia-related genes. | Science translational medicine | Meng, Qingtuan; Wang, Kangli; Brunetti, Tonya; Xia, Yan; Jiao, Chuan; Dai, Rujia; Fitzgerald, Dominic; Thomas, Amber; Jay, Lindsey; Eckart, Heather; Grennan, Kay; Imamura-Kawasawa, Yuka; Li, Mingfeng; Sestan, Nenad; White, Kevin P; Chen, Chao; Liu, Chunyu | December 19, 2018 | Not Determined |
30545964 | Create Study | The transcription factor POU3F2 regulates a gene coexpression network in brain tissue from patients with psychiatric disorders. | Science translational medicine | Chen, Chao; Meng, Qingtuan; Xia, Yan; Ding, Chaodong; Wang, Le; Dai, Rujia; Cheng, Lijun; Gunaratne, Preethi; Gibbs, Richard A; Min, Shishi; Coarfa, Cristian; Reid, Jeffrey G; Zhang, Chunling; Jiao, Chuan; Jiang, Yi; Giase, Gina; Thomas, Amber; Fitzgerald, Dominic; Brunetti, Tonya; Shieh, Annie; Xia, Cuihua; Wang, Yongjun; Wang, Yunpeng; Badner, Judith A; Gershon, Elliot S; White, Kevin P; Liu, Chunyu | December 19, 2018 | Not Determined |
30545881 | Create Study | Revealing the brain''s molecular architecture. | Science (New York, N.Y.) | PsychENCODE Consortium | December 14, 2018 | Not Determined |
30545857 | Create Study | Comprehensive functional genomic resource and integrative model for the human brain. | Science (New York, N.Y.) | Wang, Daifeng; Liu, Shuang; Warrell, Jonathan; Won, Hyejung; Shi, Xu; Navarro, Fabio C P; Clarke, Declan; Gu, Mengting; Emani, Prashant; Yang, Yucheng T; Xu, Min; Gandal, Michael J; Lou, Shaoke; Zhang, Jing; Park, Jonathan J; Yan, Chengfei; Rhie, Suhn Kyong; Manakongtreecheep, Kasidet; Zhou, Holly; Nathan, Aparna; Peters, Mette; Mattei, Eugenio; Fitzgerald, Dominic; Brunetti, Tonya; Moore, Jill; Jiang, Yan; Girdhar, Kiran; Hoffman, Gabriel E; Kalayci, Selim; Gümüş, Zeynep H; Crawford, Gregory E; PsychENCODE Consortium; Roussos, Panos; Akbarian, Schahram; Jaffe, Andrew E; White, Kevin P; Weng, Zhiping; Sestan, Nenad; Geschwind, Daniel H; Knowles, James A; Gerstein, Mark B | December 14, 2018 | Not Determined |
30545856 | Create Study | Transcriptome-wide isoform-level dysregulation in ASD, schizophrenia, and bipolar disorder. | Science (New York, N.Y.) | Gandal, Michael J; Zhang, Pan; Hadjimichael, Evi; Walker, Rebecca L; Chen, Chao; Liu, Shuang; Won, Hyejung; van Bakel, Harm; Varghese, Merina; Wang, Yongjun; Shieh, Annie W; Haney, Jillian; Parhami, Sepideh; Belmont, Judson; Kim, Minsoo; Moran Losada, Patricia; Khan, Zenab; Mleczko, Justyna; Xia, Yan; Dai, Rujia; Wang, Daifeng; Yang, Yucheng T; Xu, Min; Fish, Kenneth; Hof, Patrick R; Warrell, Jonathan; Fitzgerald, Dominic; White, Kevin; Jaffe, Andrew E; PsychENCODE Consortium; Peters, Mette A; Gerstein, Mark; Liu, Chunyu; Iakoucheva, Lilia M; Pinto, Dalila; Geschwind, Daniel H | December 14, 2018 | Not Determined |
30545855 | Create Study | Spatiotemporal transcriptomic divergence across human and macaque brain development. | Science (New York, N.Y.) | Zhu, Ying; Sousa, André M M; Gao, Tianliuyun; Skarica, Mario; Li, Mingfeng; Santpere, Gabriel; Esteller-Cucala, Paula; Juan, David; Ferrández-Peral, Luis; Gulden, Forrest O; Yang, Mo; Miller, Daniel J; Marques-Bonet, Tomas; Imamura Kawasawa, Yuka; Zhao, Hongyu; Sestan, Nenad | December 14, 2018 | Not Determined |
30545854 | Create Study | Integrative functional genomic analysis of human brain development and neuropsychiatric risks. | Science (New York, N.Y.) | Li, Mingfeng; Santpere, Gabriel; Imamura Kawasawa, Yuka; Evgrafov, Oleg V; Gulden, Forrest O; Pochareddy, Sirisha; Sunkin, Susan M; Li, Zhen; Shin, Yurae; Zhu, Ying; Sousa, André M M; Werling, Donna M; Kitchen, Robert R; Kang, Hyo Jung; Pletikos, Mihovil; Choi, Jinmyung; Muchnik, Sydney; Xu, Xuming; Wang, Daifeng; Lorente-Galdos, Belen; Liu, Shuang; Giusti-Rodríguez, Paola; Won, Hyejung; de Leeuw, Christiaan A; Pardiñas, Antonio F; BrainSpan Consortium; PsychENCODE Consortium; PsychENCODE Developmental Subgroup; Hu, Ming; Jin, Fulai; Li, Yun; Owen, Michael J; O'Donovan, Michael C; Walters, James T R; Posthuma, Danielle; Reimers, Mark A; Levitt, Pat; Weinberger, Daniel R; Hyde, Thomas M; Kleinman, Joel E; Geschwind, Daniel H; Hawrylycz, Michael J; State, Matthew W; Sanders, Stephan J; Sullivan, Patrick F; Gerstein, Mark B; Lein, Ed S; Knowles, James A; Sestan, Nenad | December 14, 2018 | Not Determined |
30545853 | Create Study | Transcriptome and epigenome landscape of human cortical development modeled in organoids. | Science (New York, N.Y.) | Amiri, Anahita; Coppola, Gianfilippo; Scuderi, Soraya; Wu, Feinan; Roychowdhury, Tanmoy; Liu, Fuchen; Pochareddy, Sirisha; Shin, Yurae; Safi, Alexias; Song, Lingyun; Zhu, Ying; Sousa, André M M; PsychENCODE Consortium; Gerstein, Mark; Crawford, Gregory E; Sestan, Nenad; Abyzov, Alexej; Vaccarino, Flora M | December 14, 2018 | Not Determined |
30545852 | Create Study | Genome-wide de novo risk score implicates promoter variation in autism spectrum disorder. | Science (New York, N.Y.) | An, Joon-Yong; Lin, Kevin; Zhu, Lingxue; Werling, Donna M; Dong, Shan; Brand, Harrison; Wang, Harold Z; Zhao, Xuefang; Schwartz, Grace B; Collins, Ryan L; Currall, Benjamin B; Dastmalchi, Claudia; Dea, Jeanselle; Duhn, Clif; Gilson, Michael C; Klei, Lambertus; Liang, Lindsay; Markenscoff-Papadimitriou, Eirene; Pochareddy, Sirisha; Ahituv, Nadav; Buxbaum, Joseph D; Coon, Hilary; Daly, Mark J; Kim, Young Shin; Marth, Gabor T; Neale, Benjamin M; Quinlan, Aaron R; Rubenstein, John L; Sestan, Nenad; State, Matthew W; Willsey, A Jeremy; Talkowski, Michael E; Devlin, Bernie; Roeder, Kathryn; Sanders, Stephan J | December 14, 2018 | Not Determined |
30545851 | Create Study | Neuron-specific signatures in the chromosomal connectome associated with schizophrenia risk. | Science (New York, N.Y.) | Rajarajan, Prashanth; Borrman, Tyler; Liao, Will; Schrode, Nadine; Flaherty, Erin; Casiño, Charlize; Powell, Samuel; Yashaswini, Chittampalli; LaMarca, Elizabeth A; Kassim, Bibi; Javidfar, Behnam; Espeso-Gil, Sergio; Li, Aiqun; Won, Hyejung; Geschwind, Daniel H; Ho, Seok-Man; MacDonald, Matthew; Hoffman, Gabriel E; Roussos, Panos; Zhang, Bin; Hahn, Chang-Gyu; Weng, Zhiping; Brennand, Kristen J; Akbarian, Schahram | December 14, 2018 | Not Determined |
