NDA Help Center

Collection - General Tab

Fields available for edit on the top portion of the page include:

  • Collection Title
  • Investigators
  • Collection Description
  • Collection Phase
  • Funding Source
  • Clinical Trials

Collection Status: The visibility status of an NDA Collection.  Collection Status can be Shared or Private.  Collections in Shared status are visible to all users and can be searched in the NDA Query Tool. Private Collections are not visible to NDA users.  The Status of an NDA Collection only affects the visibility of information about the Collection (metadata) and does not relate to the status of the record-level research data in the NDA Collection.

Collection Phase: The current status of a research project submitting data to an NDA Collection, based on the timing of the award and/or the data that have been submitted.
 

  • Pre-Enrollment: The default entry made when the NDA Collection is created.
     
  • Enrolling: Data have been submitted to the NDA Collection or the NDA Data Expected initial submission date has been reached for at least one data structure category in the NDA Collection.
     
  • Data Analysis: Subject level data collection for the research project is completed and has been submitted to the NDA Collection.  The NDA Collection owner or the NDA Help Desk may set this phase when they’ve confirmed data submission is complete and submitted subject counts match at least 90% of the target enrollment numbers in the NDA Data Expected. Data submission reminders will be turned off for the NDA Collection.
     
  • Funding Completed: The NIH grant award (or awards) associated with the NDA Collection has reached its end date. NDA Collections in Funding Completed phase are assigned a subphase to indicate the status of data submission.
     
    • The Data Expected Subphase indicates that NDA expects more data will be submitted
    • The Closeout Subphase indicates the data submission is complete.
    • The Sharing Not Met Subphase indicates that data submission was not completed as expected. 

Blinded Clinical Trial Status:

  • This status is set by a Collection Owner and indicates the research project is a double blinded clinical trial.  When selected, the public view of Data Expected will show the Data Expected items and the Submission Dates, but the targeted enrollment and subjects submitted counts will not be displayed.
     
  • Targeted enrollment and subjects submitted counts are visible only to NDA Administrators and to the NDA Collection or as the NDA Collection Owner.
     
  • When an NDA Collection that is flagged Blinded Clinical Trial reaches the maximum data sharing date for that Data Repository (see https://nda.nih.gov/about/sharing-regimen.html), the embargo on Data Expected information is released.
     

Funding Source

The organization(s) responsible for providing the funding is listed here. 

Supporting Documentation

Users with Submission privileges, as well as Collection Owners, Program  Officers, and those with Administrator privileges, may upload and attach supporting documentation. By default, supporting documentation is shared to the general public, however, the option is also available to limit this information to qualified researchers only. 

Grant Information 

Identifiable details are displayed about the Project of which the Collection was derived from. You may click in the Project Number to view a full report of the Project captured by the NIH. 

Clinical Trials

Any data that is collected to support or further the research of clinical studies will be available here. Collection Owners and those with Administrator privileges may add new clinical trials. 

Frequently Asked Questions

  • When a Collection is created by NDA staff and marked as Shared, an email notification will automatically be sent to the PI(s) of the grant(s) associated with the Collection to notify them.

  • During Collection creation, NDA staff determine the appropriate Permission Group based on the type of data to be submitted, the type of access that will be available to data access users, and the information provided by the Program Officer during grant award.

  • The NDA system does not allow for a single grant to be associated with more than one Collection; therefore, a single grant will not be listed in the Grant Information section of a Collection for more than one Collection.

  • In general, each Collection is associated with only one grant; however, multiple grants may be associated if the grant has multiple competing segments for the same grant number or if multiple different grants are all working on the same project and it makes sense to hold the data in one Collection (e.g., Cooperative Agreements).

Glossary

  • Number of human subjects enrolled in an NIH-funded clinical research study. The data is provided in annual progress reports.

  • A privilege provided to a user associated with an NDA Collection or NDA Study whereby that user can perform a full range of actions including providing privileges to other users. 

  • Generally, the Collection Owner is the contact PI listed on a grant. Only one NDA user is listed as the Collection owner. Most automated emails are primarily sent to the Collection Owner.

  • The Collection Phase provides information on data submission as opposed to grant/project completion so while the Collection phase and grant/project phase may be closely related they are often different.  Collection users with Administrative Privileges are encouraged to edit the Collection Phase.  The Program Officer as listed in eRA (for NIH funded grants) may also edit this field. Changes must be saved by clicking the Save button at the bottom of the page.  This field is sortable alphabetically in ascending or descending order. Collection Phase options include: 

    • Pre-Enrollment:  A grant/project has started, but has not yet enrolled subjects.
    • Enrolling:  A grant/project has begun enrolling subjects.  Data submission is likely ongoing at this point.
    • Data Analysis:  A grant/project has completed enrolling subjects and has completed all data submissions.
    • Funding Completed:  A grant/project has reached the project end date.
  • The Collection State indicates whether the Collection is viewable and searchable.  Collections can be either Private, Shared, or an Ongoing Study.  A Collection that is shared does not necessarily have shared data as the Collection State and state of data are independent of each other.  This field can be edited by Collection users with Administrative Privileges and the Program Officer as listed in eRA (for NIH funded grants). Changes must be saved by clicking the Save button at the bottom of the page.

  • An editable field with the title of the Collection, which is often the title of the grant associated with the Collection.

  • Data Use Limitations (DULs) describe the appropriate secondary use of a dataset and are based on the original informed consent of a research participant. NDA only accepts consent-based data use limitations defined by the NIH Office of Science Policy.

  • Provides the grant number(s) for the grant(s) associated with the Collection.  The field is a hyperlink so clicking on the Grant number will direct the user to the grant information in the NIH Research Portfolio Online Reporting Tools (RePORT) page.

  • A virtual container and organization structure for data and associated documentation from one grant or one large project/consortium. It contains tools for tracking data submission and allows investigators to define a wide array of other elements that provide context for the data, including all general information regarding the data and source project, experimental parameters used to collect any event-based data contained in the Collection, methods, and other supporting documentation. They also allow investigators to link underlying data to an NDA Study, defining populations and subpopulations specific to research aims. 

  • NDA Collections may be organized by scientific similarity into NIH Research Initiatives, to facilitate query tool user experience. NIH Research Initiatives map to one or multiple Funding Opportunity Announcements. 

  • Access to shared record-level data in NDA is provisioned at the level of a Permission Group. NDA Permission Groups consist of one or multiple NDA Collections that contain data with the same subject consents.

  • Number of human subject participants to be enrolled in an NIH-funded clinical research study. The data is provided in competing applications and annual progress reports.

  • Various documents and materials to enable efficient use of the data by investigators unfamiliar with the project and may include the research protocol, questionnaires, and study manuals.  

  • The total number of unique subjects for whom data have been shared and are available for users with permission to access data.

NDA Help Center

Collection - Shared Data Tab

This tab provides a quick overview of the Data Structure title, Data Type, and Number of Subjects that are currently Shared for the Collection. The information presented in this tab is automatically generated by NDA and cannot be edited. If no information is visible on this tab, this would indicate the Collection does not have shared data or the data is private.

The shared data is available to other researchers who have permission to access data in the Collection's designated Permission Group(s). Use the Download button to get all shared data from the Collection to the Filter Cart.

 

Frequently Asked Questions

  • To see what data your project have submitted are being used by a study, simply go the Associated Studies tab of your collection.  Alternatively, you may review an NDA Study Attribution Report available on the General tab.  

  • Often it becomes more difficult to organize and format data electronically after the project has been completed and the information needed to create a GUID may not be available; however, you may still contact a program staff member at the appropriate funding institution for more information.

  • Unlike completed projects where researchers may not have the information needed to create a GUID and/or where the effort needed to organize and format data becomes prohibitive, ongoing projects have more of an opportunity to overcome these challenges.  Please contact a program staff member at the appropriate funding institution for more information.

Glossary

  • A defined organization and group of Data Elements to represent an electronic definition of a measure, assessment, questionnaire, or collection of data points.  Data structures that have been defined in the NDA Data Dictionary are available at https://ndar.nih.gov/data_dictionary.html. 

  • A grouping of data by similar characteristics such as Clinical Assessments, Omics, or Neurosignal data.

  • The term 'Shared' generally means available to others; however, there are some slightly different meanings based on what is Shared.  A Shared NDA Collection or NDA Study is viewable and searchable publicly regardless of the user's role or whether the user has an NDA account.  A Shared Collection or NDA Study does not necessarily mean that data submitted to the Collection or used in the NDA Study have been shared as this is independently determined.  Data are shared according the schedule defined in a Collection's Data Expected Tab and/or in accordance with data sharing expectations in the NDA Data Sharing Terms and Conditions.  Additionally, Supporting Documentation uploaded to a Collection may be shared independent of whether data are shared, but will only be viewable and accessible if the Collection is Shared.

NDA Help Center

fMRi

fMRI stands for functional magnetic resonance imaging. fMRI tests measure blood flow, providing detailed functional images of the brain or body. 

Acquisition
The Acquisition parameters needed for an experiment include the following:

The name of the experiment is required. Please be concise and specific as possible.
Following experiment name, selection boxes are provided for the Equipment, Software, or other items specific to the experiment type. At least one selection is required for each. If NDAR does not have the appropriate listing, select Add New to add the information provided. Following the selection boxes, provide additional information may be required depending on the experiment type. Any required items are denoted by an asterisk (*).

Block/Event Design
At least one block/event is required. Note that any fields denoted with an asterisk (*) are required. All data must be devoid of personally identifiable data, including the contents of any files attached to the experiment.

Note: To simplify the definition of multiple events, we provide an Import from XML function. This function supports importing data from all three experiment sections (Acquisition, Block/Event Design, and Post Processing), at this time files cannot be uploaded from XML A test format is provided here and our XML Schema Definition (xsd) can be found here.

Post Processing
If you have completed any post-processing on your data, please choose 'Yes' for Has Postprocessing? If not, select 'No'. Depending on this selection the remaining post-processing fields will be enabled (some of which will be required). If you are initially providing data you can select 'No', then return to the experiment to add post-processing steps at a later date when the data are being provided.

Please provide information about post-processing manipulations, i.e. artifact detection algorithms, segmentation used for post data collection, items denoted with an asterisk (*) are required.

Frequently Asked Questions

Glossary

  • This button will add all selections to the Filter Cart. 

  • This button will allow you to copy all of the Experiment details as a template for a new experiment. 

  • Adds all data from the current selections in a Collection or NDA Study to the Filter Cart.

  • This button will allow you to return to the Experiments tab. 

NDA Help Center

Collection - Submissions Tab

Users with permission to access Shared data in the Collection’s assigned Permission Group may use this tab. 

Here, you can:

  • Review your uploads to your Collection, monitor their status, and download them individually to verify their contents.
  • Download individual datasets as a secondary user of the data approved for access.
  • Identify and download datasets containing errors identified by NDA's QA/QC process for review and resolution.
  • Report suspected or discovered Personally Identifiable Information in a submission via the Actions column.

Frequently Asked Questions

Glossary

  • The default view of Datasets within a Collection's Submission tab.

  • A Submission Loading Status on a Collection's Submission Tab that indicates that an issue has prevented the successful loading of the submission.  Users should contact the NDA Help Desk for assistance at NDAHelp@mail.nih.gov.

  • The NDA has two Submission Cycles per year - January 15 and July 15.

  • An interface to notify NDA that data may not be submitted during the upcoming/current submission cycle.  

  • The unique and sequentially assigned ID for a submission (e.g. a discrete upload via the Validation and Upload Tool), which may contain any number of datafiles, Data Structures and/or Data Types, regardless of the Submission Loading Status. A single submission may be divided into multiple Datasets, which are based on Data Type.

  • The total number of unique subjects for whom data have been shared and are available for users with permission to access data.

  • The total number of unique subjects for whom data have been submitted, which includes data in both a Private State and a Shared State.

NDA Help Center

Collection - Publications Tab

The number of Publications is displayed in parentheses next to the tab name. Clicking on any of the Publication Titles will open the Publication in a new internet browsing tab. 

Collection Owners, Program Officers, and users with Submission or Administrative Privileges for the Collection may mark a publication as either Relevant or Not Relevant in the Status column. 

 

Frequently Asked Questions

  • Publications are considered relevant to a collection when the data shared is directly related to the project or collection.

  • PubMed, an online library containing journals, articles, and medical research. Sponsored by NiH and National Library of Medicine (NLM). 

Glossary

  • A link to the Create an NDA Study page that can be clicked to start creating an NDA Study with information such as the title, journal and authors automatically populated.

  • Indicates that the publication has not yet been reviewed and/or marked as Relevant or Not Relevant so it has not been determined whether an NDA Study is expected.

  • A publication that is not based on data related to the aims of the grant/project associated with the Collection or not based on any data such as a review article and, therefore, an NDA Study is not expected to be created.

  • PubMed provides citation information for biomedical and life sciences publications and is managed by the U.S. National Institutes of Health's National Library of Medicine.

  • The PUBMed ID is the unique ID number for the publication as recorded in the PubMed database.  

  • A publication that is based on data related to the aims of the grant/project associated with the Collection and, therefore, an NDA Study is expected to be created.

NDA Help Center

EEG

EEG stands for electroencencephalogram and is a test used to measure electrical activity in the brain.

Acquisition
The Acquisition parameters needed for an experiment include the following:

Name of the experiment is required. Please be concise and specific as possible.
Following experiment name, selection boxes are provided for the Equipment, Software, or other items specific to experiment type. At least one selection is required for each. If NDAR does not have the appropriate listing, select Add New to add the information provided. Following the selection boxes, provide additional information may be required depending on experiment type. Any required items are denoted by an asterisk (*).

Block/Event Design
At least one block/event is required. Note that any fields denoted with an asterisk (*) are required. All data must be devoid of personally identifiable data, including the contents of any files attached to the experiment.

Note: To simplify definition of multiple events, we provide an Import from XML function. This function supports importing data from all three experiment sections (Acquisition, Block/Event Design, and Post Processing), at this time files cannot be uploaded from XML A test format is provided here and our XML Schema Definition (xsd) can be found here.

Post Processing
If you have completed any post processing on your data, please choose 'Yes' for Has Postprocessing? If not, select 'No'. Depending on this selection the remaining post processing fields will be enabled (some of which will be required). If you are initially providing data you can select 'No', then return to the experiment to add post processing steps at a later date when the data are being provided.

