Data Structure
Processed MRI Data
Version 0116883 Shared Subjects
Short Name: fmriresults01
Data Type: Imaging
Categories: Evaluated Data
No description.
Name, Type, Required, Description, Value Range, Notes
Name | Type | Required | Description | Value Range | Notes |
|---|---|---|---|---|---|
| subjectkey | GUID | Required | The NDAR Global Unique Identifier (GUID) for research subject | NDAR* | |
| src_subject_id | String | Required | Subject ID how it's defined in lab/project | ||
| origin_dataset_id | Integer | Recommended | Origin dataset Id | ||
| interview_date | Date | Required | Date on which the interview/genetic test/sampling/imaging/biospecimen was completed. MM/DD/YYYY | ||
| interview_age | Integer | Required | Age in months at the time of the interview/test/sampling/imaging. | 0::1440 | Age is rounded to chronological month. If the research participant is 15-days-old at time of interview, the appropriate value would be 0 months. If the participant is 16-days-old, the value would be 1 month. |
| sex | String | Required | Sex of subject at birth | M;F; O; NR | M = Male; F = Female; O=Other; NR = Not reported |
| experiment_id | Integer | Conditional | ID for the Experiment/settings/run | ||
| inputs | String | Recommended | Description of the inputs for the process | ||
| img03_id | Integer | Recommended | Corresponds to row_id in image03 data structure, mapping derivative to source record in image03 | ||
| file_source | String | Required | File name/location | ||
| job_name | String | Recommended | Identity of the run for pipeline processes | ||
| proc_types | String | Recommended | Type of Process | ||
| metric_files | File | Recommended | An archive of the files produced by the pipeline for metrics values | ||
| pipeline | String | Required | Pipeline name | ||
| pipeline_script | String | Required | File from pipeline used to derive output | ||
| pipeline_tools | String | Required | Specific tools used in a pipeline (i.e., FreeSurfer, FSL, ANTs) | ||
| pipeline_type | String | Required | Description of pipeline platform (i.e., LONI, NITRC-CE, NiPype) | ||
| pipeline_version | String | Required | Version assigned to pipeline | ||
| qc_fail_quest_reason | String | Required | Provide a reason that the image was determined to fail a quality control check or if the quality control check determined that the image was questionable | ||
| qc_outcome | String | Required | Provide information on the conclusion of the quality control methods regarding the quality of the image | pass;fail;questionable; undetermined; obsolete | |
| derived_files | File | Conditional | An archive of the files produced by the pipeline | ||
| scan_type | String | Required | Type of Scan | MR diffusion; fMRI; MR structural (MPRAGE); MR structural (T1); MR structural (PD); MR structural (FSPGR); MR structural (FISP); MR structural (T2); PET; ASL; microscopy; MR structural (PD, T2); MR structural (B0 map); MR structural (B1 map); single-shell DTI; multi-shell DTI; Field Map; X-Ray; static magnetic field B0; pCASL: ASL; MR: T2star; MR: FLAIR; Localizer scan; MR structural (FLASH); MR structural (MP2RAGE); MR structural (TSE); MR structural (T1, T2); 2D gradient echo; MR structural (MPnRAGE); Magnetic Resonance Spectroscopy(MRS); Neuromelanin MRI (NM-MRI); Functional Near Infrared Spectroscopy(fNIRS); MT; Magnetic Resonance Elastography (MRE); T1rho Spin-lock image; Image of Limb (IL); T2* Weighted Angiography (GE SWAN) | |
| img03_id2 | Integer | Recommended | Corresponds to row_id in image03 data structure, mapping derivative to source record in image03, number 2 | ||
| file_source2 | String | Recommended | File name/location, 2 | ||
| session_det | String | Recommended | session details | ||
| image_history | String | Recommended | Image history,f.e. transformations steps and other modifications. | ||
| manifest | Manifest | Conditional | |||
| image_description | String | Recommended | Image description, i.e. DTI, fMRI, Fast SPGR, phantom, EEG, dynamic PET | ||
| fetal_age | Integer | Recommended | Age of the fetus (i.e., gestational age) in days | 0::322 | |
| fetal_age_type | Integer | Recommended | Type of gestational age used for fetal_age | 1;2 | 1 = Postovulatory gestational age, defined as days since the last ovulation, expected term of 266 days; 2 = Postmenstrual gestational age, days since the last menstrual period, expected term of 280 days |
| img03_id3 | Integer | Recommended | Corresponds to row_id in image03 data structure, mapping derivative to source record in image03, number 3 | ||
| img03_id4 | Integer | Recommended | Corresponds to row_id in image03 data structure, mapping derivative to source record in image03, number 4 | ||
| img03_id5 | Integer | Recommended | Corresponds to row_id in image03 data structure, mapping derivative to source record in image03, number 5 |