30420340 | Create Study | Next-Generation Sequencing in Autism Spectrum Disorder. | Cold Spring Harbor perspectives in medicine | Sanders, Stephan J | August 1, 2019 | Not Determined |
30359605 | Create Study | Lost in Translation: Traversing the Complex Path from Genomics to Therapeutics in Autism Spectrum Disorder. | Neuron | Sestan, Nenad; State, Matthew W | October 24, 2018 | Not Determined |
30318146 | Create Study | The 7q11.23 Protein DNAJC30 Interacts with ATP Synthase and Links Mitochondria to Brain Development. | Cell | Tebbenkamp, Andrew T N; Varela, Luis; Choi, Jinmyung; Paredes, Miguel I; Giani, Alice M; Song, Jae Eun; Sestan-Pesa, Matija; Franjic, Daniel; Sousa, André M M; Liu, Zhong-Wu; Li, Mingfeng; Bichsel, Candace; Koch, Marco; Szigeti-Buck, Klara; Liu, Fuchen; Li, Zhuo; Kawasawa, Yuka I; Paspalas, Constantinos D; Mineur, Yann S; Prontera, Paolo; Merla, Giuseppe; Picciotto, Marina R; Arnsten, Amy F T; Horvath, Tamas L; Sestan, Nenad | November 1, 2018 | Not Determined |
30283037 | Create Study | Adolescent exposure to Δ9-tetrahydrocannabinol alters the transcriptional trajectory and dendritic architecture of prefrontal pyramidal neurons. | Molecular psychiatry | Miller, Michael L; Chadwick, Benjamin; Dickstein, Dara L; Purushothaman, Immanuel; Egervari, Gabor; Rahman, Tanni; Tessereau, Chloe; Hof, Patrick R; Roussos, Panos; Shen, Li; Baxter, Mark G; Hurd, Yasmin L | April 1, 2019 | Not Determined |
30263963 | Create Study | A unique role for DNA (hydroxy)methylation in epigenetic regulation of human inhibitory neurons. | Science advances | Kozlenkov, Alexey; Li, Junhao; Apontes, Pasha; Hurd, Yasmin L; Byne, William M; Koonin, Eugene V; Wegner, Michael; Mukamel, Eran A; Dracheva, Stella | September 1, 2018 | Not Determined |
30224808 | Create Study | Enhancers active in dopamine neurons are a primary link between genetic variation and neuropsychiatric disease. | Nature neuroscience | Dong, Xianjun; Liao, Zhixiang; Gritsch, David; Hadzhiev, Yavor; Bai, Yunfei; Locascio, Joseph J; Guennewig, Boris; Liu, Ganqiang; Blauwendraat, Cornelis; Wang, Tao; Adler, Charles H; Hedreen, John C; Faull, Richard L M; Frosch, Matthew P; Nelson, Peter T; Rizzu, Patrizia; Cooper, Antony A; Heutink, Peter; Beach, Thomas G; Mattick, John S; Müller, Ferenc; Scherzer, Clemens R | October 1, 2018 | Not Determined |
30177255 | Create Study | Transcriptomic Evidence for Alterations in Astrocytes and Parvalbumin Interneurons in Subjects With Bipolar Disorder and Schizophrenia. | Biological psychiatry | Toker, Lilah; Mancarci, Burak Ogan; Tripathy, Shreejoy; Pavlidis, Paul | December 1, 2018 | Not Determined |
30125121 | Create Study | Isoform-Level Interpretation of High-Throughput Proteomics Data Enabled by Deep Integration with RNA-seq. | Journal of proteome research | Carlyle, Becky C; Kitchen, Robert R; Zhang, Jing; Wilson, Rashaun S; Lam, Tukiet T; Rozowsky, Joel S; Williams, Kenneth R; Sestan, Nenad; Gerstein, Mark B; Nairn, Angus C | October 5, 2018 | Not Determined |
30104368 | Create Study | N6-methyladenosine modification of hepatitis B virus RNA differentially regulates the viral life cycle. | Proceedings of the National Academy of Sciences of the United States of America | Imam, Hasan; Khan, Mohsin; Gokhale, Nandan S; McIntyre, Alexa B R; Kim, Geon-Woo; Jang, Jae Young; Kim, Seong-Jun; Mason, Christopher E; Horner, Stacy M; Siddiqui, Aleem | August 28, 2018 | Not Determined |
30087329 | Create Study | Evaluation of chromatin accessibility in prefrontal cortex of individuals with schizophrenia. | Nature communications | Bryois, Julien; Garrett, Melanie E; Song, Lingyun; Safi, Alexias; Giusti-Rodriguez, Paola; Johnson, Graham D; Shieh, Annie W; Buil, Alfonso; Fullard, John F; Roussos, Panos; Sklar, Pamela; Akbarian, Schahram; Haroutunian, Vahram; Stockmeier, Craig A; Wray, Gregory A; White, Kevin P; Liu, Chunyu; Reddy, Timothy E; Ashley-Koch, Allison; Sullivan, Patrick F; Crawford, Gregory E | August 7, 2018 | Not Determined |
30054570 | Create Study | Brain circuit dysfunction in post-traumatic stress disorder: from mouse to man. | Nature reviews. Neuroscience | Fenster, Robert J; Lebois, Lauren A M; Ressler, Kerry J; Suh, Junghyup | September 1, 2018 | Not Determined |
30053424 | Create Study | The Psychiatric Cell Map Initiative: A Convergent Systems Biological Approach to Illuminating Key Molecular Pathways in Neuropsychiatric Disorders. | Cell | Willsey, A Jeremy; Morris, Montana T; Wang, Sheng; Willsey, Helen R; Sun, Nawei; Teerikorpi, Nia; Baum, Tierney B; Cagney, Gerard; Bender, Kevin J; Desai, Tejal A; Srivastava, Deepak; Davis, Graeme W; Doudna, Jennifer; Chang, Edward; Sohal, Vikaas; Lowenstein, Daniel H; Li, Hao; Agard, David; Keiser, Michael J; Shoichet, Brian; von Zastrow, Mark; Mucke, Lennart; Finkbeiner, Steven; Gan, Li; Sestan, Nenad; Ward, Michael E; Huttenhain, Ruth; Nowakowski, Tomasz J; Bellen, Hugo J; Frank, Loren M; Khokha, Mustafa K; Lifton, Richard P; Kampmann, Martin; Ideker, Trey; State, Matthew W; Krogan, Nevan J | July 26, 2018 | Not Determined |
30050107 | Create Study | Developmental and genetic regulation of the human cortex transcriptome illuminate schizophrenia pathogenesis. | Nature neuroscience | Jaffe, Andrew E; Straub, Richard E; Shin, Joo Heon; Tao, Ran; Gao, Yuan; Collado-Torres, Leonardo; Kam-Thong, Tony; Xi, Hualin S; Quan, Jie; Chen, Qiang; Colantuoni, Carlo; Ulrich, William S; Maher, Brady J; Deep-Soboslay, Amy; BrainSeq Consortium; Cross, Alan J; Brandon, Nicholas J; Leek, Jeffrey T; Hyde, Thomas M; Kleinman, Joel E; Weinberger, Daniel R | August 1, 2018 | Not Determined |