Please provide information about post-processing manipulations, i.e. artifact detection algorithms, segmentation used for post data collection, items denoted with an asterisk (*) are required.

Frequently Asked Questions

Glossary

  • This button will add all selections to the Filter Cart. 

  • This button will allow you to copy all of the Experiment details as a template for a new experiment. 

  • Adds all data from the current selections in a Collection or NDA Study to the Filter Cart.

  • This button will allow you to return to the Experiments tab. 

NDA Help Center

Collection - Data Expected

The Data Expected tab displays the list of all data that NDA expects to receive in association with the Collection as defined by the contributing researcher, as well as the dates for the expected initial upload of the data, and when it is first expected to be shared, or with the research community. Above the primary table of Data Expected, any publications determined to be relevant to the data within the Collection are also displayed - members of the contributing research group can use these to define NDA Studies, connecting those papers to underlying data in NDA.

The tab is used both as a reference for those accessing shared data, providing information on what is expected and when it will be shared, and as the primary tracking mechanism for contributing projects. It is used by both contributing primary researchers, secondary researchers, and NIH Program and Grants Management staff.

Contributing researchers just getting started on their project will need to define this list by adding all of the items they are collecting under their grant and setting their schedule according to the NDA Data Sharing Regimen. If you fall into this category, you can begin by clicking "add new Data Expected" and selecting which data structures you will be using, saving the page after each change, or requesting new structures by adding and naming a new item, providing any materials NDA Data Dictionary Curators can use to help define your structure. For more information see the tutorial on creating Data Expected.

If you are a contributing researcher creating this list for the first time, or making changes to the list as your project progress, please note the following:

  • Although items you add to the list and changes you make are displayed, they are not committed to the system until you Save the entire page using the "Save" button at the bottom of your screen. Please Save after every change to ensure none of your work is lost.
  • If you attempt to add a new structure, the title you provide must be unique - if another structure exists with the same name your change will fail.
  • Adding a new structure to this list is the only way to request the creation of a new Data Dictionary definition.

 

Frequently Asked Questions

  • An NDA Data Structure is comprised of multiple Data Elements to make up an electronic definition of an assessment, measure, questionnaire, etc will have a corresponding Data Structure.

  • The NDA Data Dictionary is comprised of electronic definitions known as Data Structures.

Glossary

  • Data specific to the primary aims of the research being conducted (e.g. outcome measures, other dependent variables, observations, laboratory results, analyzed images, volumetric data, etc.) including processed images.

  • Items listed on the Data Expected list in the Collection which may be an individual and discrete Data Structure, Data Structure Category, or Data Structure Group.

  • A defined organization and group of Data Elements to represent an electronic definition of a measure, assessment, questionnaire, or collection of data points.  Data structures that have been defined in the NDA Data Dictionary are available at https://ndar.nih.gov/data_dictionary.html. 

  • An NDA term describing the affiliation of a Data Structure to a Category, which may be disease/disorder or diagnosis related (Depression, ADHD, Psychosis), specific to data type (MRI, eye tracking, omics), or type of data (physical exam, IQ).

  • A Data Item listed on the Data Expected tab of a Collection that indicates a group of Data Structures (e.g., ADOS or SCID) for which data may be submitted instead of a specific Data Structure identified by version, module, edition, etc. For example, the ADOS Data Structure Category includes every ADOS Data Structure such as ADOS Module 1, ADOS Module 2, ADOS Module 1 - 2nd Edition, etc. The SCID Data Structure Group includes every SCID Data Structure such as SCID Mania, SCID V Mania, SCID PTSD, SCID-V Diagnosis, and more. 

  • A new Data Structure category, Evaluated Data is analyzed data resulting from the use of computational pipelines in the Cloud and can be uploaded directly back to a miNDAR database.  Evaluated Data is expected to be listed as a Data Item in the Collection's Data Expected Tab.

  • Imaging+ is an NDA term which encompasses all imaging related data including, but not limited to, images (DTI, MRI, PET, Structural, Spectroscopy, etc.) as well as neurosignal data (EEG, fMRI, MEG, EGG, eye tracking, etc.) and Evaluated Data.

  • Initial Submission and Initial Share dates should be populated according to the NDA Data Sharing Terms and Conditions. Any modifications to these will go through the approval processes outlined above. Data will be shared with authorized users upon publication (via an NDA Study) or 1-2 years after the grant end date specified on the first Notice of Award, as defined in the applicable Data Sharing Terms and Conditions.

  • Initial Submission and Initial Share dates should be populated according to these NDA Data Sharing Terms and Conditions. Any modifications to these will go through the approval processes outlined above. Data for all subjects is not expected on the Initial Submission Date and modifications may be made as necessary based on the project's conduct.

  • An NDA created Data Structure used to convey basic information about the subject such as demographics, pedigree (links family GUIDs), diagnosis/phenotype, and sample location that are critical to allow for easier querying of shared data.

  • The NDA has two Submission Cycles per year - January 15 and July 15.

  • An interface to notify NDA that data may not be submitted during the upcoming/current submission cycle.  

NDA Help Center

Collection - Permissions Tab

Collection Owners, Program Officers, and users with Administrator privileges may view this tab.

The available permission groups include:

  • Query: This read-only access is generally for NIH Program Officers
  • Submission: This will grant read access and allow the user to upload data and create experiment definitions. This is for the typical contributing personnel member.
  • Administrator: In addition to the access provided to Query and Submission users, Admins can also edit the Collection itself, create or edit the Data Expected list, and edit user permissions. This access is for the PI, data managers, and anyone they wish to delegate this to.

The PI has a special designation as the Collection Owner in addition to administrator access.

Frequently Asked Questions

  • Collection Owners and Admins may assign Collection Privileges to anyone.

  • Yes, you can assign various Privileges to other users with an NDA account.

  • If you are the Collection Owner or have Admin privileges, you can view and make changes to the list of individuals who have access to the Collection on the Collection's Permissions tab.  Information on users who have access to data Shared in your Collection because they were granted access to a Permission Group is not available.

  • Staff/collaborators who are working submitting data to the Collection, checking the quality of the data, and/or analyzing data should have access for the duration of the project until all data have been submitted, NDA Studies have been created for data used in publications, and/or a collaborative relationship with the user exists.  

  • The individual listed as an Investigator on the General tab of the NDA Collection will generally be able to provide a user access to the NDA Collection.  Additional users may also have this ability if granted Administrator access to an NDA Collection; however, these users are not viewable unless your account has access to the NDA Collection.  Given this, it is best to contact the Investigator to request access to the Collection.

  • Privileges that can be assigned to a user include:
    Submission allows a user to submit data to Collection
    Query allows the user to download data from Collection even when in a Private state
    Admin is both the Submission and Query Privilege + the ability to give privileges to other users.

  • You may have staff who are working on the submission of data or other activities associated with data sharing such as the definition of the Data Expected list or NDA Experiment creation.  Also, many projects have multiple performance sites and wish to share data among the site PIs.  Submitting to the NDA facilitates access by all investigators working on a project even before data have been shared with other users.  You can control who gets access to data while in a Private state.

Glossary

  • A privilege provided to a user associated with an NDA Collection or NDA Study whereby that user can perform a full range of actions including providing privileges to other users. 

  • Access to shared record-level data in NDA is provisioned at the level of a Permission Group. NDA Permission Groups consist of one or multiple NDA Collections that contain data with the same subject consents.

NDA Help Center

Eye Tracking

EyeTracking tests follow the movement of the eye. The visual trajectory or focus can help determine predictions and assist in diagnoses. 

Acquisition
The Acquisition parameters needed for an experiment include the following:

The name of the experiment is required. Please be concise and specific as possible.
Following experiment name, selection boxes are provided for the Equipment, Software, or other items specific to the experiment type. At least one selection is required for each. If NDAR does not have the appropriate listing, select Add New to add the information provided. Following the selection boxes, provide additional information may be required depending on the experiment type. Any required items are denoted by an asterisk (*).

Block/Event Design
At least one block/event is required. Note that any fields denoted with an asterisk (*) are required. All data must be devoid of personally identifiable data, including the contents of any files attached to the experiment.

Note: To simplify the definition of multiple events, we provide an Import from XML function. This function supports importing data from all three experiment sections (Acquisition, Block/Event Design, and Post Processing), at this time files cannot be uploaded from XML A test format is provided here and our XML Schema Definition (xsd) can be found here.

Post Processing
If you have completed any post-processing on your data, please choose 'Yes' for Has Postprocessing? If not, select 'No'. Depending on this selection the remaining post-processing fields will be enabled (some of which will be required). If you are initially providing data you can select 'No', then return to the experiment to add post-processing steps at a later date when the data are being provided.

Please provide information about post-processing manipulations, i.e. artifact detection algorithms, segmentation used for post data collection, items denoted with an asterisk (*) are required.

Frequently Asked Questions

Glossary

  • This button will add all selections to the Filter Cart. 

  • This button will allow you to copy all of the Experiment details as a template for a new experiment. 

  • Adds all data from the current selections in a Collection or NDA Study to the Filter Cart.

  • This button will allow you to return to the Experiments tab. 

NDA Help Center

Collection - Experiments Tab

The number of Experiments included is displayed in parentheses next to the tab name. You may download all experiments associated with the Collection via the Download button. You may view individual experiments by clicking the Experiment Name and add them to the Filter Cart via the Add to Cart button.

Collection Owners, Program Officers, and users with Submission or Administrative Privileges for the Collection may create or edit an Experiment.

Please note: The creation of an NDA Experiment does not necessarily mean that data collected, according to the defined Experiment, has been submitted or shared.

Frequently Asked Questions

  • Yes -see the “Copy” button in the bottom left when viewing an experiment. There are two actions that can be performed via this button:

    1. Copy the experiment with intent for modifications.  
    2. Associate the experiment to the collection. No modifications can be made to the experiment.

     

Glossary

  • An Experiment must be Approved before data using the associated Experiment_ID may be uploaded.

  • The ID number automatically generated by NDA which must be included in the appropriate file when uploading data to link the Experiment Definition to the subject record.

NDA Help Center

Omics

Omics is a collective group of technologies, related to a field of study in Biology such as Genomics or proteomics. 

Experiment Parameters

To define an Omics experiment, provide a meaningful name and select a single molecule. The standard molecules are listed. However, if you are doing proteomic or environmental experiments, simply “Add New” and the new selection will be created. Only one value for molecule is permitted.

Next the technology (box 2) associated with the molecule will be presented along with its application. Again, only one selection is possible. If you wish to see all of NDAR’s options for any one box, Select “Show All”.

Platform

Continue to select the Platform (box 3).

Extraction

Next, the Extraction Protocol (box 4) and Kits (box 5) are presented based upon the Molecule selected and the Processing Protocol (box 6) and Kits (box 7) are presented based upon the Molecule and Technology Application (Box 1 and 2)

Processing

Note that for each of these (boxes 4, 5, 6, and 7) multiple selections are possible.

Additional Information

Lastly, the Software (box 8) and Equipment (box 9) is expected.

 

Once saved, the experiment will be associated with the Collection and by using the returned Experiment_ID, the NDA makes it possible to associate the experiment meta data directly with the data from the experiment.

Frequently Asked Questions

Glossary

  • This button will add all selections to the Filter Cart. 

  • This button will allow you to copy all of the Experiment details as a template for a new experiment. 

  • Adds all data from the current selections in a Collection or NDA Study to the Filter Cart.

  • This button will allow you to return to the Experiments tab. 

NDA Help Center

Filter Cart

Viewable at the top right of NDA pages, the Filter Cart is a temporary holder for filters and data they select. Filters are added to the Workspace first, before being submitted to The Filter Cart. Data selected by filters in the Filter Cart can be added to a Data Package or an NDA Study from the Data Packaging Page, by clicking the 'Create Data Package / Add Data to Study' button.

The filter cart supports combining multiple filters together, and depending on filter type will use "AND" or "OR"  when combining filters.

Multiple selections from the same filter type will result in those selections being applied with an ‘OR’ condition. For example, if you add an NDA Collection Filter with selections for both collections 2112 and 2563 to an empty Workspace, the subjects from NDA Collection 2112 ‘OR’ NDA Collection 2563 will be added to your Workspace even if a subject is in both NDA Collections. You can then add other NDA Collections to your Workspace which further extends the ‘OR’ condition.

If a different filter type is added to your Workspace, or a filter has already been submitted to the Filter Cart, the operation then performs a logical ‘AND’ operation. This means that given the subjects returned from the first filter, only those subjects that matched the first filter are returned by the second filter (i.e., subjects that satisfied both filters).

When combining other filters with the GUID filter, please note the GUID filter should be added last. Otherwise, preselected data may be lost. For example, a predefined filter from Featured Datasets may select a subset of data available for a subject. When combined with a GUID filter for the same subject, the filter cart will contain all data available from that subject, data structure, and dataset; this may be more data than was selected in the predefined filter for that subject. Again, you should add the GUID Filter as the last filter to your cart. This ensures 'AND' logic between filters and will limit results to the subjects, data structures, and datasets already included in your filter cart.

Note that only the subjects specific to your filter will be added to your Filter Cart and only on data shared with the research community. Other data for those same subjects may exist (i.e., within another NDA Collection, associated with a data structure that was not requested in the query, etc.). So, users should select ‘Find all Subjects Data’ to identify all data for those specific subjects. 

Additional Tips:

  • You may query the data without an account, but to gain access you will need to create an NDA user account and apply for access.  Most data access requires that you or your lab are sponsored by an NIH recognized institution with Federal Wide Assurance (FWA).  Without access, you will not be able to obtain individual-level data. 

    Once you have selected data of interest you can:
  • Create a data package - This allows you to specify format for access/download
  • Assign to Study Cohort - Associate the data to an NDA Study allowing for a DOI to be generated and the data to be linked directly to a finding, publication, or data release. 
  • Find All Subject Data - Depending on filter types being used, not all data associated with a subject will be selected.  Data may be restricted by data structure, NDA Collection, or outcome variables (e.g., NDA Study). ‘Find All Data’ expands the fliter criteria by replacing all filters in your Filter Cart with a single Query by GUID filter for all subjects selected by those filters.

