38416640 | Create Study | Loss of GTF2I promotes neuronal apoptosis and synaptic reduction in human cellular models of neurodevelopment. | Cell reports | Adams, Jason W; Vinokur, Annabelle; de Souza, Janaína S; Austria, Charles; Guerra, Bruno S; Herai, Roberto H; Wahlin, Karl J; Muotri, Alysson R | March 26, 2024 | Not Determined |
38129659 | Create Study | TREX1 is required for microglial cholesterol homeostasis and oligodendrocyte terminal differentiation in human neural assembloids. | Molecular psychiatry | Goldberg, Gabriela; Coelho, Luisa; Mo, Guoya; Adang, Laura A; Patne, Meenakshi; Chen, Zhoutao; Garcia-Bassets, Ivan; Mesci, Pinar; Muotri, Alysson R | December 21, 2023 | Not Determined |
36253345 | Create Study | Wide spectrum of neuronal and network phenotypes in human stem cell-derived excitatory neurons with Rett syndrome-associated MECP2 mutations. | Translational psychiatry | Mok, Rebecca S F; Zhang, Wenbo; Sheikh, Taimoor I; Pradeepan, Kartik; Fernandes, Isabella R; DeJong, Leah C; Benigno, Gabriel; Hildebrandt, Matthew R; Mufteev, Marat; Rodrigues, Deivid C; Wei, Wei; Piekna, Alina; Liu, Jiajie; Muotri, Alysson R; Vincent, John B; Muller, Lyle; Martinez-Trujillo, Julio; Salter, Michael W; Ellis, James | October 18, 2022 | Not Determined |
36202289 | Create Study | Neuronal hyperexcitability and ion channel dysfunction in CDKL5-deficiency patient iPSC-derived cortical organoids. | Neurobiology of disease | Wu, Wei; Yao, Hang; Negraes, Priscilla D; Wang, Juan; Trujillo, Cleber A; de Souza, Janaina S; Muotri, Alysson R; Haddad, Gabriel G | November 1, 2022 | Not Determined |
35339359 | Create Study | Brain organoids, consciousness, ethics and moral status. | Seminars in cell & developmental biology | Jeziorski, Jacob; Brandt, Reuven; Evans, John H; Campana, Wendy; Kalichman, Michael; Thompson, Evan; Goldstein, Lawrence; Koch, Christof; Muotri, Alysson R | July 30, 2023 | Not Determined |
35081342 | Create Study | Proteomic screen reveals diverse protein transport between connected neurons in the visual system. | Cell reports | Schiapparelli, Lucio M; Sharma, Pranav; He, Hai-Yan; Li, Jianli; Shah, Sahil H; McClatchy, Daniel B; Ma, Yuanhui; Liu, Han-Hsuan; Goldberg, Jeffrey L; Yates 3rd, John R; Cline, Hollis T | January 25, 2022 | Not Determined |
34816099 | Create Study | Interactome analysis illustrates diverse gene regulatory processes associated with LIN28A in human iPS cell-derived neural progenitor cells. | iScience | Yu, Nam-Kyung; McClatchy, Daniel B; Diedrich, Jolene K; Romero, Sarah; Choi, Jun-Hyeok; Martínez-Bartolomé, Salvador; Delahunty, Claire M; Muotri, Alysson R; Yates 3rd, John R | November 19, 2021 | Relevant |
34534453 | Create Study | Clathrin packets move in slow axonal transport and deliver functional payloads to synapses. | Neuron | Ganguly, Archan; Sharma, Rohan; Boyer, Nicholas P; Wernert, Florian; Phan, Sébastien; Boassa, Daniela; Parra, Leonardo; Das, Utpal; Caillol, Ghislaine; Han, Xuemei; Yates 3rd, John R; Ellisman, Mark H; Leterrier, Christophe; Roy, Subhojit | September 15, 2021 | Not Determined |
34433918 | Create Study | Cortical organoids model early brain development disrupted by 16p11.2 copy number variants in autism. | Molecular psychiatry | Urresti, Jorge; Zhang, Pan; Moran-Losada, Patricia; Yu, Nam-Kyung; Negraes, Priscilla D; Trujillo, Cleber A; Antaki, Danny; Amar, Megha; Chau, Kevin; Pramod, Akula Bala; Diedrich, Jolene; Tejwani, Leon; Romero, Sarah; Sebat, Jonathan; Yates Iii, John R; Muotri, Alysson R; Iakoucheva, Lilia M | December 1, 2021 | Not Determined |