30038276 | Create Study | Cell-specific histone modification maps in the human frontal lobe link schizophrenia risk to the neuronal epigenome. | Nature neuroscience | Girdhar, Kiran; Hoffman, Gabriel E; Jiang, Yan; Brown, Leanne; Kundakovic, Marija; Hauberg, Mads E; Francoeur, Nancy J; Wang, Ying-Chih; Shah, Hardik; Kavanagh, David H; Zharovsky, Elizabeth; Jacobov, Rivka; Wiseman, Jennifer R; Park, Royce; Johnson, Jessica S; Kassim, Bibi S; Sloofman, Laura; Mattei, Eugenio; Weng, Zhiping; Sieberts, Solveig K; Peters, Mette A; Harris, Brent T; Lipska, Barbara K; Sklar, Pamela; Roussos, Panos; Akbarian, Schahram | August 1, 2018 | Not Determined |
29985970 | Create Study | BrainEXP: a database featuring with spatiotemporal expression variations and co-expression organizations in human brains. | Bioinformatics (Oxford, England) | Jiao, Chuan; Yan, Pengpeng; Xia, Cuihua; Shen, Zhaoming; Tan, Zexi; Tan, Yanyan; Wang, Kangli; Jiang, Yi; Huang, Lingling; Dai, Rujia; Wei, Yu; Xia, Yan; Meng, Qingtuan; Ouyang, Yanmei; Yi, Liu; Duan, Fangyuan; Dai, Jiacheng; Zhao, Shunan; Liu, Chunyu; Chen, Chao | January 1, 2019 | Not Determined |
29955163 | Create Study | Molecular windows into the human brain for psychiatric disorders. | Molecular psychiatry | Egervari, Gabor; Kozlenkov, Alexey; Dracheva, Stella; Hurd, Yasmin L | May 1, 2019 | Not Determined |
29945882 | Create Study | An atlas of chromatin accessibility in the adult human brain. | Genome research | Fullard, John F; Hauberg, Mads E; Bendl, Jaroslav; Egervari, Gabor; Cirnaru, Maria-Daniela; Reach, Sarah M; Motl, Jan; Ehrlich, Michelle E; Hurd, Yasmin L; Roussos, Panos | August 1, 2018 | Not Determined |
29942042 | Create Study | A decade in psychiatric GWAS research. | Molecular psychiatry | Horwitz, Tanya; Lam, Katie; Chen, Yu; Xia, Yan; Liu, Chunyu | March 1, 2019 | Not Determined |
29892006 | Create Study | Brain Cell Type Specific Gene Expression and Co-expression Network Architectures. | Scientific reports | McKenzie, Andrew T; Wang, Minghui; Hauberg, Mads E; Fullard, John F; Kozlenkov, Alexey; Keenan, Alexandra; Hurd, Yasmin L; Dracheva, Stella; Casaccia, Patrizia; Roussos, Panos; Zhang, Bin | June 11, 2018 | Not Determined |
29740122 | Create Study | Differential activity of transcribed enhancers in the prefrontal cortex of 537 cases with schizophrenia and controls. | Molecular psychiatry | Hauberg, Mads E; Fullard, John F; Zhu, Lingxue; Cohain, Ariella T; Giambartolomei, Claudia; Misir, Ruth; Reach, Sarah; Johnson, Jessica S; Wang, Minghui; Mattheisen, Manuel; Børglum, Anders Dupont; Zhang, Bin; Sieberts, Solveig K; Peters, Mette A; Domenici, Enrico; Schadt, Eric E; Devlin, Bernie; Sklar, Pamela; Roeder, Kathryn; Roussos, Panos; CommonMind Consortium | November 1, 2019 | Not Determined |
29700473 | Create Study | An analytical framework for whole-genome sequence association studies and its implications for autism spectrum disorder. | Nature genetics | Werling, Donna M; Brand, Harrison; An, Joon-Yong; Stone, Matthew R; Zhu, Lingxue; Glessner, Joseph T; Collins, Ryan L; Dong, Shan; Layer, Ryan M; Markenscoff-Papadimitriou, Eirene; Farrell, Andrew; Schwartz, Grace B; Wang, Harold Z; Currall, Benjamin B; Zhao, Xuefang; Dea, Jeanselle; Duhn, Clif; Erdman, Carolyn A; Gilson, Michael C; Yadav, Rachita; Handsaker, Robert E; Kashin, Seva; Klei, Lambertus; Mandell, Jeffrey D; Nowakowski, Tomasz J; Liu, Yuwen; Pochareddy, Sirisha; Smith, Louw; Walker, Michael F; Waterman, Matthew J; He, Xin; Kriegstein, Arnold R; Rubenstein, John L; Sestan, Nenad; McCarroll, Steven A; Neale, Benjamin M; Coon, Hilary; Willsey, A Jeremy; Buxbaum, Joseph D; Daly, Mark J; State, Matthew W; Quinlan, Aaron R; Marth, Gabor T; Roeder, Kathryn; Devlin, Bernie; Talkowski, Michael E; Sanders, Stephan J | April 26, 2018 | Not Determined |
29691375 | Create Study | THC exposure of human iPSC neurons impacts genes associated with neuropsychiatric disorders. | Translational psychiatry | Guennewig, Boris; Bitar, Maina; Obiorah, Ifeanyi; Hanks, James; O'Brien, Elizabeth A; Kaczorowski, Dominik C; Hurd, Yasmin L; Roussos, Panos; Brennand, Kristen J; Barry, Guy | April 25, 2018 | Not Determined |
29632383 | Create Study | Transcriptome-wide association study of schizophrenia and chromatin activity yields mechanistic disease insights. | Nature genetics | Gusev, Alexander; Mancuso, Nicholas; Won, Hyejung; Kousi, Maria; Finucane, Hilary K; Reshef, Yakir; Song, Lingyun; Safi, Alexias; Schizophrenia Working Group of the Psychiatric Genomics Consortium; McCarroll, Steven; Neale, Benjamin M; Ophoff, Roel A; O'Donovan, Michael C; Crawford, Gregory E; Geschwind, Daniel H; Katsanis, Nicholas; Sullivan, Patrick F; Pasaniuc, Bogdan; Price, Alkes L | April 1, 2018 | Not Determined |
29632380 | Create Study | Heritability enrichment of specifically expressed genes identifies disease-relevant tissues and cell types. | Nature genetics | Finucane, Hilary K; Reshef, Yakir A; Anttila, Verneri; Slowikowski, Kamil; Gusev, Alexander; Byrnes, Andrea; Gazal, Steven; Loh, Po-Ru; Lareau, Caleb; Shoresh, Noam; Genovese, Giulio; Saunders, Arpiar; Macosko, Evan; Pollack, Samuela; Brainstorm Consortium; Perry, John R B; Buenrostro, Jason D; Bernstein, Bradley E; Raychaudhuri, Soumya; McCarroll, Steven; Neale, Benjamin M; Price, Alkes L | April 1, 2018 | Not Determined |
29605855 | Create Study | Defining Regulatory Elements in the Human Genome Using Nucleosome Occupancy and Methylome Sequencing (NOMe-Seq). | Methods in molecular biology (Clifton, N.J.) | Rhie, Suhn Kyong; Schreiner, Shannon; Farnham, Peggy J | January 1, 2018 | Not Determined |
29579179 | Create Study | A Bayesian framework for multiple trait colocalization from summary association statistics. | Bioinformatics (Oxford, England) | Giambartolomei, Claudia; Zhenli Liu, Jimmy; Zhang, Wen; Hauberg, Mads; Shi, Huwenbo; Boocock, James; Pickrell, Joe; Jaffe, Andrew E; CommonMind Consortium; Pasaniuc, Bogdan; Roussos, Panos | August 1, 2018 | Not Determined |