    Please Note:
  • When running a query, it may take a moment to populate the Filter Cart. Queries happen in the background so you can define other queries during this time. 
  • When you add your first filter, all data associated with your query will be added to the Filter Cart (e.g., a Concept, an NDA Collection, a Data Structure/Element, etc.). As you add additional filters, they will also display in the Filter Cart. Only the name of filter will be shown in the Filter Cart, not the underlying structures. 
  • Information about the contents of the Filter Cart can be seen by clicking "Edit”.
  • Once your results appear in the Filter Cart, you can create a data package or assign subjects to a study by selecting the 'Package/Assign to Study' option. You can also 'Edit' or 'Clear' filters.
     

Frequently Asked Questions

  • The Filter Cart currently employs basic AND/OR Boolean logic. A single filter may contain multiple selections for that filter type, e.g., a single NDA Study filter might contain NDA Study 1 and NDA Study 2. A subject that is in EITHER 1 OR 2 will be returned.  Adding multiple filters to the cart, regardless of type, will AND the result of each filter.  If NDA Study 1 and NDA Study 2 are added as individual filters, data for a subject will only be selected if the subject is included in  BOTH 1 AND 2.

    When combining other filters with the GUID filter, please note the GUID filter should be added last. Otherwise, preselected data may be lost. For example, a predefined filter from Featured Datasets may select a subset of data available for a subject. When combined with a GUID filter for the same subject, the filter cart will contain all data available from that subject, data structure, and dataset; this may be more data than was selected in the predefined filter for that subject. Again, you should add the GUID Filter as the last filter to your cart. This ensures 'AND' logic between filters and will limit results to the subjects, data structures, and datasets already included in your filter cart.

  • Viewable at the top right of NDA pages, the Filter Cart is a temporary holder of data identified by the user, through querying or browsing, as being of some potential interest. The Filter Cart is where you send the data from your Workspace after it has been filtered.

  • After filters are added to the Filter Cart, users have options to ‘Create a Package’ for download, ‘Associate to Study Cohort’, or ‘Find All Subject Data’. Selecting ‘Find All Subject Data’ identifies and pulls all data for the subjects into the Filter Cart. Choosing ‘Create a Package’ allows users to package and name their query information for download. Choosing ‘Associate to Study Cohort’ gives users the opportunity to choose the Study Cohort they wish to associate this data.

Glossary

  • Once your filter cart contains the subjects of interest, select Create Data Package/Assign to Data Study which will provide options for accessing item level data and/or assigning to a study.  

  • Once queries have been added to your workspace, the next step is to Submit the Filters in the workspace to the Filter Cart.  This process runs the queries selected, saving the results within a filter cart attached to your account.  

  • The Workspace within the General Query Tool is a holding area where you can review your pending filters prior to adding them to Filter Cart. Therefore, the first step in accessing data is to select one or more items and move it into the Workspace. 

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Collection - Associated Studies

Clicking on the Study Title will open the study details in a new internet browser tab. The Abstract is available for viewing, providing the background explanation of the study, as provided by the Collection Owner. 

Primary v. Secondary Analysis: The Data Usage column will have one of these two choices. An associated study that is listed as being used for Primary Analysis indicates at least some and potentially all of the data used was originally collected by the creator of the NDA Study. Secondary Analysis indicates the Study owner was not involved in the collection of data, and may be used as supporting data. 

Private v. Shared State: Studies that remain private indicate the associated study is only available to users who are able to access the collection. A shared study is accessible to the general public. 

Frequently Asked Questions

  • Studies are associated to the Collection automatically when the data is defined in the Study. 

Glossary

  • A tab in a Collection that lists the NDA Studies that have been created using data from that Collection including both Primary and Secondary Analysis NDA Studies.

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1 Numbers reported are subjects by age
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Format should be in the following format: Activity Code, Institute Abbreviation, and Serial Number. Grant Type, Support Year, and Suffix should be excluded. For example, grant 1R01MH123456-01A1 should be entered R01MH123456

Please select an experiment type below

Collection - Use Existing Experiment

To associate an experiment to the current collection, just select an axperiment from the table below then click the associate experiment button to persist your changes (saving the collection is not required). Note that once an experiment has been associated to two or more collections, the experiment will not longer be editable.

The table search feature is case insensitive and targets the experiment id, experiment name and experiment type columns. The experiment id is searched only when the search term entered is a number, and filtered using a startsWith comparison. When the search term is not numeric the experiment name is used to filter the results.

SelectExperiment IdExperiment NameExperiment Type
  • Select One
  • EEG
  • EGG
  • Eye Tracking
  • Omics
  • fMRI
Created On
1873child fNIRS (5/7yr)EEG12/03/2021
1872Child ERP (5/7yr)EEG12/03/2021
1871TREAT-BD_fMRIfMRI12/03/2021
1870iCereMotorPilot_MotorTaskfMRI12/02/2021
1869RRAY fMRI ScanfMRI11/27/2021
1867Resting StatefMRI11/22/2021
1866MNA fMRIfMRI11/16/2021
1865Motion AftereffectsEye Tracking11/05/2021
1864Tilt Aftereffects (TAE)Eye Tracking11/05/2021
1863Negative Afterimages (AI)Eye Tracking11/05/2021
1862Face-Matching TaskfMRI11/03/2021
1861Resting StatefMRI11/03/2021
1860CARIT (Go/NoGo Task)fMRI11/03/2021
1859PCR-free sequencingOmics10/29/2021
1858GNG Anger, Gender, Happy Tasks- EEGEEG10/15/2021
1857PVDM, imaging sessionEye Tracking10/14/2021
1856PVDM, imaging sessionfMRI10/13/2021
1855PVDM, behavioral sessionEye Tracking10/13/2021
1854Cerebellar Dysfunction in Autism: resting state fMRIfMRI10/13/2021
1852snRNAseq_controls_DLPFC/sgACCOmics09/30/2021
1851Reappraisal Emotion Regulation Task - V2fMRI09/22/2021
1850Reappraisal Emotion Regulation Task - V1fMRI09/22/2021
1849Stop-Signal Arrows - Randomization BfMRI09/22/2021
1848Stop-Signal Arrows - Randomization AfMRI09/22/2021
1847NPU Threat Countdown Short - V2fMRI09/22/2021
1846NPU Threat Countdown Short - V1fMRI09/22/2021
1836Alcohol Cue ReactivityEEG09/02/2021
1835Doors Reward ParadigmEEG08/30/2021
1834Flanker ArrowsEEG08/30/2021
1833Transcriptomic data of Clozapine-treated Ngn2-induced Human Excitatory NeuronsOmics08/20/2021
1830Illumina Global Screening ArrayOmics08/02/2021
1829Single-cell multiome sequencing: ATAC-seqOmics07/26/2021
1828Single-cell multiome sequencing - RNA-seqOmics07/26/2021
1827scATACseqOmics07/26/2021
1826scRNAseqOmics07/26/2021
1825Fetal Resting-state fMRI Brain MasksfMRI07/23/2021
1824Apex of Cognitive ControlfMRI07/22/2021
1823Face adaptationEye Tracking07/21/2021
1822Presaccadic AttentionEye Tracking07/21/2021
1821templefMRI07/19/2021
1820parvizi_eeg_145EEG07/16/2021
1819parvizi_eeg_166EEG07/16/2021
1818parvizi_eeg_164EEG07/16/2021
1817parvizi_eeg_165EEG07/16/2021
1816parvizi_eeg_162EEG07/16/2021
1815parvizi_eeg_161EEG07/16/2021
1814eeg_parvizi_160EEG07/16/2021
1813parvizi_eeg_159EEG07/16/2021
1812Singleton distractor rejectionEEG07/16/2021
1810InterlayerfMRI07/15/2021
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Collection Summary Collection Charts
Collection Title Collection Investigators Collection Description
HCP-YA Mapping the Human Connectome: Structure, Function, and Heritability
David Van Essen 
This project will characterize adult human brain circuitry, including its variability and its relation to behavior and genetics. To achieve this ambitious objective, a broad-based multi-institutional consortium of distinguished investigators will acquire cutting-edge neuroimaging data in 1,200 healthy adult humans along with behavioral performance data and blood samples for genotyping. The main cohort of subjects will be twins plus non-twin siblings - a strategy that enables powerful analyses of heritability and genetic underpinnings of specific brain circuits. Comprehensive connectivity maps will be generated for each individual and for population averages using sophisticated data analysis methods. This human connectome will be expressed relative to functional subdivisions (parcels) defined by connectivity and by classical architectonic methods. Data from these maps will reveal fundamental aspects of brain network organization. A powerful, user-friendly informatics platform will be implemented to facilitate the management, analysis, visualization, and sharing of these rich and complex datasets. Because these tools and datasets will have Immediate and long range potential to influence neuroscience research in health and disease, extensive outreach efforts are planned for promoting their widespread awareness and usage. The imaging modalities include three types of magnetic resonance imaging: (i) diffusion imaging using HARDI methods to map structural connectivity; (ii) resting-state fMRI (R-fMRI) to reveal maps of functional connectivity; (iii) task-fMRI (T-fMRI) to reveal brain activation patterns associated with a broad set of behavioral tasks. Magneto-encephalography (MEG) and also EEG will be used to characterize dynamic patterns of neural activity that can be related to structural and functional connectivity maps. Imaging will benefit from a customized 3T scanner developed for this project and ultimately installed at Washington University, a new 7T scanner at the University of Minnesota, and improved pulse sequences and custom coils to be implemented during the project's optimization phase. By scanning all subjects at 3T and subsets at 7T and with MEG, the complementary strengths of each imaging modality will be utilized and the overall impact of the data collection and analysis strategy will be maximized. Consortium members have contributed greatly to the recent progress in data acquisition and analysis strategies that make the Human Connectome Project technically feasible. Major additional advances anticipated during the project's optimization phase will lead to unprecedented fidelity of the structural and functional connectivity maps to be obtained during the production phase.
Connectome Coordination Facility
Adolescent Brain Cognitive Development (ABCD) / Connectome Coordination Facility (CCF)
Human Connectome Project (HCP)
Funding Completed
Data Expected
Shared
No
$14,676,370.00
0
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NIH - Extramural None


U54MH091657-01 Mapping the Human Connectome: Structure, Function, and Heritability 09/15/2010 08/31/2015 1440 4238 WASHINGTON UNIVERSITY $14,676,370.00

IDNameCreated DateStatusType
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Collection Owners and those with Collection Administrator permission, may edit a collection. The following is currently available for Edit on this page:

Shared Data

Data structures with the number of subjects submitted and shared are provided.

Collection Owners and those with Collection Administrator permission, may edit a collection. The following is currently available for Edit on this page:

Publications

Publications relevant to NDA data are listed below. Most displayed publications have been associated with the grant within Pubmed. Use the "+ New Publication" button to add new publications. Publications relevant/not relevant to data expected are categorized. Relevant publications are then linked to the underlying data by selecting the Create Study link. Study provides the ability to define cohorts, assign subjects, define outcome measures and lists the study type, data analysis and results. Analyzed data and results are expected in this way.