34083786 | Create Study | Therapeutically viable generation of neurons with antisense oligonucleotide suppression of PTB. | Nature neuroscience | Maimon, Roy; Chillon-Marinas, Carlos; Snethlage, Cedric E; Singhal, Sarthak M; McAlonis-Downes, Melissa; Ling, Karen; Rigo, Frank; Bennett, C Frank; Da Cruz, Sandrine; Hnasko, Thomas S; Muotri, Alysson R; Cleveland, Don W | August 1, 2021 | Not Determined |
33888873 | Create Study | Altered network and rescue of human neurons derived from individuals with early-onset genetic epilepsy. | Molecular psychiatry | Negraes, Priscilla D; Trujillo, Cleber A; Yu, Nam-Kyung; Wu, Wei; Yao, Hang; Liang, Nicholas; Lautz, Jonathan D; Kwok, Ellius; McClatchy, Daniel; Diedrich, Jolene; de Bartolome, Salvador Martinez; Truong, Justin; Szeto, Ryan; Tran, Timothy; Herai, Roberto H; Smith, Stephen E P; Haddad, Gabriel G; Yates 3rd, John R; Muotri, Alysson R | November 1, 2021 | Not Determined |
33727673 | Create Study | Autism-linked Cullin3 germline haploinsufficiency impacts cytoskeletal dynamics and cortical neurogenesis through RhoA signaling. | Molecular psychiatry | Amar, Megha; Pramod, Akula Bala; Yu, Nam-Kyung; Herrera, Victor Munive; Qiu, Lily R; Moran-Losada, Patricia; Zhang, Pan; Trujillo, Cleber A; Ellegood, Jacob; Urresti, Jorge; Chau, Kevin; Diedrich, Jolene; Chen, Jiaye; Gutierrez, Jessica; Sebat, Jonathan; Ramanathan, Dhakshin; Lerch, Jason P; Yates 3rd, John R; Muotri, Alysson R; Iakoucheva, Lilia M | July 1, 2021 | Not Determined |
32510229 | Create Study | Impact of the Identification Strategy on the Reproducibility of the DDA and DIA Results. | Journal of proteome research | Fernández-Costa, Carolina; Martínez-Bartolomé, Salvador; McClatchy, Daniel B; Saviola, Anthony J; Yu, Nam-Kyung; Yates 3rd, John R | August 7, 2020 | Not Determined |
31880919 | Create Study | Improving Proteomics Data Reproducibility with a Dual-Search Strategy. | Analytical chemistry | Fernández-Costa, Carolina; Martínez-Bartolomé, Salvador; McClatchy, Daniel; Yates 3rd, John R | January 21, 2020 | Not Determined |
31848365 | Create Study | Tissue-type plasminogen activator-primed human iPSC-derived neural progenitor cells promote motor recovery after severe spinal cord injury. | Scientific reports | Shiga, Yasuhiro; Shiga, Akina; Mesci, Pinar; Kwon, HyoJun; Brifault, Coralie; Kim, John H; Jeziorski, Jacob J; Nasamran, Chanond; Ohtori, Seiji; Muotri, Alysson R; Gonias, Steven L; Campana, Wendy M | December 2019 | Not Determined |
31474560 | Create Study | Complex Oscillatory Waves Emerging from Cortical Organoids Model Early Human Brain Network Development. | Cell stem cell | Trujillo, Cleber A; Gao, Richard; Negraes, Priscilla D; Gu, Jing; Buchanan, Justin; Preissl, Sebastian; Wang, Allen; Wu, Wei; Haddad, Gabriel G; Chaim, Isaac A; Domissy, Alain; Vandenberghe, Matthieu; Devor, Anna; Yeo, Gene W; Voytek, Bradley; Muotri, Alysson R | October 2019 | Not Determined |
31398040 | Create Study | Comparison of CRISPR Genomic Tagging for Affinity Purification and Endogenous Immunoprecipitation Coupled with Quantitative Mass Spectrometry To Identify the Dynamic AMPKα2 Interactome. | Journal of proteome research | Stein, Benjamin D; Herzig, Sébastien; Martínez-Bartolomé, Salvador; Lavallée-Adam, Mathieu; Shaw, Reuben J; Yates 3rd, John R | October 2019 | Not Determined |