29562236 | Create Study | De novo mutations in regulatory elements in neurodevelopmental disorders. | Nature | Short, Patrick J; McRae, Jeremy F; Gallone, Giuseppe; Sifrim, Alejandro; Won, Hyejung; Geschwind, Daniel H; Wright, Caroline F; Firth, Helen V; FitzPatrick, David R; Barrett, Jeffrey C; Hurles, Matthew E | March 29, 2018 | Not Determined |
29483656 | Create Study | Common schizophrenia alleles are enriched in mutation-intolerant genes and in regions under strong background selection. | Nature genetics | Pardiñas, Antonio F; Holmans, Peter; Pocklington, Andrew J; Escott-Price, Valentina; Ripke, Stephan; Carrera, Noa; Legge, Sophie E; Bishop, Sophie; Cameron, Darren; Hamshere, Marian L; Han, Jun; Hubbard, Leon; Lynham, Amy; Mantripragada, Kiran; Rees, Elliott; MacCabe, James H; McCarroll, Steven A; Baune, Bernhard T; Breen, Gerome; Byrne, Enda M; Dannlowski, Udo; Eley, Thalia C; Hayward, Caroline; Martin, Nicholas G; McIntosh, Andrew M; Plomin, Robert; Porteous, David J; Wray, Naomi R; Caballero, Armando; Geschwind, Daniel H; Huckins, Laura M; Ruderfer, Douglas M; Santiago, Enrique; Sklar, Pamela; Stahl, Eli A; Won, Hyejung; Agerbo, Esben; Als, Thomas D; Andreassen, Ole A; Bækvad-Hansen, Marie; Mortensen, Preben Bo; Pedersen, Carsten Bøcker; Børglum, Anders D; Bybjerg-Grauholm, Jonas; Djurovic, Srdjan; Durmishi, Naser; Pedersen, Marianne Giørtz; Golimbet, Vera; Grove, Jakob; Hougaard, David M; Mattheisen, Manuel; Molden, Espen; Mors, Ole; Nordentoft, Merete; Pejovic-Milovancevic, Milica; Sigurdsson, Engilbert; Silagadze, Teimuraz; Hansen, Christine Søholm; Stefansson, Kari; Stefansson, Hreinn; Steinberg, Stacy; Tosato, Sarah; Werge, Thomas; GERAD1 Consortium; CRESTAR Consortium; Collier, David A; Rujescu, Dan; Kirov, George; Owen, Michael J; O'Donovan, Michael C; Walters, James T R | March 1, 2018 | Not Determined |
29472441 | Create Study | Early emergence of cortical interneuron diversity in the mouse embryo. | Science (New York, N.Y.) | Mi, Da; Li, Zhen; Lim, Lynette; Li, Mingfeng; Moissidis, Monika; Yang, Yifei; Gao, Tianliuyun; Hu, Tim Xiaoming; Pratt, Thomas; Price, David J; Sestan, Nenad; Marín, Oscar | April 6, 2018 | Not Determined |
29469594 | Create Study | Positional effects revealed in Illumina methylation array and the impact on analysis. | Epigenomics | Jiao, Chuan; Zhang, Chunling; Dai, Rujia; Xia, Yan; Wang, Kangli; Giase, Gina; Chen, Chao; Liu, Chunyu | May 1, 2018 | Not Determined |
29439242 | Create Study | Shared molecular neuropathology across major psychiatric disorders parallels polygenic overlap. | Science (New York, N.Y.) | Gandal, Michael J; Haney, Jillian R; Parikshak, Neelroop N; Leppa, Virpi; Ramaswami, Gokul; Hartl, Chris; Schork, Andrew J; Appadurai, Vivek; Buil, Alfonso; Werge, Thomas M; Liu, Chunyu; White, Kevin P; CommonMind Consortium; PsychENCODE Consortium; iPSYCH-BROAD Working Group; Horvath, Steve; Geschwind, Daniel H | February 9, 2018 | Not Determined |
29351917 | Create Study | A Novel Method for Rapid Molecular Subgrouping of Medulloblastoma. | Clinical cancer research : an official journal of the American Association for Cancer Research | Gómez, Soledad; Garrido-Garcia, Alícia; Garcia-Gerique, Laura; Lemos, Isadora; Suñol, Mariona; de Torres, Carmen; Kulis, Marta; Pérez-Jaume, Sara; Carcaboso, Ángel M; Luu, Betty; Kieran, Mark W; Jabado, Nada; Kozlenkov, Alexey; Dracheva, Stella; Ramaswamy, Vijay; Hovestadt, Volker; Johann, Pascal; Jones, David T W; Pfister, Stefan M; Morales La Madrid, Andrés; Cruz, Ofelia; Taylor, Michael D; Martin-Subero, Jose-Ignacio; Mora, Jaume; Lavarino, Cinzia | March 15, 2018 | Not Determined |
29307494 | Create Study | The Dynamic Landscape of Open Chromatin during Human Cortical Neurogenesis. | Cell | de la Torre-Ubieta, Luis; Stein, Jason L; Won, Hyejung; Opland, Carli K; Liang, Dan; Lu, Daning; Geschwind, Daniel H | January 11, 2018 | Not Determined |
29217587 | Create Study | Different mutational rates and mechanisms in human cells at pregastrulation and neurogenesis. | Science (New York, N.Y.) | Bae, Taejeong; Tomasini, Livia; Mariani, Jessica; Zhou, Bo; Roychowdhury, Tanmoy; Franjic, Daniel; Pletikos, Mihovil; Pattni, Reenal; Chen, Bo-Juen; Venturini, Elisa; Riley-Gillis, Bridget; Sestan, Nenad; Urban, Alexander E; Abyzov, Alexej; Vaccarino, Flora M | February 2, 2018 | Not Determined |
29184206 | Create Study | A multiregional proteomic survey of the postnatal human brain. | Nature neuroscience | Carlyle, Becky C; Kitchen, Robert R; Kanyo, Jean E; Voss, Edward Z; Pletikos, Mihovil; Sousa, André M M; Lam, TuKiet T; Gerstein, Mark B; Sestan, Nenad; Nairn, Angus C | December 1, 2017 | Not Determined |
29170230 | Create Study | Molecular and cellular reorganization of neural circuits in the human lineage. | Science (New York, N.Y.) | Sousa, André M M; Zhu, Ying; Raghanti, Mary Ann; Kitchen, Robert R; Onorati, Marco; Tebbenkamp, Andrew T N; Stutz, Bernardo; Meyer, Kyle A; Li, Mingfeng; Kawasawa, Yuka Imamura; Liu, Fuchen; Perez, Raquel Garcia; Mele, Marta; Carvalho, Tiago; Skarica, Mario; Gulden, Forrest O; Pletikos, Mihovil; Shibata, Akemi; Stephenson, Alexa R; Edler, Melissa K; Ely, John J; Elsworth, John D; Horvath, Tamas L; Hof, Patrick R; Hyde, Thomas M; Kleinman, Joel E; Weinberger, Daniel R; Reimers, Mark; Lifton, Richard P; Mane, Shrikant M; Noonan, James P; State, Matthew W; Lein, Ed S; Knowles, James A; Marques-Bonet, Tomas; Sherwood, Chet C; Gerstein, Mark B; Sestan, Nenad | November 24, 2017 | Not Determined |
29117547 | Create Study | A Prostate Cancer Risk Element Functions as a Repressive Loop that Regulates HOXA13. | Cell reports | Luo, Zhifei; Rhie, Suhn Kyong; Lay, Fides D; Farnham, Peggy J | November 7, 2017 | Not Determined |
29098072 | Create Study | Molecular underpinnings of neurodegenerative disorders: striatal-enriched protein tyrosine phosphatase signaling and synaptic plasticity. | F1000Research | Lombroso, Paul J; Ogren, Marilee; Kurup, Pradeep; Nairn, Angus C | January 1, 2016 | Not Determined |