PubMed IDStudyTitleJournalAuthorsDateStatus
34652937Create StudyWhen makes you unique: Temporality of the human brain fingerprint.Science advancesVan De Ville, Dimitri; Farouj, Younes; Preti, Maria Giulia; Liégeois, Raphaël; Amico, EnricoOctober 15, 2021Not Determined
34624639Create StudyConnectivity correlates to predict essential tremor deep brain stimulation outcome: Evidence for a common treatment pathway.NeuroImage. ClinicalMiddlebrooks, Erik H; Okromelidze, Lela; Wong, Joshua K; Eisinger, Robert S; Burns, Mathew R; Jain, Ayushi; Lin, Hsin-Pin; Yu, Jun; Opri, Enrico; Horn, Andreas; Goede, Lukas L; Foote, Kelly D; Okun, Michael S; Quiñones-Hinojosa, Alfredo; Uitti, Ryan J; Grewal, Sanjeet S; Tsuboi, TakashiOctober 4, 2021Not Determined
34524842Create StudySocial prediction modulates activity of macaque superior temporal cortex.Science advancesRoumazeilles, Lea; Schurz, Matthias; Lojkiewiez, Mathilde; Verhagen, Lennart; Schüffelgen, Urs; Marche, Kevin; Mahmoodi, Ali; Emberton, Andrew; Simpson, Kelly; Joly, Olivier; Khamassi, Mehdi; Rushworth, Matthew F S; Mars, Rogier B; Sallet, JérômeSeptember 17, 2021Not Determined
34506912Create StudyBehavioral, Anatomical and Heritable Convergence of Affect and Cognition in Superior Frontal Cortex.NeuroImageKraljević, Nevena; Schaare, H Lina; Eickhoff, Simon B; Kochunov, Peter; Yeo, B T Thomas; Kharabian Masouleh, Shahrzad; Valk, Sofie LNovember 1, 2021Not Determined
34478442Create StudyLearning brain dynamics for decoding and predicting individual differences.PLoS computational biologyMisra, Joyneel; Surampudi, Srinivas Govinda; Venkatesh, Manasij; Limbachia, Chirag; Jaja, Joseph; Pessoa, LuizSeptember 1, 2021Not Determined
34475518Create StudyFunctionnectome as a framework to analyse the contribution of brain circuits to fMRI.Communications biologyNozais, Victor; Forkel, Stephanie J; Foulon, Chris; Petit, Laurent; Thiebaut de Schotten, MichelSeptember 2, 2021Not Determined
34473058Create StudyStimulus-specific plasticity in human visual gamma-band activity and functional connectivity.eLifeStauch, Benjamin J; Peter, Alina; Schuler, Heike; Fries, PascalAugust 24, 2021Not Determined
34465598Create StudyInner Hemispheric and Interhemispheric Connectivity Balance in the Human Brain.The Journal of neuroscience : the official journal of the Society for NeuroscienceKrupnik, Ronnie; Yovel, Yossi; Assaf, YanivOctober 6, 2021Not Determined
34461233Create StudyVentral intermediate nucleus structural connectivity-derived segmentation: anatomical reliability and variability.NeuroImageBertino, Salvatore; Basile, Gianpaolo Antonio; Bramanti, Alessia; Ciurleo, Rosella; Tisano, Adriana; Anastasi, Giuseppe Pio; Milardi, Demetrio; Cacciola, AlbertoNovember 1, 2021Not Determined
34435748Create StudyTime-varying measures of cerebral network centrality correlate with visual saliency during movie watching.Brain and behaviorOgawa, AkitoshiSeptember 1, 2021Not Determined
34423588Create StudyPrediction of life satisfaction from resting-state functional connectome.Brain and behaviorItahashi, Takashi; Kosibaty, Neda; Hashimoto, Ryu-Ichiro; Aoki, Yuta YSeptember 1, 2021Not Determined
34416549Create StudyAlcohol use severity and the neural correlates of the effects of sleep disturbance on sustained visual attention.Journal of psychiatric researchLi, Guangfei; Chen, Yu; Tang, Xiaoying; Li, Chiang-Shan ROctober 1, 2021Not Determined
34390877Create StudyPhysiological noise modeling in fMRI based on the pulsatile component of photoplethysmograph.NeuroImageKassinopoulos, Michalis; Mitsis, Georgios DNovember 15, 2021Not Determined
34389659Create StudyInfratentorial MRI Findings in Rasmussen Encephalitis Suggest Primary Cerebellar Involvement.Neurology(R) neuroimmunology & neuroinflammationReiter, Johannes T; David, Bastian; Enders, Selma; Prillwitz, Conrad C; Bauer, Tobias; Atalay, Deniz; Tietze, Anna; Kaindl, Angela M; Keil, Vera; Radbruch, Alexander; Weber, Bernd; Becker, Albert J; Elger, Christian E; Surges, Rainer; Rüber, TheodorNovember 1, 2021Not Determined
34389442Create StudyAutomated olfactory bulb segmentation on high resolutional T2-weighted MRI.NeuroImageEstrada, Santiago; Lu, Ran; Diers, Kersten; Zeng, Weiyi; Ehses, Philipp; Stöcker, Tony; Breteler, Monique M B; Reuter, MartinNovember 15, 2021Not Determined
34385454Create StudyHeritability and interindividual variability of regional structure-function coupling.Nature communicationsGu, Zijin; Jamison, Keith Wakefield; Sabuncu, Mert Rory; Kuceyeski, AmyAugust 12, 2021Not Determined
34342582Create StudyPhysiological and motion signatures in static and time-varying functional connectivity and their subject identifiability.eLifeXifra-Porxas, Alba; Kassinopoulos, Michalis; Mitsis, Georgios DAugust 3, 2021Not Determined
34342581Create StudyCortical magnification in human visual cortex parallels task performance around the visual field.eLifeBenson, Noah C; Kupers, Eline R; Barbot, Antoine; Carrasco, Marisa; Winawer, JonathanAugust 3, 2021Not Determined
34329959Create StudyFunctional co-activation of the default mode network in APOE ε4-carriers: A replication study.NeuroImageMentink, Lara J; Guimarães, João P O F T; Faber, Myrthe; Sprooten, Emma; Olde Rikkert, Marcel G M; Haak, Koen V; Beckmann, Christian FOctober 15, 2021Not Determined
34323639Create StudyAre Sex Differences in Human Brain Structure Associated With Sex Differences in Behavior?Psychological sciencevan Eijk, Liza; Zhu, Dajiang; Couvy-Duchesne, Baptiste; Strike, Lachlan T; Lee, Anthony J; Hansell, Narelle K; Thompson, Paul M; de Zubicaray, Greig I; McMahon, Katie L; Wright, Margaret J; Zietsch, Brendan PAugust 1, 2021Not Determined
34290240Create StudyDistinct cortical systems reinstate the content and context of episodic memories.Nature communicationsKragel, James E; Ezzyat, Youssef; Lega, Bradley C; Sperling, Michael R; Worrell, Gregory A; Gross, Robert E; Jobst, Barbara C; Sheth, Sameer A; Zaghloul, Kareem A; Stein, Joel M; Kahana, Michael JJuly 21, 2021Not Determined
34290088Create StudyGlobal waves synchronize the brain''s functional systems with fluctuating arousal.Science advancesRaut, Ryan V; Snyder, Abraham Z; Mitra, Anish; Yellin, Dov; Fujii, Naotaka; Malach, Rafael; Raichle, Marcus EJuly 1, 2021Not Determined
34260891Create StudyEvidence for normal extra-axial cerebrospinal fluid volume in autistic males from middle childhood to adulthood.NeuroImagePeterson, Madeline; Prigge, Molly B D; Bigler, Erin D; Zielinski, Brandon; King, Jace B; Lange, Nicholas; Alexander, Andrew; Lainhart, Janet E; Nielsen, Jared AOctober 15, 2021Not Determined
34250639Create StudyModelling state-transition dynamics in resting-state brain signals by the hidden Markov and Gaussian mixture models.The European journal of neuroscienceEzaki, Takahiro; Himeno, Yu; Watanabe, Takamitsu; Masuda, NaokiAugust 1, 2021Not Determined
34244483Create StudyGenetic influences on hub connectivity of the human connectome.Nature communicationsArnatkeviciute, Aurina; Fulcher, Ben D; Oldham, Stuart; Tiego, Jeggan; Paquola, Casey; Gerring, Zachary; Aquino, Kevin; Hawi, Ziarih; Johnson, Beth; Ball, Gareth; Klein, Marieke; Deco, Gustavo; Franke, Barbara; Bellgrove, Mark A; Fornito, AlexJuly 9, 2021Not Determined
34237444Create StudyExploring MEG brain fingerprints: Evaluation, pitfalls, and interpretations.NeuroImageSareen, Ekansh; Zahar, Sélima; Ville, Dimitri Van De; Gupta, Anubha; Griffa, Alessandra; Amico, EnricoOctober 15, 2021Not Determined
34237443Create StudyDelineating between-subject heterogeneity in alpha networks with Spatio-Spectral Eigenmodes.NeuroImageQuinn, Andrew J; Green, Gary G R; Hymers, MarkOctober 15, 2021Not Determined
34224851Create StudyWithin node connectivity changes, not simply edge changes, influence graph theory measures in functional connectivity studies of the brain.NeuroImageLuo, Wenjing; Greene, Abigail S; Constable, R ToddOctober 15, 2021Not Determined
34194050Create StudyThe ENIGMA Toolbox: multiscale neural contextualization of multisite neuroimaging datasets.Nature methodsLarivière, Sara; Paquola, Casey; Park, Bo-Yong; Royer, Jessica; Wang, Yezhou; Benkarim, Oualid; Vos de Wael, Reinder; Valk, Sofie L; Thomopoulos, Sophia I; Kirschner, Matthias; Lewis, Lindsay B; Evans, Alan C; Sisodiya, Sanjay M; McDonald, Carrie R; Thompson, Paul M; Bernhardt, Boris CJuly 1, 2021Not Determined
34184812Create StudyNonlinear manifold learning in functional magnetic resonance imaging uncovers a low-dimensional space of brain dynamics.Human brain mappingGao, Siyuan; Mishne, Gal; Scheinost, DustinOctober 1, 2021Not Determined
34171497Create StudySmooth graph learning for functional connectivity estimation.NeuroImageGao, Siyuan; Xia, Xinyue; Scheinost, Dustin; Mishne, GalOctober 1, 2021Not Determined
34170066Create StudyThe impact of graph construction scheme and community detection algorithm on the repeatability of community and hub identification in structural brain networks.Human brain mappingDimitriadis, Stavros I; Messaritaki, Eirini; K Jones, DerekSeptember 1, 2021Not Determined
34161915Create StudyFiltering in tractography using autoencoders (FINTA).Medical image analysisLegarreta, Jon Haitz; Petit, Laurent; Rheault, François; Theaud, Guillaume; Lemaire, Carl; Descoteaux, Maxime; Jodoin, Pierre-MarcAugust 1, 2021Not Determined
34146709Create StudyMyelo- and cytoarchitectonic microstructural and functional human cortical atlases reconstructed in common MRI space.NeuroImagePijnenburg, Rory; Scholtens, Lianne H; Ardesch, Dirk Jan; de Lange, Siemon C; Wei, Yongbin; van den Heuvel, Martijn POctober 1, 2021Not Determined
34140357Create StudyCommon genetic variation influencing human white matter microstructure.Science (New York, N.Y.)Zhao, Bingxin; Li, Tengfei; Yang, Yue; Wang, Xifeng; Luo, Tianyou; Shan, Yue; Zhu, Ziliang; Xiong, Di; Hauberg, Mads E; Bendl, Jaroslav; Fullard, John F; Roussos, Panagiotis; Li, Yun; Stein, Jason L; Zhu, HongtuJune 18, 2021Not Determined
34127795Create StudyInter-individual body mass variations relate to fractionated functional brain hierarchies.Communications biologyPark, Bo-Yong; Park, Hyunjin; Morys, Filip; Kim, Mansu; Byeon, Kyoungseob; Lee, Hyebin; Kim, Se-Hong; Valk, Sofie L; Dagher, Alain; Bernhardt, Boris CJune 14, 2021Not Determined
34111516Create StudyFrontal cortical regions associated with attention connect more strongly to central than peripheral V1.NeuroImageSims, Sara A; Demirayak, Pinar; Cedotal, Simone; Visscher, Kristina MSeptember 1, 2021Not Determined
34110075Create StudyFunction-structure coupling: White matter functional magnetic resonance imaging hyper-activation associates with structural integrity reductions in schizophrenia.Human brain mappingJiang, Yuchao; Duan, Mingjun; Li, Xiangkui; Huang, Huan; Zhao, Guocheng; Li, Xuan; Li, Shicai; Song, Xufeng; He, Hui; Yao, Dezhong; Luo, ChengAugust 15, 2021Not Determined
34089872Create StudyAutomatic recognition of specific local cortical folding patterns.NeuroImageBorne, Léonie; Rivière, Denis; Cachia, Arnaud; Roca, Pauline; Mellerio, Charles; Oppenheim, Catherine; Mangin, Jean-FrançoisSeptember 1, 2021Not Determined
34087365Create StudyUsing connectomics for predictive assessment of brain parcellations.NeuroImageAlbers, Kristoffer J; Ambrosen, Karen S; Liptrot, Matthew G; Dyrby, Tim B; Schmidt, Mikkel N; Mørup, MortenSeptember 1, 2021Not Determined
34087040Create StudyMotor and higher-order functions topography of the human dentate nuclei identified with tractography and clustering methods.Human brain mappingPalesi, Fulvia; Ferrante, Matteo; Gaviraghi, Marta; Misiti, Anastasia; Savini, Giovanni; Lascialfari, Alessandro; D'Angelo, Egidio; Gandini Wheeler-Kingshott, Claudia A MSeptember 1, 2021Not Determined
34082280Create StudyGeometric deep learning on brain shape predicts sex and age.Computerized medical imaging and graphics : the official journal of the Computerized Medical Imaging SocietyBesson, Pierre; Parrish, Todd; Katsaggelos, Aggelos K; Bandt, S KathleenJuly 1, 2021Not Determined
34080889Create StudyEvolution, Emotion, and Episodic Engagement.The American journal of psychiatryPine, Daniel S; Wise, Steven P; Murray, Elisabeth AAugust 1, 2021Not Determined
34042511Create StudyConductance-Based Structural Brain Connectivity in Aging and Dementia.Brain connectivityFrau-Pascual, Aina; Augustinack, Jean; Varadarajan, Divya; Yendiki, Anastasia; Salat, David H; Fischl, Bruce; Aganj, ImanSeptember 1, 2021Not Determined
34033913Create StudyInter-subject and inter-parcellation variability of resting-state whole-brain dynamical modeling.NeuroImagePopovych, Oleksandr V; Jung, Kyesam; Manos, Thanos; Diaz-Pier, Sandra; Hoffstaedter, Felix; Schreiber, Jan; Yeo, B T Thomas; Eickhoff, Simon BAugust 1, 2021Not Determined
34020016Create StudyBrain-environment alignment during movie watching predicts fluid intelligence and affective function in adulthood.NeuroImagePetrican, Raluca; Graham, Kim S; Lawrence, Andrew DSeptember 1, 2021Not Determined
34020011Create StudyThe coupling of BOLD signal variability and degree centrality underlies cognitive functions and psychiatric diseases.NeuroImageSheng, Jintao; Zhang, Liang; Feng, Junjiao; Liu, Jing; Li, Anqi; Chen, Wei; Shen, Yuedi; Wang, Jinhui; He, Yong; Xue, GuiAugust 15, 2021Not Determined