31389776 | Create Study | Brain Organoids as Tools for Modeling Human Neurodevelopmental Disorders. | Physiology (Bethesda, Md.) | Adams JW, Cugola FR, Muotri AR | September 2019 | Not Determined |
31320591 | Create Study | Exosomes regulate neurogenesis and circuit assembly. | Proceedings of the National Academy of Sciences of the United States of America | Sharma P, Mesci P, Carromeu C, Mcclatchy DR, Schiapparelli L, Yates JR, Muotri AR, Cline HT | August 2019 | Not Determined |
30904636 | Create Study | Brain organoids as a model system for human neurodevelopment and disease. | Seminars in cell & developmental biology | Setia, Harpreet; Muotri, Alysson R | November 2019 | Not Determined |
30789962 | Create Study | Proteomic analyses reveal misregulation of LIN28 expression and delayed timing of glial differentiation in human iPS cells with MECP2 loss-of-function. | PloS one | Kim, Jean J; Savas, Jeffrey N; Miller, Meghan T; Hu, Xindao; Carromeu, Cassiano; Lavallée-Adam, Mathieu; Freitas, Beatriz C G; Muotri, Alysson R; Yates 3rd, John R; Ghosh, Anirvan | January 2019 | Not Determined |
30730291 | Create Study | Species-specific maturation profiles of human, chimpanzee and bonobo neural cells. | eLife | Marchetto, Maria C; Hrvoj-Mihic, Branka; Kerman, Bilal E; Yu, Diana X; Vadodaria, Krishna C; Linker, Sara B; Narvaiza, Iñigo; Santos, Renata; Denli, Ahmet M; Mendes, Ana Pd; Oefner, Ruth; Cook, Jonathan; McHenry, Lauren; Grasmick, Jaeson M; Heard, Kelly; Fredlender, Callie; Randolph-Moore, Lynne; Kshirsagar, Rijul; Xenitopoulos, Rea; Chou, Grace; Hah, Nasun; Muotri, Alysson R; Padmanabhan, Krishnan; Semendeferi, Katerina; Gage, Fred H | February 2019 | Not Relevant |
30699348 | Create Study | Metabolic and Organelle Morphology Defects in Mice and Human Patients Define Spinocerebellar Ataxia Type 7 as a Mitochondrial Disease. | Cell reports | Ward JM, Stoyas CA, Switonski PM, Ichou F, Fan W, Collins B, Wall CE, Adanyeguh I, Niu C, Sopher BL, Kinoshita C, Morrison RS, Durr A, Muotri AR, Evans RM, Mochel F, La Spada AR | January 2019 | Not Determined |
30655503 | Create Study | Setd5 haploinsufficiency alters neuronal network connectivity and leads to autistic-like behaviors in mice. | Translational psychiatry | Moore, Spencer M; Seidman, Jason S; Ellegood, Jacob; Gao, Richard; Savchenko, Alex; Troutman, Ty D; Abe, Yohei; Stender, Josh; Lee, Daehoon; Wang, Sicong; Voytek, Bradley; Lerch, Jason P; Suh, Hoonkyo; Glass, Christopher K; Muotri, Alysson R | January 2019 | Not Relevant |
30377071 | Create Study | Brain Organoids and the Study of Neurodevelopment. | Trends in molecular medicine | Trujillo, Cleber A; Muotri, Alysson R | December 2018 | Not Determined |
30308467 | Create Study | Understanding molecular mechanisms of disease through spatial proteomics. | Current opinion in chemical biology | Pankow, Sandra; Martínez-Bartolomé, Salvador; Bamberger, Casimir; Yates, John R | February 2019 | Not Determined |
30067761 | Create Study | An overview of Phoneutria nigriventer spider venom using combined transcriptomic and proteomic approaches. | PloS one | Diniz, Marcelo R V; Paiva, Ana L B; Guerra-Duarte, Clara; Nishiyama Jr, Milton Y; Mudadu, Mauricio A; Oliveira, Ursula de; Borges, Márcia H; Yates, John R; Junqueira-de-Azevedo, Inácio de L | January 2018 | Not Determined |