29043067 | Create Study | recount workflow: Accessing over 70,000 human RNA-seq samples with Bioconductor. | F1000Research | Collado-Torres, Leonardo; Nellore, Abhinav; Jaffe, Andrew E | January 1, 2017 | Not Determined |
29020636 | Create Study | Self-Organized Cerebral Organoids with Human-Specific Features Predict Effective Drugs to Combat Zika Virus Infection. | Cell reports | Watanabe, Momoko; Buth, Jessie E; Vishlaghi, Neda; de la Torre-Ubieta, Luis; Taxidis, Jiannis; Khakh, Baljit S; Coppola, Giovanni; Pearson, Caroline A; Yamauchi, Ken; Gong, Danyang; Dai, Xinghong; Damoiseaux, Robert; Aliyari, Roghiyh; Liebscher, Simone; Schenke-Layland, Katja; Caneda, Christine; Huang, Eric J; Zhang, Ye; Cheng, Genhong; Geschwind, Daniel H; Golshani, Peyman; Sun, Ren; Novitch, Bennett G | October 10, 2017 | Not Determined |
28794184 | Create Study | Post-transcriptional regulation of mouse neurogenesis by Pumilio proteins. | Genes & development | Zhang, Meng; Chen, Dong; Xia, Jing; Han, Wenqi; Cui, Xiekui; Neuenkirchen, Nils; Hermes, Gretchen; Sestan, Nenad; Lin, Haifan | July 1, 2017 | Not Determined |
28783139 | Create Study | Antipsychotic-induced Hdac2 transcription via NF-κB leads to synaptic and cognitive side effects. | Nature neuroscience | Ibi, Daisuke; de la Fuente Revenga, Mario; Kezunovic, Nebojsa; Muguruza, Carolina; Saunders, Justin M; Gaitonde, Supriya A; Moreno, José L; Ijaz, Maryum K; Santosh, Vishaka; Kozlenkov, Alexey; Holloway, Terrell; Seto, Jeremy; García-Bea, Aintzane; Kurita, Mitsumasa; Mosley, Grace E; Jiang, Yan; Christoffel, Daniel J; Callado, Luis F; Russo, Scott J; Dracheva, Stella; López-Giménez, Juan F; Ge, Yongchao; Escalante, Carlos R; Meana, J Javier; Akbarian, Schahram; Huntley, George W; González-Maeso, Javier | September 1, 2017 | Not Determined |
28751609 | Create Study | Control of species-dependent cortico-motoneuronal connections underlying manual dexterity. | Science (New York, N.Y.) | Gu, Zirong; Kalambogias, John; Yoshioka, Shin; Han, Wenqi; Li, Zhuo; Kawasawa, Yuka Imamura; Pochareddy, Sirisha; Li, Zhen; Liu, Fuchen; Xu, Xuming; Wijeratne, H. R. Sagara; Ueno, Masaki; Blatz, Emily; Salomone, Joseph; Kumanogoh, Atsushi; Rasin, Mladen-Roko; Gebelein, Brian; Weirauch, Matthew T; Sestan, Nenad; Martin, John H; Yoshida, Yutaka | July 28, 2017 | Not Determined |
28708995 | Create Study | Evolution of the Human Nervous System Function, Structure, and Development. | Cell | Sousa, André M M; Meyer, Kyle A; Santpere, Gabriel; Gulden, Forrest O; Sestan, Nenad | July 13, 2017 | Not Determined |
28686855 | Create Study | Large-Scale Identification of Common Trait and Disease Variants Affecting Gene Expression. | American journal of human genetics | Hauberg, Mads Engel; Zhang, Wen; Giambartolomei, Claudia; Franzén, Oscar; Morris, David L; Vyse, Timothy J; Ruusalepp, Arno; CommonMind Consortium; Sklar, Pamela; Schadt, Eric E; Björkegren, Johan L M; Roussos, Panos | July 6, 2017 | Not Determined |
28671686 | Create Study | The methyltransferase SETDB1 regulates a large neuron-specific topological chromatin domain. | Nature genetics | Jiang, Yan; Loh, Yong-Hwee Eddie; Rajarajan, Prashanth; Hirayama, Teruyoshi; Liao, Will; Kassim, Bibi S; Javidfar, Behnam; Hartley, Brigham J; Kleofas, Lisa; Park, Royce B; Labonte, Benoit; Ho, Seok-Man; Chandrasekaran, Sandhya; Do, Catherine; Ramirez, Brianna R; Peter, Cyril J; C W, Julia T; Safaie, Brian M; Morishita, Hirofumi; Roussos, Panos; Nestler, Eric J; Schaefer, Anne; Tycko, Benjamin; Brennand, Kristen J; Yagi, Takeshi; Shen, Li; Akbarian, Schahram | August 1, 2017 | Not Determined |
28634288 | Create Study | qSVA framework for RNA quality correction in differential expression analysis. | Proceedings of the National Academy of Sciences of the United States of America | Jaffe, Andrew E; Tao, Ran; Norris, Alexis L; Kealhofer, Marc; Nellore, Abhinav; Shin, Joo Heon; Kim, Dewey; Jia, Yankai; Hyde, Thomas M; Kleinman, Joel E; Straub, Richard E; Leek, Jeffrey T; Weinberger, Daniel R | July 3, 2017 | Not Determined |
28552197 | Create Study | Large-Scale Identification of Common Trait and Disease Variants Affecting Gene Expression. | American journal of human genetics | Hauberg, Mads Engel; Zhang, Wen; Giambartolomei, Claudia; Franzén, Oscar; Morris, David L; Vyse, Timothy J; Ruusalepp, Arno; CommonMind Consortium; Sklar, Pamela; Schadt, Eric E; Björkegren, Johan L M; Roussos, Panos | June 1, 2017 | Not Determined |
28533516 | Create Study | ASD restricted and repetitive behaviors associated at 17q21.33: genes prioritized by expression in fetal brains. | Molecular psychiatry | Cantor, R M; Navarro, L; Won, H; Walker, R L; Lowe, J K; Geschwind, D H | April 1, 2018 | Not Determined |
28431175 | Create Study | minepath.org: a free interactive pathway analysis web server. | Nucleic acids research | Koumakis, Lefteris; Roussos, Panos; Potamias, George | July 3, 2017 | Not Determined |
28398307 | Create Study | Reproducible RNA-seq analysis using recount2. | Nature biotechnology | Collado-Torres, Leonardo; Nellore, Abhinav; Kammers, Kai; Ellis, Shannon E; Taub, Margaret A; Hansen, Kasper D; Jaffe, Andrew E; Langmead, Ben; Leek, Jeffrey T | April 11, 2017 | Not Determined |
28335009 | Create Study | Open chromatin profiling of human postmortem brain infers functional roles for non-coding schizophrenia loci. | Human molecular genetics | Fullard, John F; Giambartolomei, Claudia; Hauberg, Mads E; Xu, Ke; Voloudakis, Georgios; Shao, Zhiping; Bare, Christopher; Dudley, Joel T; Mattheisen, Manuel; Robakis, Nikolaos K; Haroutunian, Vahram; Roussos, Panos | May 15, 2017 | Not Determined |
28334242 | Create Study | Reciprocal Connections Between Cortex and Thalamus Contribute to Retinal Axon Targeting to Dorsal Lateral Geniculate Nucleus. | Cerebral cortex (New York, N.Y. : 1991) | Diao, Yupu; Cui, Liyuan; Chen, Yuqing; Burbridge, Timothy J; Han, Wenqi; Wirth, Brunhilde; Sestan, Nenad; Crair, Michael C; Zhang, Jiayi | April 1, 2018 | Not Determined |