34015372Create StudyPosterior Precuneus is Highly Connected to Medial Temporal Lobe Revealed by Tractography and White Matter Dissection.NeuroscienceJitsuishi, Tatsuya; Yamaguchi, AtsushiJuly 1, 2021Not Determined
34008924Create StudyTesting the extreme male brain hypothesis: Is autism spectrum disorder associated with a more male-typical brain?Autism research : official journal of the International Society for Autism Researchvan Eijk, Liza; Zietsch, Brendan PAugust 1, 2021Not Determined
34001886Create StudyTranscriptome-wide association analysis of brain structures yields insights into pleiotropy with complex neuropsychiatric traits.Nature communicationsZhao, Bingxin; Shan, Yue; Yang, Yue; Yu, Zhaolong; Li, Tengfei; Wang, Xifeng; Luo, Tianyou; Zhu, Ziliang; Sullivan, Patrick; Zhao, Hongyu; Li, Yun; Zhu, HongtuMay 17, 2021Not Determined
34000402Create StudyDiffusion-informed spatial smoothing of fMRI data in white matter using spectral graph filters.NeuroImageAbramian, David; Larsson, Martin; Eklund, Anders; Aganj, Iman; Westin, Carl-Fredrik; Behjat, HamidAugust 15, 2021Not Determined
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33915512Create StudyPerceived friendship and binge drinking in young adults: A study of the Human Connectome Project data.Drug and alcohol dependenceLi, Guangfei; Chen, Yu; Le, Thang M; Zhornitsky, Simon; Wang, Wuyi; Dhingra, Isha; Zhang, Sheng; Tang, Xiaoying; Li, Chiang-Shan RJuly 1, 2021Not Determined
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33836270Create StudyMesoscale hierarchical organization of primary somatosensory cortex captured by resting-state-fMRI in humans.NeuroImageNgo, Geoffrey N; Haak, Koen V; Beckmann, Christian F; Menon, Ravi SJuly 15, 2021Not Determined
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33827936Create StudyDistinct Functional and Structural Connectivity of the Human Hand-Knob Supported by Intraoperative Findings.The Journal of neuroscience : the official journal of the Society for NeuroscienceSimone, Luciano; Viganò, Luca; Fornia, Luca; Howells, Henrietta; Leonetti, Antonella; Puglisi, Guglielmo; Bellacicca, Andrea; Bello, Lorenzo; Cerri, GabriellaMay 12, 2021Not Determined
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33816717Create StudyHigh-resolution fMRI at 7 Tesla: challenges, promises and recent developments for individual-focused fMRI studies.Current opinion in behavioral sciencesViessmann, Olivia; Polimeni, Jonathan RAugust 1, 2021Not Determined
33813262Create StudyLesion Quantification Toolkit: A MATLAB software tool for estimating grey matter damage and white matter disconnections in patients with focal brain lesions.NeuroImage. ClinicalGriffis, Joseph C; Metcalf, Nicholas V; Corbetta, Maurizio; Shulman, Gordon LJanuary 1, 2021Not Determined
33813007Create StudyMovie-watching outperforms rest for functional connectivity-based prediction of behavior.NeuroImageFinn, Emily S; Bandettini, Peter AJuly 15, 2021Not Determined
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33769700Create StudyBlood pressure-related differences in brain health between young African Americans and Caucasian Americans.Physiological reportsWon, Junyeon; Ranadive, Sushant M; Callow, Daniel D; Chen, Shuo; Carson Smith, JMarch 1, 2021Not Determined
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33621695Create StudyThe neurocognitive correlates of brain entropy estimated by resting state fMRI.NeuroImageWang, ZeMay 15, 2021Not Determined
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33519356Create StudyMulti-Hops Functional Connectivity Improves Individual Prediction of Fusiform Face Activation via a Graph Neural Network.Frontiers in neuroscienceWu, Dongya; Li, Xin; Feng, JunJanuary 1, 2020Not Determined
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33483325Create StudyA Whole-Cortex Probabilistic Diffusion Tractography Connectome.eNeuroRosen, Burke Q; Halgren, EricJanuary 1, 2021Not Determined
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33372144Create StudyTopographic connectivity reveals task-dependent retinotopic processing throughout the human brain.Proceedings of the National Academy of Sciences of the United States of AmericaKnapen, TomasJanuary 12, 2021Not Determined
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33335266Create StudyAutomated diffusion-based parcellation of the hypothalamus reveals subunit-specific associations with obesity.Scientific reportsSpindler, Melanie; Özyurt, Jale; Thiel, Christiane MDecember 17, 2020Not Determined
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33314443Create StudyExtended-amygdala intrinsic functional connectivity networks: A population study.Human brain mappingBerry, Samuel C; Wise, Richard G; Lawrence, Andrew D; Lancaster, Thomas MApril 15, 2021Not Determined
33303766Create StudyDiffuse neural coupling mediates complex network dynamics through the formation of quasi-critical brain states.Nature communicationsMüller, Eli J; Munn, Brandon R; Shine, James MDecember 10, 2020Not Determined
33301939Create StudyEfficient and accurate EAP imaging from multi-shell dMRI with micro-structure adaptive convolution kernels and dual Fourier Integral Transforms (MiSFIT).NeuroImageTristán-Vega, Antonio; Aja-Fernández, SantiagoFebruary 15, 2021Not Determined
33300306Create StudyNeural correlates of reward processing: Functional dissociation of two components within the ventral striatum.Brain and behaviorGrill, Filip; Nyberg, Lars; Rieckmann, AnnaFebruary 1, 2021Not Determined
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33271268Create StudyStructure-function coupling in the human connectome: A machine learning approach.NeuroImageSarwar, T; Tian, Y; Yeo, B T T; Ramamohanarao, K; Zalesky, AFebruary 1, 2021Not Determined
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33252079Create StudyConstruction of MRI-Based Alzheimer''s Disease Score Based on Efficient 3D Convolutional Neural Network: Comprehensive Validation on 7,902 Images from a Multi-Center Dataset.Journal of Alzheimer''s disease : JADYee, Evangeline; Ma, Da; Popuri, Karteek; Wang, Lei; Beg, Mirza Faisal; The Alzheimer’s Disease Neuroimaging Initiative; The Australian Imaging Biomarkers and Lifestyle flagship study of ageingJanuary 1, 2021Not Determined
33227567Create StudyMultimodal hippocampal and amygdala subfield volumetry in polygenic risk for Alzheimer''s disease.Neurobiology of agingMurray, Amy N; Chandler, Hannah L; Lancaster, Thomas MFebruary 1, 2021Not Determined
33208365Create StudyNetwork-based atrophy modeling in the common epilepsies: A worldwide ENIGMA study.Science advancesLarivière, Sara; Rodríguez-Cruces, Raúl; Royer, Jessica; Caligiuri, Maria Eugenia; Gambardella, Antonio; Concha, Luis; Keller, Simon S; Cendes, Fernando; Yasuda, Clarissa; Bonilha, Leonardo; Gleichgerrcht, Ezequiel; Focke, Niels K; Domin, Martin; von Podewills, Felix; Langner, Soenke; Rummel, Christian; Wiest, Roland; Martin, Pascal; Kotikalapudi, Raviteja; O'Brien, Terence J; Sinclair, Benjamin; Vivash, Lucy; Desmond, Patricia M; Alhusaini, Saud; Doherty, Colin P; Cavalleri, Gianpiero L; Delanty, Norman; Kälviäinen, Reetta; Jackson, Graeme D; Kowalczyk, Magdalena; Mascalchi, Mario; Semmelroch, Mira; Thomas, Rhys H; Soltanian-Zadeh, Hamid; Davoodi-Bojd, Esmaeil; Zhang, Junsong; Lenge, Matteo; Guerrini, Renzo; Bartolini, Emanuele; Hamandi, Khalid; Foley, Sonya; Weber, Bernd; Depondt, Chantal; Absil, Julie; Carr, Sarah J A; Abela, Eugenio; Richardson, Mark P; Devinsky, Orrin; Severino, Mariasavina; Striano, Pasquale; Tortora, Domenico; Hatton, Sean N; Vos, Sjoerd B; Duncan, John S; Whelan, Christopher D; Thompson, Paul M; Sisodiya, Sanjay M; Bernasconi, Andrea; Labate, Angelo; McDonald, Carrie R; Bernasconi, Neda; Bernhardt, Boris CNovember 1, 2020Not Determined
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33183133Create StudyBody mass index, time of day and genetics affect perivascular spaces in the white matter.Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and MetabolismBarisano, Giuseppe; Sheikh-Bahaei, Nasim; Law, Meng; Toga, Arthur W; Sepehrband, FarshidJuly 1, 2021Not Determined
33169880Create StudyConstrained spherical deconvolution of nonspherically sampled diffusion MRI data.Human brain mappingMorez, Jan; Sijbers, Jan; Vanhevel, Floris; Jeurissen, BenFebruary 1, 2021Not Determined
33166643Create StudyConfidence Sets for Cohen''s d effect size images.NeuroImageBowring, Alexander; Telschow, Fabian J E; Schwartzman, Armin; Nichols, Thomas EFebruary 1, 2021Not Determined
33152602Create StudyDetect and correct bias in multi-site neuroimaging datasets.Medical image analysisWachinger, Christian; Rieckmann, Anna; Pölsterl, Sebastian; Alzheimer’s Disease Neuroimaging Initiative and the Australian Imaging Biomarkers and Lifestyle flagship study of ageingJanuary 1, 2021Not Determined
33151703Create StudyToward a hierarchical model of social cognition: A neuroimaging meta-analysis and integrative review of empathy and theory of mind.Psychological bulletinSchurz, Matthias; Radua, Joaquim; Tholen, Matthias G; Maliske, Lara; Margulies, Daniel S; Mars, Rogier B; Sallet, Jerome; Kanske, PhilippMarch 1, 2021Not Determined
33147511Create StudyCharacterisation of white matter asymmetries in the healthy human brain using diffusion MRI fixel-based analysis.NeuroImageHonnedevasthana Arun, Arush; Connelly, Alan; Smith, Robert E; Calamante, FernandoJanuary 15, 2021Not Determined
33146610Create StudyConvergence of cortical types and functional motifs in the human mesiotemporal lobe.eLifePaquola, Casey; Benkarim, Oualid; DeKraker, Jordan; Larivière, Sara; Frässle, Stefan; Royer, Jessica; Tavakol, Shahin; Valk, Sofie; Bernasconi, Andrea; Bernasconi, Neda; Khan, Ali; Evans, Alan C; Razi, Adeel; Smallwood, Jonathan; Bernhardt, Boris CNovember 4, 2020Not Determined
33130272Create StudyMeasurement reliability for individual differences in multilayer network dynamics: Cautions and considerations.NeuroImageYang, Zhen; Telesford, Qawi K; Franco, Alexandre R; Lim, Ryan; Gu, Shi; Xu, Ting; Ai, Lei; Castellanos, Francisco X; Yan, Chao-Gan; Colcombe, Stan; Milham, Michael PJanuary 15, 2021Not Determined
33130271Create StudyPlis de passage in the superior temporal sulcus: Morphology and local connectivity.NeuroImageBodin, C; Pron, A; Le Mao, M; Régis, J; Belin, P; Coulon, OJanuary 15, 2021Not Determined
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33075560Create StudyRegionconnect: Rapidly extracting standardized brain connectivity information in voxel-wise neuroimaging studies.NeuroImageQi, Xiaoxiao; Arfanakis, KonstantinosJanuary 15, 2021Not Determined
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33038538Create StudySignal diffusion along connectome gradients and inter-hub routing differentially contribute to dynamic human brain function.NeuroImagePark, Bo-Yong; Vos de Wael, Reinder; Paquola, Casey; Larivière, Sara; Benkarim, Oualid; Royer, Jessica; Tavakol, Shahin; Cruces, Raul R; Li, Qiongling; Valk, Sofie L; Margulies, Daniel S; Mišić, Bratislav; Bzdok, Danilo; Smallwood, Jonathan; Bernhardt, Boris CJanuary 1, 2021Not Determined
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33018326Create StudyMulti-Shell D-MRI Reconstruction via Residual Learning utilizing Encoder-Decoder Network with Attention (MSR-Net).Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International ConferenceJha, Ranjeet Ranjan; Nigam, Aditya; Bhavsar, Arnav; Pathak, Sudhir K; Schneider, Walter; Rathish, KJuly 1, 2020Not Determined
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32989295Create StudyTopographic organization of the human subcortex unveiled with functional connectivity gradients.Nature neuroscienceTian, Ye; Margulies, Daniel S; Breakspear, Michael; Zalesky, AndrewNovember 1, 2020Not Determined
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32276062Create StudyTransient spectral events in resting state MEG predict individual task responses.NeuroImageBecker, R; Vidaurre, D; Quinn, A J; Abeysuriya, R G; Parker Jones, O; Jbabdi, S; Woolrich, M WJuly 15, 2020Not Determined
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31268418Create StudyInter-individual differences in human brain structure and morphology link to variation in demographics and behavior.eLifeLlera, Alberto; Wolfers, Thomas; Mulders, Peter; Beckmann, Christian FJuly 3, 2019Not Determined
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30260456Create StudyA Connectomic Atlas of the Human Cerebrum-Chapter 5: The Insula and Opercular Cortex.Operative neurosurgery (Hagerstown, Md.)Baker, Cordell M; Burks, Joshua D; Briggs, Robert G; Conner, Andrew K; Glenn, Chad A; Robbins, Justin M; Sheets, John R; Sali, Goksel; McCoy, Tressie M; Battiste, James D; O'Donoghue, Daniel L; Sughrue, Michael EDecember 1, 2018Not Determined
30260450Create StudyA Connectomic Atlas of the Human Cerebrum-Chapter 12: Tractographic Description of the Middle Longitudinal Fasciculus.Operative neurosurgery (Hagerstown, Md.)Conner, Andrew K; Briggs, Robert G; Rahimi, Meherzad; Sali, Goksel; Baker, Cordell M; Burks, Joshua D; Glenn, Chad A; Battiste, James D; Sughrue, Michael EDecember 1, 2018Not Determined