30038347 | Create Study | Quantitative analysis of newly synthesized proteins. | Nature protocols | Ma Y, Mcclatchy DB, Barkallah S, Wood WW, Yates JR | August 2018 | Not Determined |
30005169 | Create Study | Proteomics and pulse azidohomoalanine labeling of newly synthesized proteins: what are the potential applications? | Expert review of proteomics | Ma, Yuanhui; Yates 3rd, John R | July 2018 | Not Determined |
29618955 | Create Study | Content Is King: Databases Preserve the Collective Information of Science. | Journal of biomolecular techniques : JBT | Yates JR | April 2018 | Not Determined |
29412139 | Create Study | Role of the visual experience-dependent nascent proteome in neuronal plasticity. | eLife | Liu, Han-Hsuan; McClatchy, Daniel B; Schiapparelli, Lucio; Shen, Wanhua; Yates 3rd, John R; Cline, Hollis T | February 2018 | Not Determined |
29129319 | Create Study | Modeling the Interplay Between Neurons and Astrocytes in Autism Using Human Induced Pluripotent Stem Cells. | Biological psychiatry | Russo FB, Freitas BC, Pignatari GC, Fernandes IR, Sebat J, Muotri AR, Beltrão-Braga PCB | April 2018 | Not Determined |
28918504 | Create Study | Autism spectrum disorders and disease modeling using stem cells. | Cell and tissue research | Brito A, Russo FB, Muotri AR, Beltrão-Braga PCB | January 2018 | Not Determined |
28803918 | Create Study | Modeling of TREX1-Dependent Autoimmune Disease using Human Stem Cells Highlights L1 Accumulation as a Source of Neuroinflammation. | Cell stem cell | Thomas, Charles A; Tejwani, Leon; Trujillo, Cleber A; Negraes, Priscilla D; Herai, Roberto H; Mesci, Pinar; Macia, Angela; Crow, Yanick J; Muotri, Alysson R | September 2017 | Not Relevant |
28437088 | Create Study | HILAQ: A Novel Strategy for Newly Synthesized Protein Quantification. | Journal of proteome research | Ma Y, Mcclatchy DB, Barkallah S, Wood WW, Yates JR | June 2017 | Not Relevant |
28430982 | Create Study | Evidence of nuclei-encoded spliceosome mediating splicing of mitochondrial RNA. | Human molecular genetics | Herai RH, Negraes PD, Muotri AR | July 2017 | Not Determined |
27528457 | Create Study | A comprehensive and scalable database search system for metaproteomics. | BMC genomics | Chatterjee, Sandip; Stupp, Gregory S; Park, Sung Kyu Robin; Ducom, Jean-Christophe; Yates 3rd, John R; Su, Andrew I; Wolan, Dennis W | August 2016 | Not Relevant |
27509850 | Create Study | A human neurodevelopmental model for Williams syndrome. | Nature | Chailangkarn T, Trujillo CA, Freitas BC, Hrvoj-Mihic B, Herai RH, Yu DX, Brown TT, Marchetto MC, Bardy C, Mchenry L, Stefanacci L, Järvinen A, Searcy YM, Dewitt M, Wong W, Lai P, Ard MC, Hanson KL, Romero S, Jacobs B, Dale AM, Dai L, Korenberg JR, Gage FH, Bellugi U, et al. | August 2016 | Not Determined |
27378147 | Create Study | Altered proliferation and networks in neural cells derived from idiopathic autistic individuals. | Molecular psychiatry | Marchetto, Maria C; Belinson, Haim; Tian, Yuan; Freitas, Beatriz C; Fu, Chen; Vadodaria, Krishna; Beltrao-Braga, Patricia; Trujillo, Cleber A; Mendes, Ana P D; Padmanabhan, Krishnan; Nunez, Yanelli; Ou, Jing; Ghosh, Himanish; Wright, Rebecca; Brennand, Kristen; Pierce, Karen; Eichenfield, Lawrence; Pramparo, Tiziano; Eyler, Lisa; Barnes, Cynthia C; Courchesne, Eric; Geschwind, Daniel H; Gage, Fred H; Wynshaw-Boris, Anthony; Muotri, Alysson R | June 2017 | Not Determined |