28256214 | Create Study | Opposing Effects on NaV1.2 Function Underlie Differences Between SCN2A Variants Observed in Individuals With Autism Spectrum Disorder or Infantile Seizures. | Biological psychiatry | Ben-Shalom, Roy; Keeshen, Caroline M; Berrios, Kiara N; An, Joon Y; Sanders, Stephan J; Bender, Kevin J | August 1, 2017 | Not Determined |
28253736 | Create Study | Identification of Developmental and Behavioral Markers Associated With Genetic Abnormalities in Autism Spectrum Disorder. | The American journal of psychiatry | Bishop, Somer L; Farmer, Cristan; Bal, Vanessa; Robinson, Elise B; Willsey, A Jeremy; Werling, Donna M; Havdahl, Karoline Alexandra; Sanders, Stephan J; Thurm, Audrey | June 1, 2017 | Not Determined |
28252112 | Create Study | Parallel changes in serum proteins and diffusion tensor imaging in methamphetamine-associated psychosis. | Scientific reports | Breen, Michael S; Uhlmann, Anne; Ozcan, Sureyya; Chan, Man; Pinto, Dalila; Bahn, Sabine; Stein, Dan J | March 2, 2017 | Not Determined |
28204568 | Create Study | Differential Gene Expression in the Human Brain Is Associated with Conserved, but Not Accelerated, Noncoding Sequences. | Molecular biology and evolution | Meyer, Kyle A; Marques-Bonet, Tomas; Sestan, Nenad | May 1, 2017 | Not Determined |
28082376 | Create Study | Axonal ribosomes and mRNAs associate with fragile X granules in adult rodent and human brains. | Human molecular genetics | Akins, Michael R; Berk-Rauch, Hanna E; Kwan, Kenneth Y; Mitchell, Molly E; Shepard, Katherine A; Korsak, Lulu I T; Stackpole, Emily E; Warner-Schmidt, Jennifer L; Sestan, Nenad; Cameron, Heather A; Fallon, Justin R | January 1, 2017 | Not Determined |
27930330 | Create Study | Simultaneous dimension reduction and adjustment for confounding variation. | Proceedings of the National Academy of Sciences of the United States of America | Lin, Zhixiang; Yang, Can; Zhu, Ying; Duchi, John; Fu, Yao; Wang, Yong; Jiang, Bai; Zamanighomi, Mahdi; Xu, Xuming; Li, Mingfeng; Sestan, Nenad; Zhao, Hongyu; Wong, Wing Hung | December 20, 2016 | Not Determined |
27891212 | Create Study | The role of sex-differential biology in risk for autism spectrum disorder. | Biology of sex differences | Werling, Donna M | January 1, 2016 | Not Determined |
27863698 | Create Study | Striatal H3K27 Acetylation Linked to Glutamatergic Gene Dysregulation in Human Heroin Abusers Holds Promise as Therapeutic Target. | Biological psychiatry | Egervari, Gabor; Landry, Joseph; Callens, James; Fullard, John F; Roussos, Panos; Keller, Eva; Hurd, Yasmin L | April 1, 2017 | Not Determined |
27814521 | Create Study | The Central Nervous System and the Gut Microbiome. | Cell | Sharon, Gil; Sampson, Timothy R; Geschwind, Daniel H; Mazmanian, Sarkis K | November 3, 2016 | Not Determined |
27760116 | Create Study | Chromosome conformation elucidates regulatory relationships in developing human brain. | Nature | Won, Hyejung; de la Torre-Ubieta, Luis; Stein, Jason L; Parikshak, Neelroop N; Huang, Jerry; Opland, Carli K; Gandal, Michael J; Sutton, Gavin J; Hormozdiari, Farhad; Lu, Daning; Lee, Changhoon; Eskin, Eleazar; Voineagu, Irina; Ernst, Jason; Geschwind, Daniel H | October 27, 2016 | Not Determined |
27732689 | Create Study | Activity-Dependent Changes in Gene Expression in Schizophrenia Human-Induced Pluripotent Stem Cell Neurons. | JAMA psychiatry | Roussos, Panos; Guennewig, Boris; Kaczorowski, Dominik C; Barry, Guy; Brennand, Kristen J | November 1, 2016 | Not Determined |
27694310 | Create Study | Flexible expressed region analysis for RNA-seq with derfinder. | Nucleic acids research | Collado-Torres, Leonardo; Nellore, Abhinav; Frazee, Alyssa C; Wilks, Christopher; Love, Michael I; Langmead, Ben; Irizarry, Rafael A; Leek, Jeffrey T; Jaffe, Andrew E | January 25, 2017 | Not Determined |
27668656 | Create Study | TSHZ3 deletion causes an autism syndrome and defects in cortical projection neurons. | Nature genetics | Caubit, Xavier; Gubellini, Paolo; Andrieux, Joris; Roubertoux, Pierre L; Metwaly, Mehdi; Jacq, Bernard; Fatmi, Ahmed; Had-Aissouni, Laurence; Kwan, Kenneth Y; Salin, Pascal; Carlier, Michèle; Liedén, Agne; Rudd, Eva; Shinawi, Marwan; Vincent-Delorme, Catherine; Cuisset, Jean-Marie; Lemaitre, Marie-Pierre; Abderrehamane, Fatimetou; Duban, Bénédicte; Lemaitre, Jean-François; Woolf, Adrian S; Bockenhauer, Detlef; Severac, Dany; Dubois, Emeric; Zhu, Ying; Sestan, Nenad; Garratt, Alistair N; Lydia Kerkerian-Le, Goff; Fasano, Laurent | November 1, 2016 | Not Determined |
27668389 | Create Study | Gene expression elucidates functional impact of polygenic risk for schizophrenia. | Nature neuroscience | Fromer, Menachem; Roussos, Panos; Sieberts, Solveig K; Johnson, Jessica S; Kavanagh, David H; Perumal, Thanneer M; Ruderfer, Douglas M; Oh, Edwin C; Topol, Aaron; Shah, Hardik R; Klei, Lambertus L; Kramer, Robin; Pinto, Dalila; Gümüş, Zeynep H; Cicek, A Ercument; Dang, Kristen K; Browne, Andrew; Lu, Cong; Xie, Lu; Readhead, Ben; Stahl, Eli A; Xiao, Jianqiu; Parvizi, Mahsa; Hamamsy, Tymor; Fullard, John F; Wang, Ying-Chih; Mahajan, Milind C; Derry, Jonathan M J; Dudley, Joel T; Hemby, Scott E; Logsdon, Benjamin A; Talbot, Konrad; Raj, Towfique; Bennett, David A; De Jager, Philip L; Zhu, Jun; Zhang, Bin; Sullivan, Patrick F; Chess, Andrew; Purcell, Shaun M; Shinobu, Leslie A; Mangravite, Lara M; Toyoshiba, Hiroyoshi; Gur, Raquel E; Hahn, Chang-Gyu; Lewis, David A; Haroutunian, Vahram; Peters, Mette A; Lipska, Barbara K; Buxbaum, Joseph D; Schadt, Eric E; Hirai, Keisuke; Roeder, Kathryn; Brennand, Kristen J; Katsanis, Nicholas; Domenici, Enrico; Devlin, Bernie; Sklar, Pamela | November 1, 2016 | Not Determined |
27568284 | Create Study | Zika Virus Disrupts Phospho-TBK1 Localization and Mitosis in Human Neuroepithelial Stem Cells and Radial Glia. | Cell reports | Onorati, Marco; Li, Zhen; Liu, Fuchen; Sousa, André M M; Nakagawa, Naoki; Li, Mingfeng; Dell'Anno, Maria Teresa; Gulden, Forrest O; Pochareddy, Sirisha; Tebbenkamp, Andrew T N; Han, Wenqi; Pletikos, Mihovil; Gao, Tianliuyun; Zhu, Ying; Bichsel, Candace; Varela, Luis; Szigeti-Buck, Klara; Lisgo, Steven; Zhang, Yalan; Testen, Anze; Gao, Xiao-Bing; Mlakar, Jernej; Popovic, Mara; Flamand, Marie; Strittmatter, Stephen M; Kaczmarek, Leonard K; Anton, E S; Horvath, Tamas L; Lindenbach, Brett D; Sestan, Nenad | September 6, 2016 | Not Determined |