30260447Create StudyA Connectomic Atlas of the Human Cerebrum-Chapter 6: The Temporal Lobe.Operative neurosurgery (Hagerstown, Md.)Baker, Cordell M; Burks, Joshua D; Briggs, Robert G; Milton, Camille K; Conner, Andrew K; Glenn, Chad A; Sali, Goksel; McCoy, Tressie M; Battiste, James D; O'Donoghue, Daniel L; Sughrue, Michael EDecember 1, 2018Not Determined
30260446Create StudyA Connectomic Atlas of the Human Cerebrum-Chapter 3: The Motor, Premotor, and Sensory Cortices.Operative neurosurgery (Hagerstown, Md.)Baker, Cordell M; Burks, Joshua D; Briggs, Robert G; Sheets, John R; Conner, Andrew K; Glenn, Chad A; Sali, Goksel; McCoy, Tressie M; Battiste, James D; O'Donoghue, Daniel L; Sughrue, Michael EDecember 1, 2018Not Determined
30260441Create StudyA Connectomic Atlas of the Human Cerebrum-Chapter 4: The Medial Frontal Lobe, Anterior Cingulate Gyrus, and Orbitofrontal Cortex.Operative neurosurgery (Hagerstown, Md.)Baker, Cordell M; Burks, Joshua D; Briggs, Robert G; Stafford, Jordan; Conner, Andrew K; Glenn, Chad A; Sali, Goksel; McCoy, Tressie M; Battiste, James D; O'Donoghue, Daniel L; Sughrue, Michael EDecember 1, 2018Not Determined
30260440Create StudyA Connectomic Atlas of the Human Cerebrum-Chapter 14: Tractographic Description of the Frontal Aslant Tract.Operative neurosurgery (Hagerstown, Md.)Briggs, Robert G; Conner, Andrew K; Rahimi, Meherzad; Sali, Goksel; Baker, Cordell M; Burks, Joshua D; Glenn, Chad A; Battiste, James D; Sughrue, Michael EDecember 1, 2018Not Determined
30260439Create StudyA Connectomic Atlas of the Human Cerebrum-Chapter 15: Tractographic Description of the Uncinate Fasciculus.Operative neurosurgery (Hagerstown, Md.)Briggs, Robert G; Rahimi, Meherzad; Conner, Andrew K; Sali, Goksel; Baker, Cordell M; Burks, Joshua D; Glenn, Chad A; Battiste, James D; Sughrue, Michael EDecember 1, 2018Not Determined
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27626966Create StudyThe Lamellar Structure of the Brain Fiber Pathways.Neural computationGalinsky, Vitaly L; Frank, Lawrence RNovember 1, 2016Not Determined
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27571304Create StudyAuditory and visual connectivity gradients in frontoparietal cortex.Human brain mappingBraga, Rodrigo M; Hellyer, Peter J; Wise, Richard J S; Leech, RobertJanuary 1, 2017Not Determined
27571276Create StudyEvaluation of Denoising Strategies to Address Motion-Correlated Artifacts in Resting-State Functional Magnetic Resonance Imaging Data from the Human Connectome Project.Brain connectivityBurgess, Gregory C; Kandala, Sridhar; Nolan, Dan; Laumann, Timothy O; Power, Jonathan D; Adeyemo, Babatunde; Harms, Michael P; Petersen, Steven E; Barch, Deanna MNovember 1, 2016Not Determined
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27561736Create StudyFunctional brain networks related to individual differences in human intelligence at rest.Scientific reportsHearne, Luke J; Mattingley, Jason B; Cocchi, LucaAugust 26, 2016Not Determined
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27408790Create StudyRecreational marijuana use impacts white matter integrity and subcortical (but not cortical) morphometry.NeuroImage. ClinicalOrr, Joseph M; Paschall, Courtnie J; Banich, Marie TJanuary 1, 2016Not Determined
27392357Create StudyMulti-Tissue Decomposition of Diffusion MRI Signals via Sparse-Group Estimation.IEEE transactions on image processing : a publication of the IEEE Signal Processing SocietyPew-Thian Yap; Yong Zhang; Dinggang ShenSeptember 1, 2016Not Determined
27391481Create StudyTemporal Non-Local Means Filtering Reveals Real-Time Whole-Brain Cortical Interactions in Resting fMRI.PloS oneBhushan, Chitresh; Chong, Minqi; Choi, Soyoung; Joshi, Anand A; Haldar, Justin P; Damasio, Hanna; Leahy, Richard MJanuary 1, 2016Not Determined
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27357684Create StudyCluster failure: Why fMRI inferences for spatial extent have inflated false-positive rates.Proceedings of the National Academy of Sciences of the United States of AmericaEklund, Anders; Nichols, Thomas E; Knutsson, HansJuly 12, 2016Not Determined
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27341204Create StudyTask-Related Edge Density (TED)-A New Method for Revealing Dynamic Network Formation in fMRI Data of the Human Brain.PloS oneLohmann, Gabriele; Stelzer, Johannes; Zuber, Verena; Buschmann, Tilo; Margulies, Daniel; Bartels, Andreas; Scheffler, KlausJanuary 1, 2016Not Determined
27282476Create StudyMulti-compartment microscopic diffusion imaging.NeuroImageKaden, Enrico; Kelm, Nathaniel D; Carson, Robert P; Does, Mark D; Alexander, Daniel COctober 1, 2016Not Determined
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27231194Create StudyCharacterizing dynamic local functional connectivity in the human brain.Scientific reportsDeng, Lifu; Sun, Junfeng; Cheng, Lin; Tong, ShanbaoMay 27, 2016Not Determined
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27116610Create StudyTemporal Changes in Local Functional Connectivity Density Reflect the Temporal Variability of the Amplitude of Low Frequency Fluctuations in Gray Matter.PloS oneTomasi, D; Shokri-Kojori, E; Volkow, N DJanuary 1, 2016Not Determined
27071694Create StudyFusion in diffusion MRI for improved fibre orientation estimation: An application to the 3T and 7T data of the Human Connectome Project.NeuroImageSotiropoulos, Stamatios N; Hernández-Fernández, Moisés; Vu, An T; Andersson, Jesper L; Moeller, Steen; Yacoub, Essa; Lenglet, Christophe; Ugurbil, Kamil; Behrens, Timothy E J; Jbabdi, SaadJuly 1, 2016Not Determined
27043358Create StudyMAPL: Tissue microstructure estimation using Laplacian-regularized MAP-MRI and its application to HCP data.NeuroImageFick, Rutger H J; Wassermann, Demian; Caruyer, Emmanuel; Deriche, RachidJuly 1, 2016Not Determined
27019380Create StudyDynamic regional phase synchrony (DRePS): An Instantaneous Measure of Local fMRI Connectivity Within Spatially Clustered Brain Areas.Human brain mappingOmidvarnia, Amir; Pedersen, Mangor; Walz, Jennifer M; Vaughan, David N; Abbott, David F; Jackson, Graeme DMay 1, 2016Not Determined
26991474Create StudyResting-state functional connectivity of the human habenula in healthy individuals: Associations with subclinical depression.Human brain mappingEly, Benjamin A; Xu, Junqian; Goodman, Wayne K; Lapidus, Kyle A; Gabbay, Vilma; Stern, Emily RJuly 1, 2016Not Determined
26981099Create StudyConnectivity differences between adult male and female patients with attention deficit hyperactivity disorder according to resting-state functional MRI.Neural regeneration researchPark, Bo-Yong; Park, HyunjinJanuary 1, 2016Not Determined
26972752Create StudyDorsal Anterior Cingulate, Medial Superior Frontal Cortex, and Anterior Insula Show Performance Reporting-Related Late Task Control Signals.Cerebral cortex (New York, N.Y. : 1991)Neta, Maital; Nelson, Steven M; Petersen, Steven EMarch 1, 2017Not Determined
26930054Create StudyD-BRAIN: Anatomically Accurate Simulated Diffusion MRI Brain Data.PloS onePerrone, Daniele; Jeurissen, Ben; Aelterman, Jan; Roine, Timo; Sijbers, Jan; Pizurica, Aleksandra; Leemans, Alexander; Philips, WilfriedJanuary 1, 2016Not Determined
26914259Create StudyHuman Connectome-Based Tractographic Atlas of the Brainstem Connections and Surgical Approaches.NeurosurgeryMeola, Antonio; Yeh, Fang-Cheng; Fellows-Mayle, Wendy; Weed, Jared; Fernandez-Miranda, Juan CSeptember 1, 2016Not Determined
26903402Create StudyCommon Measures for National Institute of Mental Health Funded Research.Biological psychiatryBarch, Deanna M; Gotlib, Ian H; Bilder, Robert M; Pine, Daniel S; Smoller, Jordan W; Brown, C Hendricks; Huggins, Wayne; Hamilton, Carol; Haim, Adam; Farber, Gregory KJune 15, 2016Not Determined
26855977Create StudyPredicting Activation Across Individuals with Resting-State Functional Connectivity Based Multi-Atlas Label Fusion.Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted InterventionLangs, Georg; Golland, Polina; Ghosh, Satrajit SOctober 1, 2015Not Determined
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26845558Create StudyEnsemble Tractography.PLoS computational biologyTakemura, Hiromasa; Caiafa, Cesar F; Wandell, Brian A; Pestilli, FrancoFebruary 1, 2016Not Determined
26826517Create StudyHuman habenula segmentation using myelin content.NeuroImageKim, Joo-won; Naidich, Thomas P; Ely, Benjamin A; Yacoub, Essa; De Martino, Federico; Fowkes, Mary E; Goodman, Wayne K; Xu, JunqianApril 15, 2016Not Determined
26822700Create StudyThe importance of correcting for signal drift in diffusion MRI.Magnetic resonance in medicineVos, Sjoerd B; Tax, Chantal M W; Luijten, Peter R; Ourselin, Sebastien; Leemans, Alexander; Froeling, MartijnJanuary 1, 2017Not Determined
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26792267Create StudyHuman brain networks function in connectome-specific harmonic waves.Nature communicationsAtasoy, Selen; Donnelly, Isaac; Pearson, JoelJanuary 1, 2016Not Determined
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26748411Create StudyInsula reactivity to negative stimuli is associated with daily cigarette use: A preliminary investigation using the Human Connectome Database.Drug and alcohol dependenceDias, N R; Peechatka, A L; Janes, A CFebruary 1, 2016Not Determined
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26676835Create StudyEarly Childhood Depression and Alterations in the Trajectory of Gray Matter Maturation in Middle Childhood and Early Adolescence.JAMA psychiatryLuby, Joan L; Belden, Andy C; Jackson, Joshua J; Lessov-Schlaggar, Christina N; Harms, Michael P; Tillman, Rebecca; Botteron, Kelly; Whalen, Diana; Barch, Deanna MJanuary 1, 2016Not Determined
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26667600Create StudyPhase-cycled simultaneous multislice balanced SSFP imaging with CAIPIRINHA for efficient banding reduction.Magnetic resonance in medicineWang, Yi; Shao, Xingfeng; Martin, Thomas; Moeller, Steen; Yacoub, Essa; Wang, Danny J JDecember 1, 2016Not Determined
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26617955Create StudyCORRECTING INHOMOGENEITY-INDUCED DISTORTION IN FMRI USING NON-RIGID REGISTRATION.Proceedings. IEEE International Symposium on Biomedical ImagingChambers, Micah C; Bhushan, Chitresh; Haldar, Justin P; Leahy, Richard M; Shattuck, David WApril 1, 2015Not Determined
26613367Create StudySubdivision of Broca''s region based on individual-level functional connectivity.The European journal of neuroscienceJakobsen, Estrid; Böttger, Joachim; Bellec, Pierre; Geyer, Stefan; Rübsamen, Rudolf; Petrides, Michael; Margulies, Daniel SFebruary 1, 2016Not Determined
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26574120Create StudySharing the wealth: Neuroimaging data repositories.NeuroImageEickhoff, Simon; Nichols, Thomas E; Van Horn, John D; Turner, Jessica AJanuary 1, 2016Not Determined
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26549300Create StudyRealistic simulation of artefacts in diffusion MRI for validating post-processing correction techniques.NeuroImageGraham, Mark S; Drobnjak, Ivana; Zhang, HuiJanuary 15, 2016Not Determined
26536135Create StudyStructural and Functional Brain Connectivity of People with Obesity and Prediction of Body Mass Index Using Connectivity.PloS onePark, Bo-yong; Seo, Jongbum; Yi, Juneho; Park, HyunjinJanuary 1, 2015Not Determined
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26447583Create StudyRhythms for Cognition: Communication through Coherence.NeuronFries, PascalOctober 7, 2015Not Determined
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26414616Create StudyA positive-negative mode of population covariation links brain connectivity, demographics and behavior.Nature neuroscienceSmith, Stephen M; Nichols, Thomas E; Vidaurre, Diego; Winkler, Anderson M; Behrens, Timothy E J; Glasser, Matthew F; Ugurbil, Kamil; Barch, Deanna M; Van Essen, David C; Miller, Karla LNovember 1, 2015Not Determined
26388711Create StudyDynamic connectivity detection: an algorithm for determining functional connectivity change points in fMRI data.Frontiers in neuroscienceXu, Yuting; Lindquist, Martin AJanuary 1, 2015Not Determined
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26344547Create StudyNetwork structure of brain atrophy in de novo Parkinson''s disease.eLifeZeighami, Yashar; Ulla, Miguel; Iturria-Medina, Yasser; Dadar, Mahsa; Zhang, Yu; Larcher, Kevin Michel-Herve; Fonov, Vladimir; Evans, Alan C; Collins, D Louis; Dagher, AlainJanuary 1, 2015Not Determined
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26230510Create StudySurface-Based Display of Volume-Averaged Cerebellar Imaging Data.PloS oneDiedrichsen, Jörn; Zotow, EwaJanuary 1, 2015Not Determined
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26221690Create StudyMeasuring Asymmetric Interactions in Resting State Brain Networks.Information processing in medical imaging : proceedings of the ... conferenceJoshi, Anand A; Salloum, Ronald; Bhushan, Chitresh; Leahy, Richard MJanuary 1, 2015Not Determined
26221668Create StudyJoint Spectral Decomposition for the Parcellation of the Human Cerebral Cortex Using Resting-State fMRI.Information processing in medical imaging : proceedings of the ... conferenceArslan, Salim; Parisot, Sarah; Rueckert, DanielJanuary 1, 2015Not Determined
26212711Create StudyFunctional System and Areal Organization of a Highly Sampled Individual Human Brain.NeuronLaumann, Timothy O; Gordon, Evan M; Adeyemo, Babatunde; Snyder, Abraham Z; Joo, Sung Jun; Chen, Mei-Yen; Gilmore, Adrian W; McDermott, Kathleen B; Nelson, Steven M; Dosenbach, Nico U F; Schlaggar, Bradley L; Mumford, Jeanette A; Poldrack, Russell A; Petersen, Steven EAugust 5, 2015Not Determined
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26132764Create StudyGraph Theoretical Analysis Reveals: Women''s Brains Are Better Connected than Men''s.PloS oneSzalkai, Balázs; Varga, Bálint; Grolmusz, VinceJanuary 1, 2015Not Determined
26074200Create StudyMulti-level block permutation.NeuroImageWinkler, Anderson M; Webster, Matthew A; Vidaurre, Diego; Nichols, Thomas E; Smith, Stephen MDecember 1, 2015Not Determined
26043324Create StudyThe human connectome in health and psychopathology.World psychiatry : official journal of the World Psychiatric Association (WPA)Van Essen, David C; Barch, Deanna MJune 1, 2015Not Determined
25988402Create StudyLinking contemporary high resolution magnetic resonance imaging to the von Economo legacy: A study on the comparison of MRI cortical thickness and histological measurements of cortical structure.Human brain mappingScholtens, Lianne H; de Reus, Marcel A; van den Heuvel, Martijn PAugust 1, 2015Not Determined
25974332Create StudyQuantitative mapping of the per-axon diffusion coefficients in brain white matter.Magnetic resonance in medicineKaden, Enrico; Kruggel, Frithjof; Alexander, Daniel CApril 1, 2016Not Determined
25966471Create StudyFiber Orientation and Compartment Parameter Estimation From Multi-Shell Diffusion Imaging.IEEE transactions on medical imagingTran, Giang; Shi, YonggangNovember 1, 2015Not Determined
25965401Create StudyIn Vivo 7T MRI of the Non-Human Primate Brainstem.PloS oneZitella, Laura M; Xiao, YiZi; Teplitzky, Benjamin A; Kastl, Daniel J; Duchin, Yuval; Baker, Kenneth B; Vitek, Jerrold L; Adriany, Gregor; Yacoub, Essa; Harel, Noam; Johnson, Matthew DJanuary 1, 2015Not Determined
25941391Create StudySpecialization and integration of functional thalamocortical connectivity in the human infant.Proceedings of the National Academy of Sciences of the United States of AmericaToulmin, Hilary; Beckmann, Christian F; O'Muircheartaigh, Jonathan; Ball, Gareth; Nongena, Pumza; Makropoulos, Antonios; Ederies, Ashraf; Counsell, Serena J; Kennea, Nigel; Arichi, Tomoki; Tusor, Nora; Rutherford, Mary A; Azzopardi, Denis; Gonzalez-Cinca, Nuria; Hajnal, Joseph V; Edwards, A DavidMay 19, 2015Not Determined
25934470Create StudyConnectomeDB--Sharing human brain connectivity data.NeuroImageHodge, Michael R; Horton, William; Brown, Timothy; Herrick, Rick; Olsen, Timothy; Hileman, Michael E; McKay, Michael; Archie, Kevin A; Cler, Eileen; Harms, Michael P; Burgess, Gregory C; Glasser, Matthew F; Elam, Jennifer S; Curtiss, Sandra W; Barch, Deanna M; Oostenveld, Robert; Larson-Prior, Linda J; Ugurbil, Kamil; Van Essen, David C; Marcus, Daniel SJanuary 1, 2016Not Determined
25891219Create StudyVoxel-Based Meta-Analytical Evidence of Structural Disconnectivity in Major Depression and Bipolar Disorder.Biological psychiatryWise, Toby; Radua, Joaquim; Nortje, Gareth; Cleare, Anthony J; Young, Allan H; Arnone, DaniloFebruary 15, 2016Not Determined
25869856Create StudySimulating disease propagation across white matter connectome reveals anatomical substrate for neuropathology staging in amyotrophic lateral sclerosis.NeuroImageSchmidt, Ruben; de Reus, Marcel A; Scholtens, Lianne H; van den Berg, Leonard H; van den Heuvel, Martijn PJanuary 1, 2016Not Determined
25862487Create StudyThe Budapest Reference Connectome Server v2.0.Neuroscience lettersSzalkai, Balázs; Kerepesi, Csaba; Varga, Bálint; Grolmusz, VinceMay 19, 2015Not Determined
25862259Create StudyA symmetric multivariate leakage correction for MEG connectomes.NeuroImageColclough, G L; Brookes, M J; Smith, S M; Woolrich, M WAugust 15, 2015Not Determined
25837601Create StudySimultaneous multi-slice Turbo-FLASH imaging with CAIPIRINHA for whole brain distortion-free pseudo-continuous arterial spin labeling at 3 and 7 T.NeuroImageWang, Yi; Moeller, Steen; Li, Xiufeng; Vu, An T; Krasileva, Kate; Ugurbil, Kamil; Yacoub, Essa; Wang, Danny J JJune 1, 2015Not Determined
25833429Create StudySynchronization, non-linear dynamics and low-frequency fluctuations: analogy between spontaneous brain activity and networked single-transistor chaotic oscillators.Chaos (Woodbury, N.Y.)Minati, Ludovico; Chiesa, Pietro; Tabarelli, Davide; D'Incerti, Ludovico; Jovicich, JorgeMarch 1, 2015Not Determined
25828567Create StudyA Major Human White Matter Pathway Between Dorsal and Ventral Visual Cortex.Cerebral cortex (New York, N.Y. : 1991)Takemura, Hiromasa; Rokem, Ariel; Winawer, Jonathan; Yeatman, Jason D; Wandell, Brian A; Pestilli, FrancoMay 1, 2016Not Determined
25764254Create StudyMagnetoencephalography in the study of brain dynamics.Functional neurologyPizzella, Vittorio; Marzetti, Laura; Della Penna, Stefania; de Pasquale, Francesco; Zappasodi, Filippo; Romani, Gian LucaOctober 1, 2014Not Determined
25747917Create StudyHeritability of fractional anisotropy in human white matter: a comparison of Human Connectome Project and ENIGMA-DTI data.NeuroImageKochunov, Peter; Jahanshad, Neda; Marcus, Daniel; Winkler, Anderson; Sprooten, Emma; Nichols, Thomas E; Wright, Susan N; Hong, L Elliot; Patel, Binish; Behrens, Timothy; Jbabdi, Saad; Andersson, Jesper; Lenglet, Christophe; Yacoub, Essa; Moeller, Steen; Auerbach, Eddie; Ugurbil, Kamil; Sotiropoulos, Stamatios N; Brouwer, Rachel M; Landman, Bennett; Lemaitre, Hervé; den Braber, Anouk; Zwiers, Marcel P; Ritchie, Stuart; van Hulzen, Kimm; Almasy, Laura; Curran, Joanne; deZubicaray, Greig I; Duggirala, Ravi; Fox, Peter; Martin, Nicholas G; McMahon, Katie L; Mitchell, Braxton; Olvera, Rene L; Peterson, Charles; Starr, John; Sussmann, Jessika; Wardlaw, Joanna; Wright, Margie; Boomsma, Dorret I; Kahn, Rene; de Geus, Eco J C; Williamson, Douglas E; Hariri, Ahmad; van 't Ent, Dennis; Bastin, Mark E; McIntosh, Andrew; Deary, Ian J; Hulshoff Pol, Hilleke E; Blangero, John; Thompson, Paul M; Glahn, David C; Van Essen, David CMay 1, 2015Not Determined
25737822Create StudyParcellating connectivity in spatial maps.PeerJBaldassano, Christopher; Beck, Diane M; Fei-Fei, LiJanuary 1, 2015Not Determined
25725468Create StudyCortical thickness gradients in structural hierarchies.NeuroImageWagstyl, Konrad; Ronan, Lisa; Goodyer, Ian M; Fletcher, Paul CMay 1, 2015Not Determined
25675487Create StudyMassively expedited genome-wide heritability analysis (MEGHA).Proceedings of the National Academy of Sciences of the United States of AmericaGe, Tian; Nichols, Thomas E; Lee, Phil H; Holmes, Avram J; Roffman, Joshua L; Buckner, Randy L; Sabuncu, Mert R; Smoller, Jordan WFebruary 24, 2015Not Determined
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25600633Create StudyA kernel machine method for detecting effects of interaction between multidimensional variable sets: an imaging genetics application.NeuroImageGe, Tian; Nichols, Thomas E; Ghosh, Debashis; Mormino, Elizabeth C; Smoller, Jordan W; Sabuncu, Mert R; Alzheimer's Disease Neuroimaging InitiativeApril 1, 2015Not Determined
25598050Create StudyLarge-scale probabilistic functional modes from resting state fMRI.NeuroImageHarrison, Samuel J; Woolrich, Mark W; Robinson, Emma C; Glasser, Matthew F; Beckmann, Christian F; Jenkinson, Mark; Smith, Stephen MApril 1, 2015Not Determined
25568119Create StudySpatial and temporal characteristics of error-related activity in the human brain.The Journal of neuroscience : the official journal of the Society for NeuroscienceNeta, Maital; Miezin, Francis M; Nelson, Steven M; Dubis, Joseph W; Dosenbach, Nico U F; Schlaggar, Bradley L; Petersen, Steven EJanuary 7, 2015Not Determined
25558465Create StudyImpact of family structure and common environment on heritability estimation for neuroimaging genetics studies using Sequential Oligogenic Linkage Analysis Routines.Journal of medical imaging (Bellingham, Wash.)Koran, Mary Ellen; Thornton-Wells, Tricia A; Jahanshad, Neda; Glahn, David C; Thompson, Paul M; Blangero, John; Nichols, Thomas E; Kochunov, Peter; Landman, Bennett AJune 27, 2014Not Determined
25533337Create StudyContrast enhancement by combining T1- and T2-weighted structural brain MR Images.Magnetic resonance in medicineMisaki, Masaya; Savitz, Jonathan; Zotev, Vadim; Phillips, Raquel; Yuan, Han; Young, Kymberly D; Drevets, Wayne C; Bodurka, JerzyDecember 1, 2015Not Determined
25532167Create StudySimultaneous multi-scale diffusion estimation and tractography guided by entropy spectrum pathways.IEEE transactions on medical imagingGalinsky, Vitaly L; Frank, Lawrence RMay 1, 2015Not Determined
25504834Create StudyExploring spatiotemporal network transitions in task functional MRI.Human brain mappingScott, Gregory; Hellyer, Peter J; Hampshire, Adam; Leech, RobertApril 1, 2015Not Determined
25462696Create StudyEvaluation of highly accelerated simultaneous multi-slice EPI for fMRI.NeuroImageChen, L; T Vu, A; Xu, J; Moeller, S; Ugurbil, K; Yacoub, E; Feinberg, D AJanuary 1, 2015Not Determined
25462690Create StudyTheoretical and experimental evaluation of multi-band EPI for high-resolution whole brain pCASL Imaging.NeuroImageLi, Xiufeng; Wang, Dingxin; Auerbach, Edward J; Moeller, Steen; Ugurbil, Kamil; Metzger, Gregory JFebruary 1, 2015Not Determined
25380333Create StudyToward a multisubject analysis of neural connectivity.Neural computationOates, C J; Costa, L; Nichols, T EJanuary 1, 2015Not Determined
25320808Create StudyProbabilistic shortest path tractography in DTI using Gaussian Process ODE solvers.Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted InterventionSchober, Michael; Kasenburg, Niklas; Feragen, Aasa; Hennig, Philipp; Hauberg, SorenJanuary 1, 2014Not Determined
25320803Create StudyImage quality transfer via random forest regression: applications in diffusion MRI.Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted InterventionAlexander, Daniel C; Zikic, Darko; Zhang, Jiaying; Zhang, Hui; Criminisi, AntonioJanuary 1, 2014Not Determined
25320798Create StudyDeriving a multi-subject functional-connectivity atlas to inform connectome estimation.Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted InterventionPhlypo, Ronald; Thirion, Bertrand; Varoquaux, GaëlJanuary 1, 2014Not Determined
25318624Create StudyNormal relationship of the cervicomedullary junction with the obex and olivary bodies: a comparison of cadaveric dissection and in vivo diffusion tensor imaging.Surgical and radiologic anatomy : SRAMiddlebrooks, Erik H; Yagmurlu, Kaan; Bennett, Jeffrey A; Bidari, SharatchandraJuly 1, 2015Not Determined
25316338Create StudyGeneration and Evaluation of a Cortical Area Parcellation from Resting-State Correlations.Cerebral cortex (New York, N.Y. : 1991)Gordon, Evan M; Laumann, Timothy O; Adeyemo, Babatunde; Huckins, Jeremy F; Kelley, William M; Petersen, Steven EJanuary 1, 2016Not Determined
25252277Create StudyBrain activity: connectivity, sparsity, and mutual information.IEEE transactions on medical imagingCassidy, Ben; Rae, Caroline; Solo, VictorApril 1, 2015Not Determined
25194848Create StudyEvaluation and statistical inference for human connectomes.Nature methodsPestilli, Franco; Yeatman, Jason D; Rokem, Ariel; Kay, Kendrick N; Wandell, Brian AOctober 1, 2014Not Determined
25192576Create StudySemiautomatic segmentation of brain subcortical structures from high-field MRI.IEEE journal of biomedical and health informaticsKim, Jinyoung; Lenglet, Christophe; Duchin, Yuval; Sapiro, Guillermo; Harel, NoamSeptember 1, 2014Not Determined
25191259Create StudySimulated rich club lesioning in brain networks: a scaffold for communication and integration?Frontiers in human neurosciencede Reus, Marcel A; van den Heuvel, Martijn PJanuary 1, 2014Not Determined
25174814Create StudyEffective connectivity during animacy perception--dynamic causal modelling of Human Connectome Project data.Scientific reportsHillebrandt, Hauke; Friston, Karl J; Blakemore, Sarah-JayneSeptember 1, 2014Not Determined
25163490Create StudyBehavioral relevance of the dynamics of the functional brain connectome.Brain connectivityJia, Hao; Hu, Xiaoping; Deshpande, GopikrishnaNovember 1, 2014Not Determined
25109526Create StudyMulti-tissue constrained spherical deconvolution for improved analysis of multi-shell diffusion MRI data.NeuroImageJeurissen, Ben; Tournier, Jacques-Donald; Dhollander, Thijs; Connelly, Alan; Sijbers, JanDecember 1, 2014Not Determined
25108182Create StudyNon-Negative Spherical Deconvolution (NNSD) for estimation of fiber Orientation Distribution Function in single-/multi-shell diffusion MRI.NeuroImageCheng, Jian; Deriche, Rachid; Jiang, Tianzi; Shen, Dinggang; Yap, Pew-ThianNovember 1, 2014Not Determined
25105832Create StudyLess noise, more activation: Multiband acquisition schemes for auditory functional MRI.Magnetic resonance in medicineDe Martino, Federico; Moerel, Michelle; Ugurbil, Kamil; Formisano, Elia; Yacoub, EssaAugust 1, 2015Not Determined