27113501 | Create Study | Practical Guidelines for High-Resolution Epigenomic Profiling of Nucleosomal Histones in Postmortem Human Brain Tissue. | Biological psychiatry | Kundakovic, Marija; Jiang, Yan; Kavanagh, David H; Dincer, Aslihan; Brown, Leanne; Pothula, Venu; Zharovsky, Elizabeth; Park, Royce; Jacobov, Rivka; Magro, Isabelle; Kassim, Bibi; Wiseman, Jennifer; Dang, Kristen; Sieberts, Solveig K; Roussos, Panos; Fromer, Menachem; Harris, Brent; Lipska, Barbara K; Peters, Mette A; Sklar, Pamela; Akbarian, Schahram | January 15, 2017 | Not Determined |
27073125 | Create Study | RNA-seq analysis of developing olfactory bulb projection neurons. | Molecular and cellular neurosciences | Kawasawa, Yuka Imamura; Salzberg, Anna C; Li, Mingfeng; Šestan, Nenad; Greer, Charles A; Imamura, Fumiaki | July 1, 2016 | Not Determined |
26926866 | Create Study | A Markov random field-based approach for joint estimation of differentially expressed genes in mouse transcriptome data. | Statistical applications in genetics and molecular biology | Lin, Zhixiang; Li, Mingfeng; Sestan, Nenad; Zhao, Hongyu | April 1, 2016 | Not Determined |
26924435 | Create Study | Down Syndrome Developmental Brain Transcriptome Reveals Defective Oligodendrocyte Differentiation and Myelination. | Neuron | Olmos-Serrano, Jose Luis; Kang, Hyo Jung; Tyler, William A; Silbereis, John C; Cheng, Feng; Zhu, Ying; Pletikos, Mihovil; Jankovic-Rapan, Lucija; Cramer, Nathan P; Galdzicki, Zygmunt; Goodliffe, Joseph; Peters, Alan; Sethares, Claire; Delalle, Ivana; Golden, Jeffrey A; Haydar, Tarik F; Sestan, Nenad | March 16, 2016 | Not Determined |
26827128 | Create Study | Understanding the genetic liability to schizophrenia through the neuroepigenome. | Schizophrenia research | Fullard, John F; Halene, Tobias B; Giambartolomei, Claudia; Haroutunian, Vahram; Akbarian, Schahram; Roussos, Panos | November 1, 2016 | Not Determined |
26796689 | Create Study | The Cellular and Molecular Landscapes of the Developing Human Central Nervous System. | Neuron | Silbereis, John C; Pochareddy, Sirisha; Zhu, Ying; Li, Mingfeng; Sestan, Nenad | January 20, 2016 | Not Determined |
26776227 | Create Study | NeuN+ neuronal nuclei in non-human primate prefrontal cortex and subcortical white matter after clozapine exposure. | Schizophrenia research | Halene, Tobias B; Kozlenkov, Alexey; Jiang, Yan; Mitchell, Amanda C; Javidfar, Behnam; Dincer, Aslihan; Park, Royce; Wiseman, Jennifer; Croxson, Paula L; Giannaris, Eustathia Lela; Hof, Patrick R; Roussos, Panos; Dracheva, Stella; Hemby, Scott E; Akbarian, Schahram | February 1, 2016 | Not Determined |
26685806 | Create Study | Postmortem human brain genomics in neuropsychiatric disorders--how far can we go? | Current opinion in neurobiology | Jaffe, Andrew E | February 1, 2016 | Not Determined |
26637798 | Create Study | Targeted DNA Sequencing from Autism Spectrum Disorder Brains Implicates Multiple Genetic Mechanisms. | Neuron | D'Gama, Alissa M; Pochareddy, Sirisha; Li, Mingfeng; Jamuar, Saumya S; Reiff, Rachel E; Lam, Anh-Thu N; Sestan, Nenad; Walsh, Christopher A | December 2, 2015 | Not Determined |
26619358 | Create Study | Mapping DNA methylation across development, genotype and schizophrenia in the human frontal cortex. | Nature neuroscience | Jaffe, Andrew E; Gao, Yuan; Deep-Soboslay, Amy; Tao, Ran; Hyde, Thomas M; Weinberger, Daniel R; Kleinman, Joel E | January 1, 2016 | Not Determined |
26612861 | Create Study | Substantial DNA methylation differences between two major neuronal subtypes in human brain. | Nucleic acids research | Kozlenkov, Alexey; Wang, Minghui; Roussos, Panos; Rudchenko, Sergei; Barbu, Mihaela; Bibikova, Marina; Klotzle, Brandy; Dwork, Andrew J; Zhang, Bin; Hurd, Yasmin L; Koonin, Eugene V; Wegner, Michael; Dracheva, Stella | April 7, 2016 | Not Determined |
26610635 | Create Study | Creating Patient-Specific Neural Cells for the In Vitro Study of Brain Disorders. | Stem cell reports | Brennand, Kristen J; Marchetto, M Carol; Benvenisty, Nissim; Brüstle, Oliver; Ebert, Allison; Izpisua Belmonte, Juan Carlos; Kaykas, Ajamete; Lancaster, Madeline A; Livesey, Frederick J; McConnell, Michael J; McKay, Ronald D; Morrow, Eric M; Muotri, Alysson R; Panchision, David M; Rubin, Lee L; Sawa, Akira; Soldner, Frank; Song, Hongjun; Studer, Lorenz; Temple, Sally; Vaccarino, Flora M; Wu, Jun; Vanderhaeghen, Pierre; Gage, Fred H; Jaenisch, Rudolf | December 8, 2015 | Not Determined |
26605881 | Create Study | The PsychENCODE project. | Nature neuroscience | PsychENCODE Consortium; Akbarian, Schahram; Liu, Chunyu; Knowles, James A; Vaccarino, Flora M; Farnham, Peggy J; Crawford, Gregory E; Jaffe, Andrew E; Pinto, Dalila; Dracheva, Stella; Geschwind, Daniel H; Mill, Jonathan; Nairn, Angus C; Abyzov, Alexej; Pochareddy, Sirisha; Prabhakar, Shyam; Weissman, Sherman; Sullivan, Patrick F; State, Matthew W; Weng, Zhiping; Peters, Mette A; White, Kevin P; Gerstein, Mark B; Amiri, Anahita; Armoskus, Chris; Ashley-Koch, Allison E; Bae, Taejeong; Beckel-Mitchener, Andrea; Berman, Benjamin P; Coetzee, Gerhard A; Coppola, Gianfilippo; Francoeur, Nancy; Fromer, Menachem; Gao, Robert; Grennan, Kay; Herstein, Jennifer; Kavanagh, David H; Ivanov, Nikolay A; Jiang, Yan; Kitchen, Robert R; Kozlenkov, Alexey; Kundakovic, Marija; Li, Mingfeng; Li, Zhen; Liu, Shuang; Mangravite, Lara M; Mattei, Eugenio; Markenscoff-Papadimitriou, Eirene; Navarro, Fábio C P; North, Nicole; Omberg, Larsson; Panchision, David; Parikshak, Neelroop; Poschmann, Jeremie; Price, Amanda J; Purcaro, Michael; Reddy, Timothy E; Roussos, Panos; Schreiner, Shannon; Scuderi, Soraya; Sebra, Robert; Shibata, Mikihito; Shieh, Annie W; Skarica, Mario; Sun, Wenjie; Swarup, Vivek; Thomas, Amber; Tsuji, Junko; van Bakel, Harm; Wang, Daifeng; Wang, Yongjun; Wang, Kai; Werling, Donna M; Willsey, A Jeremy; Witt, Heather; Won, Hyejung; Wong, Chloe C Y; Wray, Gregory A; Wu, Emily Y; Xu, Xuming; Yao, Lijing; Senthil, Geetha; Lehner, Thomas; Sklar, Pamela; Sestan, Nenad | December 1, 2015 | Not Determined |