25071542Create StudyData dictionary services in XNAT and the Human Connectome Project.Frontiers in neuroinformaticsHerrick, Rick; McKay, Michael; Olsen, Timothy; Horton, William; Florida, Mark; Moore, Charles J; Marcus, Daniel SJanuary 1, 2014Not Determined
25071425Create StudyWhich fMRI clustering gives good brain parcellations?Frontiers in neuroscienceThirion, Bertrand; Varoquaux, Gaël; Dohmatob, Elvis; Poline, Jean-BaptisteJanuary 1, 2014Not Determined
25053375Create StudyA direct amygdala-motor pathway for emotional displays to influence action: A diffusion tensor imaging study.Human brain mappingGrèzes, Julie; Valabrègue, Romain; Gholipour, Bahar; Chevallier, CoralieDecember 1, 2014Not Determined
25023958Create StudyFast computation of voxel-level brain connectivity maps from resting-state functional MRI using l₁-norm as approximation of Pearson''s temporal correlation: proof-of-concept and example vector hardware implementation.Medical engineering & physicsMinati, Ludovico; Zacà, Domenico; D'Incerti, Ludovico; Jovicich, JorgeSeptember 1, 2014Not Determined
24994817Create StudyHigh-Resolution Mapping of Myeloarchitecture In Vivo: Localization of Auditory Areas in the Human Brain.Cerebral cortex (New York, N.Y. : 1991)De Martino, Federico; Moerel, Michelle; Xu, Junqian; van de Moortele, Pierre-Francois; Ugurbil, Kamil; Goebel, Rainer; Yacoub, Essa; Formisano, EliaOctober 1, 2015Not Determined
24991964Create StudyIntrinsic and task-evoked network architectures of the human brain.NeuronCole, Michael W; Bassett, Danielle S; Power, Jonathan D; Braver, Todd S; Petersen, Steven EJuly 2, 2014Not Determined
24988196Create StudyStochastic blockmodeling of the modules and core of the Caenorhabditis elegans connectome.PloS onePavlovic, Dragana M; Vértes, Petra E; Bullmore, Edward T; Schafer, William R; Nichols, Thomas EJanuary 1, 2014Not Determined
24982140Create StudyTime-resolved resting-state brain networks.Proceedings of the National Academy of Sciences of the United States of AmericaZalesky, Andrew; Fornito, Alex; Cocchi, Luca; Gollo, Leonardo L; Breakspear, MichaelJuly 15, 2014Not Determined
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24959130Create StudyNetwork complexity as a measure of information processing across resting-state networks: evidence from the Human Connectome Project.Frontiers in human neuroscienceMcDonough, Ian M; Nashiro, KaoruJanuary 1, 2014Not Determined
24939340Create StudyMSM: a new flexible framework for Multimodal Surface Matching.NeuroImageRobinson, Emma C; Jbabdi, Saad; Glasser, Matthew F; Andersson, Jesper; Burgess, Gregory C; Harms, Michael P; Smith, Stephen M; Van Essen, David C; Jenkinson, MarkOctober 15, 2014Not Determined
24887509Create StudySeparable responses to error, ambiguity, and reaction time in cingulo-opercular task control regions.NeuroImageNeta, Maital; Schlaggar, Bradley L; Petersen, Steven EOctober 1, 2014Not Determined
24887067Create StudySpatial dependencies between large-scale brain networks.PloS oneLeech, Robert; Scott, Gregory; Carhart-Harris, Robin; Turkheimer, Federico; Taylor-Robinson, Simon D; Sharp, David JJanuary 1, 2014Not Determined
24885374Create StudyStudy protocol: The Whitehall II imaging sub-study.BMC psychiatryFilippini, Nicola; Zsoldos, Enikő; Haapakoski, Rita; Sexton, Claire E; Mahmood, Abda; Allan, Charlotte L; Topiwala, Anya; Valkanova, Vyara; Brunner, Eric J; Shipley, Martin J; Auerbach, Edward; Moeller, Steen; Uğurbil, Kâmil; Xu, Junqian; Yacoub, Essa; Andersson, Jesper; Bijsterbosch, Janine; Clare, Stuart; Griffanti, Ludovica; Hess, Aaron T; Jenkinson, Mark; Miller, Karla L; Salimi-Khorshidi, Gholamreza; Sotiropoulos, Stamatios N; Voets, Natalie L; Smith, Stephen M; Geddes, John R; Singh-Manoux, Archana; Mackay, Clare E; Kivimäki, Mika; Ebmeier, Klaus PMay 30, 2014Not Determined
24875392Create StudyTest-retest reliabilities of resting-state FMRI measurements in human brain functional connectomics: a systems neuroscience perspective.Neuroscience and biobehavioral reviewsZuo, Xi-Nian; Xing, Xiu-XiaSeptember 1, 2014Not Determined
24836011Create StudyA high performance 3D cluster-based test of unsmoothed fMRI data.NeuroImageLi, Huanjie; Nickerson, Lisa D; Xiong, Jinhu; Zou, Qihong; Fan, Yang; Ma, Yajun; Shi, Tingqi; Ge, Jianqiao; Gao, Jia-HongSeptember 1, 2014Not Determined
24686229Create StudyMagnetic resonance imaging at ultrahigh fields.IEEE transactions on bio-medical engineeringUgurbil, KamilMay 1, 2014Not Determined
24668169Create StudyFast transient networks in spontaneous human brain activity.eLifeBaker, Adam P; Brookes, Matthew J; Rezek, Iead A; Smith, Stephen M; Behrens, Timothy; Probert Smith, Penny J; Woolrich, MarkMarch 25, 2014Not Determined
24657355Create StudyICA-based artefact removal and accelerated fMRI acquisition for improved resting state network imaging.NeuroImageGriffanti, Ludovica; Salimi-Khorshidi, Gholamreza; Beckmann, Christian F; Auerbach, Edward J; Douaud, Gwenaëlle; Sexton, Claire E; Zsoldos, Enikő; Ebmeier, Klaus P; Filippini, Nicola; Mackay, Clare E; Moeller, Steen; Xu, Junqian; Yacoub, Essa; Baselli, Giuseppe; Ugurbil, Kamil; Miller, Karla L; Smith, Stephen MJuly 15, 2014Not Determined
24505650Create StudyIdentifying group-wise consistent white matter landmarks via novel fiber shape descriptor.Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted InterventionChen, Hanbo; Zhang, Tuo; Liu, TianmingJanuary 1, 2013Not Determined
24418509Create StudyThird order spectral analysis robust to mixing artifacts for mapping cross-frequency interactions in EEG/MEG.NeuroImageChella, F; Marzetti, L; Pizzella, V; Zappasodi, F; Nolte, GMay 1, 2014Not Determined
24417550Create StudyFunctional connectivity-based parcellation of the human sensorimotor cortex.The European journal of neuroscienceLong, Xiangyu; Goltz, Dominique; Margulies, Daniel S; Nierhaus, Till; Villringer, ArnoApril 1, 2014Not Determined
24389422Create StudyAutomatic denoising of functional MRI data: combining independent component analysis and hierarchical fusion of classifiers.NeuroImageSalimi-Khorshidi, Gholamreza; Douaud, Gwenaëlle; Beckmann, Christian F; Glasser, Matthew F; Griffanti, Ludovica; Smith, Stephen MApril 15, 2014Not Determined
24338816Create StudyEstimation of the CSA-ODF using Bayesian compressed sensing of multi-shell HARDI.Magnetic resonance in medicineDuarte-Carvajalino, Julio M; Lenglet, Christophe; Xu, Junqian; Yacoub, Essa; Ugurbil, Kamil; Moeller, Steen; Carin, Lawrence; Sapiro, GuillermoNovember 1, 2014Not Determined
24238796Create StudyFunctional connectomics from resting-state fMRI.Trends in cognitive sciencesSmith, Stephen M; Vidaurre, Diego; Beckmann, Christian F; Glasser, Matthew F; Jenkinson, Mark; Miller, Karla L; Nichols, Thomas E; Robinson, Emma C; Salimi-Khorshidi, Gholamreza; Woolrich, Mark W; Barch, Deanna M; Uğurbil, Kamil; Van Essen, David CDecember 1, 2013Not Determined
24185018Create StudyEstimates of segregation and overlap of functional connectivity networks in the human cerebral cortex.NeuroImageYeo, B T Thomas; Krienen, Fenna M; Chee, Michael W L; Buckner, Randy LMarch 1, 2014Not Determined
24183027Create StudyCartography and connectomes.NeuronVan Essen, David COctober 30, 2013Not Determined
24165833Create StudyAnalysis of cortical shape in children with simplex autism.Cerebral cortex (New York, N.Y. : 1991)Dierker, Donna L; Feczko, Eric; Pruett Jr, John R; Petersen, Steven E; Schlaggar, Bradley L; Constantino, John N; Harwell, John W; Coalson, Timothy S; Van Essen, David CApril 1, 2015Not Determined
23994314Create StudyMethods to detect, characterize, and remove motion artifact in resting state fMRI.NeuroImagePower, Jonathan D; Mitra, Anish; Laumann, Timothy O; Snyder, Abraham Z; Schlaggar, Bradley L; Petersen, Steven EJanuary 1, 2014Not Determined
23899722Create StudyEvaluation of slice accelerations using multiband echo planar imaging at 3 T.NeuroImageXu, Junqian; Moeller, Steen; Auerbach, Edward J; Strupp, John; Smith, Stephen M; Feinberg, David A; Yacoub, Essa; Uğurbil, KâmilDecember 1, 2013Not Determined
23891400Create StudyNatural scenes viewing alters the dynamics of functional connectivity in the human brain.NeuronBetti, Viviana; Della Penna, Stefania; de Pasquale, Francesco; Mantini, Dante; Marzetti, Laura; Romani, Gian Luca; Corbetta, MaurizioAugust 21, 2013Not Determined
23876247Create StudyAn approach for parcellating human cortical areas using resting-state correlations.NeuroImageWig, Gagan S; Laumann, Timothy O; Petersen, Steven EJune 1, 2014Not Determined
23707675Create StudyGenetics of the connectome.NeuroImageThompson, Paul M; Ge, Tian; Glahn, David C; Jahanshad, Neda; Nichols, Thomas EOctober 15, 2013Not Determined
23707591Create StudyHuman Connectome Project informatics: quality control, database services, and data visualization.NeuroImageMarcus, Daniel S; Harms, Michael P; Snyder, Abraham Z; Jenkinson, Mark; Wilson, J Anthony; Glasser, Matthew F; Barch, Deanna M; Archie, Kevin A; Burgess, Gregory C; Ramaratnam, Mohana; Hodge, Michael; Horton, William; Herrick, Rick; Olsen, Timothy; McKay, Michael; House, Matthew; Hileman, Michael; Reid, Erin; Harwell, John; Coalson, Timothy; Schindler, Jon; Elam, Jennifer S; Curtiss, Sandra W; Van Essen, David C; WU-Minn HCP ConsortiumOctober 15, 2013Not Determined
23702419Create StudyAdding dynamics to the Human Connectome Project with MEG.NeuroImageLarson-Prior, L J; Oostenveld, R; Della Penna, S; Michalareas, G; Prior, F; Babajani-Feremi, A; Schoffelen, J-M; Marzetti, L; de Pasquale, F; Di Pompeo, F; Stout, J; Woolrich, M; Luo, Q; Bucholz, R; Fries, P; Pizzella, V; Romani, G L; Corbetta, M; Snyder, A Z; WU-Minn HCP ConsortiumOctober 15, 2013Not Determined
23702418Create StudyAdvances in diffusion MRI acquisition and processing in the Human Connectome Project.NeuroImageSotiropoulos, Stamatios N; Jbabdi, Saad; Xu, Junqian; Andersson, Jesper L; Moeller, Steen; Auerbach, Edward J; Glasser, Matthew F; Hernandez, Moises; Sapiro, Guillermo; Jenkinson, Mark; Feinberg, David A; Yacoub, Essa; Lenglet, Christophe; Van Essen, David C; Ugurbil, Kamil; Behrens, Timothy E J; WU-Minn HCP ConsortiumOctober 15, 2013Not Determined
23702417Create StudyPushing spatial and temporal resolution for functional and diffusion MRI in the Human Connectome Project.NeuroImageUğurbil, Kamil; Xu, Junqian; Auerbach, Edward J; Moeller, Steen; Vu, An T; Duarte-Carvajalino, Julio M; Lenglet, Christophe; Wu, Xiaoping; Schmitter, Sebastian; Van de Moortele, Pierre Francois; Strupp, John; Sapiro, Guillermo; De Martino, Federico; Wang, Dingxin; Harel, Noam; Garwood, Michael; Chen, Liyong; Feinberg, David A; Smith, Stephen M; Miller, Karla L; Sotiropoulos, Stamatios N; Jbabdi, Saad; Andersson, Jesper L R; Behrens, Timothy E J; Glasser, Matthew F; Van Essen, David C; Yacoub, Essa; WU-Minn HCP ConsortiumOctober 15, 2013Not Determined
23702415Create StudyResting-state fMRI in the Human Connectome Project.NeuroImageSmith, Stephen M; Beckmann, Christian F; Andersson, Jesper; Auerbach, Edward J; Bijsterbosch, Janine; Douaud, Gwenaëlle; Duff, Eugene; Feinberg, David A; Griffanti, Ludovica; Harms, Michael P; Kelly, Michael; Laumann, Timothy; Miller, Karla L; Moeller, Steen; Petersen, Steve; Power, Jonathan; Salimi-Khorshidi, Gholamreza; Snyder, Abraham Z; Vu, An T; Woolrich, Mark W; Xu, Junqian; Yacoub, Essa; Uğurbil, Kamil; Van Essen, David C; Glasser, Matthew F; WU-Minn HCP ConsortiumOctober 15, 2013Not Determined
23684880Create StudyThe WU-Minn Human Connectome Project: an overview.NeuroImageVan Essen, David C; Smith, Stephen M; Barch, Deanna M; Behrens, Timothy E J; Yacoub, Essa; Ugurbil, Kamil; WU-Minn HCP ConsortiumOctober 15, 2013Not Determined
23684877Create StudyFunction in the human connectome: task-fMRI and individual differences in behavior.NeuroImageBarch, Deanna M; Burgess, Gregory C; Harms, Michael P; Petersen, Steven E; Schlaggar, Bradley L; Corbetta, Maurizio; Glasser, Matthew F; Curtiss, Sandra; Dixit, Sachin; Feldt, Cindy; Nolan, Dan; Bryant, Edward; Hartley, Tucker; Footer, Owen; Bjork, James M; Poldrack, Russ; Smith, Steve; Johansen-Berg, Heidi; Snyder, Abraham Z; Van Essen, David C; WU-Minn HCP ConsortiumOctober 15, 2013Not Determined
23668970Create StudyThe minimal preprocessing pipelines for the Human Connectome Project.NeuroImageGlasser, Matthew F; Sotiropoulos, Stamatios N; Wilson, J Anthony; Coalson, Timothy S; Fischl, Bruce; Andersson, Jesper L; Xu, Junqian; Jbabdi, Saad; Webster, Matthew; Polimeni, Jonathan R; Van Essen, David C; Jenkinson, Mark; WU-Minn HCP ConsortiumOctober 15, 2013Not Determined
23658616Create StudyAccelerating fibre orientation estimation from diffusion weighted magnetic resonance imaging using GPUs.PloS oneHernández, Moisés; Guerrero, Ginés D; Cecilia, José M; García, José M; Inuggi, Alberto; Jbabdi, Saad; Behrens, Timothy E J; Sotiropoulos, Stamatios NJanuary 1, 2013Not Determined
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Penn Emotion Recognition Task-40 info icon
7407/15/2019
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Wechsler Intelligence Scale for Children info icon
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Wechsler Preschool Primary Scale Intelligence (WPPSI) info icon
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7407/15/2019
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Associated Studies

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