26575220 | Create Study | Deciphering H3K4me3 broad domains associated with gene-regulatory networks and conserved epigenomic landscapes in the human brain. | Translational psychiatry | Dincer, A; Gavin, D P; Xu, K; Zhang, B; Dudley, J T; Schadt, E E; Akbarian, S | November 17, 2015 | Not Determined |
26481319 | Create Study | Psychiatric genetics in China: achievements and challenges. | Molecular psychiatry | Liu, Chunyu; Saffen, David; Schulze, Thomas G; Burmeister, Margit; Sham, Pak Chung; Yao, Yong-Gang; Kuo, Po-Hsiu; Chen, Chao; An, Yu; Dai, Jiapei; Yue, Weihua; Li, Miao Xin; Xue, Hong; Su, Bing; Chen, Li; Shi, Yongyong; Qiao, Mingqi; Liu, Tiebang; Xia, Kun; Chan, Raymond C K | January 1, 2016 | Not Determined |
26446758 | Create Study | Demystifying the secret mission of enhancers: linking distal regulatory elements to target genes. | Critical reviews in biochemistry and molecular biology | Yao, Lijing; Berman, Benjamin P; Farnham, Peggy J | January 1, 2015 | Not Determined |
26338991 | Create Study | Impact of a cis-associated gene expression SNP on chromosome 20q11.22 on bipolar disorder susceptibility, hippocampal structure and cognitive performance. | The British journal of psychiatry : the journal of mental science | Li, Ming; Luo, Xiong-jian; Landén, Mikael; Bergen, Sarah E; Hultman, Christina M; Li, Xiao; Zhang, Wen; Yao, Yong-Gang; Zhang, Chen; Liu, Jiewei; Mattheisen, Manuel; Cichon, Sven; Mühleisen, Thomas W; Degenhardt, Franziska A; Nöthen, Markus M; Schulze, Thomas G; Grigoroiu-Serbanescu, Maria; Li, Hao; Fuller, Chris K; Chen, Chunhui; Dong, Qi; Chen, Chuansheng; Jamain, Stéphane; Leboyer, Marion; Bellivier, Frank; Etain, Bruno; Kahn, Jean-Pierre; Henry, Chantal; Preisig, Martin; Kutalik, Zoltán; Castelao, Enrique; Wright, Adam; Mitchell, Philip B; Fullerton, Janice M; Schofield, Peter R; Montgomery, Grant W; Medland, Sarah E; Gordon, Scott D; Martin, Nicholas G; MooDS Consortium; Swedish Bipolar Study Group; Rietschel, Marcella; Liu, Chunyu; Kleinman, Joel E; Hyde, Thomas M; Weinberger, Daniel R; Su, Bing | February 1, 2016 | Not Determined |
25884877 | Create Study | Loregic: a method to characterize the cooperative logic of regulatory factors. | PLoS computational biology | Wang, Daifeng; Yan, Koon-Kiu; Sisu, Cristina; Cheng, Chao; Rozowsky, Joel; Meyerson, William; Gerstein, Mark B | April 1, 2015 | Not Determined |
25849321 | Create Study | Genes with de novo mutations are shared by four neuropsychiatric disorders discovered from NPdenovo database. | Molecular psychiatry | Li, Jinchen; Cai, Tao; Jiang, Yi; Chen, Huiqian; He, Xin; Chen, Chao; Li, Xianfeng; Shao, Qianzhi; Ran, Xia; Li, Zhongshan; Xia, Kun; Liu, Chunyu; Sun, Zhong Sheng; Wu, Jinyu | February 1, 2016 | Not Determined |
25810521 | Create Study | Spatially heterogeneous choroid plexus transcriptomes encode positional identity and contribute to regional CSF production. | The Journal of neuroscience : the official journal of the Society for Neuroscience | Lun, Melody P; Johnson, Matthew B; Broadbelt, Kevin G; Watanabe, Momoko; Kang, Young-Jin; Chau, Kevin F; Springel, Mark W; Malesz, Alexandra; Sousa, André M M; Pletikos, Mihovil; Adelita, Tais; Calicchio, Monica L; Zhang, Yong; Holtzman, Michael J; Lidov, Hart G W; Sestan, Nenad; Steen, Hanno; Monuki, Edwin S; Lehtinen, Maria K | March 25, 2015 | Not Determined |
25745370 | Create Study | The use of stem cells to study autism spectrum disorder. | The Yale journal of biology and medicine | Ardhanareeswaran, Karthikeyan; Coppola, Gianfilippo; Vaccarino, Flora | March 1, 2015 | Not Determined |
25652815 | Create Study | Genetics and epigenetics of circadian rhythms and their potential roles in neuropsychiatric disorders. | Neuroscience bulletin | Liu, Chunyu; Chung, Michael | February 1, 2015 | Not Determined |
25624274 | Create Study | From trans to cis: transcriptional regulatory networks in neocortical development. | Trends in genetics : TIG | Shibata, Mikihito; Gulden, Forrest O; Sestan, Nenad | February 1, 2015 | Not Determined |
25501035 | Create Study | Developmental regulation of human cortex transcription and its clinical relevance at single base resolution. | Nature neuroscience | Jaffe, Andrew E; Shin, Jooheon; Collado-Torres, Leonardo; Leek, Jeffrey T; Tao, Ran; Li, Chao; Gao, Yuan; Jia, Yankai; Maher, Brady J; Hyde, Thomas M; Kleinman, Joel E; Weinberger, Daniel R | January 1, 2015 | Not Determined |
25464374 | Create Study | Autism spectrum disorders: from genes to neurobiology. | Current opinion in neurobiology | Willsey, A Jeremy; State, Matthew W | February 1, 2015 | Not Determined |
25453756 | Create Study | A role for noncoding variation in schizophrenia. | Cell reports | Roussos, Panos; Mitchell, Amanda C; Voloudakis, Georgios; Fullard, John F; Pothula, Venu M; Tsang, Jonathan; Stahl, Eli A; Georgakopoulos, Anastasios; Ruderfer, Douglas M; Charney, Alexander; Okada, Yukinori; Siminovitch, Katherine A; Worthington, Jane; Padyukov, Leonid; Klareskog, Lars; Gregersen, Peter K; Plenge, Robert M; Raychaudhuri, Soumya; Fromer, Menachem; Purcell, Shaun M; Brennand, Kristen J; Robakis, Nikolaos K; Schadt, Eric E; Akbarian, Schahram; Sklar, Pamela | November 20, 2014 | Not Determined |
25243493 | Create Study | Correlation between DNA methylation and gene expression in the brains of patients with bipolar disorder and schizophrenia. | Bipolar disorders | Chen, Chao; Zhang, Chunling; Cheng, Lijun; Reilly, James L; Bishop, Jeffrey R; Sweeney, John A; Chen, Hua-Yun; Gershon, Elliot S; Liu, Chunyu | December 1, 2014 | Not Determined |